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For: Xie Y, Xu L, Wang Y, Fan L, Chen Y, Tang M, Luo X, Liu L. Comparative proteomic analysis provides insight into a complex regulatory network of taproot formation in radish (Raphanus sativus L.). Hortic Res 2018;5:51. [PMID: 30302255 PMCID: PMC6165848 DOI: 10.1038/s41438-018-0057-7] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2017] [Revised: 02/22/2018] [Accepted: 05/30/2018] [Indexed: 05/15/2023]
Number Cited by Other Article(s)
1
Frolova N, Gorbach D, Ihling C, Bilova T, Orlova A, Lukasheva E, Fedoseeva K, Dodueva I, Lutova LA, Frolov A. Proteome and Metabolome Alterations in Radish (Raphanus sativus L.) Seedlings Induced by Inoculation with Agrobacterium tumefaciens. Biomolecules 2025;15:290. [PMID: 40001593 PMCID: PMC11852571 DOI: 10.3390/biom15020290] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2024] [Revised: 02/07/2025] [Accepted: 02/11/2025] [Indexed: 02/27/2025]  Open
2
Meng G, Yong M, Zhang Z, Zhang Y, Wang Y, Xiong A, Su X. Exogenous gibberellin suppressed taproot secondary thickening by inhibiting the formation and maintenance of vascular cambium in radish (Raphanus sativus L.). FRONTIERS IN PLANT SCIENCE 2024;15:1395999. [PMID: 39328795 PMCID: PMC11424454 DOI: 10.3389/fpls.2024.1395999] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/05/2024] [Accepted: 08/26/2024] [Indexed: 09/28/2024]
3
Li C, Mao B, Wang K, Xu L, Fan L, Wang Y, Li Y, Ma Y, Wang L, Liu L. RsERF40 contributes to cold stress tolerance and cell expansion of taproot in radish (Raphanus sativus L.). HORTICULTURE RESEARCH 2023;10:uhad013. [PMID: 36968181 PMCID: PMC10031735 DOI: 10.1093/hr/uhad013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/07/2022] [Accepted: 01/25/2023] [Indexed: 06/18/2023]
4
Kong Y, Wang G, Tang H, Yang J, Yang Y, Wang J, Li G, Li Y, Yuan J. Multi-omics analysis provides insight into the phytotoxicity of chicken manure and cornstalk on seed germination. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023;861:160611. [PMID: 36460104 DOI: 10.1016/j.scitotenv.2022.160611] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2022] [Revised: 11/21/2022] [Accepted: 11/27/2022] [Indexed: 06/17/2023]
5
Dong J, Wang Y, Xu L, Li B, Wang K, Ying J, He Q, Liu L. RsCLE22a regulates taproot growth through an auxin signaling-related pathway in radish (Raphanus sativus L.). JOURNAL OF EXPERIMENTAL BOTANY 2023;74:233-250. [PMID: 36239471 DOI: 10.1093/jxb/erac406] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/08/2022] [Accepted: 10/12/2022] [Indexed: 06/16/2023]
6
Transcriptomic Analysis of Distal Parts of Roots Reveals Potentially Important Mechanisms Contributing to Limited Flooding Tolerance of Canola (Brassica napus) Plants. Int J Mol Sci 2022;23:ijms232415469. [PMID: 36555110 PMCID: PMC9779561 DOI: 10.3390/ijms232415469] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2022] [Revised: 11/29/2022] [Accepted: 12/02/2022] [Indexed: 12/12/2022]  Open
7
Xiao Z, Fan N, Wang X, Ji H, Yue L, He F, Wang Z. Earthworms Drive the Effect of La2O3 Nanoparticles on Radish Taproot Metabolite Profiles and Rhizosphere Microbial Communities. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2022;56:17385-17395. [PMID: 36351052 DOI: 10.1021/acs.est.2c05828] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
8
Zheng W, Shi J, Zhu ZY, Jin P, Chen JH, Zhang L, Zhang E, Lin T, Zhu ZJ, Zang YX, Wu JG. Transcriptomic analysis of succulent stem development of Chinese kale (Brassica oleracea var. alboglabra Bailey) and its synthetic allotetraploid via RNA sequencing. FRONTIERS IN PLANT SCIENCE 2022;13:1004590. [PMID: 36340371 PMCID: PMC9630916 DOI: 10.3389/fpls.2022.1004590] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/29/2022] [Accepted: 09/26/2022] [Indexed: 06/16/2023]
9
Nuruzzaman M, Sato M, Okamoto S, Hoque M, Shea DJ, Fujimoto R, Shimizu M, Fukai E, Okazaki K. Comparative transcriptome analysis during tuberous stem formation in Kohlrabi (B. oleracea var. gongylodes) at early growth periods (seedling stages). PHYSIOLOGIA PLANTARUM 2022;174:e13770. [PMID: 36018597 DOI: 10.1111/ppl.13770] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/19/2021] [Revised: 08/18/2022] [Accepted: 08/22/2022] [Indexed: 06/15/2023]
10
Cai Z, Cai Z, Huang J, Wang A, Ntambiyukuri A, Chen B, Zheng G, Li H, Huang Y, Zhan J, Xiao D, He L. Transcriptomic analysis of tuberous root in two sweet potato varieties reveals the important genes and regulatory pathways in tuberous root development. BMC Genomics 2022;23:473. [PMID: 35761189 PMCID: PMC9235109 DOI: 10.1186/s12864-022-08670-x] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2022] [Accepted: 05/30/2022] [Indexed: 11/16/2022]  Open
11
Chen P, Yang R, Bartels D, Dong T, Duan H. Roles of Abscisic Acid and Gibberellins in Stem/Root Tuber Development. Int J Mol Sci 2022;23:ijms23094955. [PMID: 35563355 PMCID: PMC9102914 DOI: 10.3390/ijms23094955] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2022] [Revised: 04/26/2022] [Accepted: 04/27/2022] [Indexed: 02/06/2023]  Open
12
Kanjevac M, Jakovljević D, Todorović M, Stanković M, Ćurčić S, Bojović B. Improvement of Germination and Early Growth of Radish (Raphanus sativus L.) through Modulation of Seed Metabolic Processes. PLANTS (BASEL, SWITZERLAND) 2022;11:757. [PMID: 35336639 PMCID: PMC8949023 DOI: 10.3390/plants11060757] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/23/2022] [Revised: 03/09/2022] [Accepted: 03/10/2022] [Indexed: 06/14/2023]
13
Henschel JM, Brito FAL, Pimenta TM, Picoli EAT, Zsögön A, Ribeiro DM. Irradiance-regulated biomass allocation in Raphanus sativus plants depends on gibberellin biosynthesis. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021;168:43-52. [PMID: 34619597 DOI: 10.1016/j.plaphy.2021.09.043] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2021] [Revised: 09/21/2021] [Accepted: 09/30/2021] [Indexed: 06/13/2023]
14
Ji G, Xu Z, Fan X, Zhou Q, Yu Q, Liu X, Liao S, Feng B, Wang T. Identification of a major and stable QTL on chromosome 5A confers spike length in wheat (Triticum aestivum L.). MOLECULAR BREEDING : NEW STRATEGIES IN PLANT IMPROVEMENT 2021;41:56. [PMID: 37309397 PMCID: PMC10236030 DOI: 10.1007/s11032-021-01249-6] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/28/2021] [Accepted: 08/29/2021] [Indexed: 06/14/2023]
15
Kang L, Qian L, Zheng M, Chen L, Chen H, Yang L, You L, Yang B, Yan M, Gu Y, Wang T, Schiessl SV, An H, Blischak P, Liu X, Lu H, Zhang D, Rao Y, Jia D, Zhou D, Xiao H, Wang Y, Xiong X, Mason AS, Chris Pires J, Snowdon RJ, Hua W, Liu Z. Genomic insights into the origin, domestication and diversification of Brassica juncea. Nat Genet 2021;53:1392-1402. [PMID: 34493868 PMCID: PMC8423626 DOI: 10.1038/s41588-021-00922-y] [Citation(s) in RCA: 63] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2020] [Accepted: 07/23/2021] [Indexed: 02/07/2023]
16
Xie Y, Ying J, Tang M, Wang Y, Xu L, Liu M, Liu L. Genome-wide identification of AUX/IAA in radish and functional characterization of RsIAA33 gene during taproot thickening. Gene 2021;795:145782. [PMID: 34146634 DOI: 10.1016/j.gene.2021.145782] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2021] [Revised: 05/17/2021] [Accepted: 06/14/2021] [Indexed: 11/27/2022]
17
Xiao Z, Yue L, Wang C, Chen F, Ding Y, Liu Y, Cao X, Chen Z, Rasmann S, Wang Z. Downregulation of the photosynthetic machinery and carbon storage signaling pathways mediate La2O3 nanoparticle toxicity on radish taproot formation. JOURNAL OF HAZARDOUS MATERIALS 2021;411:124971. [PMID: 33429308 DOI: 10.1016/j.jhazmat.2020.124971] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/20/2020] [Revised: 12/18/2020] [Accepted: 12/23/2020] [Indexed: 06/12/2023]
18
Zhang HP, Su Y, Yu Q, Qin GH. Quantitative proteomic analysis of pear (Pyrus pyrifolia cv. "Hosui") flesh provides novel insights about development and quality characteristics of fruit. PLANTA 2021;253:69. [PMID: 33599839 DOI: 10.1007/s00425-021-03585-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2020] [Accepted: 02/01/2021] [Indexed: 06/12/2023]
19
Wu Y, Zhang S, Zhang H, Li F, Li G, Fan C, Sun R, Zhang S. QTL Mapping and Candidate Gene Identification of Swollen Root Formation in Turnip. Int J Mol Sci 2021;22:ijms22020653. [PMID: 33440867 PMCID: PMC7826719 DOI: 10.3390/ijms22020653] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2020] [Revised: 12/29/2020] [Accepted: 01/07/2021] [Indexed: 12/17/2022]  Open
20
Ma Y, Xie Y, Ha R, Cao B, Song L. Effects of Elevated CO2 on Photosynthetic Accumulation, Sucrose Metabolism-Related Enzymes, and Genes Identification in Goji Berry (Lycium barbarum L.). FRONTIERS IN PLANT SCIENCE 2021;12:643555. [PMID: 33777078 PMCID: PMC7991576 DOI: 10.3389/fpls.2021.643555] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/18/2020] [Accepted: 02/16/2021] [Indexed: 05/14/2023]
21
Xie Y, Ying J, Xu L, Wang Y, Dong J, Chen Y, Tang M, Li C, M'mbone Muleke E, Liu L. Genome-wide sRNA and mRNA transcriptomic profiling insights into dynamic regulation of taproot thickening in radish (Raphanus sativus L.). BMC PLANT BIOLOGY 2020;20:373. [PMID: 32770962 PMCID: PMC7414755 DOI: 10.1186/s12870-020-02585-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2019] [Accepted: 07/29/2020] [Indexed: 05/03/2023]
22
Characterization of the OFP Gene Family and its Putative Involvement of Tuberous Root Shape in Radish. Int J Mol Sci 2020;21:ijms21041293. [PMID: 32075122 PMCID: PMC7072887 DOI: 10.3390/ijms21041293] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2020] [Revised: 02/07/2020] [Accepted: 02/10/2020] [Indexed: 12/21/2022]  Open
23
Li XJ, Yang JL, Hao B, Lu YC, Qian ZL, Li Y, Ye S, Tang JR, Chen M, Long GQ, Zhao Y, Zhang GH, Chen JW, Fan W, Yang SC. Comparative transcriptome and metabolome analyses provide new insights into the molecular mechanisms underlying taproot thickening in Panax notoginseng. BMC PLANT BIOLOGY 2019;19:451. [PMID: 31655543 PMCID: PMC6815444 DOI: 10.1186/s12870-019-2067-5] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/04/2019] [Accepted: 10/02/2019] [Indexed: 05/19/2023]
24
Zhou A, Sun H, Dai S, Feng S, Zhang J, Gong S, Wang J. Identification of Transcription Factors Involved in the Regulation of Flowering in Adonis Amurensis Through Combined RNA-seq Transcriptomics and iTRAQ Proteomics. Genes (Basel) 2019;10:genes10040305. [PMID: 31003538 PMCID: PMC6523232 DOI: 10.3390/genes10040305] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2019] [Revised: 04/07/2019] [Accepted: 04/15/2019] [Indexed: 12/20/2022]  Open
25
Ondrasek G, Clode PL, Kilburn MR, Guagliardo P, Romić D, Rengel Z. Zinc and Cadmium Mapping in the Apical Shoot and Hypocotyl Tissues of Radish by High-Resolution Secondary Ion Mass Spectrometry (NanoSIMS) after Short-Term Exposure to Metal Contamination. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2019;16:ijerph16030373. [PMID: 30699929 PMCID: PMC6388160 DOI: 10.3390/ijerph16030373] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/07/2018] [Revised: 01/19/2019] [Accepted: 01/23/2019] [Indexed: 12/19/2022]
26
Transcriptome-based gene expression profiling of diploid radish (Raphanus sativus L.) and the corresponding autotetraploid. Mol Biol Rep 2018;46:933-945. [PMID: 30560406 DOI: 10.1007/s11033-018-4549-1] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2018] [Accepted: 11/30/2018] [Indexed: 12/11/2022]
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