1
|
Tanaka R, Portugues R. On analogies in vertebrate and insect visual systems. Nat Rev Neurosci 2025:10.1038/s41583-025-00932-3. [PMID: 40410391 DOI: 10.1038/s41583-025-00932-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 05/01/2025] [Indexed: 05/25/2025]
Abstract
Despite the large evolutionary distance between vertebrates and insects, the visual systems of these two taxa bear remarkable similarities that have been noted repeatedly, including by pioneering neuroanatomists such as Ramón y Cajal. Fuelled by the advent of transgenic approaches in neuroscience, studies of visual system anatomy and function in both vertebrates and insects have made dramatic progress during the past two decades, revealing even deeper analogies between their visual systems than were noted by earlier observers. Such across-taxa comparisons have tended to focus on either elementary motion detection or relatively peripheral layers of the visual systems. By contrast, the aims of this Review are to expand the scope of this comparison to pathways outside visual motion detection, as well as to deeper visual structures. To achieve these aims, we primarily discuss examples from recent work in larval zebrafish (Danio rerio) and the fruitfly (Drosophila melanogaster), a pair of genetically tractable model organisms with comparatively sized, small brains. In particular, we argue that the brains of both vertebrates and insects are equipped with third-order visual structures that specialize in shared behavioural tasks, including postural and course stabilization, approach and avoidance, and some other behaviours. These wider analogies between the two distant taxa highlight shared behavioural goals and associated evolutionary constraints and suggest that studies on vertebrate and insect vision have a lot to inspire each other.
Collapse
Affiliation(s)
- Ryosuke Tanaka
- Institute of Neuroscience, Technical University of Munich, Munich, Germany.
| | - Ruben Portugues
- Institute of Neuroscience, Technical University of Munich, Munich, Germany.
- Munich Cluster of Systems Neurology (SyNergy), Munich, Germany.
- Max Planck Fellow Group - Mechanisms of Cognition, MPI Psychiatry, Munich, Germany.
- Bernstein Center for Computational Neuroscience Munich, Munich, Germany.
| |
Collapse
|
2
|
Wang H, Zhang G, Wang Y, Cao Z, Cao S, Wei B, Liu Y, Liénard MA, Niu C. Specific transcription factors regulate the expression of Rh6 in Bactrocera minax and Bactrocera dorsalis (Diptera: Tephritidae). Int J Biol Macromol 2025; 305:141201. [PMID: 39971049 DOI: 10.1016/j.ijbiomac.2025.141201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2024] [Revised: 02/11/2025] [Accepted: 02/15/2025] [Indexed: 02/21/2025]
Abstract
Color vision is widely used by herbivorous insects to make host location. We have previously demonstrated that the long-wavelength-sensitive (LWS) opsin gene Rhodopsin 6 (Rh6) confers green preference in Bactrocera minax (a specialist) but yellow in B. dorsalis (a generalist). However, the transcriptional regulation underlying Rh6 expression and its association with color preference between these two sister species remains unclear. Here, we cloned the core promoter regions of BmRh6 and BdRh6, and identified the transcription factors (TFs) BmHmx in B. minax and BdPtx1 in B. dorsalis through bioinformatics and transcriptomic analysis. The functional impact of the two TFs on Rh6 transcription was validated using the dual luciferase reporter assays and yeast one-hybrid (Y1H) assays. RNA interference (RNAi)-mediated knockdown of the TFs resulted in significant downregulation of Rh6 expression. Furthermore, silencing of BmHmx eliminated the preference for green in B. minax, while knockdown of BdPtx1 in B. dorsalis led to the loss of yellow preference. Our results elucidate the mechanism underlying transcriptional regulation of Rh6 towards color preferences in tephritids, which also provide new insights into the links between host location and visual ecology in insects.
Collapse
Affiliation(s)
- Haoran Wang
- Hubei Insect Resources Utilization and Sustainable Pest Management Key Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China
| | - Guijian Zhang
- Hubei Insect Resources Utilization and Sustainable Pest Management Key Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China
| | - Yaohui Wang
- Key Laboratory of Biology and Sustainable Management of Plant Diseases and Pests of Anhui Higher Education Institutes, College of Plant Protection, Anhui Agricultural University, Hefei, China
| | - Zhen Cao
- Hubei Insect Resources Utilization and Sustainable Pest Management Key Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China
| | - Shuai Cao
- Hubei Insect Resources Utilization and Sustainable Pest Management Key Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China
| | - Bingbing Wei
- Hubei Insect Resources Utilization and Sustainable Pest Management Key Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China
| | - Yi Liu
- Hubei Insect Resources Utilization and Sustainable Pest Management Key Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China
| | - Marjorie A Liénard
- Laboratory of Molecular Biology of Sensory Systems, GIGA-Research Institute, University of Liège, Liège, Belgium
| | - Changying Niu
- Hubei Insect Resources Utilization and Sustainable Pest Management Key Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China.
| |
Collapse
|
3
|
Nern A, Loesche F, Takemura SY, Burnett LE, Dreher M, Gruntman E, Hoeller J, Huang GB, Januszewski M, Klapoetke NC, Koskela S, Longden KD, Lu Z, Preibisch S, Qiu W, Rogers EM, Seenivasan P, Zhao A, Bogovic J, Canino BS, Clements J, Cook M, Finley-May S, Flynn MA, Hameed I, Fragniere AMC, Hayworth KJ, Hopkins GP, Hubbard PM, Katz WT, Kovalyak J, Lauchie SA, Leonard M, Lohff A, Maldonado CA, Mooney C, Okeoma N, Olbris DJ, Ordish C, Paterson T, Phillips EM, Pietzsch T, Salinas JR, Rivlin PK, Schlegel P, Scott AL, Scuderi LA, Takemura S, Talebi I, Thomson A, Trautman ET, Umayam L, Walsh C, Walsh JJ, Xu CS, Yakal EA, Yang T, Zhao T, Funke J, George R, Hess HF, Jefferis GSXE, Knecht C, Korff W, Plaza SM, Romani S, Saalfeld S, Scheffer LK, Berg S, Rubin GM, Reiser MB. Connectome-driven neural inventory of a complete visual system. Nature 2025; 641:1225-1237. [PMID: 40140576 PMCID: PMC12119369 DOI: 10.1038/s41586-025-08746-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2024] [Accepted: 02/06/2025] [Indexed: 03/28/2025]
Abstract
Vision provides animals with detailed information about their surroundings and conveys diverse features such as colour, form and movement across the visual scene. Computing these parallel spatial features requires a large and diverse network of neurons. Consequently, from flies to humans, visual regions in the brain constitute half its volume. These visual regions often have marked structure-function relationships, with neurons organized along spatial maps and with shapes that directly relate to their roles in visual processing. More than a century of anatomical studies have catalogued in detail cell types in fly visual systems1-3, and parallel behavioural and physiological experiments have examined the visual capabilities of flies. To unravel the diversity of a complex visual system, careful mapping of the neural architecture matched to tools for targeted exploration of this circuitry is essential. Here we present a connectome of the right optic lobe from a male Drosophila melanogaster acquired using focused ion beam milling and scanning electron microscopy. We established a comprehensive inventory of the visual neurons and developed a computational framework to quantify their anatomy. Together, these data establish a basis for interpreting how the shapes of visual neurons relate to spatial vision. By integrating this analysis with connectivity information, neurotransmitter identity and expert curation, we classified the approximately 53,000 neurons into 732 types. These types are systematically described and about half are newly named. Finally, we share an extensive collection of split-GAL4 lines matched to our neuron-type catalogue. Overall, this comprehensive set of tools and data unlocks new possibilities for systematic investigations of vision in Drosophila and provides a foundation for a deeper understanding of sensory processing.
Collapse
Affiliation(s)
- Aljoscha Nern
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Frank Loesche
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Shin-Ya Takemura
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Laura E Burnett
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Marisa Dreher
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | | | - Judith Hoeller
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Gary B Huang
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | | | - Nathan C Klapoetke
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Sanna Koskela
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Kit D Longden
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Zhiyuan Lu
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Stephan Preibisch
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Wei Qiu
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Edward M Rogers
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | | | - Arthur Zhao
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - John Bogovic
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Brandon S Canino
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Jody Clements
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Michael Cook
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | | | - Miriam A Flynn
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Imran Hameed
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Alexandra M C Fragniere
- MRC Laboratory of Molecular Biology, Cambridge, UK
- Department of Zoology, Cambridge University, Cambridge, UK
| | - Kenneth J Hayworth
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | | | - Philip M Hubbard
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - William T Katz
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Julie Kovalyak
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Shirley A Lauchie
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Meghan Leonard
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Alanna Lohff
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Charli A Maldonado
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Caroline Mooney
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Nneoma Okeoma
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Donald J Olbris
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Christopher Ordish
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Tyler Paterson
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Emily M Phillips
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Tobias Pietzsch
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | | | - Patricia K Rivlin
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Philipp Schlegel
- MRC Laboratory of Molecular Biology, Cambridge, UK
- Department of Zoology, Cambridge University, Cambridge, UK
| | - Ashley L Scott
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Louis A Scuderi
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Satoko Takemura
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Iris Talebi
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Alexander Thomson
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Eric T Trautman
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Lowell Umayam
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Claire Walsh
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - John J Walsh
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - C Shan Xu
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Emily A Yakal
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Tansy Yang
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Ting Zhao
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Jan Funke
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Reed George
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Harald F Hess
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Gregory S X E Jefferis
- MRC Laboratory of Molecular Biology, Cambridge, UK
- Department of Zoology, Cambridge University, Cambridge, UK
| | - Christopher Knecht
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Wyatt Korff
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Stephen M Plaza
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Sandro Romani
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Stephan Saalfeld
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Louis K Scheffer
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Stuart Berg
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
| | - Gerald M Rubin
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
| | - Michael B Reiser
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
| |
Collapse
|
4
|
Meissner GW, Vannan A, Jeter J, Close K, DePasquale GM, Dorman Z, Forster K, Beringer JA, Gibney T, Hausenfluck JH, He Y, Henderson K, Johnson L, Johnston RM, Ihrke G, Iyer NA, Lazarus R, Lee K, Li HH, Liaw HP, Melton B, Miller S, Motaher R, Novak A, Ogundeyi O, Petruncio A, Price J, Protopapas S, Tae S, Taylor J, Vorimo R, Yarbrough B, Zeng KX, Zugates CT, Dionne H, Angstadt C, Ashley K, Cavallaro A, Dang T, Gonzalez GA, Hibbard KL, Huang C, Kao JC, Laverty T, Mercer M, Perez B, Pitts SR, Ruiz D, Vallanadu V, Zheng GZ, Goina C, Otsuna H, Rokicki K, Svirskas RR, Cheong HSJ, Dolan MJ, Ehrhardt E, Feng K, Galfi BEI, Goldammer J, Huston SJ, Hu N, Ito M, McKellar C, Minegishi R, Namiki S, Nern A, Schretter CE, Sterne GR, Venkatasubramanian L, Wang K, Wolff T, Wu M, George R, Malkesman O, Aso Y, Card GM, Dickson BJ, Korff W, Ito K, Truman JW, Zlatic M, Rubin GM, FlyLight Project Team. A split-GAL4 driver line resource for Drosophila neuron types. eLife 2025; 13:RP98405. [PMID: 39854223 PMCID: PMC11759409 DOI: 10.7554/elife.98405] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2025] Open
Abstract
Techniques that enable precise manipulations of subsets of neurons in the fly central nervous system (CNS) have greatly facilitated our understanding of the neural basis of behavior. Split-GAL4 driver lines allow specific targeting of cell types in Drosophila melanogaster and other species. We describe here a collection of 3060 lines targeting a range of cell types in the adult Drosophila CNS and 1373 lines characterized in third-instar larvae. These tools enable functional, transcriptomic, and proteomic studies based on precise anatomical targeting. NeuronBridge and other search tools relate light microscopy images of these split-GAL4 lines to connectomes reconstructed from electron microscopy images. The collections are the result of screening over 77,000 split hemidriver combinations. Previously published and new lines are included, all validated for driver expression and curated for optimal cell-type specificity across diverse cell types. In addition to images and fly stocks for these well-characterized lines, we make available 300,000 new 3D images of other split-GAL4 lines.
Collapse
Affiliation(s)
- Geoffrey W Meissner
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Allison Vannan
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Jennifer Jeter
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Kari Close
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Gina M DePasquale
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Zachary Dorman
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Kaitlyn Forster
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Jaye Anne Beringer
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Theresa Gibney
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | | | - Yisheng He
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Kristin Henderson
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Lauren Johnson
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Rebecca M Johnston
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Gudrun Ihrke
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Nirmala A Iyer
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Rachel Lazarus
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Kelley Lee
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Hsing-Hsi Li
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Hua-Peng Liaw
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Brian Melton
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Scott Miller
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Reeham Motaher
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Alexandra Novak
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Omotara Ogundeyi
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Alyson Petruncio
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Jacquelyn Price
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Sophia Protopapas
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Susana Tae
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Jennifer Taylor
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Rebecca Vorimo
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Brianna Yarbrough
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Kevin Xiankun Zeng
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | | | - Heather Dionne
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Claire Angstadt
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Kelly Ashley
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Amanda Cavallaro
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Tam Dang
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | | | - Karen L Hibbard
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Cuizhen Huang
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Jui-Chun Kao
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Todd Laverty
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Monti Mercer
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Brenda Perez
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Scarlett Rose Pitts
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Danielle Ruiz
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Viruthika Vallanadu
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Grace Zhiyu Zheng
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Cristian Goina
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Hideo Otsuna
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Konrad Rokicki
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Robert R Svirskas
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Han SJ Cheong
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Michael-John Dolan
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Erica Ehrhardt
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
- Institute of Zoology, University of CologneCologneGermany
| | - Kai Feng
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
- Queensland Brain Institute, University of QueenslandBrisbaneAustralia
| | - Basel EI Galfi
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Jens Goldammer
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
- Institute of Zoology, University of CologneCologneGermany
| | - Stephen J Huston
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia UniversityNew YorkUnited States
| | - Nan Hu
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Masayoshi Ito
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Claire McKellar
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Ryo Minegishi
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
- Queensland Brain Institute, University of QueenslandBrisbaneAustralia
| | - Shigehiro Namiki
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Aljoscha Nern
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | | | - Gabriella R Sterne
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
- Department of Cell & Molecular Biology, University of California, BerkeleyBerkeleyUnited States
| | | | - Kaiyu Wang
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Tanya Wolff
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Ming Wu
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Reed George
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Oz Malkesman
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Yoshinori Aso
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Gwyneth M Card
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Barry J Dickson
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
- Queensland Brain Institute, University of QueenslandBrisbaneAustralia
| | - Wyatt Korff
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Kei Ito
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
- Institute of Zoology, University of CologneCologneGermany
| | - James W Truman
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Marta Zlatic
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Gerald M Rubin
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | | |
Collapse
|
5
|
Schretter CE, Hindmarsh Sten T, Klapoetke N, Shao M, Nern A, Dreher M, Bushey D, Robie AA, Taylor AL, Branson K, Otopalik A, Ruta V, Rubin GM. Social state alters vision using three circuit mechanisms in Drosophila. Nature 2025; 637:646-653. [PMID: 39567699 PMCID: PMC11735400 DOI: 10.1038/s41586-024-08255-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2024] [Accepted: 10/18/2024] [Indexed: 11/22/2024]
Abstract
Animals are often bombarded with visual information and must prioritize specific visual features based on their current needs. The neuronal circuits that detect and relay visual features have been well studied1-8. Much less is known about how an animal adjusts its visual attention as its goals or environmental conditions change. During social behaviours, flies need to focus on nearby flies9-11. Here we study how the flow of visual information is altered when female Drosophila enter an aggressive state. From the connectome, we identify three state-dependent circuit motifs poised to modify the response of an aggressive female to fly-sized visual objects: convergence of excitatory inputs from neurons conveying select visual features and internal state; dendritic disinhibition of select visual feature detectors; and a switch that toggles between two visual feature detectors. Using cell-type-specific genetic tools, together with behavioural and neurophysiological analyses, we show that each of these circuit motifs is used during female aggression. We reveal that features of this same switch operate in male Drosophila during courtship pursuit, suggesting that disparate social behaviours may share circuit mechanisms. Our study provides a compelling example of using the connectome to infer circuit mechanisms that underlie dynamic processing of sensory signals.
Collapse
Affiliation(s)
| | - Tom Hindmarsh Sten
- Laboratory of Neurophysiology and Behavior, The Rockefeller University, New York, NY, USA
- Department of Biology, Stanford University, Stanford, CA, USA
| | - Nathan Klapoetke
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Mei Shao
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Aljoscha Nern
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Marisa Dreher
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Daniel Bushey
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Alice A Robie
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Adam L Taylor
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Kristin Branson
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Adriane Otopalik
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Vanessa Ruta
- Laboratory of Neurophysiology and Behavior, The Rockefeller University, New York, NY, USA
| | - Gerald M Rubin
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
| |
Collapse
|
6
|
Franke K, Cai C, Ponder K, Fu J, Sokoloski S, Berens P, Tolias AS. Asymmetric distribution of color-opponent response types across mouse visual cortex supports superior color vision in the sky. eLife 2024; 12:RP89996. [PMID: 39234821 PMCID: PMC11377037 DOI: 10.7554/elife.89996] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/06/2024] Open
Abstract
Color is an important visual feature that informs behavior, and the retinal basis for color vision has been studied across various vertebrate species. While many studies have investigated how color information is processed in visual brain areas of primate species, we have limited understanding of how it is organized beyond the retina in other species, including most dichromatic mammals. In this study, we systematically characterized how color is represented in the primary visual cortex (V1) of mice. Using large-scale neuronal recordings and a luminance and color noise stimulus, we found that more than a third of neurons in mouse V1 are color-opponent in their receptive field center, while the receptive field surround predominantly captures luminance contrast. Furthermore, we found that color-opponency is especially pronounced in posterior V1 that encodes the sky, matching the statistics of natural scenes experienced by mice. Using unsupervised clustering, we demonstrate that the asymmetry in color representations across cortex can be explained by an uneven distribution of green-On/UV-Off color-opponent response types that are represented in the upper visual field. Finally, a simple model with natural scene-inspired parametric stimuli shows that green-On/UV-Off color-opponent response types may enhance the detection of 'predatory'-like dark UV-objects in noisy daylight scenes. The results from this study highlight the relevance of color processing in the mouse visual system and contribute to our understanding of how color information is organized in the visual hierarchy across species.
Collapse
Affiliation(s)
- Katrin Franke
- Department of Ophthalmology, Byers Eye Institute, Stanford University School of Medicine, Stanford, United States
- Stanford Bio-X, Stanford University, Stanford, United States
- Wu Tsai Neurosciences Institute, Stanford University, Stanford, United States
- Department of Neuroscience & Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, United States
| | - Chenchen Cai
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
- Graduate Training Center of Neuroscience, International Max Planck Research School, University of Tübingen, Tübingen, Germany
| | - Kayla Ponder
- Department of Neuroscience & Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, United States
| | - Jiakun Fu
- Department of Neuroscience & Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, United States
| | - Sacha Sokoloski
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
- Hertie Institute for AI in Brain Health, University of Tübingen, Tübingen, Germany
| | - Philipp Berens
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
- Hertie Institute for AI in Brain Health, University of Tübingen, Tübingen, Germany
| | - Andreas Savas Tolias
- Department of Ophthalmology, Byers Eye Institute, Stanford University School of Medicine, Stanford, United States
- Stanford Bio-X, Stanford University, Stanford, United States
- Wu Tsai Neurosciences Institute, Stanford University, Stanford, United States
- Department of Neuroscience & Center for Neuroscience and Artificial Intelligence, Baylor College of Medicine, Houston, United States
- Department of Electrical Engineering, Stanford University, Stanford, United States
| |
Collapse
|
7
|
Schretter CE, Sten TH, Klapoetke N, Shao M, Nern A, Dreher M, Bushey D, Robie AA, Taylor AL, Branson KM, Otopalik A, Ruta V, Rubin GM. Social state gates vision using three circuit mechanisms in Drosophila. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.03.15.585289. [PMID: 38559111 PMCID: PMC10979952 DOI: 10.1101/2024.03.15.585289] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Indexed: 04/04/2024]
Abstract
Animals are often bombarded with visual information and must prioritize specific visual features based on their current needs. The neuronal circuits that detect and relay visual features have been well-studied. Yet, much less is known about how an animal adjusts its visual attention as its goals or environmental conditions change. During social behaviors, flies need to focus on nearby flies. Here, we study how the flow of visual information is altered when female Drosophila enter an aggressive state. From the connectome, we identified three state-dependent circuit motifs poised to selectively amplify the response of an aggressive female to fly-sized visual objects: convergence of excitatory inputs from neurons conveying select visual features and internal state; dendritic disinhibition of select visual feature detectors; and a switch that toggles between two visual feature detectors. Using cell-type-specific genetic tools, together with behavioral and neurophysiological analyses, we show that each of these circuit motifs function during female aggression. We reveal that features of this same switch operate in males during courtship pursuit, suggesting that disparate social behaviors may share circuit mechanisms. Our work provides a compelling example of using the connectome to infer circuit mechanisms that underlie dynamic processing of sensory signals.
Collapse
Affiliation(s)
| | - Tom Hindmarsh Sten
- Laboratory of Neurophysiology and Behavior, The Rockefeller University, New York, NY, USA
| | - Nathan Klapoetke
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Mei Shao
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Aljoscha Nern
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Marisa Dreher
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Daniel Bushey
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Alice A Robie
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Adam L Taylor
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Kristin M Branson
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Adriane Otopalik
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Vanessa Ruta
- Laboratory of Neurophysiology and Behavior, The Rockefeller University, New York, NY, USA
| | - Gerald M Rubin
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| |
Collapse
|
8
|
Baden T. Ancestral photoreceptor diversity as the basis of visual behaviour. Nat Ecol Evol 2024; 8:374-386. [PMID: 38253752 DOI: 10.1038/s41559-023-02291-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2023] [Accepted: 11/10/2023] [Indexed: 01/24/2024]
Abstract
Animal colour vision is based on comparing signals from different photoreceptors. It is generally assumed that processing different spectral types of photoreceptor mainly serves colour vision. Here I propose instead that photoreceptors are parallel feature channels that differentially support visual-motor programmes like motion vision behaviours, prey capture and predator evasion. Colour vision may have emerged as a secondary benefit of these circuits, which originally helped aquatic vertebrates to visually navigate and segment their underwater world. Specifically, I suggest that ancestral vertebrate vision was built around three main systems, including a high-resolution general purpose greyscale system based on ancestral red cones and rods to mediate visual body stabilization and navigation, a high-sensitivity specialized foreground system based on ancestral ultraviolet cones to mediate threat detection and prey capture, and a net-suppressive system based on ancestral green and blue cones for regulating red/rod and ultraviolet circuits. This ancestral strategy probably still underpins vision today, and different vertebrate lineages have since adapted their original photoreceptor circuits to suit their diverse visual ecologies.
Collapse
Affiliation(s)
- Tom Baden
- University of Sussex, Sussex Neuroscience, Sussex Center for Sensory Neuroscience and Computation, Brighton, UK.
| |
Collapse
|