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Parcharidou E, Dücker R, Beffa R. Genome-wide study of glutathione transferases and their regulation in flufenacet susceptible and resistant black-grass (Alopecurus myosuroides Huds.). PEST MANAGEMENT SCIENCE 2024; 80:3035-3046. [PMID: 38323683 DOI: 10.1002/ps.8012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2023] [Revised: 01/24/2024] [Accepted: 02/02/2024] [Indexed: 02/08/2024]
Abstract
BACKGROUND Glutathione transferases (GSTs) are enzymes with a wide range of functions, including herbicide detoxification. Up-regulation of GSTs and their detoxification activity enables the grass weed black-grass (Alopecurus myosuroides Huds.) to metabolize the very-long-chain fatty acid synthesis inhibitor flufenacet and other herbicides leading to multiple herbicide resistance. However, the genomic organization and regulation of GSTs genes is still poorly understood. RESULTS In this genome-wide study the location and expression of 115 GSTs were investigated using a recently published black-grass genome. Particularly, the most abundant GSTs of class tau and phi were typically clustered and often followed similar expression patterns but possessed divergent upstream regulatory regions. Similarities were found in the promoters of the most up-regulated GSTs, which are located next to each other in a cluster. The binding motif of the E2F/DP transcription factor complex in the promoter of an up-regulated GST was identical in susceptible and resistant plants, however, adjacent sequences differed. This led to a stronger binding of proteins to the motif of the susceptible plant, indicating repressor activity. CONCLUSIONS This study constitutes the first analysis dealing with the genomic investigation of GST genes found in black-grass and their transcriptional regulation. It highlights the complexity of the evolution of GSTs in black-grass, their duplication and divergence over time. The large number of GSTs allows weeds to detoxify a broad spectrum of herbicides. Ultimately, more research is needed to fully elucidate the regulatory mechanisms of GST expression. © 2024 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.
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Affiliation(s)
- Evlampia Parcharidou
- Division of Plant Pathology and Crop Protection, Georg-August University Göttingen, Göttingen, Germany
| | - Rebecka Dücker
- Division of Plant Pathology and Crop Protection, Georg-August University Göttingen, Göttingen, Germany
| | - Roland Beffa
- Senior Scientist Consultant, Liederbach am Taunus, Germany
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Song L, Yu Y, Chen H, Feng Y, Chen S, Zhang H, Zhou H, Meng L, Wang Y. Response of photosynthetic characteristics and antioxidant system in the leaves of safflower to NaCl and NaHCO 3. PLANT CELL REPORTS 2024; 43:146. [PMID: 38764051 DOI: 10.1007/s00299-024-03234-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2024] [Accepted: 05/06/2024] [Indexed: 05/21/2024]
Abstract
KEY MESSAGE Compared with NaCl, NaHCO3 caused more serious oxidative damage and photosynthesis inhibition in safflower by down-regulating the expression of related genes. Salt-alkali stress is one of the important factors that limit plant growth. NaCl and sodium bicarbonate (NaHCO3) are neutral and alkaline salts, respectively. This study investigated the physiological characteristics and molecular responses of safflower (Carthamus tinctorius L.) leaves treated with 200 mmol L-1 of NaCl or NaHCO3. The plants treated with NaCl treatment were less effective at inhibiting the growth of safflower, but increased the content of malondialdehyde (MDA) in leaves. Meanwhile, safflower alleviated stress damage by increasing proline (Pro), soluble protein (SP), and soluble sugar (SS). Both fresh weight and dry weight of safflower was severely decreased when it was subjected to NaHCO3 stress, and there was a significant increase in the permeability of cell membranes and the contents of osmotic regulatory substances. An enrichment analysis of the differentially expressed genes (DEGs) using Gene Ontology and the Kyoto Encyclopedia of Genes and Genomes identified significant enrichment of photosynthesis and pathways related to oxidative stress. Furthermore, a weighted gene co-expression network analysis (WGCNA) showed that the darkgreen module had the highest correlation with photosynthesis and oxidative stress traits. Large numbers of transcription factors, primarily from the MYB, GRAS, WRKY, and C2H2 families, were predicted from the genes within the darkgreen module. An analysis of physiological indicators and DEGs, it was found that under saline-alkali stress, genes related to chlorophyll synthesis enzymes were downregulated, while those related to degradation were upregulated, resulting in inhibited chlorophyll biosynthesis and decreased chlorophyll content. Additionally, NaCl and NaHCO3 stress downregulated the expression of genes related to the Calvin cycle, photosynthetic antenna proteins, and the activity of photosynthetic reaction centers to varying degrees, hindering the photosynthetic electron transfer process, suppressing photosynthesis, with NaHCO3 stress causing more pronounced adverse effects. In terms of oxidative stress, the level of reactive oxygen species (ROS) did not change significantly under the NaCl treatment, but the contents of hydrogen peroxide and the rate of production of superoxide anions increased significantly under NaHCO3 stress. In addition, treatment with NaCl upregulated the levels of expression of the key genes for superoxide dismutase (SOD), catalase (CAT), peroxidase (POD), the ascorbate-glutathione cycle, and the thioredoxin-peroxiredoxin pathway, and increased the activity of these enzymes, thus, reducing oxidative damage. Similarly, NaHCO3 stress increased the activities of SOD, CAT, and POD and the content of ascorbic acid and initiated the glutathione-S-transferase pathway to remove excess ROS but suppressed the regeneration of glutathione and the activity of peroxiredoxin. Overall, both neutral and alkaline salts inhibited the photosynthetic process of safflower, although alkaline salt caused a higher level of stress than neutral salt. Safflower alleviated the oxidative damage induced by stress by regulating its antioxidant system.
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Affiliation(s)
- Linlin Song
- School of Life Sciences, Henan Institute of Science and Technology, Henan, China
| | - Yongliang Yu
- Institute of Chinese Herbel Medicines, Henan Academy of Agricultural Sciences, Zhengzhou, China
| | - Hongzhi Chen
- College of Bioengineering, Xinxiang Institute of Engineering, Henan, China
| | - Yuwei Feng
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, Heilongjiang, China
| | - Shuo Chen
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, Heilongjiang, China
| | - Huihui Zhang
- College of Life Sciences, Northeast Forestry University, Harbin, Heilongjiang, China
| | - Haijia Zhou
- School of Life Sciences, Henan Institute of Science and Technology, Henan, China
| | - Li Meng
- School of Life Sciences, Henan Institute of Science and Technology, Henan, China.
| | - Yue Wang
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, Heilongjiang, China.
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Tossounian MA, Zhao Y, Yu BYK, Markey SA, Malanchuk O, Zhu Y, Cain A, Gout I. Low-molecular-weight thiol transferases in redox regulation and antioxidant defence. Redox Biol 2024; 71:103094. [PMID: 38479221 PMCID: PMC10950700 DOI: 10.1016/j.redox.2024.103094] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2023] [Revised: 02/08/2024] [Accepted: 02/18/2024] [Indexed: 03/24/2024] Open
Abstract
Low-molecular-weight (LMW) thiols are produced in all living cells in different forms and concentrations. Glutathione (GSH), coenzyme A (CoA), bacillithiol (BSH), mycothiol (MSH), ergothioneine (ET) and trypanothione T(SH)2 are the main LMW thiols in eukaryotes and prokaryotes. LMW thiols serve as electron donors for thiol-dependent enzymes in redox-mediated metabolic and signaling processes, protect cellular macromolecules from oxidative and xenobiotic stress, and participate in the reduction of oxidative modifications. The level and function of LMW thiols, their oxidized disulfides and mixed disulfide conjugates in cells and tissues is tightly controlled by dedicated oxidoreductases, such as peroxiredoxins, glutaredoxins, disulfide reductases and LMW thiol transferases. This review provides the first summary of the current knowledge of structural and functional diversity of transferases for LMW thiols, including GSH, BSH, MSH and T(SH)2. Their role in maintaining redox homeostasis in single-cell and multicellular organisms is discussed, focusing in particular on the conjugation of specific thiols to exogenous and endogenous electrophiles, or oxidized protein substrates. Advances in the development of new research tools, analytical methodologies, and genetic models for the analysis of known LMW thiol transferases will expand our knowledge and understanding of their function in cell growth and survival under oxidative stress, nutrient deprivation, and during the detoxification of xenobiotics and harmful metabolites. The antioxidant function of CoA has been recently discovered and the breakthrough in defining the identity and functional characteristics of CoA S-transferase(s) is soon expected.
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Affiliation(s)
- Maria-Armineh Tossounian
- Department of Structural and Molecular Biology, University College London, London, WC1E 6BT, United Kingdom
| | - Yuhan Zhao
- Department of Structural and Molecular Biology, University College London, London, WC1E 6BT, United Kingdom
| | - Bess Yi Kun Yu
- Department of Structural and Molecular Biology, University College London, London, WC1E 6BT, United Kingdom
| | - Samuel A Markey
- Department of Structural and Molecular Biology, University College London, London, WC1E 6BT, United Kingdom
| | - Oksana Malanchuk
- Department of Structural and Molecular Biology, University College London, London, WC1E 6BT, United Kingdom; Department of Cell Signaling, Institute of Molecular Biology and Genetics, Kyiv, 143, Ukraine
| | - Yuejia Zhu
- Department of Structural and Molecular Biology, University College London, London, WC1E 6BT, United Kingdom
| | - Amanda Cain
- Department of Structural and Molecular Biology, University College London, London, WC1E 6BT, United Kingdom
| | - Ivan Gout
- Department of Structural and Molecular Biology, University College London, London, WC1E 6BT, United Kingdom; Department of Cell Signaling, Institute of Molecular Biology and Genetics, Kyiv, 143, Ukraine.
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Fu W, MacGregor DR, Comont D, Saski CA. Sequence Characterization of Extra-Chromosomal Circular DNA Content in Multiple Blackgrass ( Alopecurus myosuroides) Populations. Genes (Basel) 2023; 14:1905. [PMID: 37895254 PMCID: PMC10606437 DOI: 10.3390/genes14101905] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2023] [Revised: 09/27/2023] [Accepted: 09/28/2023] [Indexed: 10/29/2023] Open
Abstract
Alopecurus myosuroides (blackgrass) is a problematic weed of Western European winter wheat, and its success is largely due to widespread multiple-herbicide resistance. Previous analysis of F2 seed families derived from two distinct blackgrass populations exhibiting equivalent non-target site resistance (NTSR) phenotypes shows resistance is polygenic and evolves from standing genetic variation. Using a CIDER-seq pipeline, we show that herbicide-resistant (HR) and herbicide-sensitive (HS) F3 plants from these F2 seed families as well as the parent populations they were derived from carry extra-chromosomal circular DNA (eccDNA). We identify the similarities and differences in the coding structures within and between resistant and sensitive populations. Although the numbers and size of detected eccDNAs varied between the populations, comparisons between the HR and HS blackgrass populations identified shared and unique coding content, predicted genes, and functional protein domains. These include genes related to herbicide detoxification such as Cytochrome P450s, ATP-binding cassette transporters, and glutathione transferases including AmGSTF1. eccDNA content was mapped to the A. myosuroides reference genome, revealing genomic regions at the distal end of chromosome 5 and the near center of chromosomes 1 and 7 as regions with a high number of mapped eccDNA gene density. Mapping to 15 known herbicide-resistant QTL regions showed that the eccDNA coding sequences matched twelve, with four QTL matching HS coding sequences; only one region contained HR coding sequences. These findings establish that, like other pernicious weeds, blackgrass has eccDNAs that contain homologs of chromosomal genes, and these may contribute genetic heterogeneity and evolutionary innovation to rapidly adapt to abiotic stresses, including herbicide treatment.
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Affiliation(s)
- Wangfang Fu
- Department of Plant and Environmental Sciences, Clemson University, Clemson, SC 29634, USA;
| | - Dana R. MacGregor
- Rothamsted Research, Protecting Crops and the Environment, Harpenden, Hertfordshire AL5 2JQ, UK; (D.R.M.); (D.C.)
| | - David Comont
- Rothamsted Research, Protecting Crops and the Environment, Harpenden, Hertfordshire AL5 2JQ, UK; (D.R.M.); (D.C.)
| | - Christopher A. Saski
- Department of Plant and Environmental Sciences, Clemson University, Clemson, SC 29634, USA;
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Liu X, Hou Z, Zhang Y, Merchant A, Zhong ME, Ma G, Zeng Q, Wu L, Zhou X, Luo K, Ding C. Cloning and functional characterization of a tau class glutathione transferase associated with haloxyfop-P-methyl resistance in Digitaria sanguinalis. PEST MANAGEMENT SCIENCE 2023; 79:3950-3958. [PMID: 37248658 DOI: 10.1002/ps.7588] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2023] [Revised: 05/22/2023] [Accepted: 05/29/2023] [Indexed: 05/31/2023]
Abstract
BACKGROUND Haloxyfop-P-methyl, an acetyl-CoA carboxylase (ACCase)-inhibiting herbicide, has been extensively used to control grass weeds. Widespread use of haloxyfop-P-methyl in cotton fields in China has led to the development of glutathione transferase (GST)-mediated resistance in Digitaria sanguinalis. An RNA-seq analysis identified DsGSTU1, a tau class glutathione transferase from the D. sanguinalis transcriptome as a potential candidate. Here, we cloned DsGSTU1 from D. sanguinalis young leaf tissues and subsequently characterized DsGSTU1 by a combination of sequence analysis, as well as functional heterologous expression in rice. RESULTS The full-length coding DNA sequence (CDS) of DsGSTU1 is 717 bp in length. Higher DsGSTU1 expression was observed in haloxyfop-P-methyl-resistant (HR) D. sanguinalis than in haloxyfop-P-methyl-susceptible (HS) plants. Overexpression of the DsGSTU1 gene was confirmed by transformation into the wild-type (WT) Nipponbare rice with pBWA(V)HS, a recombinant expression vector. GST activity in transgenic rice seedlings was 1.18-1.40-fold higher than the WT rice seedlings before and after haloxyfop-P-methyl treatment, respectively. Additionally, transgenic rice seedlings overexpressing DsGSTU1 were less sensitive to haloxyfop-P-methyl. CONCLUSION Our combined findings suggest that DsGSTU1 is involved in metabolic resistance to haloxyfop-P-methyl in D. sanguinalis. A better understanding of the major genes contributing to herbicide-resistant D. sanguinalis facilitates the development of resistance management strategies for this global invasive grass weed. © 2023 Society of Chemical Industry.
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Affiliation(s)
- Xiangying Liu
- College of Plant Protection, Hunan Agricultural University, Changsha, China
- Hunan Provincial Key Laboratory for Biology and Control of Weeds, Hunan Academy of Agricultural Sciences, Changsha, China
| | - Zhenlin Hou
- College of Plant Protection, Hunan Agricultural University, Changsha, China
| | - Yuying Zhang
- College of Plant Protection, Hunan Agricultural University, Changsha, China
| | - Austin Merchant
- Department of Entomology, University of Kentucky, Lexington, KY, USA
| | - Mei-E Zhong
- School of Chemistry and Materials Science, Hunan Agricultural University, Changsha, China
| | - Guolan Ma
- Hunan Provincial Key Laboratory for Biology and Control of Weeds, Hunan Academy of Agricultural Sciences, Changsha, China
| | - Qing Zeng
- Hunan Provincial Key Laboratory for Biology and Control of Weeds, Hunan Academy of Agricultural Sciences, Changsha, China
| | - Lamei Wu
- Hunan Provincial Key Laboratory for Biology and Control of Weeds, Hunan Academy of Agricultural Sciences, Changsha, China
| | - Xuguo Zhou
- Department of Entomology, University of Kentucky, Lexington, KY, USA
| | - Kun Luo
- College of Plant Protection, Hunan Agricultural University, Changsha, China
| | - Chunxia Ding
- College of Plant Protection, Hunan Agricultural University, Changsha, China
- School of Chemistry and Materials Science, Hunan Agricultural University, Changsha, China
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Parcharidou E, Dücker R, Zöllner P, Ries S, Orru R, Beffa R. Recombinant glutathione transferases from flufenacet-resistant black-grass (Alopecurus myosuroides Huds.) form different flufenacet metabolites and differ in their interaction with pre- and post-emergence herbicides. PEST MANAGEMENT SCIENCE 2023; 79:3376-3386. [PMID: 37132078 DOI: 10.1002/ps.7523] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2023] [Revised: 04/28/2023] [Accepted: 05/03/2023] [Indexed: 05/04/2023]
Abstract
BACKGROUND Black-grass (Alopecurus myosuroides Huds.) has become a problematic weed in cereals in Europe. Besides resistance to post-emergent herbicides becoming increasingly widespread, enhanced metabolism of inhibitors of the synthesis of very-long-chain fatty acids (VLCFAs), such as flufenacet, is evolving. Yet, cross-resistance patterns and evolution of this resistance remains poorly understood. RESULTS The cDNA sequences of five glutathione transferases (GSTs) upregulated in flufenacet resistant black-grass were identified and used for recombinant protein expression. Moderate to slow detoxification of flufenacet was verified for all candidate GSTs expressed in E. coli, and the most active protein produced flufenacet-alcohol instead of a glutathione conjugate, in the presence of reduced glutathione (GSH). Moreover, cross-resistance to other VLCFA-inhibitors e.g., acetochlor and pyroxasulfone and the ACCase inhibitor fenoxaprop was verified in vitro. Various other herbicides of different modes of action including VLCFA-inhibitors were not detoxified by the candidate GSTs. CONCLUSIONS As several in planta upregulated GSTs detoxified flufenacet in vitro, the shift in sensitivity observed in black-grass populations, is likely a result of an additive effect. The polygenic character and the relatively low turnover rate of the individual GSTs may explain the slow evolution of flufenacet resistance. In addition, flufenacet resistance was accompanied by cross-resistance with some, but not all, herbicides of the same mode of action, and furthermore to the ACCase inhibitor fenoxaprop-ethyl. Hence, not only the rotation of herbicide modes of action, but also of individual active ingredients is important for resistance management. © 2023 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.
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Affiliation(s)
- Evlampia Parcharidou
- Division of Plant Pathology and Crop Protection, Georg-August University Göttingen, Göttingen, Germany
| | - Rebecka Dücker
- Division of Plant Pathology and Crop Protection, Georg-August University Göttingen, Göttingen, Germany
| | - Peter Zöllner
- Bayer AG, CropScience Division, Industrial Park Höchst, Frankfurt am Main, Germany
| | - Susanne Ries
- Bayer AG, CropScience Division, Industrial Park Höchst, Frankfurt am Main, Germany
| | - Roberto Orru
- Bayer AG, CropScience Division, Industrial Park Höchst, Frankfurt am Main, Germany
| | - Roland Beffa
- Senior Scientist Consultant, Liederbach am Taunus, Germany
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Chen K, Yang H, Peng Y, Liu D, Zhang J, Zhao Z, Wu L, Lin T, Bai L, Wang L. Genomic analyses provide insights into the polyploidization-driven herbicide adaptation in Leptochloa weeds. PLANT BIOTECHNOLOGY JOURNAL 2023. [PMID: 37154437 PMCID: PMC10363762 DOI: 10.1111/pbi.14065] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2022] [Revised: 02/21/2023] [Accepted: 04/14/2023] [Indexed: 05/10/2023]
Abstract
Polyploidy confers a selective advantage under stress conditions; however, whether polyploidization mediates enhanced herbicide adaptation remains largely unknown. Tetraploid Leptochloa chinensis is a notorious weed in the rice ecosystem, causing severe yield loss in rice. In China, L. chinensis has only one sister species, the diploid L. panicea, whose damage is rarely reported. To gain insights into the effects of polyploidization on herbicide adaptation, we first assembled a high-quality genome of L. panicea and identified genome structure variations with L. chinensis. Moreover, we identified herbicide-resistance genes specifically expanded in L. chinensis, which may confer a greater herbicide adaptability in L. chinensis. Analysis of gene retention and loss showed that five herbicide target-site genes and several herbicide nontarget-site resistance gene families were retained during polyploidization. Notably, we identified three pairs of polyploidization-retained genes including LcABCC8, LcCYP76C1 and LcCYP76C4 that may enhance herbicide resistance. More importantly, we found that both copies of LcCYP76C4 were under herbicide selection during the spread of L. chinensis in China. Furthermore, we identified another gene potentially involved in herbicide resistance, LcCYP709B2, which is also retained during polyploidization and under selection. This study provides insights into the genomic basis of the enhanced herbicide adaptability of Leptochloa weeds during polyploidization and provides guidance for the precise and efficient control of polyploidy weeds.
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Affiliation(s)
- Ke Chen
- State Key Laboratory of Hybrid Rice, Hunan Academy of Agricultural Sciences, Changsha, China
- Key Laboratory of Indica Rice Genetics and Breeding in the Middle and Lower Reaches of Yangtze River Valley, Ministry of Agriculture and Rural Affairs, Hunan Rice Research Institute, Hunan Academy of Agricultural Sciences, Changsha, China
- Huangpu Research Institute of Longping Agricultural Science and Technology, Guangzhou, China
- Longping Branch, College of Biology, Hunan University, Changsha, China
- Hunan Weed Science Key Laboratory, Hunan Agricultural Biotechnology Research Institute, Hunan Academy of Agricultural Sciences, Changsha, China
| | - Haona Yang
- State Key Laboratory of Hybrid Rice, Hunan Academy of Agricultural Sciences, Changsha, China
- Huangpu Research Institute of Longping Agricultural Science and Technology, Guangzhou, China
- Hunan Weed Science Key Laboratory, Hunan Agricultural Biotechnology Research Institute, Hunan Academy of Agricultural Sciences, Changsha, China
| | - Yajun Peng
- State Key Laboratory of Hybrid Rice, Hunan Academy of Agricultural Sciences, Changsha, China
- Hunan Weed Science Key Laboratory, Hunan Agricultural Biotechnology Research Institute, Hunan Academy of Agricultural Sciences, Changsha, China
| | - Ducai Liu
- Hunan Weed Science Key Laboratory, Hunan Agricultural Biotechnology Research Institute, Hunan Academy of Agricultural Sciences, Changsha, China
| | | | - Zhenghong Zhao
- State Key Laboratory of Hybrid Rice, Hunan Academy of Agricultural Sciences, Changsha, China
- Key Laboratory of Indica Rice Genetics and Breeding in the Middle and Lower Reaches of Yangtze River Valley, Ministry of Agriculture and Rural Affairs, Hunan Rice Research Institute, Hunan Academy of Agricultural Sciences, Changsha, China
- Huangpu Research Institute of Longping Agricultural Science and Technology, Guangzhou, China
- Longping Branch, College of Biology, Hunan University, Changsha, China
| | - Lamei Wu
- Hunan Weed Science Key Laboratory, Hunan Agricultural Biotechnology Research Institute, Hunan Academy of Agricultural Sciences, Changsha, China
| | - Tao Lin
- State Key Laboratory of Agrobiotechnology, Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, College of Horticulture, China Agricultural University, Beijing, China
| | - Lianyang Bai
- State Key Laboratory of Hybrid Rice, Hunan Academy of Agricultural Sciences, Changsha, China
- Key Laboratory of Indica Rice Genetics and Breeding in the Middle and Lower Reaches of Yangtze River Valley, Ministry of Agriculture and Rural Affairs, Hunan Rice Research Institute, Hunan Academy of Agricultural Sciences, Changsha, China
- Huangpu Research Institute of Longping Agricultural Science and Technology, Guangzhou, China
- Longping Branch, College of Biology, Hunan University, Changsha, China
- Hunan Weed Science Key Laboratory, Hunan Agricultural Biotechnology Research Institute, Hunan Academy of Agricultural Sciences, Changsha, China
| | - Lifeng Wang
- State Key Laboratory of Hybrid Rice, Hunan Academy of Agricultural Sciences, Changsha, China
- Key Laboratory of Indica Rice Genetics and Breeding in the Middle and Lower Reaches of Yangtze River Valley, Ministry of Agriculture and Rural Affairs, Hunan Rice Research Institute, Hunan Academy of Agricultural Sciences, Changsha, China
- Huangpu Research Institute of Longping Agricultural Science and Technology, Guangzhou, China
- Longping Branch, College of Biology, Hunan University, Changsha, China
- Hunan Weed Science Key Laboratory, Hunan Agricultural Biotechnology Research Institute, Hunan Academy of Agricultural Sciences, Changsha, China
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Wiszniewska A, Makowski W. Assessment of Shoot Priming Efficiency to Counteract Complex Metal Stress in Halotolerant Lobularia maritima. PLANTS (BASEL, SWITZERLAND) 2023; 12:1440. [PMID: 37050070 PMCID: PMC10096694 DOI: 10.3390/plants12071440] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/27/2023] [Revised: 03/18/2023] [Accepted: 03/23/2023] [Indexed: 06/19/2023]
Abstract
The study investigated whether short-term priming supports plant defense against complex metal stress and multiple stress (metals and salinity) in halophyte Lobularia maritima (L.) Desv. Plants were pre-treated with ectoine (Ect), nitric oxide donor-sodium nitroprusside (SNP), or hydrogen sulfide donor-GYY4137 for 7 days, and were transferred onto medium containing a mixture of metal ions: Zn, Pb, and Cd. To test the effect of priming agents in multiple stress conditions, shoots were also subjected to low salinity (20 mM NaCl), applied alone, or combined with metals. Hydropriming was a control priming treatment. Stress impact was evaluated on a basis of growth parameters, whereas defense responses were on a basis of the detoxification activity of glutathione S-transferase (GST), radical scavenging activity, and accumulation of thiols and phenolic compounds. Exposure to metals reduced shoot biomass and height but had no impact on the formation of new shoots. Priming with nitric oxide annihilated the toxic effects of metals. It was related to a sharp increase in GST activity, glutathione accumulation, and boosted radical scavenging activity. In NO-treated shoots level of total phenolic compounds (TPC) and flavonoids remained unaffected, in contrast to other metal-treated shoots. Under combined metal stress and salinity, NO and H2S were capable of restoring or improving growth parameters, as they stimulated radical scavenging activity. Ect and H2S did not exert any effect on metal-treated shoots in comparison to hydropriming. The results revealed the stimulatory role of nitric oxide and low doses of NaCl in combating the toxic effects of complex metal stress in L. maritima. Both NO and NaCl interfered with thiol metabolism and antioxidant activity, whereas NaCl also contributed to the accumulation of phenolic compounds.
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Casey A, Dolan L. Genes encoding cytochrome P450 monooxygenases and glutathione S-transferases associated with herbicide resistance evolved before the origin of land plants. PLoS One 2023; 18:e0273594. [PMID: 36800395 PMCID: PMC9937507 DOI: 10.1371/journal.pone.0273594] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2022] [Accepted: 02/06/2023] [Indexed: 02/18/2023] Open
Abstract
Cytochrome P450 (CYP) monooxygenases and glutathione S-transferases (GST) are enzymes that catalyse chemical modifications of a range of organic compounds. Herbicide resistance has been associated with higher levels of CYP and GST gene expression in some herbicide-resistant weed populations compared to sensitive populations of the same species. By comparing the protein sequences of 9 representative species of the Archaeplastida-the lineage which includes red algae, glaucophyte algae, chlorophyte algae, and streptophytes-and generating phylogenetic trees, we identified the CYP and GST proteins that existed in the common ancestor of the Archaeplastida. All CYP clans and all but one land plant GST classes present in land plants evolved before the divergence of streptophyte algae and land plants from their last common ancestor. We also demonstrate that there are more genes encoding CYP and GST proteins in land plants than in algae. The larger numbers of genes among land plants largely results from gene duplications in CYP clans 71, 72, and 85 and in the GST phi and tau classes [1,2]. Enzymes that either metabolise herbicides or confer herbicide resistance belong to CYP clans 71 and 72 and the GST phi and tau classes. Most CYP proteins that have been shown to confer herbicide resistance are members of the CYP81 family from clan 71. These results demonstrate that the clan and class diversity in extant plant CYP and GST proteins had evolved before the divergence of land plants and streptophyte algae from a last common ancestor estimated to be between 515 and 474 million years ago. Then, early in embryophyte evolution during the Palaeozoic, gene duplication in four of the twelve CYP clans, and in two of the fourteen GST classes, led to the large numbers of CYP and GST proteins found in extant land plants. It is among the genes of CYP clans 71 and 72 and GST classes phi and tau that alleles conferring herbicide resistance evolved in the last fifty years.
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Affiliation(s)
- Alexandra Casey
- Gregor Mendel Institute, Vienna, Austria
- Department of Plant Sciences, University of Oxford, Oxford, Oxfordshire, United Kingdom
| | - Liam Dolan
- Gregor Mendel Institute, Vienna, Austria
- Department of Plant Sciences, University of Oxford, Oxford, Oxfordshire, United Kingdom
- * E-mail:
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Casey C, Köcher T, Champion C, Jandrasits K, Mosiolek M, Bonnot C, Dolan L. Reduced coenzyme Q synthesis confers non-target site resistance to the herbicide thaxtomin A. PLoS Genet 2023; 19:e1010423. [PMID: 36608112 PMCID: PMC9851558 DOI: 10.1371/journal.pgen.1010423] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2022] [Revised: 01/19/2023] [Accepted: 12/21/2022] [Indexed: 01/09/2023] Open
Abstract
Herbicide resistance in weeds is a growing threat to global crop production. Non-target site resistance is problematic because a single resistance allele can confer tolerance to many herbicides (cross resistance), and it is often a polygenic trait so it can be difficult to identify the molecular mechanisms involved. Most characterized molecular mechanisms of non-target site resistance are caused by gain-of-function mutations in genes from a few key gene families-the mechanisms of resistance caused by loss-of-function mutations remain unclear. In this study, we first show that the mechanism of non-target site resistance to the herbicide thaxtomin A conferred by loss-of-function of the gene PAM16 is conserved in Marchantia polymorpha, validating its use as a model species with which to study non-target site resistance. To identify mechanisms of non-target site resistance caused by loss-of-function mutations, we generated 107 UV-B mutagenized M. polymorpha spores and screened for resistance to the herbicide thaxtomin A. We isolated 13 thaxtomin A-resistant mutants and found that 3 mutants carried candidate resistance-conferring SNPs in the MpRTN4IP1L gene. Mprtn4ip1l mutants are defective in coenzyme Q biosynthesis and accumulate higher levels of reactive oxygen species (ROS) than wild-type plants. Mutants are weakly resistant to thaxtomin A and cross resistant to isoxaben, suggesting that loss of MpRTN4IP1L function confers non-target site resistance. Mutants are also defective in thaxtomin A metabolism. We conclude that loss of MpRTN4IP1L function is a novel mechanism of non-target site herbicide resistance and propose that other mutations that increase ROS levels or decrease thaxtomin A metabolism could contribute to thaxtomin A resistance in the field.
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Affiliation(s)
- Chloe Casey
- Department of Biology, University of Oxford, Oxford, United Kingdom
- Gregor Mendel Institute, Vienna, Austria
| | | | - Clément Champion
- Department of Biology, University of Oxford, Oxford, United Kingdom
| | | | | | - Clémence Bonnot
- Department of Biology, University of Oxford, Oxford, United Kingdom
| | - Liam Dolan
- Department of Biology, University of Oxford, Oxford, United Kingdom
- Gregor Mendel Institute, Vienna, Austria
- * E-mail:
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11
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Zhang Y, Gao H, Fang J, Wang H, Chen J, Li J, Dong L. Up-regulation of bZIP88 transcription factor is involved in resistance to three different herbicides in both Echinochloa crus-galli and E. glabrescens. JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:6916-6930. [PMID: 35867472 DOI: 10.1093/jxb/erac319] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Accepted: 07/21/2022] [Indexed: 06/15/2023]
Abstract
The resistance of weeds to herbicides poses a major threat to agricultural production, and non-target-site resistance (NTSR) is often a serious problem as its mechanisms can in some cases confer resistance to herbicides with different modes of action. In this study, we hypothesized that bZIP transcription factors (TFs), which regulate abiotic stress responses in many plants, play a regulatory role in NTSR. Whole-plant assays indicated that the wild grasses Echinochloa crus-galli and E. glabrescens are resistant to the herbicides penoxsulam, cyhalofop-butyl, and quintrione. Transcriptome sequencing then identified 101 and 49 bZIP TFs with differential expression following penoxsulam treatment in E. crus-galli and E. glabrescens, respectively. Twelve of these genes had >60% homology with rice genes. The expression of bZIP88 was considerably up-regulated 6 h after treatment with the three different herbicides, and it was similar between resistant and susceptible populations; however, the relative expression levels before herbicide treatment and 24 h after were the same. We used rice (Oryza sativa ssp. japonica cv Nipponbare) as a model system for functional validation and found that CRISPR-Cas9-knockout of the rice bZIP88 ortholog increased the sensitivity to herbicide, whereas overexpression reduced it. The OsbZIP88 protein was localized to the nucleus. Using ChIP coupled with high-throughput sequencing, OsbZIP88 was found to form a network regulatory center with other TFs such as bZIP20/52/59 to regulate OsKS1, OsCOE1, and OsIM1, which are related to auxin, abscisic acid, brassinosteroids, and gibberellic acid. Based on these results, we have established a database of bZIP TFs corresponding to herbicide stress, and resolved the mechanisms of the positive regulation of herbicide resistance by bZIP88, thereby providing new insights for NTSR.
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Affiliation(s)
- Yuhua Zhang
- College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China
- Key Laboratory of Integrated Management of Crop Diseases and Pests (Nanjing Agricultural University), Ministry of Education, China
| | - Haitao Gao
- College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China
- Key Laboratory of Integrated Management of Crop Diseases and Pests (Nanjing Agricultural University), Ministry of Education, China
| | - Jiapeng Fang
- College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China
- Key Laboratory of Integrated Management of Crop Diseases and Pests (Nanjing Agricultural University), Ministry of Education, China
| | - Hao Wang
- College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China
- Key Laboratory of Integrated Management of Crop Diseases and Pests (Nanjing Agricultural University), Ministry of Education, China
| | - Jinyi Chen
- College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China
- Key Laboratory of Integrated Management of Crop Diseases and Pests (Nanjing Agricultural University), Ministry of Education, China
| | - Jun Li
- College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China
- Key Laboratory of Integrated Management of Crop Diseases and Pests (Nanjing Agricultural University), Ministry of Education, China
| | - Liyao Dong
- College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China
- Key Laboratory of Integrated Management of Crop Diseases and Pests (Nanjing Agricultural University), Ministry of Education, China
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12
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Akter F, Munemasa S, Nakamura T, Nakamura Y, Murata Y. Negative regulation of salicylic acid-induced stomatal closure by glutathione in Arabidopsis thaliana. Biosci Biotechnol Biochem 2022; 86:1378-1382. [PMID: 35867881 DOI: 10.1093/bbb/zbac116] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2022] [Accepted: 07/06/2022] [Indexed: 11/14/2022]
Abstract
Salicylic acid (SA) is a ubiquitous phenolic phytohormone that induces stomatal closure. Glutathione (GSH) negatively regulates stomatal closure induced by other plant hormones such as abscisic acid (ABA) and methyl jasmonate (MeJA). However, the involvement of GSH in SA-induced stomatal closure is still unknown. We investigated the regulation of SA signaling by GSH in guard cells using an Arabidopsis thaliana mutant, cad2-1, which is deficient in the first GSH biosynthesis enzyme, γ-glutamylcysteine synthetase. Application of SA decreased stomatal apertures with decreasing intracellular GSH level in guard cells. Decreasing GSH by the cad2-1 mutation and by a GSH-decreasing chemical, 1-chloro-2,4-dinitrobenzene, enhanced the SA-induced stomatal closure. A treatment with glutathione monoethyl ester restored the GSH level in the cad2-1 guard cells and complemented the stomatal phenotype of the mutant. These results indicate that GSH negatively modulates SA-induced stomatal closure in A. thaliana.
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Affiliation(s)
- Fahmida Akter
- Graduate School of Environmental and Life Science, Okayama University, Okayama, Japan
| | - Shintaro Munemasa
- Graduate School of Environmental and Life Science, Okayama University, Okayama, Japan
| | - Toshiyuki Nakamura
- Graduate School of Environmental and Life Science, Okayama University, Okayama, Japan
| | - Yoshimasa Nakamura
- Graduate School of Environmental and Life Science, Okayama University, Okayama, Japan
| | - Yoshiyuki Murata
- Graduate School of Environmental and Life Science, Okayama University, Okayama, Japan
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13
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Ioannou E, Papageorgiou AC, Labrou NE. Directed Evolution of Phi Class Glutathione Transferases Involved in Multiple-Herbicide Resistance of Grass Weeds and Crops. Int J Mol Sci 2022; 23:ijms23137469. [PMID: 35806486 PMCID: PMC9267659 DOI: 10.3390/ijms23137469] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2022] [Revised: 06/30/2022] [Accepted: 07/01/2022] [Indexed: 11/16/2022] Open
Abstract
The extensive application of herbicides in crop cultivation has indisputably led to the emergence of weed populations characterized by multiple herbicide resistance (MHR). This phenomenon is associated with the enhanced metabolism and detoxifying ability of endogenous enzymes, such as phi class glutathione transferases (GSTFs). In the present work, a library of mutant GSTFs was created by in vitro directed evolution via DNA shuffling. Selected gstf genes from the weeds Alopecurus myosuroides and Lolium rigidum, and the cereal crops Triticum durum and Hordeum vulgare were recombined to forge a library of novel chimeric GSTFs. The library was activity screened and the best-performing enzyme variants were purified and characterized. The work allowed the identification of enzyme variants that exhibit an eight-fold improvement in their catalytic efficiency, higher thermal stability (8.3 °C) and three-times higher inhibition sensitivity towards the herbicide butachlor. The crystal structures of the best-performing enzyme variants were determined by X-ray crystallography. Structural analysis allowed the identification of specific structural elements that are responsible for kcat regulation, thermal stability and inhibition potency. These improved novel enzymes hold the potential for utilization in biocatalysis and green biotechnology applications. The results of the present work contribute significantly to our knowledge of the structure and function of phi class plant GSTs and shed light on their involvement in the mechanisms of MHR.
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Affiliation(s)
- Elisavet Ioannou
- Laboratory of Enzyme Technology, Department of Biotechnology, School of Applied Biology and Biotechnology, Agricultural University of Athens, 75 Iera Odos Street, 11855 Athens, Greece;
| | | | - Nikolaos E. Labrou
- Laboratory of Enzyme Technology, Department of Biotechnology, School of Applied Biology and Biotechnology, Agricultural University of Athens, 75 Iera Odos Street, 11855 Athens, Greece;
- Correspondence:
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14
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Faragó D, Zsigmond L, Benyó D, Alcazar R, Rigó G, Ayaydin F, Rabilu SA, Hunyadi‐Gulyás É, Szabados L. Small paraquat resistance proteins modulate paraquat and ABA responses and confer drought tolerance to overexpressing Arabidopsis plants. PLANT, CELL & ENVIRONMENT 2022; 45:1985-2003. [PMID: 35486392 PMCID: PMC9324991 DOI: 10.1111/pce.14338] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2019] [Revised: 03/31/2022] [Accepted: 04/03/2022] [Indexed: 05/13/2023]
Abstract
Adaptation of higher plants to extreme environmental conditions is under complex regulation. Several small peptides have recently been described to modulate responses to stress conditions. The Small Paraquat resistance protein (SPQ) of Lepidium crassifolium has previously been identified due to its capacity to confer paraquat resistance to overexpressing transgenic Arabidopsis plants. Here, we show that overexpression of the closely related Arabidopsis SPQ can also enhance resistance to paraquat, while the Arabidopsis spq1 mutant is slightly hypersensitive to this herbicide. Besides being implicated in paraquat response, overexpression of SPQs enhanced sensitivity to abscisic acid (ABA), and the knockout spq1 mutant was less sensitive to ABA. Both Lepidium- and Arabidopsis-derived SPQs could improve drought tolerance by reducing water loss, stabilizing photosynthetic electron transport and enhancing plant viability and survival in a water-limited environment. Enhanced drought tolerance of SPQ-overexpressing plants could be confirmed by characterizing various parameters of growth, morphology and photosynthesis using an automatic plant phenotyping platform with RGB and chlorophyll fluorescence imaging. Our results suggest that SPQs can be regulatory small proteins connecting ROS and ABA regulation and through that influence responses to certain stresses.
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Affiliation(s)
- Dóra Faragó
- Institute of Plant Biology, Biological Research CentreSzegedHungary
| | - Laura Zsigmond
- Institute of Plant Biology, Biological Research CentreSzegedHungary
| | - Dániel Benyó
- Institute of Plant Biology, Biological Research CentreSzegedHungary
| | - Rubén Alcazar
- Facultat de FarmàciaUniversitat de BarcelonaBarcelonaSpain
| | - Gábor Rigó
- Institute of Plant Biology, Biological Research CentreSzegedHungary
| | - Ferhan Ayaydin
- Hungarian Centre of Excellence for Molecular Medicine (HCEMM) Nonprofit Ltd.SzegedHungary
- Cellular Imaging Laboratory, Biological Research CentreSzegedHungary
| | - Sahilu Ahmad Rabilu
- Institute of Plant Biology, Biological Research CentreSzegedHungary
- Doctoral School in Biology, Faculty of Science and InformaticsUniversity of SzegedSzegedHungary
| | | | - László Szabados
- Institute of Plant Biology, Biological Research CentreSzegedHungary
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15
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Pan L, Guo Q, Wang J, Shi L, Yang X, Zhou Y, Yu Q, Bai L. CYP81A68 confers metabolic resistance to ALS and ACCase-inhibiting herbicides and its epigenetic regulation in Echinochloa crus-galli. JOURNAL OF HAZARDOUS MATERIALS 2022; 428:128225. [PMID: 35032953 DOI: 10.1016/j.jhazmat.2022.128225] [Citation(s) in RCA: 32] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2021] [Revised: 12/23/2021] [Accepted: 01/04/2022] [Indexed: 06/14/2023]
Abstract
Long-term and excessive herbicide use has led to some environmental concerns and especially, herbicide resistance evolution in weeds. Here, we confirmed acetolactate synthase (ALS) inhibiting herbicide penoxsulam resistance and cross resistance to acetyl-coenzyme carboxylase (ACCase) inhibiting herbicides (cyhalofop-butyl and metamifop) in a global weed Echinochloa crus-galli population resistant to these herbicides (R). Penoxsulam metabolism study indicated that degradation rate was significantly higher in R than susceptible E. crus-galli population (S). RNA-sequencing revealed that a cytochrome P450 (P450) gene, CYP81A68, expressed higher in R versus S. Rice seedlings overexpressing this CYP81A68 gene are resistant to penoxsulam, cyhalofop-butyl and metamifop, and penoxsulam resistance is due to enhanced metabolism via O-demethylation. Deletion analysis of the CYP81A68 gene promoter identified an efficient region, in which differential methylation of CpG islands occurred between R and S. Collectively, these results demonstrate that upregulation of E. crus-galli CYP81A68 gene endows generalist metabolic resistance to commonly used ALS- and ACCase-inhibiting herbicides in rice fields and epigenetic regulation may play a role in the resistance evolution. This research could contribute to strategies reducing herbicide environmental impacts by judicious selection of alternative herbicide and non-chemical control tactics.
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Affiliation(s)
- Lang Pan
- College of Plant Protection, Hunan Agricultural University, Changsha 410128, China
| | - Qiushuang Guo
- College of Plant Protection, Hunan Agricultural University, Changsha 410128, China
| | - Junzhi Wang
- College of Plant Protection, Hunan Agricultural University, Changsha 410128, China
| | - Li Shi
- College of Plant Protection, Hunan Agricultural University, Changsha 410128, China
| | - Xiao Yang
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China
| | - Yaoyu Zhou
- College of Resources and Environment, Hunan Agricultural University, Changsha 410128, China.
| | - Qin Yu
- Australian Herbicide Resistance Initiative (AHRI), School of Agriculture and Environment, University of Western Australia, Crawley, WA 6009, Australia.
| | - Lianyang Bai
- College of Plant Protection, Hunan Agricultural University, Changsha 410128, China.
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16
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Mohammad VH, Osborne CP, Freckleton RP. Drought exposure leads to rapid acquisition and inheritance of herbicide resistance in the weed
Alopecurus myosuroides. Ecol Evol 2022; 12:e8563. [PMID: 35222951 PMCID: PMC8848470 DOI: 10.1002/ece3.8563] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2021] [Revised: 11/15/2021] [Accepted: 12/02/2021] [Indexed: 12/22/2022] Open
Abstract
Globally, herbicide resistance in weeds poses a threat to food security. Resistance evolves rapidly through the co‐option of a suite of physiological mechanisms that evolved to allow plants to survive environmental stress. Consequently, we hypothesize that stress tolerance and herbicide resistance are functionally linked. We address two questions: (i) does exposure to stress in a parental generation promote the evolution of resistance in the offspring? (ii) Is such evolution mediated through non‐genetic mechanisms? We exposed individuals of a grass weed to drought, and tested whether this resulted in herbicide resistance in the first generation. In terms of both survival and dry mass, we find enhanced resistance to herbicide in the offspring of parents that had been exposed to drought. Our results suggest that exposure of weeds to drought can confer herbicide resistance in subsequent generations, and that the mechanism conferring heritability of herbicide resistance is non‐genetic.
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Affiliation(s)
- Vian H. Mohammad
- Department of Animal & Plant Sciences University of Sheffield Sheffield UK
| | - Colin P. Osborne
- Department of Animal & Plant Sciences University of Sheffield Sheffield UK
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17
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Wang Y, Guo D, Wang J, Tian B, Li Y, Sun G, Zhang H. Exogenous melatonin alleviates NO 2 damage in tobacco leaves by promoting antioxidant defense, modulating redox homeostasis, and signal transduction. JOURNAL OF HAZARDOUS MATERIALS 2022; 424:127265. [PMID: 34583160 DOI: 10.1016/j.jhazmat.2021.127265] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2021] [Revised: 09/09/2021] [Accepted: 09/15/2021] [Indexed: 05/22/2023]
Abstract
Nitrogen dioxide (NO2) is a common outdoor air pollutant, which has adverse effects on the environment and human health. Herein, NO2 inhibited photosynthesis and antioxidant capacity in plants. Melatonin (Mel) is a neurohormone found in the pineal gland. Exogenous Mel alleviated chlorophyll degradation and increased the expression of key proteins and genes in the process of chlorophyll synthesis in tobacco leaves exposed to NO2. Additionally, the activities of photosystem II (PSII) and photosystem I (PSI) were enhanced. PSII and PSI reaction center proteins and genes were upregulated. Mel pre-treatment enhanced enzyme activities and expression of proteins related to the ascorbic acid-glutathione cycle and thioredoxin-peroxiredoxin pathway in leaves exposed to NO2, thus regulating their redox balance. Furthermore, exogenous Mel mediated the polyamine synthesis pathway and increased the expression of the key enzyme proteins SAMS1, SAMS2, and SAMS3 in the polyamine synthesis pathway in leaves under NO2 stress. Mel regulated ABA signal transduction and calmodulin binding transcription factors CAMTA12 and NtCaM calmodulin NtCaM2 in Ca2+ signal transduction. Collectively, these results elucidate that Mel can alleviate high-concentration NO2, thus suitable for agricultural application.
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Affiliation(s)
- Yue Wang
- College of Life Science, Northeast Forestry University, Harbin, Heilongjiang, China
| | - Dandan Guo
- College of Life Science, Northeast Forestry University, Harbin, Heilongjiang, China
| | - Jiechen Wang
- College of Life Science, Northeast Forestry University, Harbin, Heilongjiang, China
| | - Bei Tian
- College of Life Science, Northeast Forestry University, Harbin, Heilongjiang, China
| | - Yuanyuan Li
- College of Life Science, Northeast Forestry University, Harbin, Heilongjiang, China
| | - Guangyu Sun
- College of Life Science, Northeast Forestry University, Harbin, Heilongjiang, China
| | - Huihui Zhang
- College of Life Science, Northeast Forestry University, Harbin, Heilongjiang, China.
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18
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Ferreira V, Pavlaki MD, Martins R, Monteiro MS, Maia F, Tedim J, Soares AMVM, Calado R, Loureiro S. Effects of nanostructure antifouling biocides towards a coral species in the context of global changes. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 799:149324. [PMID: 34371395 DOI: 10.1016/j.scitotenv.2021.149324] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2021] [Revised: 06/24/2021] [Accepted: 07/24/2021] [Indexed: 06/13/2023]
Abstract
Biofouling prevention is one of the biggest challenges faced by the maritime industry, but antifouling agents commonly impact marine ecosystems. Advances in antifouling technology include the use of nanomaterials. Herein we test an antifouling nano-additive based on the encapsulation of the biocide 4,5-dichloro-2-octyl-4-isothiazolin-3-one (DCOIT) in engineered silica nanocontainers (SiNC). The work aims to assess the biochemical and physiological effects on the symbiotic coral Sarcophyton cf. glaucum caused by (1) thermal stress and (2) DCOIT exposure (free or nanoencapsulated forms), in a climate change scenario. Accordingly, the following hypotheses were addressed: (H1) ocean warming can cause toxicity on S. cf. glaucum; (H2) the nanoencapsulation process decreases DCOIT toxicity towards this species; (H3) the biocide toxicity, free or encapsulated forms, can be affected by ocean warming. Coral fragments were exposed for seven days to DCOIT in both free and encapsulated forms, SiNC and negative controls, under two water temperature regimes (26 °C and 30.5 °C). Coral polyp behavior and photosynthetic efficiency were determined in the holobiont, while biochemical markers were assessed individually in the endosymbiont and coral host. Results showed transient coral polyp retraction and diminished photosynthetic efficiency in the presence of heat stress or free DCOIT, with effects being magnified in the presence of both stressors. The activity of catalase and glutathione-S-transferase were modulated by temperature in each partner of the symbiosis. The shifts in enzymatic activity were more pronounced in the presence of free DCOIT, but to a lower extent for encapsulated DCOIT. Increased levels of oxidative damage were detected under heat conditions. The findings highlight the physiological constrains elicited by the increase of seawater temperature to symbiotic corals and demonstrate that DCOIT toxicity can be minimized through encapsulation in SiNC. The presence of both stressors magnifies toxicity and confirm that ocean warming enhances the vulnerability of tropical photosynthetic corals to local stressors.
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Affiliation(s)
- Violeta Ferreira
- ApplEE Research Group, Centre for Environmental and Marine Studies (CESAM) & Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal.
| | - Maria D Pavlaki
- ApplEE Research Group, Centre for Environmental and Marine Studies (CESAM) & Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
| | - Roberto Martins
- ApplEE Research Group, Centre for Environmental and Marine Studies (CESAM) & Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
| | - Marta S Monteiro
- ApplEE Research Group, Centre for Environmental and Marine Studies (CESAM) & Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
| | - Frederico Maia
- Smallmatek - Small Materials and Technologies, Lda., Rua Canhas, 3810-075 Aveiro, Portugal
| | - João Tedim
- CICECO - Aveiro Institute of Materials & Department of Materials and Ceramic Engineering, University of Aveiro, 3810-193 Aveiro, Portugal
| | - Amadeu M V M Soares
- ApplEE Research Group, Centre for Environmental and Marine Studies (CESAM) & Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
| | - Ricardo Calado
- ECOMARE, Centre for Environmental and Marine Studies (CESAM) & Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
| | - Susana Loureiro
- ApplEE Research Group, Centre for Environmental and Marine Studies (CESAM) & Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal
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19
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Ugalde JM, Lamig L, Herrera-Vásquez A, Fuchs P, Homagk M, Kopriva S, Müller-Schüssele SJ, Holuigue L, Meyer AJ. A dual role for glutathione transferase U7 in plant growth and protection from methyl viologen-induced oxidative stress. PLANT PHYSIOLOGY 2021; 187:2451-2468. [PMID: 34599589 PMCID: PMC8644736 DOI: 10.1093/plphys/kiab444] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2021] [Accepted: 08/23/2021] [Indexed: 05/17/2023]
Abstract
Plant glutathione S-transferases (GSTs) are glutathione-dependent enzymes with versatile functions, mainly related to detoxification of electrophilic xenobiotics and peroxides. The Arabidopsis (Arabidopsis thaliana) genome codes for 53 GSTs, divided into seven subclasses; however, understanding of their precise functions is limited. A recent study showed that class II TGA transcription factors TGA2, TGA5, and TGA6 are essential for tolerance of UV-B-induced oxidative stress and that this tolerance is associated with an antioxidative function of cytosolic tau-GSTs (GSTUs). Specifically, TGA2 controls the expression of several GSTUs under UV-B light, and constitutive expression of GSTU7 in the tga256 triple mutant is sufficient to revert the UV-B-susceptible phenotype of tga256. To further study the function of GSTU7, we characterized its role in mitigation of oxidative damage caused by the herbicide methyl viologen (MV). Under non-stress conditions, gstu7 null mutants were smaller than wild-type (WT) plants and delayed in the onset of the MV-induced antioxidative response, which led to accumulation of hydrogen peroxide and diminished seedling survival. Complementation of gstu7 by constitutive expression of GSTU7 rescued these phenotypes. Furthermore, live monitoring of the glutathione redox potential in intact cells with the fluorescent probe Grx1-roGFP2 revealed that GSTU7 overexpression completely abolished the MV-induced oxidation of the cytosolic glutathione buffer compared with WT plants. GSTU7 acted as a glutathione peroxidase able to complement the lack of peroxidase-type GSTs in yeast. Together, these findings show that GSTU7 is crucial in the antioxidative response by limiting oxidative damage and thus contributes to oxidative stress resistance in the cell.
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Affiliation(s)
- José Manuel Ugalde
- Institute of Crop Science and Resource Conservation (INRES), University of Bonn, 53113 Bonn, Germany
- Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago 8331150, Chile
| | - Liliana Lamig
- Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago 8331150, Chile
| | - Ariel Herrera-Vásquez
- Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago 8331150, Chile
| | - Philippe Fuchs
- Institute of Crop Science and Resource Conservation (INRES), University of Bonn, 53113 Bonn, Germany
| | - Maria Homagk
- Institute of Crop Science and Resource Conservation (INRES), University of Bonn, 53113 Bonn, Germany
| | - Stanislav Kopriva
- Institute for Plant Sciences, Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, 50674 Cologne, Germany
| | | | - Loreto Holuigue
- Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago 8331150, Chile
| | - Andreas J Meyer
- Institute of Crop Science and Resource Conservation (INRES), University of Bonn, 53113 Bonn, Germany
- Author for communication:
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20
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Schwarz M, Eno RFM, Freitag-Pohl S, Coxon CR, Straker HE, Wortley DJ, Hughes DJ, Mitchell G, Moore J, Cummins I, Onkokesung N, Brazier-Hicks M, Edwards R, Pohl E, Steel PG. Flavonoid-based inhibitors of the Phi-class glutathione transferase from black-grass to combat multiple herbicide resistance. Org Biomol Chem 2021; 19:9211-9222. [PMID: 34643629 PMCID: PMC8564858 DOI: 10.1039/d1ob01802g] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
The evolution and growth of multiple-herbicide resistance (MHR) in grass weeds continues to threaten global cereal production. While various processes can contribute to resistance, earlier work has identified the phi class glutathione-S-transferase (AmGSTF1) as a functional biomarker of MHR in black-grass (Alopecurus myosuroides). This study provides further insights into the role of AmGSTF1 in MHR using a combination of chemical and structural biology. Crystal structures of wild-type AmGSTF1, together with two specifically designed variants that allowed the co-crystal structure determination with glutathione and a glutathione adduct of the AmGSTF1 inhibitor 4-chloro-7-nitro-benzofurazan (NBD-Cl) were obtained. These studies demonstrated that the inhibitory activity of NBD-Cl was associated with the occlusion of the active site and the impediment of substrate binding. A search for other selective inhibitors of AmGSTF1, using ligand-fishing experiments, identified a number of flavonoids as potential ligands. Subsequent experiments using black-grass extracts discovered a specific flavonoid as a natural ligand of the recombinant enzyme. A series of related synthetic flavonoids was prepared and their binding to AmGSTF1 was investigated showing a high affinity for derivatives bearing a O-5-decyl-α-carboxylate. Molecular modelling based on high-resolution crystal structures allowed a binding pose to be defined which explained flavonoid binding specificity. Crucially, high binding affinity was linked to a reversal of the herbicide resistance phenotype in MHR black-grass. Collectively, these results present a nature-inspired new lead for the development of herbicide synergists to counteract MHR in weeds. Nature inspired flavonoid derivatives bind to AmGSTF1 and overcome herbicide resistance in multiple herbicide resistant (MHR) Black Grass.![]()
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Affiliation(s)
- Maria Schwarz
- Department of Chemistry, University of Durham, Science Laboratories, South Road, Durham, DH1 3LE, UK.
| | - Rebecca F M Eno
- Department of Chemistry, University of Durham, Science Laboratories, South Road, Durham, DH1 3LE, UK.
| | - Stefanie Freitag-Pohl
- Department of Chemistry, University of Durham, Science Laboratories, South Road, Durham, DH1 3LE, UK.
| | - Christopher R Coxon
- Department of Chemistry, University of Durham, Science Laboratories, South Road, Durham, DH1 3LE, UK.
| | - Hannah E Straker
- Department of Chemistry, University of Durham, Science Laboratories, South Road, Durham, DH1 3LE, UK.
| | - David J Wortley
- Centre for Novel Agricultural Products, Department of Biology, University of York, York YO10 5DD, UK
| | - David J Hughes
- Syngenta, Jealott's Hill International Research Station, Bracknell, Berks RG42 6EY, UK
| | - Glynn Mitchell
- Syngenta, Jealott's Hill International Research Station, Bracknell, Berks RG42 6EY, UK
| | - Jenny Moore
- Syngenta, Jealott's Hill International Research Station, Bracknell, Berks RG42 6EY, UK
| | - Ian Cummins
- Department of Biosciences, University of Durham, Science Laboratories, South Road, Durham, DH1 3LE, UK
| | - Nawaporn Onkokesung
- Agriculture, School of Natural and Environmental Sciences, Newcastle University, Newcastle-upon-Tyne, NE1 7RU, UK
| | - Melissa Brazier-Hicks
- Agriculture, School of Natural and Environmental Sciences, Newcastle University, Newcastle-upon-Tyne, NE1 7RU, UK
| | - Robert Edwards
- Agriculture, School of Natural and Environmental Sciences, Newcastle University, Newcastle-upon-Tyne, NE1 7RU, UK
| | - Ehmke Pohl
- Department of Chemistry, University of Durham, Science Laboratories, South Road, Durham, DH1 3LE, UK. .,Department of Biosciences, University of Durham, Science Laboratories, South Road, Durham, DH1 3LE, UK
| | - Patrick G Steel
- Department of Chemistry, University of Durham, Science Laboratories, South Road, Durham, DH1 3LE, UK.
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21
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Shahrtash M, Brown SP. A Path Forward: Promoting Microbial-Based Methods in the Control of Invasive Plant Species. PLANTS (BASEL, SWITZERLAND) 2021; 10:943. [PMID: 34065068 PMCID: PMC8151036 DOI: 10.3390/plants10050943] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/02/2021] [Revised: 04/29/2021] [Accepted: 05/06/2021] [Indexed: 01/18/2023]
Abstract
In this review, we discuss the unrealized potential of incorporating plant-microbe and microbe-microbe interactions into invasive plant management strategies. While the development of this as a viable strategy is in its infancy, we argue that incorporation of microbial components into management plans should be a priority and has great potential for diversifying sustainable control options. We advocate for increased research into microbial-mediated phytochemical production, microbial controls to reduce the competitiveness of invasive plants, microbial-mediated increases of herbicidal tolerance of native plants, and to facilitate increased pathogenicity of plant pathogens of invasive plants.
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Affiliation(s)
| | - Shawn P. Brown
- Department of Biological Sciences, The University of Memphis, Memphis, TN 38152, USA;
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22
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Dos Santos RN, Machado BR, Hefler SM, Zanette J. Glutathione S-transferase activity in aquatic macrophytes and halophytes and biotransformation potential for biocides. JOURNAL OF PLANT RESEARCH 2021; 134:577-584. [PMID: 33682041 DOI: 10.1007/s10265-021-01266-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2020] [Accepted: 02/09/2021] [Indexed: 06/12/2023]
Abstract
Glutathione S-transferase (GST) participates in the biotransformation of many xenobiotics including biocides. Its activity in plants is generally associated with their phytoremediation capabilities. Biocides have been used in agriculture and antifouling paints and they represent risks for the aquatic environment. The present study aimed to: (1) evaluate the basal GST activity in roots, stems, and leaves from thirteen plants (eleven aquatic macrophytes and two halophytes) collected at South Brazil wetlands; (2) estimate the biotransformation potential of Nothoscordum gracile for five biocides using competitive kinetic assays with 1-chloro-2,4-dinitrobenzene (CDNB), a typical GST substrate. The N. gracile, Spartina alterniflora and Cakile maritima presented the highest GST activities among the tested plants. The Lineweaver-Burk plot obtained from the GST competitive kinetic assays confirmed that the biocides chlorothalonil, 4,5-dichloro-N-octyl-3(2H)-isothiazolone (DCOIT), dichlofluanid, and diuron, but not irgarol, compete with the substrate CDNB for GST. Chlorothalonil and DCOIT showed the lowest IC20 values (11.1 and 10.6 μM, respectively), followed by dichlofluanid (38.6 μM) and diuron (353.1 μM). The inhibition of GST-CDNB activity by 100 nM biocide was higher for chlorothalonil, DCOIT, and dichlofluanid (46.5, 49.0, and 45.1%, respectively) than for diuron (6.5%) and irgarol (2.2%). The present study indicates plant species that have significant GST activity and could be potentially used for phytoremediation. The competitive kinetic tests suggest that among the five biocides that were tested, chlorothalonil, DCOIT, and dichlofluanid are probably preferred for biotransformation via GST in plant.
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Affiliation(s)
- Rodrigo Nunes Dos Santos
- Universidade Federal do Rio Grande (FURG), Instituto de Ciências Biológicas (ICB), Av. Itália Km 8, Rio Grande, RS, 96203-900, Brazil
- Programa de Pós-Graduação em Biologia de Ambientes Aquáticos Continentais, Instituto de Ciências Biológicas, Universidade Federal do Rio Grande (FURG), Rio Grande, RS, 96203-900, Brazil
| | - Bruno Roswag Machado
- Universidade Federal do Rio Grande (FURG), Instituto de Ciências Biológicas (ICB), Av. Itália Km 8, Rio Grande, RS, 96203-900, Brazil
| | - Sônia Marisa Hefler
- Universidade Federal do Rio Grande (FURG), Instituto de Ciências Biológicas (ICB), Av. Itália Km 8, Rio Grande, RS, 96203-900, Brazil
- Programa de Pós-Graduação em Biologia de Ambientes Aquáticos Continentais, Instituto de Ciências Biológicas, Universidade Federal do Rio Grande (FURG), Rio Grande, RS, 96203-900, Brazil
| | - Juliano Zanette
- Universidade Federal do Rio Grande (FURG), Instituto de Ciências Biológicas (ICB), Av. Itália Km 8, Rio Grande, RS, 96203-900, Brazil.
- Programa de Pós-Graduação em Biologia de Ambientes Aquáticos Continentais, Instituto de Ciências Biológicas, Universidade Federal do Rio Grande (FURG), Rio Grande, RS, 96203-900, Brazil.
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23
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Herrera-Vásquez A, Fonseca A, Ugalde JM, Lamig L, Seguel A, Moyano TC, Gutiérrez RA, Salinas P, Vidal EA, Holuigue L. TGA class II transcription factors are essential to restrict oxidative stress in response to UV-B stress in Arabidopsis. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:1891-1905. [PMID: 33188435 PMCID: PMC7921300 DOI: 10.1093/jxb/eraa534] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2020] [Accepted: 11/10/2020] [Indexed: 05/08/2023]
Abstract
Plants possess a robust metabolic network for sensing and controlling reactive oxygen species (ROS) levels upon stress conditions. Evidence shown here supports a role for TGA class II transcription factors as critical regulators of genes controlling ROS levels in the tolerance response to UV-B stress in Arabidopsis. First, tga256 mutant plants showed reduced capacity to scavenge H2O2 and restrict oxidative damage in response to UV-B, and also to methylviologen-induced photooxidative stress. The TGA2 transgene (tga256/TGA2 plants) complemented these phenotypes. Second, RNAseq followed by clustering and Gene Ontology term analyses indicate that TGA2/5/6 positively control the UV-B-induced expression of a group of genes with oxidoreductase, glutathione transferase, and glucosyltransferase activities, such as members of the glutathione S-transferase Tau subfamily (GSTU), which encodes peroxide-scavenging enzymes. Accordingly, increased glutathione peroxidase activity triggered by UV-B was impaired in tga256 mutants. Third, the function of TGA2/5/6 as transcriptional activators of GSTU genes in the UV-B response was confirmed for GSTU7, GSTU8, and GSTU25, using quantitative reverse transcription-PCR and ChIP analyses. Fourth, expression of the GSTU7 transgene complemented the UV-B-susceptible phenotype of tga256 mutant plants. Together, this evidence indicates that TGA2/5/6 factors are key regulators of the antioxidant/detoxifying response to an abiotic stress such as UV-B light overexposure.
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Affiliation(s)
- Ariel Herrera-Vásquez
- Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile
- Millennium Institute for Integrative Biology (iBio), Santiago, Chile
| | - Alejandro Fonseca
- Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - José Manuel Ugalde
- Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Liliana Lamig
- Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Aldo Seguel
- Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Tomás C Moyano
- Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile
- Millennium Institute for Integrative Biology (iBio), Santiago, Chile
- FONDAP Center for Genome Regulation, Santiago, Chile
| | - Rodrigo A Gutiérrez
- Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile
- Millennium Institute for Integrative Biology (iBio), Santiago, Chile
- FONDAP Center for Genome Regulation, Santiago, Chile
| | - Paula Salinas
- Escuela de Biotecnología, Facultad de Ciencias, Universidad Santo Tomás, Santiago, Chile
| | - Elena A Vidal
- Millennium Institute for Integrative Biology (iBio), Santiago, Chile
- Centro de Genómica y Bioinformática, Facultad de Ciencias, Universidad Mayor, Santiago, Chile
| | - Loreto Holuigue
- Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile
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24
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Suzukawa AK, Bobadilla LK, Mallory-Smith C, Brunharo CACG. Non-target-Site Resistance in Lolium spp. Globally: A Review. FRONTIERS IN PLANT SCIENCE 2021; 11:609209. [PMID: 33552102 PMCID: PMC7862324 DOI: 10.3389/fpls.2020.609209] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2020] [Accepted: 12/07/2020] [Indexed: 05/10/2023]
Abstract
The Lolium genus encompasses many species that colonize a variety of disturbed and non-disturbed environments. Lolium perenne L. spp. perenne, L. perenne L. spp. multiflorum, and L. rigidum are of particular interest to weed scientists because of their ability to thrive in agricultural and non-agricultural areas. Herbicides are the main tool to control these weeds; however, Lolium spp. populations have evolved multiple- and cross-resistance to at least 14 herbicide mechanisms of action in more than 21 countries, with reports of multiple herbicide resistance to at least seven mechanisms of action in a single population. In this review, we summarize what is currently known about non-target-site resistance in Lolium spp. to acetyl CoA carboxylase, acetohydroxyacid synthase, microtubule assembly, photosystem II, 5-enolpyruvylshikimate-3-phosphate synthase, glutamine synthetase, very-long chain fatty acids, and photosystem I inhibitors. We suggest research topics that need to be addressed, as well as strategies to further our knowledge and uncover the mechanisms of non-target-site resistance in Lolium spp.
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Affiliation(s)
- Andréia K. Suzukawa
- Department of Crop and Soil Science, Oregon State University, Corvallis, OR, United States
| | - Lucas K. Bobadilla
- Department of Crop Sciences, University of Illinois, Urbana, IL, United States
| | - Carol Mallory-Smith
- Department of Crop and Soil Science, Oregon State University, Corvallis, OR, United States
| | - Caio A. C. G. Brunharo
- Department of Crop and Soil Science, Oregon State University, Corvallis, OR, United States
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25
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Markovic M, Neale PA, Nidumolu B, Kumar A. Combined toxicity of therapeutic pharmaceuticals to duckweed, Lemna minor. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2021; 208:111428. [PMID: 33068976 DOI: 10.1016/j.ecoenv.2020.111428] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2020] [Revised: 09/24/2020] [Accepted: 09/28/2020] [Indexed: 06/11/2023]
Abstract
Pharmaceuticals, which are designed to be biologically active at low concentrations, are found in surface waters, meaning aquatic organisms can be exposed to complex mixtures of pharmaceuticals. In this study, the adverse effects of four pharmaceuticals, 17α-ethynylestradiol (synthetic estrogen), methotrexate (anticancer drug), diclofenac (nonsteroidal anti-inflammatory drug) and fluoxetine (antidepressant), and their binary mixtures at mg/L concentrations were assessed using the 7-day Lemna minor test, with both apical and biochemical markers evaluated. The studied biochemical markers included chlorophyll a, chlorophyll b, carotenoids and oxidative stress enzymes catalase, glutathione-S-transferase and glutathione reductase, with effects compared to solvent controls. The adverse effects on Lemna minor were dose-dependent for frond number, surface area, relative chlorophyll content and activity of glutathione S-transferase for both individual pharmaceuticals and binary mixtures. According to the individual toxicity values, all tested pharmaceuticals can be considered as toxic or harmful to aquatic organisms, with methotrexate considered highly toxic. The most sensitive endpoints for the binary mixtures were photosynthetic pigments and frond surface area, with effects observed in the low mg/L concentration range. The concentration addition model and toxic unit approach gave similar mixture toxicity predictions, with binary mixtures of methotrexate and fluoxetine or methotrexate and 17α-ethynylestradiol exhibiting synergistic effects. In contrast, mixtures of diclofenac with fluoxetine, 17α-ethynylestradiol or methotrexate mostly showed additive effects. While low concentrations of methotrexate are expected in surface water, chronic ecotoxicological data for invertebrates and fish are lacking, but this is required to better assess the environmental risk of methotrexate.
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Affiliation(s)
- Marijana Markovic
- CSIRO Land and Water, Waite Road, Urrbrae, SA 5064, Australia; Soil Science, School of Agriculture Food and Wine, University of Adelaide, PMB 1 Glen Osmond, SA 5064 Australia
| | - Peta A Neale
- Australian Rivers Institute, School of Environment and Science, Griffith University, Southport QLD 4222, Australia
| | - Bhanu Nidumolu
- CSIRO Land and Water, Waite Road, Urrbrae, SA 5064, Australia
| | - Anu Kumar
- CSIRO Land and Water, Waite Road, Urrbrae, SA 5064, Australia.
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26
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Torra J, Montull JM, Taberner A, Onkokesung N, Boonham N, Edwards R. Target-Site and Non-target-Site Resistance Mechanisms Confer Multiple and Cross- Resistance to ALS and ACCase Inhibiting Herbicides in Lolium rigidum From Spain. FRONTIERS IN PLANT SCIENCE 2021; 12:625138. [PMID: 33613607 PMCID: PMC7889805 DOI: 10.3389/fpls.2021.625138] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2020] [Accepted: 01/13/2021] [Indexed: 05/07/2023]
Abstract
Lolium rigidum is one the worst herbicide resistant (HR) weeds worldwide due to its proneness to evolve multiple and cross resistance to several sites of action (SoA). In winter cereals crops in Spain, resistance to acetolactate synthase (ALS)- and acetyl-CoA carboxylase (ACCase)-inhibiting herbicides has become widespread, with farmers having to rely on pre-emergence herbicides over the last two decades to maintain weed control. Recently, lack of control with very long-chain fatty acid synthesis (VLCFAS)-inhibiting herbicides has been reported in HR populations that are difficult to manage by chemical means. In this study, three Spanish populations of L. rigidum from winter cereals were confirmed as being resistant to ALS- and ACCase-inhibiting herbicides, with broad-ranging resistance toward the different chemistries tested. In addition, reduced sensitivity to photosystem II-, VLCFAS-, and phytoene desaturase-inhibiting herbicides were confirmed across the three populations. Resistance to ACCase-inhibiting herbicides was associated with point mutations in positions Trp-2027 and Asp-2078 of the enzyme conferring target site resistance (TSR), while none were detected in the ALS enzyme. Additionally, HR populations contained enhanced amounts of an ortholog of the glutathione transferase phi (F) class 1 (GSTF1) protein, a functional biomarker of non-target-site resistance (NTSR), as confirmed by enzyme-linked immunosorbent assays. Further evidence of NTSR was obtained in dose-response experiments with prosulfocarb applied post-emergence, following pre-treatment with the cytochrome P450 monooxygenase inhibitor malathion, which partially reversed resistance. This study confirms the evolution of multiple and cross resistance to ALS- and ACCase inhibiting herbicides in L. rigidum from Spain by mechanisms consistent with the presence of both TSR and NTSR. Moreover, the results suggest that NTSR, probably by means of enhanced metabolism involving more than one detoxifying enzyme family, confers cross resistance to other SoA. The study further demonstrates the urgent need to monitor and prevent the further evolution of herbicide resistance in L. rigidum in Mediterranean areas.
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Affiliation(s)
- Joel Torra
- Department d’Hortofructicultura, Botànica i Jardineria, Agrotecnio, Universitat de Lleida, Lleida, Spain
- *Correspondence: Joel Torra,
| | - José María Montull
- Department d’Hortofructicultura, Botànica i Jardineria, Agrotecnio, Universitat de Lleida, Lleida, Spain
| | - Andreu Taberner
- Department d’Hortofructicultura, Botànica i Jardineria, Agrotecnio, Universitat de Lleida, Lleida, Spain
| | - Nawaporn Onkokesung
- Agriculture, School of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom
| | - Neil Boonham
- Agriculture, School of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom
| | - Robert Edwards
- Agriculture, School of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom
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27
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Georgakis N, Poudel N, Vlachakis D, Papageorgiou AC, Labrou NE. Phi class glutathione transferases as molecular targets towards multiple-herbicide resistance: Inhibition analysis and pharmacophore design. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 158:342-352. [PMID: 33257232 DOI: 10.1016/j.plaphy.2020.11.018] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2020] [Accepted: 11/14/2020] [Indexed: 06/12/2023]
Abstract
Multiple-herbicide resistance (MHR) is a global threat to weed control in cereal crops. MHR weeds express a specific phi class glutathione transferase (MHR-GSTF) that confers resistance against multiple herbicides and therefore represents a promising target against MHR weeds. Kinetics inhibition analysis of MHR-GSTFs from grass weeds Lolium rigidum (LrGSTF) Alopecurus myosuroides (AmGSTF) and crops Hordeum vulgare (HvGSTF) and Triticum aestivum (TaGSTF) allowed the identification of the acetanilide herbicide butachlor as a potent and selective inhibitor towards MHR-GSTFs. Also, butachlor is a stronger inhibitor for LrGSTF and AmGSTF compared to HvGSTF and TaGSTF from crops. The crystal structure of LrGSTF was determined at 1.90 Å resolution in complex with the inhibitor S-(4-nitrobenzyl)glutathione. A specific 3D pharmacophore targeting the MHR-GSTFs was designed and used to identify structural elements important for potent and selective inhibition. Structural analysis of GSTFs revealed a decisive role of conserved Tyr118 in ligand binding and pharmacophore design. Its positioning is dependent on an outer patch of adjacent residues that span from position 132 to 134 which are similar for both LrGSTF and AmGSTF but different in HvGSTF and TaGSTF. The results presented here provide new knowledge that may be adopted to cope with MHR weeds.
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Affiliation(s)
- Nikolaos Georgakis
- Laboratory of Enzyme Technology, Department of Biotechnology, School of Applied Biology and Biotechnology, Agricultural University of Athens, 75 Iera Odos Street, GR, 11855, Athens, Greece
| | - Nirmal Poudel
- Turku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, 20521, Finland
| | - Dimitrios Vlachakis
- Laboratory of Genetics, Department of Biotechnology, School of Applied Biology and Biotechnology, Agricultural University of Athens, 75 Iera Odos Street, GR, 11855, Athens, Greece
| | | | - Nikolaos E Labrou
- Laboratory of Enzyme Technology, Department of Biotechnology, School of Applied Biology and Biotechnology, Agricultural University of Athens, 75 Iera Odos Street, GR, 11855, Athens, Greece.
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28
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Huang X, You Z, Luo Y, Yang C, Ren J, Liu Y, Wei G, Dong P, Ren M. Antifungal activity of chitosan against Phytophthora infestans, the pathogen of potato late blight. Int J Biol Macromol 2020; 166:1365-1376. [PMID: 33161079 DOI: 10.1016/j.ijbiomac.2020.11.016] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2020] [Revised: 10/29/2020] [Accepted: 11/03/2020] [Indexed: 12/13/2022]
Abstract
Phytophthora infestans, the pathogen of potato late blight which is a devastating disease of potatoes, causes stem and leaf rot, leading to significant economic losses. Chitosan is a naturally occurring polysaccharide with a broad spectrum of antimicrobial properties. However, the specific mechanism of chitosan on Phytophthora infestans has not been studied. In this study, we found that chitosan significantly inhibited the mycelial growth and spore germination of Phytophthora infestans in vitro, reduced the resistance of Phytophthora infestans to various adverse conditions, and it had synergistic effect with pesticides, making it a potential way to reduce the use of chemical pesticides. In addition, chitosan could induce resistance in potato pieces and leaves to Phytophthora infestans. Transcriptome analysis data showed that chitosan mainly affected cell growth of Phytophthora infestans, and most of the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways and Gene ontology (GO) terms revolved in metabolic processes, cell membrane structure and function and ribosome biogenesis. Differentially expressed genes (DEGs) related to adverse stress and virulence were also discussed. On the whole, this study provided new ideas for the development of chitosan as an eco-friendly preparation for controlling potato late blight.
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Affiliation(s)
- Xiaoqing Huang
- Key Laboratory of Plant Hormones and Development Regulation of Chongqing, School of Life Sciences, Chongqing University, 401331 Chongqing, China
| | - Ziyue You
- Chongqing No.1 Secondary School, Chongqing 400044, China
| | - Yang Luo
- Chongqing No.1 Secondary School, Chongqing 400044, China
| | - Chengji Yang
- Chongqing No.1 Secondary School, Chongqing 400044, China
| | - Jie Ren
- Key Laboratory of Plant Hormones and Development Regulation of Chongqing, School of Life Sciences, Chongqing University, 401331 Chongqing, China
| | - Yanlin Liu
- Key Laboratory of Plant Hormones and Development Regulation of Chongqing, School of Life Sciences, Chongqing University, 401331 Chongqing, China
| | - Guangjing Wei
- Chongqing No.1 Secondary School, Chongqing 400044, China
| | - Pan Dong
- Key Laboratory of Plant Hormones and Development Regulation of Chongqing, School of Life Sciences, Chongqing University, 401331 Chongqing, China.
| | - Maozhi Ren
- Key Laboratory of Plant Hormones and Development Regulation of Chongqing, School of Life Sciences, Chongqing University, 401331 Chongqing, China; Institute of Urban Agriculture, Chinese Academy of Agricultural Sciences, Chengdu 610213, China.
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29
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Chen W, Wu L, Wang J, Yu Q, Bai L, Pan L. Quizalofop-p-ethyl resistance in Polypogon fugax involves glutathione S-transferases. PEST MANAGEMENT SCIENCE 2020; 76:3800-3805. [PMID: 32476196 DOI: 10.1002/ps.5931] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/19/2020] [Revised: 05/27/2020] [Accepted: 06/01/2020] [Indexed: 06/11/2023]
Abstract
BACKGROUND Asia minor bluegrass (Polypogon fugax) is one of the main weeds invading Chinese canola fields. The P. fugax resistant population SC-R, which survived quizalofop-p-ethyl at the field-recommended rate (67.5 g ha-1 ), was collected from a canola field in Qingsheng County in China. The present study aimed to (1) characterize the SC-R resistance pattern to acetyl-CoA carboxylase (ACCase)-inhibiting herbicides, and (2) investigate the mechanism of quizalofop-p-ethyl resistance in this population. RESULTS Dose-response studies showed that resistance to quizalofop-p-ethyl and haloxyfop occurred in the SC-R population. Four transcripts/genes encoding the plastidic ACCase carboxyl-transferase domain were isolated from the P. fugax plants. No mutations in the four ACCase genes were detected in the SC-R population compared to the SC-S population. Pre-treatment with the known glutathione S-transferase (GST) inhibitor 4-chloro-7-nitrobenzoxadiazole (NBDCl), reversed resistance to quizalofop-p-ethyl and partially reversed resistance to haloxyfop-R-methyl in the resistant population (SC-R). However, the cytochrome P450 inhibitor malathion did not reverse the resistance. There was no difference in basal GST activity (using CDNB as a substrate), but there was higher inducible GST activity in SC-R relative to SC-S. Two GST genes, GST2c and GSTL3, were constitutively overexpressed in the resistant SC-R population. CONCLUSION This study confirmed that resistance to quizalofop-p-ethyl in the resistant P. fugax population is likely nontarget-site based involving GST, and this resistance mechanism also partially confers haloxyfop-R-methyl resistance. © 2020 Society of Chemical Industry.
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Affiliation(s)
- Wen Chen
- College of Plant Protection, Hunan Agricultural University, Changsha, 410128, China
| | - Lamei Wu
- Hunan Agricultural Biotechnology Research Institute, Hunan Academy of Agricultural Sciences, Changsha, 410125, China
| | - Junzhi Wang
- Longping Branch, Graduate School of Hunan University, Changsha, 410125, China
| | - Qin Yu
- Australian Herbicide Resistance Initiative, School of Agriculture and Environment, University of Western Australia, Western Australia, 6009, Australia
| | - Lianyang Bai
- College of Plant Protection, Hunan Agricultural University, Changsha, 410128, China
- Hunan Agricultural Biotechnology Research Institute, Hunan Academy of Agricultural Sciences, Changsha, 410125, China
| | - Lang Pan
- College of Plant Protection, Hunan Agricultural University, Changsha, 410128, China
- Hunan Agricultural Biotechnology Research Institute, Hunan Academy of Agricultural Sciences, Changsha, 410125, China
- Australian Herbicide Resistance Initiative, School of Agriculture and Environment, University of Western Australia, Western Australia, 6009, Australia
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Ren Z, Zhang D, Cao L, Zhang W, Zheng H, Liu Z, Han S, Dong Y, Zhu F, Liu H, Su H, Chen Y, Wu L, Zhu Y, Ku L. Functions and regulatory framework of ZmNST3 in maize under lodging and drought stress. PLANT, CELL & ENVIRONMENT 2020; 43:2272-2286. [PMID: 32562291 DOI: 10.1111/pce.13829] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2020] [Revised: 06/13/2020] [Accepted: 06/16/2020] [Indexed: 05/23/2023]
Abstract
The growth and development of maize are negatively affected by various abiotic stresses including drought, high salinity, extreme temperature, and strong wind. Therefore, it is important to understand the molecular mechanisms underlying abiotic stress resistance in maize. In the present work, we identified that a novel NAC transcriptional factor, ZmNST3, enhances maize lodging resistance and drought stress tolerance. ChIP-Seq and expression of target genes analysis showed that ZmNST3 could directly regulate the expression of genes related to cell wall biosynthesis which could subsequently enhance lodging resistance. Furthermore, we also demonstrated that ZmNST3 affected the expression of genes related to the synthesis of antioxidant enzyme secondary metabolites that could enhance drought resistance. More importantly, we are the first to report that ZmNST3 directly binds to the promoters of CESA5 and Dynamin-Related Proteins2A (DRP2A) and activates the expression of genes related to secondary cell wall cellulose biosynthesis. Additionally, we revealed that ZmNST3 directly binds to the promoters of GST/GlnRS and activates genes which could enhance the production of antioxidant enzymes in vivo. Overall, our work contributes to a comprehensive understanding of the regulatory network of ZmNST3 in regulating maize lodging and drought stress resistance.
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Affiliation(s)
- Zhenzhen Ren
- College of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of Wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China
| | - Dongling Zhang
- College of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of Wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China
| | - Liru Cao
- College of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of Wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China
| | - Weiqiang Zhang
- CIMMYT-China Specialty Maize Research Center, Crop Breeding and Cultivation Research Institute, Shanghai Academy of Agricultural Sciences, Shanghai, China
| | - Hongjian Zheng
- CIMMYT-China Specialty Maize Research Center, Crop Breeding and Cultivation Research Institute, Shanghai Academy of Agricultural Sciences, Shanghai, China
| | - Zhixue Liu
- College of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of Wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China
| | - Shengbo Han
- College of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of Wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China
| | - Yahui Dong
- College of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of Wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China
| | - Fangfang Zhu
- College of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of Wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China
| | - Huafeng Liu
- College of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of Wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China
| | - Huihui Su
- College of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of Wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China
| | - Yanhui Chen
- College of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of Wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China
| | - Liancheng Wu
- College of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of Wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China
| | - Yingfang Zhu
- State Key Laboratory of Crop Stress Adaptation and Improvement, Key Laboratory of Plant Stress Biology, School of Life Sciences, Henan University, Kaifeng, China
| | - Lixia Ku
- College of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of Wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China
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Shokat S, Großkinsky DK, Roitsch T, Liu F. Activities of leaf and spike carbohydrate-metabolic and antioxidant enzymes are linked with yield performance in three spring wheat genotypes grown under well-watered and drought conditions. BMC PLANT BIOLOGY 2020; 20:400. [PMID: 32867688 PMCID: PMC7457523 DOI: 10.1186/s12870-020-02581-3] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2020] [Accepted: 07/27/2020] [Indexed: 05/08/2023]
Abstract
BACKGROUND To improve our understanding about the physiological mechanism of grain yield reduction at anthesis, three spring wheat genotypes [L1 (advanced line), L2 (Vorobey) and L3 (Punjab-11)] having contrasting yield potential under drought in field were investigated under controlled greenhouse conditions, drought stress was imposed at anthesis stage by withholding irrigation until all plant available water was depleted, while well-watered control plants were kept at 95% pot water holding capacity. RESULTS Compared to genotype L1 and L2, pronounced decrease in grain number (NGS), grain yield (GY) and harvest index (HI) were found in genotype L3, mainly due to its greater kernel abortion (KA) under drought. A significant positive correlation of leaf monodehydroascorbate reductase (MDHAR) with both NGS and HI was observed. In contrast, significant negative correlations of glutathione S-transferase (GST) and vacuolar invertase (vacInv) both within source and sink were found with NGS and HI. Likewise, a significant negative correlation of leaf abscisic acid (ABA) with NGS was noticed. Moreover, leaf aldolase and cell wall peroxidase (cwPOX) activities were significantly and positively associated with thousand kernel weight (TKW). CONCLUSION Distinct physiological markers correlating with yield traits and higher activity of leaf aldolase and cwPOX may be chosen as predictive biomarkers for higher TKW. Also, higher activity of MDHAR within the leaf can be selected as a predictive biomarker for higher NGS in wheat under drought. Whereas, lower activity of vacInv and GST both within leaf and spike can be selected as biomarkers for higher NGS and HI. The results highlighted the role of antioxidant and carbohydrate-metabolic enzymes in the modulation of source-sink balance in wheat crops, which could be used as bio-signatures for breeding and selection of drought-resilient wheat genotypes for a future drier climate.
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Affiliation(s)
- Sajid Shokat
- Crop Science, Department of Plant and Environmental Sciences, University of Copenhagen, Højbakkegård Allé 13, 2630, Taastrup, Denmark.
- Wheat Breeding Group, Plant Breeding and Genetic Division, Nuclear Institute for Agriculture and Biology, Faisalabad, 38000, Pakistan.
| | - Dominik K Großkinsky
- Transport Biology, Department of Plant and Environmental Sciences, Copenhagen Plant Science Centre, Thorvaldsensvej 40, 1871, Frederiksberg C, Denmark
- AIT Austrian Institute of Technology GmbH, Center for Health and Bioresources, Bioresources Unit, Konrad-Lorenz-Straße 24, 3430, Tulln, Austria
| | - Thomas Roitsch
- Crop Science, Department of Plant and Environmental Sciences, University of Copenhagen, Højbakkegård Allé 13, 2630, Taastrup, Denmark
| | - Fulai Liu
- Crop Science, Department of Plant and Environmental Sciences, University of Copenhagen, Højbakkegård Allé 13, 2630, Taastrup, Denmark
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Davies LR, Onkokesung N, Brazier-Hicks M, Edwards R, Moss S. Detection and characterization of resistance to acetolactate synthase inhibiting herbicides in Anisantha and Bromus species in the United Kingdom. PEST MANAGEMENT SCIENCE 2020; 76:2473-2482. [PMID: 32061023 DOI: 10.1002/ps.5788] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/26/2019] [Revised: 02/05/2020] [Accepted: 02/14/2020] [Indexed: 05/13/2023]
Abstract
BACKGROUND Anisantha and Bromus spp. are widespread and difficult to control, potentially due to the evolution of herbicide resistance. In this study, UK populations of four brome species have been tested for the early development of resistance to acetolactate synthase (ALS)-inhibiting herbicides commonly used in their control. RESULTS Glasshouse assays confirmed reduced sensitivity to ALS-inhibiting herbicides in single populations of A. diandra, B. commutatus and B. secalinus, and in three populations of A. sterilis. By contrast, all 60 brome populations tested were sensitive to the ACCase-inhibiting herbicide propaquizafop and glyphosate. Dose-response with two ALS herbicides showed broad-ranging resistance in the A. diandra, A. sterilis and B. commutatus populations. In the B. commutatus population, this was associated with a point mutation in the ALS enzyme conferring target site resistance (TSR). Additionally, resistant populations of A. sterilis and B. commutatus populations contained enhanced amounts of an orthologue of the glutathione transferase phi (F) class 1 (GSTF1) protein, a functional biomarker of nontarget site resistance (NTSR) in Alopecurus myosuroides. There was further evidence of NTSR as these plants also demonstrated an enhanced capacity to detoxify herbicides. CONCLUSION This study confirms the evolution of resistance to ALS inhibiting herbicides in brome species in the UK by mechanisms consistent with the evolution of both TSR and NTSR. These findings point to the need for increased vigilance in detecting and mitigating against the evolution of herbicide resistance in brome species in Northern Europe. © 2020 Society of Chemical Industry.
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Affiliation(s)
- Laura R Davies
- Crop Protection department, Weed biology, ADAS Boxworth, Boxworth, UK
| | - Nawaporn Onkokesung
- Agriculture, School of Natural and Environmental Sciences, Newcastle University, Newcastle Upon Tyne, UK
| | - Melissa Brazier-Hicks
- Agriculture, School of Natural and Environmental Sciences, Newcastle University, Newcastle Upon Tyne, UK
| | - Robert Edwards
- Agriculture, School of Natural and Environmental Sciences, Newcastle University, Newcastle Upon Tyne, UK
| | - Stephen Moss
- Independent consultant, Stephen Moss Consulting, Harpenden, UK
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Vaish S, Gupta D, Mehrotra R, Mehrotra S, Basantani MK. Glutathione S-transferase: a versatile protein family. 3 Biotech 2020; 10:321. [PMID: 32656054 DOI: 10.1007/s13205-020-02312-3] [Citation(s) in RCA: 53] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2020] [Accepted: 06/19/2020] [Indexed: 12/20/2022] Open
Abstract
Glutathione-S transferase (GST) is a most ancient protein superfamily of multipurpose roles and evolved principally from gene duplication of an ancestral GSH binding protein. They have implemented in diverse plant functions such as detoxification of xenobiotic, secondary metabolism, growth and development, and majorly against biotic and abiotic stresses. The vital structural features of GSTs like highly divergent functional topographies, conserved integrated architecture with separate binding pockets for substrates and ligand, the stringent structural fidelity with high Tm values (50º-60º), and stress-responsive cis-regulatory elements in the promoter region offer this protein as most flexible plant protein for plant breeding approaches, biotechnological applications, etc. This review article summarizes the recent information of GST evolution, and their distribution and structural features with emphasis on the assorted roles of Ser and Cys GSTs with the signature motifs in their active sites, alongside their recent biotechnological application in the area of agriculture, environment, and nanotechnology have been highlighted.
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Time-Dependent Effects of Bentazon Application on the Key Antioxidant Enzymes of Soybean and Common Ragweed. SUSTAINABILITY 2020. [DOI: 10.3390/su12093872] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
The presence or absence of light is one of the most significant environmental factors affecting plant growth and defence. Therefore, the selection of the most appropriate time of application may maximize the benefits of photosynthetic inhibitors. In this work, the concentration and daytime or night-time-dependent effects of bentazon were tested in soybean and common ragweed. The recommended dose (1440 g ha−1) and also half the recommended dose significantly reduced the maximum quantum yield (Fv/Fm) and increased H2O2 levels in common ragweed. Interestingly, bentazon did not change Fv/Fm in soybean. The activity of superoxide dismutase changed in a dose-dependent manner only in common ragweed. The activity of ascorbate peroxidase, catalase and glutathione S-transferase (GST), as well as the contents of ascorbate (AsA) and glutathione (GSH) did not change significantly in this plant species. In soybean, alterations in H2O2 levels were lower but GST and APX activity, as well as AsA and GSH levels were higher compared to common ragweed. At the same time, the rate of lipid peroxidation and ion leakage increased upon bentazon, and were higher in the light phase-treated leaves in the case of both plant species. These results can contribute to optimizing the effects and uses of herbicides in agriculture.
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Ma X, Zhang B, Miao R, Deng X, Duan Y, Cheng Y, Zhang W, Shi M, Huang K, Xia XQ. Transcriptomic and Physiological Responses to Oxidative Stress in a Chlamydomonas reinhardtii Glutathione Peroxidase Mutant. Genes (Basel) 2020; 11:genes11040463. [PMID: 32344528 PMCID: PMC7230881 DOI: 10.3390/genes11040463] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2020] [Revised: 04/16/2020] [Accepted: 04/21/2020] [Indexed: 11/17/2022] Open
Abstract
Aerobic photosynthetic organisms such as algae produce reactive oxygen species (ROS) as by-products of metabolism. ROS damage biomolecules such as proteins and lipids in cells, but also act as signaling molecules. The mechanisms that maintain the metabolic balance in aerobic photosynthetic organisms and how the cells specifically respond to different levels of ROS are unclear. Glutathione peroxidase (GPX) enzymes detoxify hydrogen peroxide or organic hydroperoxides, and thus are important components of the antioxidant system. In this study, we employed a Chlamydomonas reinhardtii glutathione peroxidase knockout (gpx5) mutant to identify the genetic response to singlet oxygen (1O2) generated by the photosensitizer rose bengal (RB). To this end, we compared the transcriptomes of the parental strain CC4348 and the gpx5 mutant sampled before, and 1 h after, the addition of RB. Functional annotation of differentially expressed genes showed that genes encoding proteins related to ROS detoxification, stress-response-related molecular chaperones, and ubiquitin–proteasome pathway genes were upregulated in CC4338. When GPX5 was mutated, higher oxidative stress specifically induced the TCA cycle and enhanced mitochondrial electron transport. Transcription of selenoproteins and flagellar-associated proteins was depressed in CC4348 and the gpx5 mutant. In addition, we found iron homeostasis played an important role in maintaining redox homeostasis, and we uncovered the relationship between 1O2 stress and iron assimilation, as well as selenoproteins. Based on the observed expression profiles in response to different levels of oxidative stress, we propose a model for dose-dependent responses to different ROS levels in Chlamydomonas.
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Affiliation(s)
- Xiaocui Ma
- Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, Hubei, China; (X.M.); (B.Z.); (R.M.); (X.D.); (Y.D.); (Y.C.); (W.Z.); (M.S.)
- University of Chinese Academy of Sciences, Beijing 100039, China
| | - Baolong Zhang
- Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, Hubei, China; (X.M.); (B.Z.); (R.M.); (X.D.); (Y.D.); (Y.C.); (W.Z.); (M.S.)
- Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, Hubei, China
- University of Chinese Academy of Sciences, Beijing 100039, China
| | - Rongli Miao
- Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, Hubei, China; (X.M.); (B.Z.); (R.M.); (X.D.); (Y.D.); (Y.C.); (W.Z.); (M.S.)
- Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, Hubei, China
- University of Chinese Academy of Sciences, Beijing 100039, China
| | - Xuan Deng
- Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, Hubei, China; (X.M.); (B.Z.); (R.M.); (X.D.); (Y.D.); (Y.C.); (W.Z.); (M.S.)
- Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, Hubei, China
| | - You Duan
- Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, Hubei, China; (X.M.); (B.Z.); (R.M.); (X.D.); (Y.D.); (Y.C.); (W.Z.); (M.S.)
- University of Chinese Academy of Sciences, Beijing 100039, China
| | - Yingyin Cheng
- Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, Hubei, China; (X.M.); (B.Z.); (R.M.); (X.D.); (Y.D.); (Y.C.); (W.Z.); (M.S.)
| | - Wanting Zhang
- Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, Hubei, China; (X.M.); (B.Z.); (R.M.); (X.D.); (Y.D.); (Y.C.); (W.Z.); (M.S.)
| | - Mijuan Shi
- Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, Hubei, China; (X.M.); (B.Z.); (R.M.); (X.D.); (Y.D.); (Y.C.); (W.Z.); (M.S.)
| | - Kaiyao Huang
- Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, Hubei, China; (X.M.); (B.Z.); (R.M.); (X.D.); (Y.D.); (Y.C.); (W.Z.); (M.S.)
- Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, Hubei, China
- Correspondence: (K.H.); (X.-Q.X.)
| | - Xiao-Qin Xia
- Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, Hubei, China; (X.M.); (B.Z.); (R.M.); (X.D.); (Y.D.); (Y.C.); (W.Z.); (M.S.)
- University of Chinese Academy of Sciences, Beijing 100039, China
- Correspondence: (K.H.); (X.-Q.X.)
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Ma Q, Shi C, Su C, Liu Y. Complementary analyses of the transcriptome and iTRAQ proteome revealed mechanism of ethylene dependent salt response in bread wheat (Triticum aestivum L.). Food Chem 2020; 325:126866. [PMID: 32387982 DOI: 10.1016/j.foodchem.2020.126866] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2019] [Revised: 04/13/2020] [Accepted: 04/18/2020] [Indexed: 12/11/2022]
Abstract
In order to clarify the ethylene dependent salt response mechanism in wheat, 2-week-old wheat seedlings of cultivar 'Qingmai 6' treated with water, sodium chloride (NaCl), NaCl and ethylene precursor 1-aminocyclopropane-1-carboxylic acid (ACC), and NaCl and ethylene signaling inhibitor 1-methylcyclopropene (1-MCP) were collected and analyzed by transcriptional sequencing and isobaric tags for relative and absolute quantitation (iTRAQ) proteomics. At least 1140 proteins and 73,401 genes were identified, and proteins including ribosomal proteins (RPs), nucleoside diphosphate kinases (CDPKs), transaldolases (TALs), beta-glucosidases (BGLUs), phosphoenlpyruvate carboxylases (PEPCs), superoxide dismutases (SODs), and 6-phosphogluconate dehydrogenases (6-PGDHs) were significantly differently expressed. These genes and proteins revealed that ethylene dependent salt response through RPs activation, chaperones synthesis, the reactive oxygen species (ROS) scavenging, and carbohydrate metabolites pathway. Our results provided transcriptomics and proteomics information with respect to the molecular mechanisms of ethylene regualted salt response.
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Affiliation(s)
- Qian Ma
- College of Life Science, Qingdao Agricultural University, Qingdao 266109, China
| | - Changhai Shi
- College of Agriculture, Qingdao Agricultural University, Qingdao 266109, China
| | - Chunxue Su
- College of Life Science, Qingdao Agricultural University, Qingdao 266109, China
| | - Yiguo Liu
- College of Agriculture, Qingdao Agricultural University, Qingdao 266109, China.
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Huihui Z, Xin L, Yupeng G, Mabo L, Yue W, Meijun A, Yuehui Z, Guanjun L, Nan X, Guangyu S. Physiological and proteomic responses of reactive oxygen species metabolism and antioxidant machinery in mulberry (Morus alba L.) seedling leaves to NaCl and NaHCO 3 stress. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2020; 193:110259. [PMID: 32097787 DOI: 10.1016/j.ecoenv.2020.110259] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2019] [Revised: 01/13/2020] [Accepted: 01/27/2020] [Indexed: 05/20/2023]
Abstract
In this paper, the effects of 100 mM NaCl and NaHCO3 stress on reactive oxygen species (ROS) and physiological and proteomic aspects of ROS metabolism in mulberry seedling leaves were studied. The results showed that NaCl stress had little effect on photosynthesis and respiration of mulberry seedling leaves. Superoxide dismutase (SOD) activity and the expression of related proteins in leaves increased by varying degrees, and accumulation of superoxide anion (O2·-) not observed. Under NaHCO3 stress, photosynthesis and respiration were significantly inhibited, while the rate of O2·- production rate and H2O2 content increased. The activity of catalase (CAT) and the expression of CAT (W9RJ43) increased under NaCl stress. In response to NaHCO3 stress, the activity and expression of CAT were significantly decreased, but the ability of H2O2 scavenging of peroxidase (POD) was enhanced. The ascorbic acid-glutathione (AsA-GSH) cycle in mulberry seedling leaves was enhancement in both NaCl and NaHCO3 stress. The expression of 2-Cys peroxiredoxin BAS1 (2-Cys Prx BAS1), together with thioredoxin F (TrxF), thioredoxin O1 (TrxO1), thioredoxin-like protein CITRX (Trx CITRX), and thioredoxin-like protein CDSP32 (Trx CDSP32) were significantly increased under NaCl stress. Under NaHCO3 stress, the expression of the electron donor of ferredoxin-thioredoxin reductase (FTR), together with Trx-related proteins, such as thioredoxin M (TrxM), thioredoxin M4 (TrxM4), thioredoxin X (TrxX), TrxF, and Trx CSDP32 were significantly decreased, suggesting that the thioredoxin-peroxiredoxin (Trx-Prx) pathway's function of scavenging H2O2 of in mulberry seedling leaves was inhibited. Taken together, under NaCl stress, excessive production of O2·- mulberry seedlings leaves was inhibited, and H2O2 was effectively scavenged by CAT, AsA-GSH cycle and Trx-Prx pathway. Under NaHCO3 stress, despite the enhanced functions of POD and AsA-GSH cycle, the scavenging of O2·- by SOD was not effective, and that of H2O2 by CAT and Trx-Prx pathway were inhibited; and in turn, the oxidative damage to mulberry seedling leaves could not be reduced.
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Affiliation(s)
- Zhang Huihui
- College of Resources and Environment, Northeast Agricultural University, Harbin, Heilongjiang, China; Key Laboratory of Saline-alkali Vegetation Ecology Restoration, Ministry of Education, College of Life Sciences, Northeast Forestry University, Harbin, Heilongjiang, China
| | - Li Xin
- College of Resources and Environment, Northeast Agricultural University, Harbin, Heilongjiang, China; Key Laboratory of Saline-alkali Vegetation Ecology Restoration, Ministry of Education, College of Life Sciences, Northeast Forestry University, Harbin, Heilongjiang, China
| | - Guan Yupeng
- College of Resources and Environment, Northeast Agricultural University, Harbin, Heilongjiang, China
| | - Li Mabo
- College of Resources and Environment, Northeast Agricultural University, Harbin, Heilongjiang, China
| | - Wang Yue
- Key Laboratory of Saline-alkali Vegetation Ecology Restoration, Ministry of Education, College of Life Sciences, Northeast Forestry University, Harbin, Heilongjiang, China
| | - An Meijun
- Developmental Center of Heilongjiang Provincial Sericulture and Bee Industry, Harbin, Heilongjiang, China
| | - Zhang Yuehui
- Developmental Center of Heilongjiang Provincial Sericulture and Bee Industry, Harbin, Heilongjiang, China
| | - Liu Guanjun
- State Key Laboratory of Tree Genetics and Breeding (Northeast Forestry University), School of Forestry, Northeast Forestry University, Harbin, Heilongjiang, China
| | - Xu Nan
- Key Laboratory of Saline-alkali Vegetation Ecology Restoration, Ministry of Education, College of Life Sciences, Northeast Forestry University, Harbin, Heilongjiang, China; Natural Resources and Ecology Institute, Heilongjiang Sciences Academy, Harbin, Heilongjiang, China.
| | - Sun Guangyu
- Key Laboratory of Saline-alkali Vegetation Ecology Restoration, Ministry of Education, College of Life Sciences, Northeast Forestry University, Harbin, Heilongjiang, China.
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Georgakis N, Poudel N, Papageorgiou AC, Labrou NE. Comparative structural and functional analysis of phi class glutathione transferases involved in multiple-herbicide resistance of grass weeds and crops. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2020; 149:266-276. [PMID: 32088578 DOI: 10.1016/j.plaphy.2020.02.012] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/02/2019] [Revised: 01/22/2020] [Accepted: 02/11/2020] [Indexed: 06/10/2023]
Abstract
Multiple-herbicide resistant (MHR) weeds are a global problem and a looming threat to weed control in crops. MHR weeds express a specific phi class glutathione transferase (MHR-GSTF) which seems to contribute to herbicide resistance. The present work aims to investigate the structure and catalytic properties of the MHR-GSTFs from different grass weeds and crops (Alopecurus myosuroides, Lolium rigidum, Hordeum vulgare, Triticum aestivum). Recombinant MHR-GSTFs were expressed in E. coli and purified by affinity chromatography. Kinetic analysis of substrate specificity using a range of thiol substrates and xenobiotic compounds suggested that all enzymes display a broad range of specificity and are capable of detoxifying major stress-induced toxic products. Notably, all tested enzymes exhibited high activity towards organic hydroperoxides. The crystal structure of MHR-GSTF from Alopecurus myosuroides (AmGSTF) was determined by molecular replacement at 1.33 Å resolution. The enzyme was resolved with bound glutathione sulfenic acid (GSOH) at the G-site and succinic acid at the H-site. The enzyme shows conserved structural features compared to other Phi class GSTs. However, some differences were observed at the C-terminal helix H9 that may affect substrate specificity. The structural and functional features of AmGSTF were compared with those of the homologue crop enzymes (HvGSTF and TaGSTF) and discussed in light of their contribution to the MHR mechanism.
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Affiliation(s)
- Nikolaos Georgakis
- Laboratory of Enzyme Technology, Department of Biotechnology, School of Applied Biology and Biotechnology, Agricultural University of Athens, 75 Iera Odos Street, GR-11855, Athens, Greece
| | - Nirmal Poudel
- Turku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, 20521, Finland
| | | | - Nikolaos E Labrou
- Laboratory of Enzyme Technology, Department of Biotechnology, School of Applied Biology and Biotechnology, Agricultural University of Athens, 75 Iera Odos Street, GR-11855, Athens, Greece.
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Ethylene Biosynthesis Inhibition Combined with Cyanide Degradation Confer Resistance to Quinclorac in Echinochloa crus-galli var. mitis. Int J Mol Sci 2020; 21:ijms21051573. [PMID: 32106618 PMCID: PMC7084851 DOI: 10.3390/ijms21051573] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2020] [Revised: 02/20/2020] [Accepted: 02/21/2020] [Indexed: 11/18/2022] Open
Abstract
Echinochloa crus-galli var. mitis has rarely been reported for herbicide resistance, and no case of quinclorac resistance has been reported so far. Synthetic auxin-type herbicide quinclorac is used extensively to control rice weeds worldwide. A long history of using quinclorac in Chinese rice fields escalated the resistance in E. crus-galli var. mitis against this herbicide. Bioassays in Petri plates and pots exhibited four biotypes that evolved into resistance to quinclorac ranking as JS01-R > AH01-R > JS02-R > JX01-R from three provinces of China. Ethylene production in these biotypes was negatively correlated with resistance level and positively correlated with growth inhibition. Determination of the related ethylene response pathway exhibited resistance in biotypes that recorded a decline in 1-aminocyclopropane-1-carboxylic acid (ACC) content, ACC synthase oxidase activities, and less inducible ACS and ACO genes expressions than the susceptible biotype, suggesting that there was a positive correlation between quinclorac resistance and ethylene biosynthesis inhibition. Cyanides produced during the ethylene biosynthesis pathway mainly degraded by the activity of β-cyanoalanine synthase (β-CAS). Resistant biotypes exhibited higher β-CAS activity than the susceptible ones. Nucleotide changes were found in the EcCAS gene of resistant biotypes as compared to sensitive ones that caused three amino acid substitutions (Asn-105-Lys, Gln-195-Glu, and Gly-298-Val), resulting in alteration of enzyme structure, increased binding residues in the active site with its cofactor, and decreased binding free energy; hence, its activity was higher in resistant biotypes. Moreover, these mutations increased the structural stability of the enzyme. In view of the positive correlation between ethylene biosynthesis inhibition and cyanide degradation with resistance level, it is concluded that the alteration in ethylene response pathway or at least variation in ACC synthase and ACC oxidase enzyme activities—due to less relative expression of ACS and ACO genes and enhanced β-CAS activity, as well as mutation and increased relative expression of EcCAS gene—can be considered as a probable mechanism of quinclorac resistance in E. crus-galli var. mitis.
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Van Etten M, Lee KM, Chang SM, Baucom RS. Parallel and nonparallel genomic responses contribute to herbicide resistance in Ipomoea purpurea, a common agricultural weed. PLoS Genet 2020; 16:e1008593. [PMID: 32012153 PMCID: PMC7018220 DOI: 10.1371/journal.pgen.1008593] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2019] [Revised: 02/13/2020] [Accepted: 01/03/2020] [Indexed: 12/30/2022] Open
Abstract
The repeated evolution of herbicide resistance has been cited as an example of genetic parallelism, wherein separate species or genetic lineages utilize the same genetic solution in response to selection. However, most studies that investigate the genetic basis of herbicide resistance examine the potential for changes in the protein targeted by the herbicide rather than considering genome-wide changes. We used a population genomics screen and targeted exome re-sequencing to uncover the potential genetic basis of glyphosate resistance in the common morning glory, Ipomoea purpurea, and to determine if genetic parallelism underlies the repeated evolution of resistance across replicate resistant populations. We found no evidence for changes in 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS), glyphosate's target protein, that were associated with resistance, and instead identified five genomic regions that showed evidence of selection. Within these regions, genes involved in herbicide detoxification-cytochrome P450s, ABC transporters, and glycosyltransferases-are enriched and exhibit signs of selective sweeps. One region under selection shows parallel changes across all assayed resistant populations whereas other regions exhibit signs of divergence. Thus, while it appears that the physiological mechanism of resistance in this species is likely the same among resistant populations, we find patterns of both similar and divergent selection across separate resistant populations at particular loci.
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Affiliation(s)
- Megan Van Etten
- Biology Department, Penn State-Scranton, Dunmore, Pennsylvania, United States of America
| | - Kristin M. Lee
- Department of Biological Sciences, Columbia University, New York, New York, United States of America
| | - Shu-Mei Chang
- Plant Biology Department, University of Georgia, Athens, Georgia, United States of America
| | - Regina S. Baucom
- Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan, United States of America
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Wu X, Feng F, Zhu Y, Xie F, Yang J, Gong J, Liu Y, Zhu W, Gao T, Chen D, Li X, Huang J. Construction of High-Density Genetic Map and Identification of QTLs Associated with Seed Vigor after Exposure to Artificial Aging Conditions in Sweet Corn Using SLAF-seq. Genes (Basel) 2019; 11:genes11010037. [PMID: 31905667 PMCID: PMC7016829 DOI: 10.3390/genes11010037] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2019] [Revised: 12/24/2019] [Accepted: 12/25/2019] [Indexed: 01/23/2023] Open
Abstract
Seed vigor is a key factor that determines the quality of seeds, which is of great significance for agricultural production, with the potential to promote growth and productivity. However, the underlying molecular mechanisms and genetic basis for seed vigor remain unknown. High-density genetic linkage mapping is an effective method for genomic study and quantitative trait loci (QTL) mapping. In this study, a high-density genetic map was constructed from a 148 BC4F3 population cross between ‘M03’ and ‘M08’ strains based on specific-locus amplified fragment (SLAF) sequencing. The constructed high-density genetic linkage map (HDGM) included 3876 SNP markers on ten chromosomes covering 2413.25 cM in length, with a mean distance between markers of 0.62 cM. QTL analysis was performed on four sweet corn germination traits that are related to seed vigor under artificial aging conditions. A total of 18 QTLs were identified in two seasons. Interestingly, a stable QTL was detected in two seasons on chromosome 10—termed qGR10—within an interval of 1.37 Mb. Within this interval, combined with gene annotation, we found four candidate genes (GRMZM2G074309, GRMZM2G117319, GRMZM2G465812, and GRMZM2G343519) which may be related to seed vigor after artificial aging.
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Affiliation(s)
- Xiaming Wu
- The Key Laboratory of Plant Molecular Breeding of Guangdong Province, College of Agriculture, South China Agricultural University, Guangzhou 510642, China; (X.W.); (F.F.); (Y.Z.); (F.X.); (J.G.); (Y.L.); (W.Z.); (T.G.); (D.C.); (X.L.)
| | - Faqiang Feng
- The Key Laboratory of Plant Molecular Breeding of Guangdong Province, College of Agriculture, South China Agricultural University, Guangzhou 510642, China; (X.W.); (F.F.); (Y.Z.); (F.X.); (J.G.); (Y.L.); (W.Z.); (T.G.); (D.C.); (X.L.)
| | - Yuzhong Zhu
- The Key Laboratory of Plant Molecular Breeding of Guangdong Province, College of Agriculture, South China Agricultural University, Guangzhou 510642, China; (X.W.); (F.F.); (Y.Z.); (F.X.); (J.G.); (Y.L.); (W.Z.); (T.G.); (D.C.); (X.L.)
| | - Fugui Xie
- The Key Laboratory of Plant Molecular Breeding of Guangdong Province, College of Agriculture, South China Agricultural University, Guangzhou 510642, China; (X.W.); (F.F.); (Y.Z.); (F.X.); (J.G.); (Y.L.); (W.Z.); (T.G.); (D.C.); (X.L.)
| | - Jing Yang
- National Engineering Research Center of Plant Space Breeding, South China Agricultural University, Guangzhou 510642, China;
| | - Jie Gong
- The Key Laboratory of Plant Molecular Breeding of Guangdong Province, College of Agriculture, South China Agricultural University, Guangzhou 510642, China; (X.W.); (F.F.); (Y.Z.); (F.X.); (J.G.); (Y.L.); (W.Z.); (T.G.); (D.C.); (X.L.)
| | - Yu Liu
- The Key Laboratory of Plant Molecular Breeding of Guangdong Province, College of Agriculture, South China Agricultural University, Guangzhou 510642, China; (X.W.); (F.F.); (Y.Z.); (F.X.); (J.G.); (Y.L.); (W.Z.); (T.G.); (D.C.); (X.L.)
| | - Wei Zhu
- The Key Laboratory of Plant Molecular Breeding of Guangdong Province, College of Agriculture, South China Agricultural University, Guangzhou 510642, China; (X.W.); (F.F.); (Y.Z.); (F.X.); (J.G.); (Y.L.); (W.Z.); (T.G.); (D.C.); (X.L.)
| | - Tianle Gao
- The Key Laboratory of Plant Molecular Breeding of Guangdong Province, College of Agriculture, South China Agricultural University, Guangzhou 510642, China; (X.W.); (F.F.); (Y.Z.); (F.X.); (J.G.); (Y.L.); (W.Z.); (T.G.); (D.C.); (X.L.)
| | - Danyi Chen
- The Key Laboratory of Plant Molecular Breeding of Guangdong Province, College of Agriculture, South China Agricultural University, Guangzhou 510642, China; (X.W.); (F.F.); (Y.Z.); (F.X.); (J.G.); (Y.L.); (W.Z.); (T.G.); (D.C.); (X.L.)
| | - Xiaoqin Li
- The Key Laboratory of Plant Molecular Breeding of Guangdong Province, College of Agriculture, South China Agricultural University, Guangzhou 510642, China; (X.W.); (F.F.); (Y.Z.); (F.X.); (J.G.); (Y.L.); (W.Z.); (T.G.); (D.C.); (X.L.)
| | - Jun Huang
- The Key Laboratory of Plant Molecular Breeding of Guangdong Province, College of Agriculture, South China Agricultural University, Guangzhou 510642, China; (X.W.); (F.F.); (Y.Z.); (F.X.); (J.G.); (Y.L.); (W.Z.); (T.G.); (D.C.); (X.L.)
- Correspondence: ; Tel.: +86-020-85288311
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Podar D, Macalik K, Réti KO, Martonos I, Török E, Carpa R, Weindorf DC, Csiszár J, Székely G. Morphological, physiological and biochemical aspects of salt tolerance of halophyte Petrosimonia triandra grown in natural habitat. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2019; 25:1335-1347. [PMID: 31736538 PMCID: PMC6825091 DOI: 10.1007/s12298-019-00697-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2019] [Revised: 07/03/2019] [Accepted: 07/30/2019] [Indexed: 06/10/2023]
Abstract
Salt tolerance mechanisms of halophyte Petrosimonia triandra, growing in its natural habitat in Cluj County, Romania, were investigated via biomass, growth parameters, water status, ion content, photosynthetic and antioxidative system efficiency, proline accumulation and lipid degradation. Two sampling sites with different soil electrical conductivities were selected: site 1: 3.14 dS m-1 and site 2: 4.45 dS m-1. Higher salinity proved to have a positive effect on growth. The relative water content did not decline severely, Na+ and K+ content of the roots, stem and leaves was more, and the functions of the photosynthetic apparatus and photosynthetic pigment contents were not altered. The efficiency of the antioxidative defence system was found to be assured by coordination of several reactive oxygen species scavengers. The presence of higher salinity led to accumulation of the osmolyte proline, while degradation of membrane lipids was reduced. As a whole, P. triandra evolved different adaptational strategies to counteract soil salinity, including morphological and physiological adaptations, preservation of photosynthetic activity, development of an efficient antioxidative system and accumulation of the osmotic compound, proline.
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Affiliation(s)
- Dorina Podar
- Department of Molecular Biology and Biotechnology, Faculty of Biology and Geology, Babeş-Bolyai University, 1 Kogălniceanu St., 400084 Cluj-Napoca, Romania
- Centre of Systemic Biology, Biodiversity and Bioresources, Babeş-Bolyai University, 5-7 Clinicilor St., Cluj-Napoca, Romania
| | - Kunigunda Macalik
- Hungarian Department of Biology and Ecology, Faculty of Biology and Geology, Babeş-Bolyai University, 5-7 Clinicilor St., 400006 Cluj-Napoca, Romania
| | - Kinga-Olga Réti
- Faculty of Environmental Science and Engineering, Babeş-Bolyai University, 30 Fântânele St., 400294 Cluj-Napoca, Romania
| | - Ildikó Martonos
- Faculty of Environmental Science and Engineering, Babeş-Bolyai University, 30 Fântânele St., 400294 Cluj-Napoca, Romania
| | - Edina Török
- MTA ÖK Lendület Landscape and Conservation Ecology Research Group, MTA Centre for Ecological Research, 2-4 Alkotmány St., Vácrátót, 2163 Hungary
| | - Rahela Carpa
- Department of Molecular Biology and Biotechnology, Faculty of Biology and Geology, Babeş-Bolyai University, 1 Kogălniceanu St., 400084 Cluj-Napoca, Romania
| | - David C. Weindorf
- Department of Plant and Soil Science, Texas Tech University, Lubbock, TX USA
| | - Jolán Csiszár
- Department of Plant Biology, Faculty of Science and Informatics, University of Szeged, 52 Közép fasor St., Szeged, 6726 Hungary
| | - Gyöngyi Székely
- Hungarian Department of Biology and Ecology, Faculty of Biology and Geology, Babeş-Bolyai University, 5-7 Clinicilor St., 400006 Cluj-Napoca, Romania
- Centre of Systemic Biology, Biodiversity and Bioresources, Babeş-Bolyai University, 5-7 Clinicilor St., Cluj-Napoca, Romania
- Institute for Research-Development-Innovation in Applied Natural Sciences, Babeş-Bolyai University, 30 Fântânele St., 400294 Cluj-Napoca, Romania
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Integration of Transcriptomics and Metabolomics for Pepper ( Capsicum annuum L.) in Response to Heat Stress. Int J Mol Sci 2019; 20:ijms20205042. [PMID: 31614571 PMCID: PMC6829368 DOI: 10.3390/ijms20205042] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2019] [Revised: 10/04/2019] [Accepted: 10/10/2019] [Indexed: 01/26/2023] Open
Abstract
Heat stress (HS), caused by extremely high temperatures, is one of the most severe forms of abiotic stress in pepper. In the present study, we studied the transcriptome and metabolome of a heat-tolerant cultivar (17CL30) and a heat-sensitive cultivar (05S180) under HS. Briefly, we identified 5754 and 5756 differentially expressed genes (DEGs) in 17CL30 and 05S180, respectively. Moreover, we also identified 94 and 108 differentially accumulated metabolites (DAMs) in 17CL30 and 05S180, respectively. Interestingly, there were many common HS-responsive genes (approximately 30%) in both pepper cultivars, despite the expression patterns of these HS-responsive genes being different in both cultivars. Notably, the expression changes of the most common HS-responsive genes were typically much more significant in 17CL30, which might explain why 17CL30 was more heat tolerant. Similar results were also obtained from metabolome data, especially amino acids, organic acids, flavonoids, and sugars. The changes in numerous genes and metabolites emphasized the complex response mechanisms involved in HS in pepper. Collectively, our study suggested that the glutathione metabolic pathway played a critical role in pepper response to HS and the higher accumulation ability of related genes and metabolites might be one of the primary reasons contributing to the heat resistance.
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Martin SL, Parent JS, Laforest M, Page E, Kreiner JM, James T. Population Genomic Approaches for Weed Science. PLANTS (BASEL, SWITZERLAND) 2019; 8:E354. [PMID: 31546893 PMCID: PMC6783936 DOI: 10.3390/plants8090354] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/16/2019] [Revised: 09/12/2019] [Accepted: 09/14/2019] [Indexed: 12/16/2022]
Abstract
Genomic approaches are opening avenues for understanding all aspects of biological life, especially as they begin to be applied to multiple individuals and populations. However, these approaches typically depend on the availability of a sequenced genome for the species of interest. While the number of genomes being sequenced is exploding, one group that has lagged behind are weeds. Although the power of genomic approaches for weed science has been recognized, what is needed to implement these approaches is unfamiliar to many weed scientists. In this review we attempt to address this problem by providing a primer on genome sequencing and provide examples of how genomics can help answer key questions in weed science such as: (1) Where do agricultural weeds come from; (2) what genes underlie herbicide resistance; and, more speculatively, (3) can we alter weed populations to make them easier to control? This review is intended as an introduction to orient weed scientists who are thinking about initiating genome sequencing projects to better understand weed populations, to highlight recent publications that illustrate the potential for these methods, and to provide direction to key tools and literature that will facilitate the development and execution of weed genomic projects.
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Affiliation(s)
- Sara L Martin
- Ottawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada.
| | - Jean-Sebastien Parent
- Ottawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada.
| | - Martin Laforest
- Saint-Jean-sur-Richelieu Research and Development Centre, Agriculture and Agri-Food Canada, Saint-Jean-sur-Richelieu, QC J3B 3E6, Canada.
| | - Eric Page
- Harrow Research and Development Centre, Agriculture and Agri-Food Canada, Harrow, ON N0R 1G0, Canada.
| | - Julia M Kreiner
- Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON M5S 3B2, Canada.
| | - Tracey James
- Ottawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada.
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Du B, Zhao W, An Y, Li Y, Zhang X, Song L, Guo C. Overexpression of an alfalfa glutathione S-transferase gene improved the saline-alkali tolerance of transgenic tobacco. Biol Open 2019; 8:bio.043505. [PMID: 31471294 PMCID: PMC6777358 DOI: 10.1242/bio.043505] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Abstract
Abiotic stresses restrict the productivity and quality of agricultural crops. Glutathione S-transferase (GST) utilizes glutathione to scavenge reactive oxygen species (ROS) that result from abiotic stresses. This study aimed to determine the expression pattern of the MsGSTU8 gene and its effects on saline-alkali tolerance. MsGSTU8, from alfalfa (Medicago sativa 'Zhaodong'), was transformed into transgenic tobacco (Nicotiana tabacum) and overexpressed to determine its effects on saline-alkali tolerance. The gene products in alfalfa localized to the cytoplasm and the transcript levels were higher in the leaves than the roots and stems. Expression was strongly induced by cold, drought, salt and saline-alkali stresses as well as abscisic acid (ABA) treatments. The transgenic tobacco lines had significantly higher transcription levels of the abiotic stress-related genes and higher GST activity than the wild types. Transgenic tobacco lines with saline-alkali treatments maintained their chlorophyll content, showed improved antioxidant enzyme activity and soluble sugar levels, reduced ion leakage, O2 .-, H2O2 accumulation and malondialdehyde content. Our results indicate that overexpression of MsGSTU8 could improve resistance to saline-alkali stresses by decreasing the accumulation of ROS and increasing the levels of antioxidant enzymes. Furthermore, they suggest that MsGSTU8 could be utilized for transgenic crop plant breeding.
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Affiliation(s)
- Binghao Du
- Key Laboratory of Molecular and Cytogenetics, College of Life Science and Technology, Harbin Normal University, Harbin 150025, Heilongjiang Province, China
| | - Weidi Zhao
- Key Laboratory of Molecular and Cytogenetics, College of Life Science and Technology, Harbin Normal University, Harbin 150025, Heilongjiang Province, China
| | - Yimin An
- Key Laboratory of Molecular and Cytogenetics, College of Life Science and Technology, Harbin Normal University, Harbin 150025, Heilongjiang Province, China
| | - Yakun Li
- Key Laboratory of Molecular and Cytogenetics, College of Life Science and Technology, Harbin Normal University, Harbin 150025, Heilongjiang Province, China
| | - Xue Zhang
- Key Laboratory of Molecular and Cytogenetics, College of Life Science and Technology, Harbin Normal University, Harbin 150025, Heilongjiang Province, China
| | - Lili Song
- Key Laboratory of Molecular and Cytogenetics, College of Life Science and Technology, Harbin Normal University, Harbin 150025, Heilongjiang Province, China
| | - Changhong Guo
- Key Laboratory of Molecular and Cytogenetics, College of Life Science and Technology, Harbin Normal University, Harbin 150025, Heilongjiang Province, China
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Li ZK, Chen B, Li XX, Wang JP, Zhang Y, Wang XF, Yan YY, Ke HF, Yang J, Wu JH, Wang GN, Zhang GY, Wu LQ, Wang XY, Ma ZY. A newly identified cluster of glutathione S-transferase genes provides Verticillium wilt resistance in cotton. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2019; 98:213-227. [PMID: 30561788 DOI: 10.1111/tpj.14206] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2018] [Revised: 11/28/2018] [Accepted: 11/30/2018] [Indexed: 05/08/2023]
Abstract
As the largest cultivated fiber crop in the world, cotton (Gossypium hirsutum) is often exposed to various biotic stresses during its growth periods. Verticillium wilt caused by Verticillium dahliae is a severe disease in cotton, and the molecular mechanism of cotton resistance for Verticillium wilt needs to be further investigated. Here, we revealed that the cotton genome contains nine types of GST genes. An evolutionary analysis showed that a newly identified cluster (including Gh_A09G1508, Gh_A09G1509 and Gh_A09G1510) located on chromosome 09 of the A-subgenome was under positive selection pressure during the formation of an allotetraploid. Transcriptome analysis showed that this cluster participates in Verticillium wilt resistance. Because the Gh_A09G1509 gene showed the greatest differential expression in the resistant cultivar under V. dahliae stress, we overexpressed this gene in tobacco and found that its overexpression resulted in enhanced Verticillium wilt resistance. Suppression of the gene cluster via virus-induced gene silencing made cotton plants of the resistant cultivar Nongda601 significantly susceptible. These results demonstrated that the GST cluster played an important role in Verticillium wilt resistance. Further investigation showed that the encoded enzymes of the cluster were essential for the delicate equilibrium between the production and scavenging of H2 O2 during V. dahliae stress.
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Affiliation(s)
- Zhi-Kun Li
- North China Key Laboratory for Germplasm Resources of Education Ministry, Co-Innovation Center for Cotton Industry of Hebei Province, Hebei Agricultural University, Baoding, 071001, China
| | - Bin Chen
- North China Key Laboratory for Germplasm Resources of Education Ministry, Co-Innovation Center for Cotton Industry of Hebei Province, Hebei Agricultural University, Baoding, 071001, China
| | - Xiu-Xin Li
- North China Key Laboratory for Germplasm Resources of Education Ministry, Co-Innovation Center for Cotton Industry of Hebei Province, Hebei Agricultural University, Baoding, 071001, China
| | - Jin-Peng Wang
- School of Life Sciences, North China University of Science and Technology, Tangshan, 063210, China
| | - Yan Zhang
- North China Key Laboratory for Germplasm Resources of Education Ministry, Co-Innovation Center for Cotton Industry of Hebei Province, Hebei Agricultural University, Baoding, 071001, China
| | - Xing-Fen Wang
- North China Key Laboratory for Germplasm Resources of Education Ministry, Co-Innovation Center for Cotton Industry of Hebei Province, Hebei Agricultural University, Baoding, 071001, China
| | - Yuan-Yuan Yan
- North China Key Laboratory for Germplasm Resources of Education Ministry, Co-Innovation Center for Cotton Industry of Hebei Province, Hebei Agricultural University, Baoding, 071001, China
| | - Hui-Feng Ke
- North China Key Laboratory for Germplasm Resources of Education Ministry, Co-Innovation Center for Cotton Industry of Hebei Province, Hebei Agricultural University, Baoding, 071001, China
| | - Jun Yang
- North China Key Laboratory for Germplasm Resources of Education Ministry, Co-Innovation Center for Cotton Industry of Hebei Province, Hebei Agricultural University, Baoding, 071001, China
| | - Jin-Hua Wu
- North China Key Laboratory for Germplasm Resources of Education Ministry, Co-Innovation Center for Cotton Industry of Hebei Province, Hebei Agricultural University, Baoding, 071001, China
| | - Guo-Ning Wang
- North China Key Laboratory for Germplasm Resources of Education Ministry, Co-Innovation Center for Cotton Industry of Hebei Province, Hebei Agricultural University, Baoding, 071001, China
| | - Gui-Yin Zhang
- North China Key Laboratory for Germplasm Resources of Education Ministry, Co-Innovation Center for Cotton Industry of Hebei Province, Hebei Agricultural University, Baoding, 071001, China
| | - Li-Qiang Wu
- North China Key Laboratory for Germplasm Resources of Education Ministry, Co-Innovation Center for Cotton Industry of Hebei Province, Hebei Agricultural University, Baoding, 071001, China
| | - Xi-Yin Wang
- School of Life Sciences, North China University of Science and Technology, Tangshan, 063210, China
| | - Zhi-Ying Ma
- North China Key Laboratory for Germplasm Resources of Education Ministry, Co-Innovation Center for Cotton Industry of Hebei Province, Hebei Agricultural University, Baoding, 071001, China
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Caverzan A, Piasecki C, Chavarria G, Stewart CN, Vargas L. Defenses Against ROS in Crops and Weeds: The Effects of Interference and Herbicides. Int J Mol Sci 2019; 20:ijms20051086. [PMID: 30832379 PMCID: PMC6429093 DOI: 10.3390/ijms20051086] [Citation(s) in RCA: 50] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2019] [Accepted: 02/25/2019] [Indexed: 01/20/2023] Open
Abstract
The antioxidant defense system acts to maintain the equilibrium between the production of reactive oxygen species (ROS) and the elimination of toxic levels of ROS in plants. Overproduction and accumulation of ROS results in metabolic disorders and can lead to the oxidative destruction of the cell. Several stress factors cause ROS overproduction and trigger oxidative stress in crops and weeds. Recently, the involvement of the antioxidant system in weed interference and herbicide treatment in crops and weeds has been the subject of investigation. In this review, we address ROS production and plant mechanisms of defense, alterations in the antioxidant system at transcriptional and enzymatic levels in crops induced by weed interference, and herbicide exposure in crops and weeds. We also describe the mechanisms of action in herbicides that lead to ROS generation in target plants. Lastly, we discuss the relations between antioxidant systems and weed biology and evolution, as well as the interactive effects of herbicide treatment on these factors.
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Affiliation(s)
- Andréia Caverzan
- Faculty of Agronomy and Veterinary Medicine, Agronomy Post-Graduate Program, University of Passo Fundo (UPF), Passo Fundo 99052-900, Brazil.
| | - Cristiano Piasecki
- Department of Crop Protection, Federal University of Pelotas, Pelotas 96160-000, Brazil.
| | - Geraldo Chavarria
- Faculty of Agronomy and Veterinary Medicine, Agronomy Post-Graduate Program, University of Passo Fundo (UPF), Passo Fundo 99052-900, Brazil.
| | - C Neal Stewart
- Department of Plant Sciences, University of Tennessee, Knoxville, TN 37996-4561, USA.
| | - Leandro Vargas
- Department of Weed Science, Brazilian Agricultural Research Corporation (EMBRAPA), Passo Fundo 99050-970, Brazil.
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Iwakami S, Kamidate Y, Yamaguchi T, Ishizaka M, Endo M, Suda H, Nagai K, Sunohara Y, Toki S, Uchino A, Tominaga T, Matsumoto H. CYP81A P450s are involved in concomitant cross-resistance to acetolactate synthase and acetyl-CoA carboxylase herbicides in Echinochloa phyllopogon. THE NEW PHYTOLOGIST 2019; 221:2112-2122. [PMID: 30347444 DOI: 10.1111/nph.15552] [Citation(s) in RCA: 69] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/14/2018] [Accepted: 10/14/2018] [Indexed: 05/13/2023]
Abstract
Californian populations of Echinochloa phyllopogon have evolved multiple-herbicide resistance (MHR), posing a threat to rice production in California. Previously, we identified two CYP81A cytochrome P450 genes whose overexpression is associated with resistance to acetolactate synthase (ALS) inhibitors from two chemical groups. Resistance mechanisms to other herbicides remain unknown. We analyzed the sensitivity of an MHR line to acetyl-CoA carboxylase (ACCase) inhibitors from three chemical groups, followed by an analysis of herbicide metabolism and segregation of resistance of the progenies in sensitive (S) and MHR lines. ACCase herbicide metabolizing function was investigated in the two previously identified P450s. MHR plants exhibited resistance to all the ACCase inhibitors by enhanced herbicide metabolism. Resistance to the ACCase inhibitors segregated in a 3 : 1 ratio in the F2 generation and completely co-segregated with ALS inhibitor resistance in F6 lines. Expression of the respective P450 genes conferred resistance to the three herbicides in rice, which is in line with the detection of hydroxylated herbicide metabolites in vivo in transformed yeast. CYP81As are super P450s that metabolize multiple herbicides from five chemical classes, and concurrent overexpression of the P450s induces metabolism-based resistance to the three ACCase inhibitors in MHR E. phyllopogon, as it does to ALS inhibitors.
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Affiliation(s)
- Satoshi Iwakami
- Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto, 606-8502, Japan
| | - Yoshitaka Kamidate
- Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, 305-8572, Japan
| | - Takuya Yamaguchi
- Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, 305-8572, Japan
| | - Masumi Ishizaka
- Advanced Analysis Center, National Agriculture and Food Research Organization, Tsukuba, 305-8602, Japan
| | - Masaki Endo
- Plant Genome Engineering Research Unit, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, Tsukuba, 305-8634, Japan
| | - Hiroe Suda
- Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto, 606-8502, Japan
| | - Kiichi Nagai
- Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, 305-8572, Japan
| | - Yukari Sunohara
- Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, 305-8572, Japan
| | - Seiichi Toki
- Plant Genome Engineering Research Unit, Institute of Agrobiological Sciences, National Agriculture and Food Research Organization, Tsukuba, 305-8634, Japan
- Graduate School of Nanobioscience, Yokohama City University, Yokohama, 236-0027, Japan
- Kihara Institute for Biological Research, Yokohama City University, Yokohama, 244-0813, Japan
| | - Akira Uchino
- Central Region Agricultural Research Center, National Agriculture and Food Research Organization, Tsu, 514-2392, Japan
| | - Tohru Tominaga
- Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto, 606-8502, Japan
| | - Hiroshi Matsumoto
- Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, 305-8572, Japan
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49
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Gallé Á, Czékus Z, Bela K, Horváth E, Ördög A, Csiszár J, Poór P. Plant Glutathione Transferases and Light. FRONTIERS IN PLANT SCIENCE 2019; 9:1944. [PMID: 30687349 PMCID: PMC6333738 DOI: 10.3389/fpls.2018.01944] [Citation(s) in RCA: 43] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2018] [Accepted: 12/13/2018] [Indexed: 05/09/2023]
Abstract
The activity and expression of glutathione transferases (GSTs) depend on several less-known endogenous and well-described exogenous factors, such as the developmental stage, presence, and intensity of different stressors, as well as on the absence or presence and quality of light, which to date have received less attention. In this review, we focus on discussing the role of circadian rhythm, light quality, and intensity in the regulation of plant GSTs. Recent studies demonstrate that diurnal regulation can be recognized in GST activity and gene expression in several plant species. In addition, the content of one of their co-substrates, reduced glutathione (GSH), also shows diurnal changes. Darkness, low light or shade mostly reduces GST activity, while high or excess light significantly elevates both the activity and expression of GSTs and GSH levels. Besides the light-regulated induction and dark inactivation of GSTs, these enzymes can also participate in the signal transduction of visible and UV light. For example, red light may alleviate the harmful effects of pathogens and abiotic stressors by increasing GST activity and expression, as well as GSH content in leaves of different plant species. Based on this knowledge, further research on plants (crops and weeds) or organs and temporal regulation of GST activity and gene expression is necessary for understanding the complex regulation of plant GSTs under various light conditions in order to increase the yield and stress tolerance of plants in the changing environment.
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Affiliation(s)
- Ágnes Gallé
- Department of Plant Biology, Faculty of Science and InformaticsUniversity of Szeged, Szeged, Hungary
| | - Zalán Czékus
- Department of Plant Biology, Faculty of Science and InformaticsUniversity of Szeged, Szeged, Hungary
| | - Krisztina Bela
- Department of Plant Biology, Faculty of Science and InformaticsUniversity of Szeged, Szeged, Hungary
| | - Edit Horváth
- Biological Research CentreInstitute of Plant Biology, Szeged, Hungary
| | - Attila Ördög
- Department of Plant Biology, Faculty of Science and InformaticsUniversity of Szeged, Szeged, Hungary
| | - Jolán Csiszár
- Department of Plant Biology, Faculty of Science and InformaticsUniversity of Szeged, Szeged, Hungary
| | - Péter Poór
- Department of Plant Biology, Faculty of Science and InformaticsUniversity of Szeged, Szeged, Hungary
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50
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Garanzini DS, Medici S, Moreyra LD, Menone ML. Acute exposure to a commercial formulation of Azoxystrobin alters antioxidant enzymes and elicit damage in the aquatic macrophyte Myriophyllum quitense. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2019; 25:135-143. [PMID: 30804636 PMCID: PMC6352532 DOI: 10.1007/s12298-018-0603-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2018] [Revised: 08/30/2018] [Accepted: 09/10/2018] [Indexed: 06/09/2023]
Abstract
Azoxystrobin is a strobilurin of growing concern in aquatic environments because it is the most sold fungicide worldwide, however, the information available about its effect on aquatic non-target organisms is scarce. The objective of the present study was to evaluate potential physiological, biochemical, and genetic effects at environmentally relevant (1-10 μg/L) and elevated (100-500 μg/L) concentrations in the aquatic macrophyte Myriophyllum quitense exposed to the commercial formulation AMISTAR®. Following an acute 24-h exposure, there were no effects of AMISTAR® on photosynthetic pigments at any of the concentrations evaluated. Glutathione-S-transferase activity was significantly elevated at 1 and 10 μg/L AZX. Significant decrease of catalase and guaiacol peroxidase activities in plants exposed to 500 μg/L, and to 100 and 500 μg/L, respectively, and an increase in glycolate oxidase activity at 500 μg/L was observed. DNA damage at 100 and 500 μg/L was observed. These data indicate that although environmentally relevant levels of AMISTAR® did not result cytotoxic, this fungicide was genotoxic, affecting the physiological process of photorespiration and caused oxidative damage at high concentrations. In this sense, it is necessary to explore sub-lethal responses in non-target organisms because some effects could promote further potential long-term biological consequences in a context of repeated pulses of exposure.
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Affiliation(s)
- Daniela S. Garanzini
- Lab. Ecotoxicología, Instituto de Investigaciones Marinas y Costeras (IIMyC)-UNMDP/CONICET, Funes 3350, 7600 Mar del Plata, Buenos Aires Argentina
| | - Sandra Medici
- Fares Taie Instituto de Análisis, Magallanes 3019, 7600 Mar del Plata, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Capital Federal, Argentina
| | - Lucía D. Moreyra
- Facultad de Ciencias Exactas y Naturales- UNMDP, Funes 3350, 7600 Mar del Plata, Argentina
| | - Mirta L. Menone
- Lab. Ecotoxicología, Instituto de Investigaciones Marinas y Costeras (IIMyC)-UNMDP/CONICET, Funes 3350, 7600 Mar del Plata, Buenos Aires Argentina
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