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For: Pascale E, Valle E, Furano AV. Amplification of an ancestral mammalian L1 family of long interspersed repeated DNA occurred just before the murine radiation. Proc Natl Acad Sci U S A 1990;87:9481-5. [PMID: 2251288 PMCID: PMC55190 DOI: 10.1073/pnas.87.23.9481] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]  Open
Number Cited by Other Article(s)
1
The retroelement Lx9 puts a brake on the immune response to virus infection. Nature 2022;608:757-765. [PMID: 35948641 DOI: 10.1038/s41586-022-05054-9] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2019] [Accepted: 06/30/2022] [Indexed: 11/08/2022]
2
Almojil D, Bourgeois Y, Falis M, Hariyani I, Wilcox J, Boissinot S. The Structural, Functional and Evolutionary Impact of Transposable Elements in Eukaryotes. Genes (Basel) 2021;12:genes12060918. [PMID: 34203645 PMCID: PMC8232201 DOI: 10.3390/genes12060918] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2021] [Revised: 06/04/2021] [Accepted: 06/07/2021] [Indexed: 12/22/2022]  Open
3
Manthey JD, Moyle RG, Boissinot S. Multiple and Independent Phases of Transposable Element Amplification in the Genomes of Piciformes (Woodpeckers and Allies). Genome Biol Evol 2018;10:1445-1456. [PMID: 29850797 PMCID: PMC6007501 DOI: 10.1093/gbe/evy105] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 05/22/2018] [Indexed: 12/15/2022]  Open
4
Sookdeo A, Ruiz-García M, Schneider H, Boissinot S. Contrasting Rates of LINE-1 Amplification among New World Primates of the Atelidae Family. Cytogenet Genome Res 2018;154:217-228. [PMID: 29991050 DOI: 10.1159/000490481] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/13/2018] [Indexed: 11/19/2022]  Open
5
Xue AT, Ruggiero RP, Hickerson MJ, Boissinot S. Differential Effect of Selection against LINE Retrotransposons among Vertebrates Inferred from Whole-Genome Data and Demographic Modeling. Genome Biol Evol 2018;10:1265-1281. [PMID: 29688421 PMCID: PMC5963298 DOI: 10.1093/gbe/evy083] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 04/20/2018] [Indexed: 12/30/2022]  Open
6
Sookdeo A, Hepp CM, Boissinot S. Contrasted patterns of evolution of the LINE-1 retrotransposon in perissodactyls: the history of a LINE-1 extinction. Mob DNA 2018;9:12. [PMID: 29610583 PMCID: PMC5872511 DOI: 10.1186/s13100-018-0117-4] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2018] [Accepted: 03/22/2018] [Indexed: 12/30/2022]  Open
7
Klinkhamer AJ, Godthelp H. Two new species of fossil Leggadina (Rodentia: Muridae) from Northwestern Queensland. PeerJ 2015. [PMID: 26207193 PMCID: PMC4511818 DOI: 10.7717/peerj.1088] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]  Open
8
LINE-1 retrotransposons: from 'parasite' sequences to functional elements. J Appl Genet 2014;56:133-45. [PMID: 25106509 DOI: 10.1007/s13353-014-0241-x] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2014] [Revised: 07/24/2014] [Accepted: 07/25/2014] [Indexed: 10/24/2022]
9
Wagstaff BJ, Barnerβoi M, Roy-Engel AM. Evolutionary conservation of the functional modularity of primate and murine LINE-1 elements. PLoS One 2011;6:e19672. [PMID: 21572950 PMCID: PMC3091869 DOI: 10.1371/journal.pone.0019672] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2011] [Accepted: 04/03/2011] [Indexed: 11/18/2022]  Open
10
Konkel MK, Walker JA, Batzer MA. LINEs and SINEs of primate evolution. Evol Anthropol 2011;19:236-249. [PMID: 25147443 DOI: 10.1002/evan.20283] [Citation(s) in RCA: 65] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
11
Lachapelle MY, Drouin G. Inactivation dates of the human and guinea pig vitamin C genes. Genetica 2010;139:199-207. [PMID: 21140195 DOI: 10.1007/s10709-010-9537-x] [Citation(s) in RCA: 55] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2010] [Accepted: 11/26/2010] [Indexed: 11/30/2022]
12
Rebollo R, Horard B, Hubert B, Vieira C. Jumping genes and epigenetics: Towards new species. Gene 2010;454:1-7. [DOI: 10.1016/j.gene.2010.01.003] [Citation(s) in RCA: 97] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2009] [Revised: 01/06/2010] [Accepted: 01/19/2010] [Indexed: 01/13/2023]
13
Marchal JA, Acosta MJ, Bullejos M, de la Guardia RD, Sánchez A. Origin and spread of the SRY gene on the X and Y chromosomes of the rodent Microtus cabrerae: Role of L1 elements. Genomics 2008;91:142-51. [DOI: 10.1016/j.ygeno.2007.10.010] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2007] [Revised: 10/15/2007] [Accepted: 10/19/2007] [Indexed: 11/30/2022]
14
Scott LA, Kuroiwa A, Matsuda Y, Wichman HA. X accumulation of LINE-1 retrotransposons in Tokudaia osimensis, a spiny rat with the karyotype XO. Cytogenet Genome Res 2006;112:261-9. [PMID: 16484782 DOI: 10.1159/000089880] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2005] [Accepted: 07/25/2005] [Indexed: 01/02/2023]  Open
15
Khan H, Smit A, Boissinot S. Molecular evolution and tempo of amplification of human LINE-1 retrotransposons since the origin of primates. Genome Res 2005;16:78-87. [PMID: 16344559 PMCID: PMC1356131 DOI: 10.1101/gr.4001406] [Citation(s) in RCA: 266] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
16
Dobigny G, Ozouf-Costaz C, Waters PD, Bonillo C, Coutanceau JP, Volobouev V. LINE-1 amplification accompanies explosive genome repatterning in rodents. Chromosome Res 2004;12:787-93. [PMID: 15702417 DOI: 10.1007/s10577-005-5265-y] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2004] [Accepted: 09/15/2004] [Indexed: 11/24/2022]
17
Waters PD, Dobigny G, Pardini AT, Robinson TJ. LINE-1 distribution in Afrotheria and Xenarthra: implications for understanding the evolution of LINE-1 in eutherian genomes. Chromosoma 2004;113:137-44. [PMID: 15338236 DOI: 10.1007/s00412-004-0301-9] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2004] [Revised: 06/04/2004] [Accepted: 06/11/2004] [Indexed: 10/26/2022]
18
Breed WG. The spermatozoon of Eurasian murine rodents: Its morphological diversity and evolution. J Morphol 2004;261:52-69. [PMID: 15164367 DOI: 10.1002/jmor.10228] [Citation(s) in RCA: 55] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
19
Boissinot S, Furano AV. Adaptive evolution in LINE-1 retrotransposons. Mol Biol Evol 2001;18:2186-94. [PMID: 11719568 DOI: 10.1093/oxfordjournals.molbev.a003765] [Citation(s) in RCA: 82] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]  Open
20
Pötter T, Wedemeyer N, van Dülmen A, Köhnlein W, Göhde W. Identification of a deletion hotspot on distal mouse chromosome 4 by YAC fingerprinting. Mutat Res 2001;476:29-42. [PMID: 11336981 DOI: 10.1016/s0027-5107(01)00062-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
21
Michaux J, Catzeflis F. The bushlike radiation of muroid rodents is exemplified by the molecular phylogeny of the LCAT nuclear gene. Mol Phylogenet Evol 2000;17:280-93. [PMID: 11083941 DOI: 10.1006/mpev.2000.0849] [Citation(s) in RCA: 54] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
22
Casavant NC, Scott L, Cantrell MA, Wiggins LE, Baker RJ, Wichman HA. The end of the LINE?: lack of recent L1 activity in a group of South American rodents. Genetics 2000;154:1809-17. [PMID: 10747071 PMCID: PMC1461046 DOI: 10.1093/genetics/154.4.1809] [Citation(s) in RCA: 59] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]  Open
23
Dubois JY, Catzeflis FM, Beintema JJ. The phylogenetic position of "Acomyinae" (Rodentia, Mammalia) as sister group of a Murinae + Gerbillinae clade: evidence from the nuclear ribonuclease gene. Mol Phylogenet Evol 1999;13:181-92. [PMID: 10508551 DOI: 10.1006/mpev.1999.0674] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
24
Obatake M, Kushida M, Kimmel S, Clarke ID, Kim PC. T cells are necessary and critical for xenograft rejection in new concordant cardiac xenotransplant model. Transplantation 1999;67:1480-4. [PMID: 10385090 DOI: 10.1097/00007890-199906150-00016] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
25
Casavant NC, Lee RN, Sherman AN, Wichman HA. Molecular evolution of two lineages of L1 (LINE-1) retrotransposons in the california mouse, Peromyscus californicus. Genetics 1998;150:345-57. [PMID: 9725851 PMCID: PMC1460335 DOI: 10.1093/genetics/150.1.345] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
26
Verneau O, Catzeflis F, Furano AV. Determination of the evolutionary relationships in Rattus sensu lato (Rodentia : Muridae) using L1 (LINE-1) amplification events. J Mol Evol 1997;45:424-36. [PMID: 9321421 DOI: 10.1007/pl00006247] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
27
Cabot EL, Angeletti B, Usdin K, Furano AV. Rapid evolution of a young L1 (LINE-1) clade in recently speciated Rattus taxa. J Mol Evol 1997;45:412-23. [PMID: 9321420 DOI: 10.1007/pl00006246] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
28
Hayward BE, Zavanelli M, Furano AV. Recombination creates novel L1 (LINE-1) elements in Rattus norvegicus. Genetics 1997;146:641-54. [PMID: 9178013 PMCID: PMC1208004 DOI: 10.1093/genetics/146.2.641] [Citation(s) in RCA: 42] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]  Open
29
Breed WG. Spermatozoa of murid rodents from Africa: morphological diversity and evolutionary trends. J Zool (1987) 1995. [DOI: 10.1111/j.1469-7998.1995.tb05019.x] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
30
Furano AV, Usdin K. DNA "fossils" and phylogenetic analysis. Using L1 (LINE-1, long interspersed repeated) DNA to determine the evolutionary history of mammals. J Biol Chem 1995;270:25301-4. [PMID: 7592685 DOI: 10.1074/jbc.270.43.25301] [Citation(s) in RCA: 44] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]  Open
31
Furano AV, Hayward BE, Chevret P, Catzeflis F, Usdin K. Amplification of the ancient murine Lx family of long interspersed repeated DNA occurred during the murine radiation. J Mol Evol 1994;38:18-27. [PMID: 8151711 DOI: 10.1007/bf00175491] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
32
Smit AF. Identification of a new, abundant superfamily of mammalian LTR-transposons. Nucleic Acids Res 1993;21:1863-72. [PMID: 8388099 PMCID: PMC309426 DOI: 10.1093/nar/21.8.1863] [Citation(s) in RCA: 174] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]  Open
33
Chevret P, Denys C, Jaeger JJ, Michaux J, Catzeflis FM. Molecular evidence that the spiny mouse (Acomys) is more closely related to gerbils (Gerbillinae) than to true mice (Murinae). Proc Natl Acad Sci U S A 1993;90:3433-6. [PMID: 8475093 PMCID: PMC46314 DOI: 10.1073/pnas.90.8.3433] [Citation(s) in RCA: 69] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]  Open
34
Pascale E, Liu C, Valle E, Usdin K, Furano AV. The evolution of long interspersed repeated DNA (L1, LINE 1) as revealed by the analysis of an ancient rodent L1 DNA family. J Mol Evol 1993;36:9-20. [PMID: 8433380 DOI: 10.1007/bf02407302] [Citation(s) in RCA: 53] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
35
Kass DH, Berger FG, Dawson WD. The evolution of coexisting highly divergent LINE-1 subfamilies within the rodent genus Peromyscus. J Mol Evol 1992;35:472-85. [PMID: 1474601 DOI: 10.1007/bf00160208] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
36
Gum J, Hicks J, Lagace R, Byrd J, Toribara N, Siddiki B, Fearney F, Lamport D, Kim Y. Molecular cloning of rat intestinal mucin. Lack of conservation between mammalian species. J Biol Chem 1991. [DOI: 10.1016/s0021-9258(18)54629-9] [Citation(s) in RCA: 27] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]  Open
37
Schwartz S, Miller W, Yang CM, Hardison RC. Software tools for analyzing pairwise alignments of long sequences. Nucleic Acids Res 1991;19:4663-7. [PMID: 1891357 PMCID: PMC328706 DOI: 10.1093/nar/19.17.4663] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]  Open
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