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For: Matyunina LV, Jordan IK, McDonald JF. Naturally occurring variation in copia expression is due to both element (cis) and host (trans) regulatory variation. Proc Natl Acad Sci U S A 1996;93:7097-102. [PMID: 8692951 PMCID: PMC38942 DOI: 10.1073/pnas.93.14.7097] [Citation(s) in RCA: 27] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]  Open
Number Cited by Other Article(s)
1
Kiparaki M, Khan C, Folgado-Marco V, Chuen J, Moulos P, Baker NE. The transcription factor Xrp1 orchestrates both reduced translation and cell competition upon defective ribosome assembly or function. eLife 2022;11:e71705. [PMID: 35179490 PMCID: PMC8933008 DOI: 10.7554/elife.71705] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2021] [Accepted: 02/09/2022] [Indexed: 11/26/2022]  Open
2
Nefedova LN, Urusov FA, Romanova NI, Shmel’kova AO, Kim AI. Study of the transcriptional and transpositional activities of the Tirant Retrotransposon in Drosophila melanogaster strains mutant for the flamenco locus. RUSS J GENET+ 2012. [DOI: 10.1134/s1022795412110063] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
3
de Setta N, Van Sluys MA, Capy P, Carareto CMA. Copia retrotransposon in the Zaprionus genus: another case of transposable element sharing with the Drosophila melanogaster subgroup. J Mol Evol 2011;72:326-38. [PMID: 21347850 DOI: 10.1007/s00239-011-9435-6] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2010] [Accepted: 02/07/2011] [Indexed: 11/24/2022]
4
Comparative analysis of transposable elements in the melanogaster subgroup sequenced genomes. Gene 2010;473:100-9. [PMID: 21156200 DOI: 10.1016/j.gene.2010.11.009] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2010] [Revised: 11/24/2010] [Accepted: 11/24/2010] [Indexed: 11/22/2022]
5
Deprá M, Valente VLDS, Margis R, Loreto ELS. The hobo transposon and hobo-related elements are expressed as developmental genes in Drosophila. Gene 2009;448:57-63. [PMID: 19720121 DOI: 10.1016/j.gene.2009.08.012] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2009] [Revised: 08/10/2009] [Accepted: 08/22/2009] [Indexed: 02/02/2023]
6
Fablet M, Lerat E, Rebollo R, Horard B, Burlet N, Martinez S, Brasset E, Gilson E, Vaury C, Vieira C. Genomic environment influences the dynamics of the tirant LTR retrotransposon in Drosophila. FASEB J 2009;23:1482-9. [PMID: 19141532 DOI: 10.1096/fj.08-123513] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
7
Infra- and Transspecific Clues to Understanding the Dynamics of Transposable Elements. TRANSPOSONS AND THE DYNAMIC GENOME 2009. [DOI: 10.1007/7050_2009_044] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
8
Matyunina LV, Bowen NJ, McDonald JF. LTR retrotransposons and the evolution of dosage compensation in Drosophila. BMC Mol Biol 2008;9:55. [PMID: 18533037 PMCID: PMC2443393 DOI: 10.1186/1471-2199-9-55] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2008] [Accepted: 06/04/2008] [Indexed: 11/18/2022]  Open
9
Fablet M, Rebollo R, Biémont C, Vieira C. The evolution of retrotransposon regulatory regions and its consequences on the Drosophila melanogaster and Homo sapiens host genomes. Gene 2006;390:84-91. [PMID: 17005332 DOI: 10.1016/j.gene.2006.08.005] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2006] [Revised: 08/11/2006] [Accepted: 08/15/2006] [Indexed: 11/26/2022]
10
Fablet M, McDonald JF, Biémont C, Vieira C. Ongoing loss of the tirant transposable element in natural populations of Drosophila simulans. Gene 2006;375:54-62. [PMID: 16626897 DOI: 10.1016/j.gene.2006.02.008] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2005] [Revised: 01/16/2006] [Accepted: 02/08/2006] [Indexed: 10/24/2022]
11
Shababi M, Bourque J, Palanichelvam K, Cole A, Xu D, Wan XF, Schoelz J. The ribosomal shunt translation strategy of cauliflower mosaic virus has evolved from ancient long terminal repeats. J Virol 2006;80:3811-22. [PMID: 16571798 PMCID: PMC1440423 DOI: 10.1128/jvi.80.8.3811-3822.2006] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2005] [Accepted: 01/25/2006] [Indexed: 12/17/2022]  Open
12
Brookfield JFY. Evolutionary forces generating sequence homogeneity and heterogeneity within retrotransposon families. Cytogenet Genome Res 2005;110:383-91. [PMID: 16093690 DOI: 10.1159/000084970] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2004] [Accepted: 07/09/2004] [Indexed: 11/19/2022]  Open
13
Vicient CM, Kalendar R, Schulman AH. Variability, Recombination, and Mosaic Evolution of the Barley BARE-1 Retrotransposon. J Mol Evol 2005;61:275-91. [PMID: 16034651 DOI: 10.1007/s00239-004-0168-7] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2004] [Accepted: 03/11/2005] [Indexed: 11/27/2022]
14
Mugnier N, Biémont C, Vieira C. New regulatory regions of Drosophila 412 retrotransposable element generated by recombination. Mol Biol Evol 2004;22:747-57. [PMID: 15574808 DOI: 10.1093/molbev/msi060] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
15
Meignin C, Dastugue B, Vaury C. Intercellular communication between germ line and somatic line is utilized to control the transcription of ZAM, an endogenous retrovirus from Drosophila melanogaster. Nucleic Acids Res 2004;32:3799-806. [PMID: 15263061 PMCID: PMC506797 DOI: 10.1093/nar/gkh708] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]  Open
16
Gray CE, Coates CJ. High-level gene expression in Aedes albopictus cells using a baculovirus Hr3 enhancer and IE1 transactivator. BMC Mol Biol 2004;5:8. [PMID: 15251037 PMCID: PMC487899 DOI: 10.1186/1471-2199-5-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2004] [Accepted: 07/13/2004] [Indexed: 11/10/2022]  Open
17
Meignin C, Bailly JL, Arnaud F, Dastugue B, Vaury C. The 5' untranslated region and Gag product of Idefix, a long terminal repeat-retrotransposon from Drosophila melanogaster, act together to initiate a switch between translated and untranslated states of the genomic mRNA. Mol Cell Biol 2003;23:8246-54. [PMID: 14585982 PMCID: PMC262410 DOI: 10.1128/mcb.23.22.8246-8254.2003] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
18
von Sternberg R. On the roles of repetitive DNA elements in the context of a unified genomic-epigenetic system. Ann N Y Acad Sci 2002;981:154-88. [PMID: 12547679 DOI: 10.1111/j.1749-6632.2002.tb04917.x] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
19
Borie N, Maisonhaute C, Sarrazin S, Loevenbruck C, Biémont C. Tissue-specificity of 412 retrotransposon expression in Drosophila simulans and D. melanogaster. Heredity (Edinb) 2002;89:247-52. [PMID: 12242639 DOI: 10.1038/sj.hdy.6800135] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2002] [Accepted: 06/20/2002] [Indexed: 11/09/2022]  Open
20
Posey KL, Jones LB, Cerda R, Bajaj M, Huynh T, Hardin PE, Hardin SH. Survey of transcripts in the adult Drosophila brain. Genome Biol 2001;2:RESEARCH0008. [PMID: 11276425 PMCID: PMC30707 DOI: 10.1186/gb-2001-2-3-research0008] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2000] [Revised: 01/22/2001] [Accepted: 01/24/2001] [Indexed: 11/16/2022]  Open
21
Perdue S, Nuzhdin SV. Master copy is not responsible for the high rate of copia transposition in Drosophila. Mol Biol Evol 2000;17:984-6. [PMID: 10833206 DOI: 10.1093/oxfordjournals.molbev.a026380] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
22
Jordan IK, Matyunina LV, McDonald JF. Evidence for the recent horizontal transfer of long terminal repeat retrotransposon. Proc Natl Acad Sci U S A 1999;96:12621-5. [PMID: 10535972 PMCID: PMC23018 DOI: 10.1073/pnas.96.22.12621] [Citation(s) in RCA: 95] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
23
Wilson S, Matyunina LV, McDonald JF. An enhancer region within the copia untranslated leader contains binding sites for Drosophila regulatory proteins. Gene 1998;209:239-46. [PMID: 9524274 DOI: 10.1016/s0378-1119(98)00048-1] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
24
Takeda S, Sugimoto K, Otsuki H, Hirochika H. Transcriptional activation of the tobacco retrotransposon Tto1 by wounding and methyl jasmonate. PLANT MOLECULAR BIOLOGY 1998;36:365-76. [PMID: 9484477 DOI: 10.1023/a:1005911413528] [Citation(s) in RCA: 59] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
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