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For: Gan RR, Yi EC, Chiu Y, Lee H, Kao YCP, Wu TH, Aebersold R, Goodlett DR, Ng WV. Proteome Analysis of Halobacterium sp. NRC-1 Facilitated by the Biomodule Analysis Tool BMSorter. Mol Cell Proteomics 2006;5:987-97. [PMID: 16497792 DOI: 10.1074/mcp.m500367-mcp200] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
Number Cited by Other Article(s)
1
Reshma SV, Sathyanarayanan N, Nagendra HG. Characterization of hypothetical protein VNG0128C from Halobacterium NRC-1 reveals GALE like activity and its involvement in Leloir pathway of galactose metabolism. J Biomol Struct Dyn 2014;33:1743-55. [PMID: 25397923 DOI: 10.1080/07391102.2014.969313] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
2
Madsen JA, Xu H, Robinson MR, Horton AP, Shaw JB, Giles DK, Kaoud TS, Dalby KN, Trent MS, Brodbelt JS. High-throughput database search and large-scale negative polarity liquid chromatography-tandem mass spectrometry with ultraviolet photodissociation for complex proteomic samples. Mol Cell Proteomics 2013;12:2604-14. [PMID: 23695934 DOI: 10.1074/mcp.o113.028258] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
3
Liao WC, Ng WV, Lin IH, Syu WJ, Liu TT, Chang CH. T4-Like genome organization of the Escherichia coli O157:H7 lytic phage AR1. J Virol 2011;85:6567-78. [PMID: 21507986 PMCID: PMC3126482 DOI: 10.1128/jvi.02378-10] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2010] [Accepted: 04/04/2011] [Indexed: 11/20/2022]  Open
4
Chu LJ, Yang H, Shih P, Kao Y, Tsai YS, Chen J, Huang G, Weng RR, Ting YS, Fang X, von Haller PD, Goodlett DR, Ng WV. Metabolic capabilities and systems fluctuations in Haloarcula marismortui revealed by integrative genomics and proteomics analyses. J Proteome Res 2011;10:3261-73. [PMID: 21598921 PMCID: PMC3168985 DOI: 10.1021/pr200290x] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
5
Ahrens CH, Brunner E, Qeli E, Basler K, Aebersold R. Generating and navigating proteome maps using mass spectrometry. Nat Rev Mol Cell Biol 2010;11:789-801. [DOI: 10.1038/nrm2973] [Citation(s) in RCA: 120] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
6
Nero D, Krouk G, Tranchina D, Coruzzi GM. A system biology approach highlights a hormonal enhancer effect on regulation of genes in a nitrate responsive "biomodule". BMC SYSTEMS BIOLOGY 2009;3:59. [PMID: 19500399 PMCID: PMC2702358 DOI: 10.1186/1752-0509-3-59] [Citation(s) in RCA: 43] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/26/2009] [Accepted: 06/06/2009] [Indexed: 11/24/2022]
7
Van PT, Schmid AK, King NL, Kaur A, Pan M, Whitehead K, Koide T, Facciotti MT, Goo YA, Deutsch EW, Reiss DJ, Mallick P, Baliga NS. Halobacterium salinarum NRC-1 PeptideAtlas: toward strategies for targeted proteomics and improved proteome coverage. J Proteome Res 2008;7:3755-64. [PMID: 18652504 PMCID: PMC2643335 DOI: 10.1021/pr800031f] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
8
Ng WV, Berquist BR, Coker JA, Capes M, Wu TH, DasSarma P, DasSarma S. Genome sequences of Halobacterium species. Genomics 2008;91:548-52; author reply 553-4. [DOI: 10.1016/j.ygeno.2008.04.005] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2008] [Accepted: 04/21/2008] [Indexed: 10/22/2022]
9
Genomics and functional genomics with haloarchaea. Arch Microbiol 2008;190:197-215. [PMID: 18493745 DOI: 10.1007/s00203-008-0376-4] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2008] [Revised: 04/08/2008] [Accepted: 04/20/2008] [Indexed: 10/22/2022]
10
Zhou P, Wen J, Oren A, Chen M, Wu M. Genomic survey of sequence features for ultraviolet tolerance in haloarchaea (family Halobacteriaceae). Genomics 2007;90:103-9. [PMID: 17498923 DOI: 10.1016/j.ygeno.2007.03.015] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2006] [Revised: 03/10/2007] [Accepted: 03/27/2007] [Indexed: 11/22/2022]
11
DasSarma S, Berquist BR, Coker JA, DasSarma P, Müller JA. Post-genomics of the model haloarchaeon Halobacterium sp. NRC-1. SALINE SYSTEMS 2006;2:3. [PMID: 16542428 PMCID: PMC1447603 DOI: 10.1186/1746-1448-2-3] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/01/2006] [Accepted: 03/16/2006] [Indexed: 11/21/2022]
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