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Zhang S, Chen J, Gao F, Su W, Li T, Wang Y. Foodomics as a Tool for Evaluating Food Authenticity and Safety from Field to Table: A Review. Foods 2024; 14:15. [PMID: 39796305 PMCID: PMC11719641 DOI: 10.3390/foods14010015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2024] [Revised: 12/06/2024] [Accepted: 12/18/2024] [Indexed: 01/13/2025] Open
Abstract
The globalization of the food industry chain and the increasing complexity of the food supply chain present significant challenges for food authenticity and raw material processing. Food authenticity identification now extends beyond mere adulteration recognition to include quality evaluation, label compliance, traceability determination, and other quality-related aspects. Consequently, the development of high-throughput, accurate, and rapid analytical techniques is essential to meet these diversified needs. Foodomics, an innovative technology emerging from advancements in food science, enables both a qualitative judgment and a quantitative analysis of food authenticity and safety. This review also addresses crucial aspects of fully processing food, such as verifying the origin, processing techniques, label authenticity, and detecting adulterants, by summarizing the omics technologies of proteomics, lipidomics, flavoromics, metabolomics, genomics, and their analytical methodologies, recent developments, and limitations. Additionally, we analyze the advantages and application prospects of multi-omics strategies. This review offers a comprehensive perspective on the food chain, food safety, and food processing from field to table through omics approaches, thereby promoting the stable and sustained development of the food industry.
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Affiliation(s)
- Shuchen Zhang
- Dalian Jinshiwan Laboratory, Dalian 116034, China;
- Department of Food Science, College of Light Industry, Liaoning University, Shenyang 110031, China; (J.C.); (T.L.)
| | - Jianan Chen
- Department of Food Science, College of Light Industry, Liaoning University, Shenyang 110031, China; (J.C.); (T.L.)
| | - Fanhui Gao
- College of Environmental and Safety Engineering, Shenyang University of Chemical Technology, Shenyang 110142, China;
| | - Wentao Su
- State Key Laboratory of Marine Food Processing and Safety Control, Dalian Polytechnic University, Dalian 116034, China;
| | - Tiejing Li
- Department of Food Science, College of Light Industry, Liaoning University, Shenyang 110031, China; (J.C.); (T.L.)
| | - Yuxiao Wang
- Dalian Jinshiwan Laboratory, Dalian 116034, China;
- Department of Food Science, College of Light Industry, Liaoning University, Shenyang 110031, China; (J.C.); (T.L.)
- State Key Laboratory of Marine Food Processing and Safety Control, Dalian Polytechnic University, Dalian 116034, China;
- State Key Laboratory of Food Science and Resources, Nanchang University, Nanchang 330047, China
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Liu H, Liu H, Li J, Wang Y. Review of Recent Modern Analytical Technology Combined with Chemometrics Approach Researches on Mushroom Discrimination and Evaluation. Crit Rev Anal Chem 2022; 54:1560-1583. [PMID: 36154534 DOI: 10.1080/10408347.2022.2124839] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
Abstract
Mushroom is a macrofungus with precious fruiting body, as a food, a tonic, and a medicine, human have discovered and used mushrooms for thousands of years. Nowadays, mushroom is also a "super food" recommended by the World Health Organization (WHO) and Food and Agriculture Organization (FAO), and favored by consumers. Discrimination of mushroom including species, geographic origin, storage time, etc., is an important prerequisite to ensure their edible safety and commodity quality. Moreover, the effective evaluation of its chemical composition can help us better understand the nutritional properties of mushrooms. Modern analytical technologies such as chromatography, spectroscopy and mass spectrometry, etc., are widely used in the discrimination and evaluation researches of mushrooms, and chemometrics is an effective means of scientifically processing the multidimensional information hidden in these analytical technologies. This review will outline the latest applications of modern analytical technology combined with chemometrics in qualitative and quantitative analysis and quality control of mushrooms in recent years. Briefly describe the basic principles of these technologies, and the analytical processes of common chemometrics in mushroom researches will be summarized. Finally, the limitations and application prospects of chromatography, spectroscopy and mass spectrometry technology are discussed in mushroom quality control and evaluation.
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Affiliation(s)
- Hong Liu
- College of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, China
- Medicinal Plants Research Institute, Yunnan Academy of Agricultural Sciences, Kunming, China
| | - Honggao Liu
- College of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, China
- Zhaotong University, Zhaotong, China
| | - Jieqing Li
- College of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, China
| | - Yuanzhong Wang
- Medicinal Plants Research Institute, Yunnan Academy of Agricultural Sciences, Kunming, China
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Chen X, Li J, Liu H, Wang Y. A fast multi-source information fusion strategy based on deep learning for species identification of boletes. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2022; 274:121137. [PMID: 35290943 DOI: 10.1016/j.saa.2022.121137] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2021] [Revised: 02/24/2022] [Accepted: 03/08/2022] [Indexed: 06/14/2023]
Abstract
Wild mushroom market is an important economic source of Yunnan province in China, and its wild mushroom resources are also valuable wealth in the world. This work will put forward a method of species identification and optimize the method in order to maintain the market order and protect the economic benefits of wild mushrooms. Here we establish deep learning (DL) models based on the two-dimensional correlation spectroscopy (2DCOS) images of near-infrared spectroscopy from boletes, and optimize the identification effect of the model. The results show that synchronous 2DCOS is the best method to establish DL model, and when the learning rate was 0.01, the epochs were 40, using stipes and caps data, the identification effect would be further improved. This method retains the complete information of the samples and can provide a fast and noninvasive method for identifying boletes species for market regulators.
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Affiliation(s)
- Xiong Chen
- College of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming 650201, China; Medicinal Plants Research Institute, Yunnan Academy of Agricultural Sciences, Kunming 650200, China
| | - Jieqing Li
- College of Resources and Environmental, Yunnan Agricultural University, Kunming 650201, China
| | - Honggao Liu
- College of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming 650201, China; Zhaotong University, Zhaotong 657000, China.
| | - Yuanzhong Wang
- Medicinal Plants Research Institute, Yunnan Academy of Agricultural Sciences, Kunming 650200, China.
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Azcarate SM, Ríos-Reina R, Amigo JM, Goicoechea HC. Data handling in data fusion: Methodologies and applications. Trends Analyt Chem 2021. [DOI: 10.1016/j.trac.2021.116355] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
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Zhao R, Su M, Zhao Y, Chen G, Chen A, Yang S. Chemical Analysis Combined with Multivariate Statistical Methods to Determine the Geographical Origin of Milk from Four Regions in China. Foods 2021; 10:foods10051119. [PMID: 34070041 PMCID: PMC8158098 DOI: 10.3390/foods10051119] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Revised: 05/12/2021] [Accepted: 05/14/2021] [Indexed: 12/30/2022] Open
Abstract
Traceability of milk origin in China is conducive to the implementation of the protection of regional products. In order to distinguish milk from different geographical distances in China, we traced the milk of eight farms in four neighboring provinces of China (Inner Mongolia autonomous region, Hebei, Ningxia Hui autonomous and Shaanxi), and multivariate data analysis was applied to the data including elemental analysis, stable isotope analysis and fatty acid analysis. In addition, orthogonal partial least squares discriminant analysis (OPLS-DA) is used to determine the optimal classification model, and it is explored whether the combination of different technologies is better than a single technical analysis. It was confirmed that in the inter-provincial samples, the combination of the two techniques was better than the analysis using a single technique (fatty acids: R2 = 0.716, Q2 = 0.614; fatty acid-binding isotopes: R2 = 0.760, Q2 = 0.635). At the same time, milk produced by farms with different distances of less than 11 km in each province was discriminated, and the discriminant distance was successfully reduced to 0.7 km (Ningxia Hui Autonomous Region: the distance between the two farms was 0.7 km, R2 = 0.771, Q2 = 0.631). For short-distance samples, the combination multiple technologies are not completely superior to a single technique, and sometimes, it is easy to cause model over-fitting.
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Affiliation(s)
- Ruting Zhao
- Institute of Quality Standard and Testing Technology for Agro-Products, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (R.Z.); (M.S.); (G.C.); (A.C.); (S.Y.)
- Key Laboratory of Agro-Product Quality and Safety, Ministry of Agriculture, Beijing 100081, China
| | - Meicheng Su
- Institute of Quality Standard and Testing Technology for Agro-Products, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (R.Z.); (M.S.); (G.C.); (A.C.); (S.Y.)
- Key Laboratory of Agro-Product Quality and Safety, Ministry of Agriculture, Beijing 100081, China
| | - Yan Zhao
- Institute of Quality Standard and Testing Technology for Agro-Products, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (R.Z.); (M.S.); (G.C.); (A.C.); (S.Y.)
- Key Laboratory of Agro-Product Quality and Safety, Ministry of Agriculture, Beijing 100081, China
- Correspondence:
| | - Gang Chen
- Institute of Quality Standard and Testing Technology for Agro-Products, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (R.Z.); (M.S.); (G.C.); (A.C.); (S.Y.)
- Key Laboratory of Agro-Product Quality and Safety, Ministry of Agriculture, Beijing 100081, China
| | - Ailiang Chen
- Institute of Quality Standard and Testing Technology for Agro-Products, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (R.Z.); (M.S.); (G.C.); (A.C.); (S.Y.)
- Key Laboratory of Agro-Product Quality and Safety, Ministry of Agriculture, Beijing 100081, China
| | - Shuming Yang
- Institute of Quality Standard and Testing Technology for Agro-Products, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (R.Z.); (M.S.); (G.C.); (A.C.); (S.Y.)
- Key Laboratory of Agro-Product Quality and Safety, Ministry of Agriculture, Beijing 100081, China
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Qie M, Zhang B, Li Z, Zhao S, Zhao Y. Data fusion by ratio modulation of stable isotope, multi-element, and fatty acids to improve geographical traceability of lamb. Food Control 2021. [DOI: 10.1016/j.foodcont.2020.107549] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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Zhou L, Zhang C, Qiu Z, He Y. Information fusion of emerging non-destructive analytical techniques for food quality authentication: A survey. Trends Analyt Chem 2020. [DOI: 10.1016/j.trac.2020.115901] [Citation(s) in RCA: 36] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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