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For: Webster MT, Smith NGC, Hultin-Rosenberg L, Arndt PF, Ellegren H. Male-driven biased gene conversion governs the evolution of base composition in human alu repeats. Mol Biol Evol 2005;22:1468-74. [PMID: 15772377 DOI: 10.1093/molbev/msi136] [Citation(s) in RCA: 61] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]  Open
Number Cited by Other Article(s)
1
Charlesworth D, Zhang Y, Bergero R, Graham C, Gardner J, Yong L. Using GC Content to Compare Recombination Patterns on the Sex Chromosomes and Autosomes of the Guppy, Poecilia reticulata, and Its Close Outgroup Species. Mol Biol Evol 2021;37:3550-3562. [PMID: 32697821 DOI: 10.1093/molbev/msaa187] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]  Open
2
Korunes KL, Noor MAF. Pervasive gene conversion in chromosomal inversion heterozygotes. Mol Ecol 2018;28:1302-1315. [PMID: 30387889 DOI: 10.1111/mec.14921] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2018] [Revised: 09/27/2018] [Accepted: 10/22/2018] [Indexed: 12/30/2022]
3
Chudasama DY, Aladag Z, Felicien MI, Hall M, Beeson J, Asadi N, Gidron Y, Karteris E, Anikin VB. Prognostic value of the DNA integrity index in patients with malignant lung tumors. Oncotarget 2018;9:21281-21288. [PMID: 29765538 PMCID: PMC5940399 DOI: 10.18632/oncotarget.25086] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2017] [Accepted: 03/06/2018] [Indexed: 11/25/2022]  Open
4
Statistical Methods for Identifying Sequence Motifs Affecting Point Mutations. Genetics 2016;205:843-856. [PMID: 27974498 DOI: 10.1534/genetics.116.195677] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2016] [Accepted: 12/01/2016] [Indexed: 11/18/2022]  Open
5
Korunes KL, Noor MAF. Gene conversion and linkage: effects on genome evolution and speciation. Mol Ecol 2016;26:351-364. [DOI: 10.1111/mec.13736] [Citation(s) in RCA: 43] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2016] [Revised: 06/07/2016] [Accepted: 06/22/2016] [Indexed: 12/12/2022]
6
Figuet E, Nabholz B, Bonneau M, Mas Carrio E, Nadachowska-Brzyska K, Ellegren H, Galtier N. Life History Traits, Protein Evolution, and the Nearly Neutral Theory in Amniotes. Mol Biol Evol 2016;33:1517-27. [DOI: 10.1093/molbev/msw033] [Citation(s) in RCA: 58] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]  Open
7
Mugal CF, Weber CC, Ellegren H. GC-biased gene conversion links the recombination landscape and demography to genomic base composition. Bioessays 2015;37:1317-26. [DOI: 10.1002/bies.201500058] [Citation(s) in RCA: 58] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
8
Knief U, Schielzeth H, Ellegren H, Kempenaers B, Forstmeier W. A prezygotic transmission distorter acting equally in female and male zebra finchesTaeniopygia guttata. Mol Ecol 2015;24:3846-59. [DOI: 10.1111/mec.13281] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2015] [Revised: 06/13/2015] [Accepted: 06/17/2015] [Indexed: 12/25/2022]
9
Figuet E, Ballenghien M, Romiguier J, Galtier N. Biased gene conversion and GC-content evolution in the coding sequences of reptiles and vertebrates. Genome Biol Evol 2014;7:240-50. [PMID: 25527834 PMCID: PMC4316630 DOI: 10.1093/gbe/evu277] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]  Open
10
Weber CC, Boussau B, Romiguier J, Jarvis ED, Ellegren H. Evidence for GC-biased gene conversion as a driver of between-lineage differences in avian base composition. Genome Biol 2014;15:549. [PMID: 25496599 PMCID: PMC4290106 DOI: 10.1186/s13059-014-0549-1] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2014] [Accepted: 11/19/2014] [Indexed: 11/23/2022]  Open
11
Robinson MC, Stone EA, Singh ND. Population genomic analysis reveals no evidence for GC-biased gene conversion in Drosophila melanogaster. Mol Biol Evol 2013;31:425-33. [PMID: 24214536 DOI: 10.1093/molbev/mst220] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]  Open
12
Segmenting the human genome based on states of neutral genetic divergence. Proc Natl Acad Sci U S A 2013;110:14699-704. [PMID: 23959903 DOI: 10.1073/pnas.1221792110] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]  Open
13
Cagliani R, Guerini FR, Rubio-Acero R, Baglio F, Forni D, Agliardi C, Griffanti L, Fumagalli M, Pozzoli U, Riva S, Calabrese E, Sikora M, Casals F, Comi GP, Bresolin N, Cáceres M, Clerici M, Sironi M. Long-standing balancing selection in the THBS4 gene: influence on sex-specific brain expression and gray matter volumes in Alzheimer disease. Hum Mutat 2013;34:743-53. [PMID: 23420636 DOI: 10.1002/humu.22301] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2012] [Accepted: 02/01/2013] [Indexed: 01/08/2023]
14
Lartillot N. Interaction between selection and biased gene conversion in mammalian protein-coding sequence evolution revealed by a phylogenetic covariance analysis. Mol Biol Evol 2012;30:356-68. [PMID: 23024185 DOI: 10.1093/molbev/mss231] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]  Open
15
Popa A, Samollow P, Gautier C, Mouchiroud D. The sex-specific impact of meiotic recombination on nucleotide composition. Genome Biol Evol 2012;4:412-22. [PMID: 22417915 PMCID: PMC3318449 DOI: 10.1093/gbe/evs023] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]  Open
16
Axelsson E, Webster MT, Ratnakumar A, Ponting CP, Lindblad-Toh K. Death of PRDM9 coincides with stabilization of the recombination landscape in the dog genome. Genome Res 2012;22:51-63. [PMID: 22006216 PMCID: PMC3246206 DOI: 10.1101/gr.124123.111] [Citation(s) in RCA: 93] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2011] [Accepted: 10/05/2011] [Indexed: 11/25/2022]
17
Late replicating domains are highly recombining in females but have low male recombination rates: implications for isochore evolution. PLoS One 2011;6:e24480. [PMID: 21949720 PMCID: PMC3176772 DOI: 10.1371/journal.pone.0024480] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2011] [Accepted: 08/11/2011] [Indexed: 01/01/2023]  Open
18
Nabholz B, Künstner A, Wang R, Jarvis ED, Ellegren H. Dynamic evolution of base composition: causes and consequences in avian phylogenomics. Mol Biol Evol 2011;28:2197-210. [PMID: 21393604 PMCID: PMC3144382 DOI: 10.1093/molbev/msr047] [Citation(s) in RCA: 67] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]  Open
19
Katzman S, Capra JA, Haussler D, Pollard KS. Ongoing GC-biased evolution is widespread in the human genome and enriched near recombination hot spots. Genome Biol Evol 2011;3:614-26. [PMID: 21697099 PMCID: PMC3157837 DOI: 10.1093/gbe/evr058] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]  Open
20
Capra JA, Pollard KS. Substitution patterns are GC-biased in divergent sequences across the metazoans. Genome Biol Evol 2011;3:516-27. [PMID: 21670083 PMCID: PMC3138425 DOI: 10.1093/gbe/evr051] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]  Open
21
Clément Y, Arndt PF. Substitution patterns are under different influences in primates and rodents. Genome Biol Evol 2011;3:236-45. [PMID: 21339508 PMCID: PMC3068003 DOI: 10.1093/gbe/evr011] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
22
Li M, Chen SS. The tendency to recreate ancestral CG dinucleotides in the human genome. BMC Evol Biol 2011;11:3. [PMID: 21208429 PMCID: PMC3025853 DOI: 10.1186/1471-2148-11-3] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2010] [Accepted: 01/05/2011] [Indexed: 12/31/2022]  Open
23
Ratnakumar A, Mousset S, Glémin S, Berglund J, Galtier N, Duret L, Webster MT. Detecting positive selection within genomes: the problem of biased gene conversion. Philos Trans R Soc Lond B Biol Sci 2010;365:2571-80. [PMID: 20643747 DOI: 10.1098/rstb.2010.0007] [Citation(s) in RCA: 116] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]  Open
24
Fumagalli M, Cagliani R, Riva S, Pozzoli U, Biasin M, Piacentini L, Comi GP, Bresolin N, Clerici M, Sironi M. Population genetics of IFIH1: ancient population structure, local selection, and implications for susceptibility to type 1 diabetes. Mol Biol Evol 2010;27:2555-66. [PMID: 20538742 DOI: 10.1093/molbev/msq141] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]  Open
25
Contrasting GC-content dynamics across 33 mammalian genomes: relationship with life-history traits and chromosome sizes. Genome Res 2010;20:1001-9. [PMID: 20530252 DOI: 10.1101/gr.104372.109] [Citation(s) in RCA: 148] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
26
Aleshin A, Zhi D. Recombination-associated sequence homogenization of neighboring Alu elements: signature of nonallelic gene conversion. Mol Biol Evol 2010;27:2300-11. [PMID: 20453015 DOI: 10.1093/molbev/msq116] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]  Open
27
Backström N, Forstmeier W, Schielzeth H, Mellenius H, Nam K, Bolund E, Webster MT, Öst T, Schneider M, Kempenaers B, Ellegren H. The recombination landscape of the zebra finch Taeniopygia guttata genome. Genome Res 2010;20:485-95. [PMID: 20357052 PMCID: PMC2847751 DOI: 10.1101/gr.101410.109] [Citation(s) in RCA: 168] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2009] [Accepted: 12/02/2009] [Indexed: 12/18/2022]
28
Navarro-Costa P, Gonçalves J, Plancha CE. The AZFc region of the Y chromosome: at the crossroads between genetic diversity and male infertility. Hum Reprod Update 2010;16:525-42. [PMID: 20304777 PMCID: PMC2918367 DOI: 10.1093/humupd/dmq005] [Citation(s) in RCA: 99] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
29
Duret L, Galtier N. Biased gene conversion and the evolution of mammalian genomic landscapes. Annu Rev Genomics Hum Genet 2009;10:285-311. [PMID: 19630562 DOI: 10.1146/annurev-genom-082908-150001] [Citation(s) in RCA: 468] [Impact Index Per Article: 31.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
30
Qi YJ, Qiu WY. Symmetry Analysis of an X-palindrome in Human and Chimpanzee. CHINESE J CHEM PHYS 2009. [DOI: 10.1088/1674-0068/22/04/401-405] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
31
GC content and recombination: reassessing the causal effects for the Saccharomyces cerevisiae genome. Genetics 2009;183:31-8. [PMID: 19546316 DOI: 10.1534/genetics.109.105049] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
32
Pink CJ, Swaminathan SK, Dunham I, Rogers J, Ward A, Hurst LD. Evidence that replication-associated mutation alone does not explain between-chromosome differences in substitution rates. Genome Biol Evol 2009;1:13-22. [PMID: 20333173 PMCID: PMC2817397 DOI: 10.1093/gbe/evp001] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/05/2009] [Indexed: 12/12/2022]  Open
33
Hotspots of biased nucleotide substitutions in human genes. PLoS Biol 2009;7:e26. [PMID: 19175294 PMCID: PMC2631073 DOI: 10.1371/journal.pbio.1000026] [Citation(s) in RCA: 129] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2008] [Accepted: 12/11/2008] [Indexed: 11/30/2022]  Open
34
Duret L, Galtier N. Comment on "Human-specific gain of function in a developmental enhancer". Science 2009;323:714; author reply 714. [PMID: 19197042 DOI: 10.1126/science.1165848] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
35
Freudenberg J, Wang M, Yang Y, Li W. Partial correlation analysis indicates causal relationships between GC-content, exon density and recombination rate in the human genome. BMC Bioinformatics 2009;10 Suppl 1:S66. [PMID: 19208170 PMCID: PMC2648766 DOI: 10.1186/1471-2105-10-s1-s66] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]  Open
36
Galtier N, Duret L, Glémin S, Ranwez V. GC-biased gene conversion promotes the fixation of deleterious amino acid changes in primates. Trends Genet 2009;25:1-5. [DOI: 10.1016/j.tig.2008.10.011] [Citation(s) in RCA: 153] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2008] [Revised: 10/17/2008] [Accepted: 10/24/2008] [Indexed: 01/22/2023]
37
Cao J, Wu X, Jin Y. Lower GC-content in editing exons: implications for regulation by molecular characteristics maintained by selection. Gene 2008;421:14-9. [PMID: 18632225 DOI: 10.1016/j.gene.2008.05.012] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2007] [Revised: 03/01/2008] [Accepted: 05/21/2008] [Indexed: 01/26/2023]
38
Duret L, Arndt PF. The impact of recombination on nucleotide substitutions in the human genome. PLoS Genet 2008;4:e1000071. [PMID: 18464896 PMCID: PMC2346554 DOI: 10.1371/journal.pgen.1000071] [Citation(s) in RCA: 254] [Impact Index Per Article: 15.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2007] [Accepted: 04/11/2008] [Indexed: 01/19/2023]  Open
39
Pozzoli U, Menozzi G, Fumagalli M, Cereda M, Comi GP, Cagliani R, Bresolin N, Sironi M. Both selective and neutral processes drive GC content evolution in the human genome. BMC Evol Biol 2008;8:99. [PMID: 18371205 PMCID: PMC2292697 DOI: 10.1186/1471-2148-8-99] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2007] [Accepted: 03/27/2008] [Indexed: 11/10/2022]  Open
40
Bush EC, Lahn BT. A genome-wide screen for noncoding elements important in primate evolution. BMC Evol Biol 2008;8:17. [PMID: 18215302 PMCID: PMC2242780 DOI: 10.1186/1471-2148-8-17] [Citation(s) in RCA: 71] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2007] [Accepted: 01/23/2008] [Indexed: 01/23/2023]  Open
41
Karro JE, Peifer M, Hardison RC, Kollmann M, von Grünberg HH. Exponential decay of GC content detected by strand-symmetric substitution rates influences the evolution of isochore structure. Mol Biol Evol 2007;25:362-74. [PMID: 18042807 DOI: 10.1093/molbev/msm261] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
42
Kelkar YD, Tyekucheva S, Chiaromonte F, Makova KD. The genome-wide determinants of human and chimpanzee microsatellite evolution. Genome Res 2007;18:30-8. [PMID: 18032720 DOI: 10.1101/gr.7113408] [Citation(s) in RCA: 174] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
43
Biased distributions and decay of long interspersed nuclear elements in the chicken genome. Genetics 2007;178:573-81. [PMID: 17947446 DOI: 10.1534/genetics.106.061861] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]  Open
44
Dreszer TR, Wall GD, Haussler D, Pollard KS. Biased clustered substitutions in the human genome: the footprints of male-driven biased gene conversion. Genome Res 2007;17:1420-30. [PMID: 17785536 PMCID: PMC1987345 DOI: 10.1101/gr.6395807] [Citation(s) in RCA: 89] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
45
Ellegren H. Molecular evolutionary genomics of birds. Cytogenet Genome Res 2007;117:120-30. [PMID: 17675852 DOI: 10.1159/000103172] [Citation(s) in RCA: 110] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2006] [Accepted: 09/09/2006] [Indexed: 11/19/2022]  Open
46
A macaque's-eye view of human insertions and deletions: differences in mechanisms. PLoS Comput Biol 2007;3:1772-82. [PMID: 17941704 PMCID: PMC1976337 DOI: 10.1371/journal.pcbi.0030176] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2007] [Accepted: 07/26/2007] [Indexed: 11/19/2022]  Open
47
Galtier N, Duret L. Adaptation or biased gene conversion? Extending the null hypothesis of molecular evolution. Trends Genet 2007;23:273-7. [PMID: 17418442 DOI: 10.1016/j.tig.2007.03.011] [Citation(s) in RCA: 165] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2006] [Revised: 03/01/2007] [Accepted: 03/21/2007] [Indexed: 11/26/2022]
48
Ellegren H. Characteristics, causes and evolutionary consequences of male-biased mutation. Proc Biol Sci 2007;274:1-10. [PMID: 17134994 PMCID: PMC1679872 DOI: 10.1098/rspb.2006.3720] [Citation(s) in RCA: 127] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]  Open
49
Schmegner C, Hoegel J, Vogel W, Assum G. The rate, not the spectrum, of base pair substitutions changes at a GC-content transition in the human NF1 gene region: implications for the evolution of the mammalian genome structure. Genetics 2006;175:421-8. [PMID: 17057231 PMCID: PMC1775011 DOI: 10.1534/genetics.106.064386] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
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Gaffney DJ, Keightley PD. Genomic selective constraints in murid noncoding DNA. PLoS Genet 2006;2:e204. [PMID: 17166057 PMCID: PMC1657059 DOI: 10.1371/journal.pgen.0020204] [Citation(s) in RCA: 57] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2006] [Accepted: 10/18/2006] [Indexed: 02/04/2023]  Open
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