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El-Nahass EES, Elwan MM. Comparative histological and ultrastructural features of the tongue of the mallard domestic duck, Anas platyrhynchos f. domestica, Anatidae (Linnaeus, 1758) in different two age stages (post-hatching [P2] and adult female) captured from Egypt. Microsc Res Tech 2024; 87:1183-1200. [PMID: 38289084 DOI: 10.1002/jemt.24504] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2023] [Revised: 12/28/2023] [Accepted: 01/14/2024] [Indexed: 04/19/2024]
Abstract
The domestic duck is classified as a specialist filter-feeder bird living in the water. These birds also use grazing and pecking as terrestrial feeding methods. The tongues of domestic ducks, similar to those of other Anseriformes, exhibit numerous types and shapes of mechanical papillae that serve a number of purposes when collecting food. The current study attempts to describe the morphological characteristics of the tongue as well as the mechanical papillae's development. In addition, the study aims to determine whether the papillae observed post-hatching (P2) exhibit similar morphology to those found in adult female avian species, as well as to investigate the readiness of the tongue to fulfill its feeding function following hatching. The comprehensive examination of lingual mucosa is examined about the structural modifications necessary for this variety of feeding activities. In this study, the tongues of nine young (P2) and adult female were used. The tongue had three distinct parts: the apex, which had a lingual nail on its ventral surface; the body, which exhibits numerous small and large conical papillae on its lateral sides and a lingual prominence in the caudal region; and the root, which is covered with numerous conical papillae of varying sizes. Conical, filiform, and hair-like mechanical papillae, the three types of food filtration apparatus, are present in both stages. The intraoral transfer involves several structures, including the median groove, lingual combs, and the rostral border of the lingual prominence. The rostral border of the lingual prominence is characterized by distinct rows of conical papillae. The histological analysis demonstrated the presence of both keratinized and nonkeratinized epithelium on different tongue regions. The lingual salivary glands in the rostral and caudal lingual salivary glands exhibit a pronounced periodic acid-Schiff-positive reaction. Additionally, the yellow adipose tissue and sensory receptors, namely the Grandry and Herbst corpuscles, which collectively form the bill-tongue organ that monitors the movement of food. These results conclude the presence of microstructural species-specific alterations in specific tongue areas of domestic ducks' lingual mucosa. These modifications are formed by the filtering mechanism and terrestrial feeding mechanisms, such as grazing or pecking. Following hatching, the tongue of the domestic duck undergoes significant development, primarily in preparation for grazing activities. The anatomical and histological structure of the young (P2) tongue exhibited similarities to that of the adult female domestic duck while also displaying certain variations that could potentially be attributed to the bird's habitat and mode of feeding. RESEARCH HIGHLIGHTS: The results of this study concluded that the domestic duck exhibit a complex tongue structure characterized by the arrangement and morphology of its mechanical papillae, the presence of the lingual prominence with distinctive shape and the lingual comb. These features are believed to be adaptations that enable the duck to actively and efficiently filter food particles from water, serving as its primary feeding mechanism. Additionally, the tongue of domestic ducks is specifically adapted to facilitate various terrestrial activities, such as grazing and pecking. This adaptation is achieved through the presence of conical papillae and a lingual nail. These investigations facilitate our comprehension of both the anatomical and histological characteristics of the domestic duck tongue, as well as enhance our understanding of bird adaptations to various feeding mechanisms.
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Affiliation(s)
| | - Mona M Elwan
- Zoology Department, Faculty of Science, Tanta University, Tanta, Egypt
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Taghipour A, Ghodsian S, Jabbari M, Rajabpour V, Bahadory S, Malih N, Solhjoo K, Zibaei M, Abdoli A. The global epidemiology of Microsporidia infection in birds: A systematic review and meta-analysis. Int J Environ Health Res 2024; 34:2180-2196. [PMID: 37266992 DOI: 10.1080/09603123.2023.2219988] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2023] [Accepted: 05/25/2023] [Indexed: 06/03/2023]
Abstract
This study aimed to assess the global status and genetic diversity of Microsporidia infection in different birds. An online search was conducted in international databases from 1 January 1990 to 30 June 2022. A total of 34 articles (including 37 datasets) were included for the final meta-analysis. The pooled global prevalence of Microsporidia infection in birds was 14.6% (95% CI: 11.6-18.1). The highest prevalence of Microsporidia was found in wild waterfowl which was 54.5% (28.1-78.6). In terms of detection methods, the pooled prevalence was estimated to be 21.2% (95% CI: 12.1-34.4) and 13.4% (95% CI: 10.3-17.3) for using microscopic and molecular detection methods, respectively. Enterocytozoon bieneusi was the most common pathogen (24/31; 77.42% of the studies) according to PCR-based methods, and genotype D was the highest reported genotype (nine studies). In conclusion, designing strategies for the control and prevention of Microsporidia infection in birds should be recommended.
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Affiliation(s)
- Ali Taghipour
- Zoonoses Research Center, Jahrom University of Medical Sciences, Jahrom, Iran
| | - Sahar Ghodsian
- Department of Parasitology and Mycology, School of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Mahdi Jabbari
- Department of Microbiology, Faculty of Basic Science, Tabriz Branch, Islamic Azad University, Tabriz, Iran
| | - Vahid Rajabpour
- Zoonoses Research Center, Jahrom University of Medical Sciences, Jahrom, Iran
- Student Research Committee, Jahrom University of Medical Sciences, Jahrom, Iran
| | - Saeed Bahadory
- Department of Parasitology, Faculty of Medical Sciences, Tarbiat Modares University, Tehran, Iran
| | - Narges Malih
- Global Health Research Group, University of the Balearic Islands (UIB), Palma, Spain
- Social Determinants of Health Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Kavous Solhjoo
- Zoonoses Research Center, Jahrom University of Medical Sciences, Jahrom, Iran
- Department of Parasitology and Mycology, Jahrom University of Medical Sciences, Jahrom, Iran
| | - Mohammad Zibaei
- Department of Parasitology and Mycology, School of Medicine, Alborz University of Medical Sciences, Karaj, Iran
- Evidence-Based Phytotherapy and Complementary Medicine Research Center, Alborz University of Medical Sciences, Karaj, Iran
| | - Amir Abdoli
- Zoonoses Research Center, Jahrom University of Medical Sciences, Jahrom, Iran
- Department of Parasitology and Mycology, Jahrom University of Medical Sciences, Jahrom, Iran
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Petrou EL, Scott LC, McKeeman CM, Ramey AM. Molecular sexing of birds using quantitative PCR (qPCR) of sex-linked genes and logistic regression models. Mol Ecol Resour 2024; 24:e13946. [PMID: 38436617 DOI: 10.1111/1755-0998.13946] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Revised: 01/26/2024] [Accepted: 02/19/2024] [Indexed: 03/05/2024]
Abstract
The ability to sex individuals is an important component of many behavioural and ecological investigations and provides information for demographic models used in conservation and species management. However, many birds are difficult to sex using morphological characters or traditional molecular sexing methods. In this study, we developed probabilistic models for sexing birds using quantitative PCR (qPCR) data. First, we quantified distributions of gene copy numbers at a set of six sex-linked genes, including the sex-determining gene DMRT1, for individuals across 17 species and seven orders of birds (n = 150). Using these data, we built predictive logistic models for sex identification and tested their performance with independent samples from 51 species and 13 orders (n = 209). Models using the two loci most highly correlated with sex had greater accuracy than models using the full set of sex-linked loci, across all taxonomic levels of analysis. Sex identification was highly accurate when individuals to be assigned were of species used in model building. Our analytical approach was widely applicable across diverse neognath bird lineages spanning millions of years of evolutionary divergence. Unlike previous methods, our probabilistic framework incorporates uncertainty around qPCR measurements as well as biological variation within species into decision-making rules. We anticipate that this method will be useful for sexing birds, including those of high conservation concern and/or subsistence value, that have proven difficult to sex using traditional approaches. Additionally, the general analytical framework presented in this paper may also be applicable to other organisms with sex chromosomes.
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Affiliation(s)
- Eleni L Petrou
- U.S. Geological Survey, Alaska Science Center, Anchorage, Alaska, USA
| | - Laura C Scott
- U.S. Geological Survey, Alaska Science Center, Anchorage, Alaska, USA
| | - Cherie M McKeeman
- U.S. Geological Survey, Alaska Science Center, Anchorage, Alaska, USA
| | - Andrew M Ramey
- U.S. Geological Survey, Alaska Science Center, Anchorage, Alaska, USA
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Leitão A, Gahr M. Babbling opens the sensory phase for imitative vocal learning. Proc Natl Acad Sci U S A 2024; 121:e2312323121. [PMID: 38621117 DOI: 10.1073/pnas.2312323121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2023] [Accepted: 02/07/2024] [Indexed: 04/17/2024] Open
Abstract
Zebra finches, a species of songbirds, learn to sing by creating an auditory template through the memorization of model songs (sensory learning phase) and subsequently translating these perceptual memories into motor skills (sensorimotor learning phase). It has been traditionally believed that babbling in juvenile birds initiates the sensorimotor phase while the sensory phase of song learning precedes the onset of babbling. However, our findings challenge this notion by demonstrating that testosterone-induced premature babbling actually triggers the onset of the sensory learning phase instead. We reveal that juvenile birds must engage in babbling and self-listening to acquire the tutor song as the template. Notably, the sensory learning of the template in songbirds requires motor vocal activity, reflecting the observation that prelinguistic babbling in humans plays a crucial role in auditory learning for language acquisition.
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Affiliation(s)
- Albertine Leitão
- Department of Behavioural Neurobiology, Max Planck Institute for Biological Intelligence, 82319 Seewiesen, Germany
| | - Manfred Gahr
- Department of Behavioural Neurobiology, Max Planck Institute for Biological Intelligence, 82319 Seewiesen, Germany
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Dufour P, Sayol F, Cooke R, Blackburn TM, Gallien L, Griesser M, Steinbauer MJ, Faurby S. The importance of migratory drop-off for island colonization in birds. Proc Biol Sci 2024; 291:20232926. [PMID: 38628117 PMCID: PMC11021927 DOI: 10.1098/rspb.2023.2926] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2023] [Accepted: 03/14/2024] [Indexed: 04/19/2024] Open
Abstract
Seasonal migration is an underappreciated driver of animal diversification. Changes in migratory behaviour may favour the establishment of sedentary founder populations and promote speciation if there is sufficient reproductive isolation between sedentary and migratory populations. From a systematic literature review, we here quantify the role of migratory drop-off-the loss of migratory behaviour-in promoting speciation in birds on islands. We identify at least 157 independent colonization events likely initiated by migratory species that led to speciation, including 44 cases among recently extinct species. By comparing, for all islands, the proportion of island endemic species that derived from migratory drop-off with the proportion of migratory species among potential colonizers, we showed that seasonal migration has a larger effect on island endemic richness than direct dispersal. We also found that the role of migration in island colonization increases with the geographic isolation of islands. Furthermore, the success of speciation events depends in part on species biogeographic and ecological factors, here positively associated with greater range size and larger flock sizes. These results highlight the importance of shifts in migratory behaviour in the speciation process and calls for greater consideration of migratory drop-off in the biogeographic distribution of birds.
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Affiliation(s)
- Paul Dufour
- Department of Biological & Environmental Sciences, University of Gothenburg, Gothenburg, Sweden
- Gothenburg Global Biodiversity Centre, Gothenburg, Sweden
| | - Ferran Sayol
- Centre for Ecological Research and Forestry Applications (CREAF), E08193 Bellaterra (Cerdanyola del Vallès), Catalonia, Spain
| | - Rob Cooke
- UK Centre for Ecology & Hydrology, Maclean Building, Crowmarsh Gifford, Wallingford, Oxfordshire OX10 8BB, UK
| | - Tim M. Blackburn
- Centre for Biodiversity and Environment Research, Department of Genetics, Evolution and Environment, University College London, London WC1E 6BT, UK
- Institute of Zoology, Zoological Society of London, London NW1 4RY, UK
| | - Laure Gallien
- LECA, CNRS, Univ. Grenoble Alpes, Univ. Savoie Mont Blanc, Chambéry, France
| | - Michael Griesser
- Department of Biology, University of Konstanz, Konstanz, Germany
- Center for the Advanced Study of Collective Behavior, University of Konstanz, Konstanz, Germany
- Department of Collective Behavior, Max Planck Institute of Animal Behavior, Konstanz, Germany
| | - Manuel J. Steinbauer
- Bayreuth Center of Ecology and Environmental Research (BayCEER) & Bayreuth Center of Sport Science (BaySpo), University of Bayreuth, Bayreuth, Germany
- Department of Biological Sciences, University of Bergen, Bergen, Norway
| | - Søren Faurby
- Department of Biological & Environmental Sciences, University of Gothenburg, Gothenburg, Sweden
- Gothenburg Global Biodiversity Centre, Gothenburg, Sweden
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Buchmann R, Rodrigues T. Cervical anatomy and its relation to foraging habits in aquatic birds (Aves: Neornithes: Neoaves). Anat Rec (Hoboken) 2024. [PMID: 38596909 DOI: 10.1002/ar.25446] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2023] [Revised: 03/19/2024] [Accepted: 03/19/2024] [Indexed: 04/11/2024]
Abstract
Birds have extremely flexible necks, which help in their search for food. However, studies on the variation in bird cervical anatomy and its relationship with foraging are rare, despite the different habits presented between species. Here, we analyze the anatomy of the neck of aquatic birds and relate it to their foraging strategies. We dissected specimens representing four species of Charadriiformes, 11 species of Phaethoquornithes, and two specimens belonging to the outgroup Telluraves. We chose to emphasize Charadriiformes and Phaethoquornithes because they present several strategies that require cervical mobility and stability. We note that vertebral anatomy and dimensions vary, which affects the shape and size of the soft tissues attached throughout the neck. The synovial cartilage present in the articulatio intercorporalis represents an additional length in the neck, however, this is not longer than that observed in animals with intervertebral discs. Our analysis indicates that birds have a prevalence of dorsoventral movements in the middle of the neck and lateral and rotational movements near the base of the neck, while the region near the head presents a wide range of movement in all directions. Cervical ligaments and muscles throughout the neck provide stability in all segments, although the robustness of the soft tissues indicates that the most caudal portion of the neck is the most stable. The vertebral and soft tissue anatomy is consistent with the extensive mobility in pitching, yaw, and roll movements performed mainly by the head and first segment of the neck during the different foraging of the analyzed birds. Furthermore, the muscles closer to the skull are robust and allow the execution of a variety of habits to capture food in different species. The subsequent cervical segments present differences that explain their reduction in mobility, but they are equally stable.
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Affiliation(s)
- Richard Buchmann
- Laboratório de Paleontologia, Departamento de Ciências Biológicas, Universidade Federal do Espírito Santo, Vitória, Brazil
- Programa de Pós-graduação em Ciências Biológicas, Universidade Federal do Espírito Santo, Vitória, Brazil
| | - Taissa Rodrigues
- Laboratório de Paleontologia, Departamento de Ciências Biológicas, Universidade Federal do Espírito Santo, Vitória, Brazil
- Programa de Pós-graduação em Ciências Biológicas, Universidade Federal do Espírito Santo, Vitória, Brazil
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Sousa MA, Lamelas-López L, Elias RB, Gabriel R, Borges PAV. A multitaxa approach to biodiversity inventory in Matela protected area (Terceira, Azores, Portugal). Biodivers Data J 2024; 12:e121884. [PMID: 38628453 PMCID: PMC11019259 DOI: 10.3897/bdj.12.e121884] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2024] [Accepted: 03/28/2024] [Indexed: 04/19/2024] Open
Abstract
Background This manuscript is the first contribution of the project, "Matela - uma ilha de biodiversidade" ("Matela - an island of biodiversity"), that aims to restore the native vegetation within the Azorean Protected Area of the Terceira Island Nature Park known as the "Protected Area for the Management of Habitats or Species of Matela" (TER08), situated on Terceira Island, the Azores Archipelago, Portugal. This small fragment of native forest, positioned at a low-medium altitude (300-400 m a.s.l.), is facing some conservation impacts as a consequence of the spread of different invasive exotic plant species, mainly Pittosporumundulatum, Rubusulmifolius and Hedychiumgardnerianum. The database we present encompasses diverse taxonomic groups, including bryophytes, vascular plants, arthropods, birds and mammals. It is derived from intensive sampling campaigns conducted in 2022, but some data from a previous vascular plant survey in 2015 were also included. The objective of this study was to provide an updated inventory of bryophytes, vascular plants, arthropods, birds and mammals within this protected area. In this way we are providing the reference conditions necessary for the monitoring of the impacts of the current ongoing restoration efforts within the project "Matela - an island of biodiversity". Whenever feasible, the present inventory is juxtaposed with historical data from previous surveys conducted in Matela. New information In the realm of bryophytes, our analysis revealed the presence of 75 taxa, comprising 44 mosses and 32 liverworts. Amongst these, 71 were indigenous, while three remained indeterminate and one, Campylopusintroflexus, was identified as invasive. A comparison with previous historical data revealed a decrease in species richness, which was partially counterbalanced by the discovery of 23 new recorded species in the area.Regarding vascular plants, we distinguished 54 species, comprising 28 indigenous and 26 introduced taxa. Almost 80% of the inventoried species (n = 43) were newly documented in Matela.The study of arthropods encompassed a total of 103 taxa. Within the realm of soil arthropods, we documented eight indigenous and 25 introduced taxa, witnessing the disappearance of endemic species alongside a substantial increase in introduced ones between 2002 and 2022. Canopy arthropods, totalling 36 indigenous and 18 introduced taxa, exhibited few changes when compared with data from 2002. SLAM traps captured 24 indigenous and 15 introduced arthropod taxa and no historical data are available for comparison.As for avian species, we noted 12 indigenous birds and one introduced species, confirming the presence of most of the historical recorded native species.The mammalian census revealed eight introduced species, setting new precedents for Matela, alongside the identification of one endemic species: the Azorean endemic bat Nyctalusazoreum.
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Affiliation(s)
- Mariana A. Sousa
- Mestrado em Gestão e Conservação da Natureza, University of the Azores Rua Capitão João d´Ávila, Pico da Urze 9700-042, Angra do Heroísmo, Azores, PortugalMestrado em Gestão e Conservação da Natureza, University of the Azores Rua Capitão João d´Ávila, Pico da Urze 9700-042Angra do Heroísmo, AzoresPortugal
| | - Lucas Lamelas-López
- cE3c- Centre for Ecology, Evolution and Environmental Changes/Azorean Biodiversity Group, CHANGE – Global Change and Sustainability Institute, School of Agricultural and Environmental Sciences, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042, Angra do Heroísmo, Azores, PortugalcE3c- Centre for Ecology, Evolution and Environmental Changes/Azorean Biodiversity Group, CHANGE – Global Change and Sustainability Institute, School of Agricultural and Environmental Sciences, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042Angra do Heroísmo, AzoresPortugal
| | - Rui B. Elias
- cE3c- Centre for Ecology, Evolution and Environmental Changes/Azorean Biodiversity Group, CHANGE – Global Change and Sustainability Institute, School of Agricultural and Environmental Sciences, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042, Angra do Heroísmo, Azores, PortugalcE3c- Centre for Ecology, Evolution and Environmental Changes/Azorean Biodiversity Group, CHANGE – Global Change and Sustainability Institute, School of Agricultural and Environmental Sciences, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042Angra do Heroísmo, AzoresPortugal
| | - Rosalina Gabriel
- cE3c- Centre for Ecology, Evolution and Environmental Changes/Azorean Biodiversity Group, CHANGE – Global Change and Sustainability Institute, School of Agricultural and Environmental Sciences, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042, Angra do Heroísmo, Azores, PortugalcE3c- Centre for Ecology, Evolution and Environmental Changes/Azorean Biodiversity Group, CHANGE – Global Change and Sustainability Institute, School of Agricultural and Environmental Sciences, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042Angra do Heroísmo, AzoresPortugal
| | - Paulo A. V. Borges
- cE3c- Centre for Ecology, Evolution and Environmental Changes/Azorean Biodiversity Group, CHANGE – Global Change and Sustainability Institute, School of Agricultural and Environmental Sciences, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042, Angra do Heroísmo, Azores, PortugalcE3c- Centre for Ecology, Evolution and Environmental Changes/Azorean Biodiversity Group, CHANGE – Global Change and Sustainability Institute, School of Agricultural and Environmental Sciences, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042Angra do Heroísmo, AzoresPortugal
- IUCN SSC Atlantic Islands Invertebrate Specialist Group, 9700-042, Angra do Heroísmo, Azores, PortugalIUCN SSC Atlantic Islands Invertebrate Specialist Group, 9700-042Angra do Heroísmo, AzoresPortugal
- IUCN SSC Species Monitoring Specialist Group, 9700-042, Angra do Heroísmo, Azores, PortugalIUCN SSC Species Monitoring Specialist Group, 9700-042Angra do Heroísmo, AzoresPortugal
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de Melo-Ximenes AA, Corvalán LCJ, Carvalho LR, Mangini TA, Sobreiro MB, Vieira LD, Dias RDO, Silva CDME, Telles MPDC, Nunes R. Mitochondrion genomes of seven species of the endangered genus Sporophila (Passeriformes: Thraupidae). Genet Mol Biol 2024; 47:e20230172. [PMID: 38578013 PMCID: PMC10995768 DOI: 10.1590/1678-4685-gmb-2023-0172] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2023] [Accepted: 12/23/2023] [Indexed: 04/06/2024] Open
Abstract
We announce the mitochondrial genomes of seven species of the genus Sporophila (S. bouvreuil, S. iberaensis, S. melanogaster, S. minuta, S. nigrorufa, S. pileata, and S. ruficollis) which were validated by comparative genomic and phylogenetic analysis with related species. The mitochondrial genomes of seven passerines of the genus Sporophila were assembled (three complete and four nearly complete genomes) and were validated by reconstructing phylogenetic relations within Thraupidae. The complete mitogenomes ranged from 16,781 bp in S. ruficollis to 16,791 bp in S. minuta. We identified a conserved genome composition within all mitogenomes with 13 protein-coding genes, 22 tRNAs and two rRNAs. We observed a bias in the nucleotide composition and six mutational hotspots in Sporophila mitogenomes. Our mitogenome-based phylogenetic tree has S. minuta, S. maximiliani and S. nigricollis as sister species of the remaining species in the genus. We present new mitogenome sequences for seven Sporophila species, providing new genomic resources that may be useful for research on the evolution, comparative genetics, and conservation of this threatened group.
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Affiliation(s)
- Amanda Alves de Melo-Ximenes
- Universidade Federal de Goiás, Instituto de Ciências Biológicas
(ICB), Laboratório de Genética & Biodiversidade (LGBio), Goiânia, GO,
Brazil
- Universidade Federal de Goiás, Instituto de Ciências Biológicas
(ICB), Programa de Pós-Graduação em Genética e Biologia Molecular, Goiânia, GO,
Brazil
| | - Leonardo Carlos Jeronimo Corvalán
- Universidade Federal de Goiás, Instituto de Ciências Biológicas
(ICB), Laboratório de Genética & Biodiversidade (LGBio), Goiânia, GO,
Brazil
- Universidade Federal de Goiás, Instituto de Ciências Biológicas
(ICB), Programa de Pós-Graduação em Genética e Biologia Molecular, Goiânia, GO,
Brazil
- Universidade Estadual de Goiás, Instituto Acadêmico de Ciências da
Saúde e Biológicas (IACSB), Laboratório de Bioinformática e Biodiversidade (LBB),
Campus Oeste, Unidade Universitária de Iporá, Iporá, GO, Brazil
| | - Larissa Resende Carvalho
- Universidade Federal de Goiás, Instituto de Ciências Biológicas
(ICB), Laboratório de Genética & Biodiversidade (LGBio), Goiânia, GO,
Brazil
- Universidade Federal de Goiás, Instituto de Ciências Biológicas
(ICB), Programa de Pós-Graduação em Genética e Biologia Molecular, Goiânia, GO,
Brazil
- Universidade Estadual de Goiás, Instituto Acadêmico de Ciências da
Saúde e Biológicas (IACSB), Laboratório de Bioinformática e Biodiversidade (LBB),
Campus Oeste, Unidade Universitária de Iporá, Iporá, GO, Brazil
| | - Thalita Alves Mangini
- Universidade Federal de Goiás, Instituto de Ciências Biológicas
(ICB), Laboratório de Genética & Biodiversidade (LGBio), Goiânia, GO,
Brazil
| | - Mariane Brom Sobreiro
- Universidade Federal de Goiás, Instituto de Ciências Biológicas
(ICB), Laboratório de Genética & Biodiversidade (LGBio), Goiânia, GO,
Brazil
| | | | - Renata de Oliveira Dias
- Universidade Federal de Goiás, Instituto de Ciências Biológicas
(ICB), Laboratório de Genética & Biodiversidade (LGBio), Goiânia, GO,
Brazil
- Universidade Estadual de Goiás, Instituto Acadêmico de Ciências da
Saúde e Biológicas (IACSB), Laboratório de Bioinformática e Biodiversidade (LBB),
Campus Oeste, Unidade Universitária de Iporá, Iporá, GO, Brazil
| | - Carlos de Melo e Silva
- Universidade Estadual de Goiás, Instituto Acadêmico de Ciências da
Saúde e Biológicas (IACSB), Laboratório de Bioinformática e Biodiversidade (LBB),
Campus Oeste, Unidade Universitária de Iporá, Iporá, GO, Brazil
- Instituto Federal de Goiás, Goiás, GO, Brazil
| | - Mariana Pires de Campos Telles
- Universidade Federal de Goiás, Instituto de Ciências Biológicas
(ICB), Laboratório de Genética & Biodiversidade (LGBio), Goiânia, GO,
Brazil
- Pontifícia Universidade Católica de Goiás, Escola de Ciências
Médicas e da Vida, Goiânia, GO, Brazil
| | - Rhewter Nunes
- Universidade Federal de Goiás, Instituto de Ciências Biológicas
(ICB), Laboratório de Genética & Biodiversidade (LGBio), Goiânia, GO,
Brazil
- Universidade Estadual de Goiás, Instituto Acadêmico de Ciências da
Saúde e Biológicas (IACSB), Laboratório de Bioinformática e Biodiversidade (LBB),
Campus Oeste, Unidade Universitária de Iporá, Iporá, GO, Brazil
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Nilsson J, Eriksson P, Naguib MM, Jax E, Sihlbom C, Olsson BM, Lundkvist Å, Olsen B, Järhult JD, Larson G, Ellström P. Expression of influenza A virus glycan receptor candidates in mallard, chicken, and tufted duck. Glycobiology 2024; 34:cwad098. [PMID: 38127648 PMCID: PMC10987293 DOI: 10.1093/glycob/cwad098] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2023] [Revised: 11/09/2023] [Accepted: 11/28/2023] [Indexed: 12/23/2023] Open
Abstract
Influenza A virus (IAV) pandemics result from interspecies transmission events within the avian reservoir and further into mammals including humans. Receptor incompatibility due to differently expressed glycan structures between species has been suggested to limit zoonotic IAV transmission from the wild bird reservoir as well as between different bird species. Using glycoproteomics, we have studied the repertoires of expressed glycan structures with focus on putative sialic acid-containing glycan receptors for IAV in mallard, chicken and tufted duck; three bird species with different roles in the zoonotic ecology of IAV. The methodology used pinpoints specific glycan structures to specific glycosylation sites of identified glycoproteins and was also used to successfully discriminate α2-3- from α2-6-linked terminal sialic acids by careful analysis of oxonium ions released from glycopeptides in tandem MS/MS (MS2), and MS/MS/MS (MS3). Our analysis clearly demonstrated that all three bird species can produce complex N-glycans including α2-3-linked sialyl Lewis structures, as well as both N- and O- glycans terminated with both α2-3- and α2-6-linked Neu5Ac. We also found the recently identified putative IAV receptor structures, Man-6P N-glycopeptides, in all tissues of the three bird species. Furthermore, we found many similarities in the repertoires of expressed receptors both between the bird species investigated and to previously published data from pigs and humans. Our findings of sialylated glycan structures, previously anticipated to be mammalian specific, in all three bird species may have major implications for our understanding of the role of receptor incompatibility in interspecies transmission of IAV.
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Affiliation(s)
- Jonas Nilsson
- Department of Laboratory Medicine, University of Gothenburg, Sahlgrenska University Hospital, Vita Stråket 12, Gothenburg SE-413 45, Sweden
- Laboratory of Clinical Chemistry, Sahlgrenska University Hospital, Bruna Stråket 16, Gothenburg SE-413 45, Sweden
- Proteomics Core Facility, University of Gothenburg, Sahlgrenska Academy, Medicinaregatan 9E, Gothenburg SE-405 30, Sweden
| | - Per Eriksson
- Zoonosis Science Center, Department of Medical Sciences, Husargatan 3, Uppsala University, Uppsala, SE-75185, Sweden
| | - Mahmoud M Naguib
- Zoonosis Science Center, Department of Medical Biochemistry and Microbiology, Husargatan 3, Uppsala University, Uppsala, SE-75237, Sweden
| | - Elinor Jax
- Department of Migration, Max Planck Institute of Animal Behavior, Am Obstberg 1, Radolfzell, Baden-Württemberg DE-78315, Germany
| | - Carina Sihlbom
- Proteomics Core Facility, University of Gothenburg, Sahlgrenska Academy, Medicinaregatan 9E, Gothenburg SE-405 30, Sweden
| | - Britt-Marie Olsson
- Proteomics Core Facility, University of Gothenburg, Sahlgrenska Academy, Medicinaregatan 9E, Gothenburg SE-405 30, Sweden
| | - Åke Lundkvist
- Zoonosis Science Center, Department of Medical Biochemistry and Microbiology, Husargatan 3, Uppsala University, Uppsala, SE-75237, Sweden
| | - Björn Olsen
- Zoonosis Science Center, Department of Medical Sciences, Husargatan 3, Uppsala University, Uppsala, SE-75185, Sweden
| | - Josef D Järhult
- Zoonosis Science Center, Department of Medical Sciences, Husargatan 3, Uppsala University, Uppsala, SE-75185, Sweden
| | - Göran Larson
- Department of Laboratory Medicine, University of Gothenburg, Sahlgrenska University Hospital, Vita Stråket 12, Gothenburg SE-413 45, Sweden
- Laboratory of Clinical Chemistry, Sahlgrenska University Hospital, Bruna Stråket 16, Gothenburg SE-413 45, Sweden
| | - Patrik Ellström
- Zoonosis Science Center, Department of Medical Sciences, Husargatan 3, Uppsala University, Uppsala, SE-75185, Sweden
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10
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Nicolaï MPJ, Debruyn G, Soenens M, Shawkey MD, D’Alba L. Nanoscale millefeuilles produce iridescent bill ornaments in birds. PNAS Nexus 2024; 3:pgae138. [PMID: 38638835 PMCID: PMC11026107 DOI: 10.1093/pnasnexus/pgae138] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/10/2024] [Accepted: 03/25/2024] [Indexed: 04/20/2024]
Abstract
Colors are well studied in bird plumage but not in other integumentary structures. In particular, iridescent colors from structures other than plumage are undescribed in birds. Here, we show that a multilayer of keratin and lipids is sufficient to produce the iridescent bill of Spermophaga haematina. Furthermore, that the male bill is presented to the female under different angles during display provides support for the hypothesis that iridescence evolved in response to sexual selection. This is the first report of an iridescent bill, and only the second instance of iridescence in birds in which melanosomes are not involved. Furthermore, an investigation of museum specimens of an additional 98 species, showed that this evolved once, possibly twice. These results are promising, as they suggest that birds utilize a wider array of physical phenomena to produce coloration and should further stimulate research on nonplumage integumentary colors.
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Affiliation(s)
- Michaël P J Nicolaï
- Department of Biology, Evolution and Optics of Nanostructures Group, University of Ghent, Ledeganckstraat 35, 9000 Gent, Belgium
- Department of Recent Vertebrates, Royal Belgian Institute of Natural Sciences, Vautierstraat 29, 1050 Brussels, Belgium
- Museum of Comparative Zoology, Harvard University, Cambridge, MA 02138, USA
| | - Gerben Debruyn
- Department of Biology, Evolution and Optics of Nanostructures Group, University of Ghent, Ledeganckstraat 35, 9000 Gent, Belgium
| | - Mieke Soenens
- Department of Biology, Evolution and Optics of Nanostructures Group, University of Ghent, Ledeganckstraat 35, 9000 Gent, Belgium
| | - Matthew D Shawkey
- Department of Biology, Evolution and Optics of Nanostructures Group, University of Ghent, Ledeganckstraat 35, 9000 Gent, Belgium
| | - Liliana D’Alba
- Department of Biology, Evolution and Optics of Nanostructures Group, University of Ghent, Ledeganckstraat 35, 9000 Gent, Belgium
- Naturalis Biodiversity Center, Darwinweg 2, 2333 CR Leiden, The Netherlands
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11
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Matthews AE. Empirically tuned theory reveals why symbiont abundance 'mite' vary across hosts. J Anim Ecol 2024; 93:373-376. [PMID: 38351463 DOI: 10.1111/1365-2656.14057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2024] [Accepted: 01/28/2024] [Indexed: 04/04/2024]
Abstract
Research Highlight: del Mar Labrador, M., Serrano, D., Doña, J., Aguilera, E., Arroyo, J. L., Atiénzar, F., Barba, E., Bermejo, A., Blanco, G., Borràs, A., Calleja, J. A., Cantó, J. L., Cortés, V., de la Puente, J., de Palacio, D., Fernández-González, S., Figuerola, J., Frías, Ó., Fuertes-Marcos, B. Garamszegi, L. Z., Gordo, Ó., Gurpegui, M., Kovács, I., Martínez, J. L., Meléndez, L., Mestre, A., Møller, A. P., Monrós, J. S., Moreno-Opo, R., Navarro, C., Pap, P. L., Pérez-Tris, J., Piculo, R., Ponce, C., Proctor, H., Rodríguez, R., Sallent, Á., Senar, J., Tella, J. L., Vágási, C. I., Vögeli, M., & Jovani, R. (2023). Host space, not energy or symbiont size, constrains feather mite abundance across passerine bird species. Journal of Animal Ecology, https://doi.org/10.1111/1365-2656.14032. Symbionts represent crucial links between species in ecosystems. Consequently, understanding their patterns of abundance is a major goal in the study of symbioses. However, multiple biotic and abiotic factors may regulate symbionts, and disentangling the mechanisms that drive variation in their abundance across host species is challenging. One promising strategy to approach this challenge is to incorporate biologically relevant data into theoretical models. In a recent study, Labrador et al. (2023) used this strategy to investigate the poorly understood symbiosis between feather mites and their avian hosts. They integrate a remarkable amount of empirical data with models based on the metabolic theory of ecology to determine what factors limit feather mite abundance across European passerines. Their quantitative analyses indicate that the number of feather barbs limits mite abundance across host species, suggesting that mite populations are spatially, but not energetically, constrained. These findings not only reveal mechanisms that may drive the variation in feather mite abundances across hosts, but also advance our understanding of the ecology of interspecific interactions more generally.
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Affiliation(s)
- Alix E Matthews
- College of Sciences and Mathematics and Molecular Biosciences Program, Arkansas State University, Jonesboro, Arkansas, USA
- Department of Biological Sciences, Arkansas State University, Jonesboro, Arkansas, USA
- Department of Biology, Rhodes College, Memphis, Tennessee, USA
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12
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Johnson FA, Eraud C, Francesiaz C, Zimmerman GS, Koneff MD. Using the R package popharvest to assess the sustainability of offtake in birds. Ecol Evol 2024; 14:e11059. [PMID: 38571795 PMCID: PMC10985383 DOI: 10.1002/ece3.11059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Revised: 01/14/2024] [Accepted: 02/05/2024] [Indexed: 04/05/2024] Open
Abstract
The R package popharvest was designed to help assess the sustainability of offtake in birds when only limited demographic information is available. In this article, we describe some basics of harvest theory and then discuss several considerations when using the different approaches in popharvest to assess whether observed harvests are unsustainable. Throughout, we emphasize the importance of distinguishing between the scientific and policy aspects of managing offtake. The principal product of popharvest is a sustainable harvest index (SHI), which can indicate whether the harvest is unsustainable but not the converse. SHI is estimated based on a simple, scalar model of logistic population growth, whose parameters may be estimated using limited knowledge of demography. Uncertainty in demography leads to a distribution of SHI values and it is the purview of the decision-maker to determine what amounts to an acceptable risk when failing to reject the null hypothesis of sustainability. The attitude toward risk, in turn, will likely depend on the decision-maker's objective(s) in managing offtake. The management objective as specified in popharvest is a social construct, informed by biology, but ultimately it is an expression of social values that usually vary among stakeholders. We therefore suggest that any standardization of criteria for management objectives in popharvest will necessarily be subjective and, thus, hard to defend in diverse decision-making situations. Because of its ease of use, diverse functionalities, and a minimal requirement of demographic information, we expect the use of popharvest to become widespread. Nonetheless, we suggest that while popharvest provides a useful platform for rapid assessments of sustainability, it cannot substitute for sufficient expertise and experience in harvest theory and management.
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Affiliation(s)
| | - Cyril Eraud
- Office Français de la Biodiversité, Direction de la Recherche et de l'Appui Scientifique, Service Conservation et Gestion des Espèces à EnjeuxVilliers‐en‐BoisFrance
| | - Charlotte Francesiaz
- Office Français de la Biodiversité, Direction de la Recherche et de l'Appui Scientifique, Service Conservation et Gestion des Espèces ExploitéesJuvignacFrance
| | - Guthrie S. Zimmerman
- Division of Migratory Bird ManagementU.S. Fish and Wildlife ServiceSacramentoCaliforniaUSA
| | - Mark D. Koneff
- Division of Migratory Bird ManagementU.S. Fish and Wildlife ServiceOronoMaineUSA
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13
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Fröhlich A, Ducatez S, Němec P, Sol Rueda D. Light conditions and the evolution of the visual system in birds. Evolution 2024:qpae054. [PMID: 38558240 DOI: 10.1093/evolut/qpae054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2023] [Indexed: 04/04/2024]
Abstract
Despite vision is an essential sense for many animals, the intuitively appealing notion that the visual system has been shaped by environmental light conditions is backed by insufficient evidence. Based on a comprehensive phylogenetic comparative analysis of birds, we investigate if exposure to different light conditions might have triggered evolutionary divergence in the visual system through pressures on light sensitivity, visual acuity, and neural processing capacity. Our analyses suggest that birds that have adopted nocturnal habits evolved eyes with larger corneal diameters and, to a lesser extent, longer axial length than diurnal species. However, we found no evidence that sensing and processing organs were selected together, as observed in diurnal birds. Rather than enlarging the processing centers, we found a tendency among nocturnal species to either reduce or maintain the size of the two main brain centers involved in vision -the optic tectum and the wulst. These results suggest a mosaic pattern of evolution, wherein optimization of the eye optics for efficient light capture in nocturnal species may have compromised visual acuity and central processing capacity.
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Affiliation(s)
- Arkadiusz Fröhlich
- Faculty of Forestry, University of Agriculture in Kraków, al. 29 Listopada 46, Kraków 31-425, Poland
- Institute of Nature Conservation, Polish Academy of Sciences, al. Mickiewicza 33, Kraków 31-120, Poland
| | - Simon Ducatez
- Institut de Recherche pour le Développement, UMR 241 EIO -Ecosystèmes Insulaires Océaniens (IFREMER, ILM, IRD, UPF), Campus d'Outumaoro, 98702 Faa'a, Tahiti, French Polynesia
| | - Pavel Němec
- Department of Zoology, Faculty of Science, Charles University, CZ-12844 Prague, Czech Republic
| | - Daniel Sol Rueda
- Centre for Ecological Research and Forestry Applications (CREAF), Spanish National Research Council (CSIC), Bellaterra, Catalonia E-08193, Spain
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14
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Sheppard EC, Martin CA, Armstrong C, González-Quevedo C, Illera JC, Suh A, Spurgin LG, Richardson DS. Genotype-environment associations reveal genes potentially linked to avian malaria infection in populations of an endemic island bird. Mol Ecol 2024; 33:e17329. [PMID: 38533805 DOI: 10.1111/mec.17329] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2023] [Revised: 01/29/2024] [Accepted: 03/01/2024] [Indexed: 03/28/2024]
Abstract
Patterns of pathogen prevalence are, at least partially, the result of coevolutionary host-pathogen interactions. Thus, exploring the distribution of host genetic variation in relation to infection by a pathogen within and across populations can provide important insights into mechanisms of host defence and adaptation. Here, we use a landscape genomics approach (Bayenv) in conjunction with genome-wide data (ddRADseq) to test for associations between avian malaria (Plasmodium) prevalence and host genetic variation across 13 populations of the island endemic Berthelot's pipit (Anthus berthelotii). Considerable and consistent spatial heterogeneity in malaria prevalence was observed among populations over a period of 15 years. The prevalence of malaria infection was also strongly positively correlated with pox (Avipoxvirus) prevalence. Multiple host loci showed significant associations with malaria prevalence after controlling for genome-wide neutral genetic structure. These sites were located near to or within genes linked to metabolism, stress response, transcriptional regulation, complement activity and the inflammatory response, many previously implicated in vertebrate responses to malarial infection. Our findings identify diverse genes - not just limited to the immune system - that may be involved in host protection against malaria and suggest that spatially variable pathogen pressure may be an important evolutionary driver of genetic divergence among wild animal populations, such as Berthelot's pipit. Furthermore, our data indicate that spatio-temporal variation in multiple different pathogens (e.g. malaria and pox in this case) may have to be studied together to develop a more holistic understanding of host pathogen-mediated evolution.
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Affiliation(s)
| | - Claudia A Martin
- School of Biological Sciences, University of East Anglia, Norfolk, UK
- Terrestrial Ecology Unit, Biology Department, Ghent University, Ghent, Belgium
| | - Claire Armstrong
- School of Biological Sciences, University of East Anglia, Norfolk, UK
| | - Catalina González-Quevedo
- School of Biological Sciences, University of East Anglia, Norfolk, UK
- Grupo Ecología y Evolución de Vertebrados, Instituto de Biología, Facultad de Ciencias Exactas y Naturales, Universidad de Antioquia UdeA, Medellin, Colombia
| | - Juan Carlos Illera
- Biodiversity Research Institute (CSIC-Oviedo, University-Principality of Asturias), University of Oviedo, Mieres, Asturias, Spain
| | - Alexander Suh
- School of Biological Sciences, University of East Anglia, Norfolk, UK
- Centre for Molecular Biodiversity Research, Leibniz Institute for the Analysis of Biodiversity Change, Bonn, Germany
- Department of Organismal Biology - Systematic Biology, Evolutionary Biology Centre, Science for Life Laboratory, Uppsala University, Uppsala, Sweden
| | - Lewis G Spurgin
- School of Biological Sciences, University of East Anglia, Norfolk, UK
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15
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van Hasselt SJ, Coscia M, Allocca G, Vyssotski AL, Meerlo P. Sleep and Thermoregulation in Birds: Cold Exposure Reduces Brain Temperature but Has Little Influence on Sleep Time and Sleep Architecture in Jackdaws ( Coloeus monedula). Biology (Basel) 2024; 13:229. [PMID: 38666841 DOI: 10.3390/biology13040229] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2024] [Revised: 03/25/2024] [Accepted: 03/27/2024] [Indexed: 04/28/2024]
Abstract
Birds have an electrophysiological sleep state that resembles mammalian rapid-eye-movement (REM) sleep. However, whether its regulation and function are similar is unclear. In the current experiment, we studied REM sleep regulation in jackdaws (Coloeus monedula) by exposing the birds to low ambient temperature, a procedure that selectively suppresses REM sleep in mammals. Eight jackdaws were equipped with electrodes to record brain activity and neck muscle activity and a thermistor to record cortical brain temperature. Recordings covered a three-day period starting with a 24 h baseline day at an ambient temperature of 21 °C, followed by a 12 h cold night at 4 °C, after which the ambient temperature was restored to 21 °C for the remaining recovery period. Cold exposure at night caused a significant drop in brain temperature of 1.4 °C compared to the baseline night. However, throughout the cold night, jackdaws expressed NREM sleep and REM sleep levels that were not significantly different from the baseline. Also, EEG spectral power during NREM sleep was unaffected by cold exposure. Thus, while cold exposure had a clear effect on brain temperature in jackdaws, it did not have the same REM sleep suppressing effect reported for mammals. These findings suggest that the REM-sleep-like state in birds, unlike REM sleep in mammals, is protected against the influence of low temperature.
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Affiliation(s)
- Sjoerd J van Hasselt
- Groningen Institute for Evolutionary Life Sciences, University of Groningen, 9747 AG Groningen, The Netherlands
| | - Massimiliano Coscia
- Groningen Institute for Evolutionary Life Sciences, University of Groningen, 9747 AG Groningen, The Netherlands
| | - Giancarlo Allocca
- School of Biomedical Sciences, University of Melbourne, Parkville, VIC 3010, Australia
- Somnivore Pty. Ltd., Bachhus Marsh, VIC 3340, Australia
| | - Alexei L Vyssotski
- Institute of Neuroinformatics, University of Zurich and Swiss Federal Institute of Technology (ETH), 8057 Zurich, Switzerland
| | - Peter Meerlo
- Groningen Institute for Evolutionary Life Sciences, University of Groningen, 9747 AG Groningen, The Netherlands
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16
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Alaasam VJ, Behnke TL, Grant AR, Ouyang JQ. Glucocorticoids and land cover: a largescale comparative approach to assess a physiological biomarker for avian conservation. Philos Trans R Soc Lond B Biol Sci 2024; 379:20220508. [PMID: 38310940 PMCID: PMC10838646 DOI: 10.1098/rstb.2022.0508] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2023] [Accepted: 10/19/2023] [Indexed: 02/06/2024] Open
Abstract
As humans alter landscapes worldwide, land and wildlife managers need reliable tools to assess and monitor responses of wildlife populations. Glucocorticoid (GC) hormone levels are one common physiological metric used to quantify how populations are coping in the context of their environments. Understanding whether GC levels can reflect broad landscape characteristics, using data that are free and commonplace to diverse stakeholders, is an important step towards physiological biomarkers having practical application in management and conservation. We conducted a phylogenetic comparative analysis using publicly available datasets to test the efficacy of GCs as a biomarker for large spatial-scale avian population monitoring. We used hormone data from HormoneBase (51 species), natural history information and US national land cover data to determine if baseline or stress-induced corticosterone varies with the amount of usable land cover types within each species' home range. We found that stress-induced levels, but not baseline, positively correlated with per cent usable land cover both within and across species. Our results indicate that GC concentrations may be a useful biomarker for characterizing populations across a range of habitat availability, and we advocate for more physiological studies on non-traditional species in less studied populations to build on this framework. This article is part of the theme issue 'Endocrine responses to environmental variation: conceptual approaches and recent developments'.
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Affiliation(s)
| | - Tessa L. Behnke
- Department of Natural Resources and Environmental Science, University of Nevada, Reno, NV 89557, USA
| | - Avery R. Grant
- Department of Biology, University of Nevada, Reno, NV 89557, USA
| | - Jenny Q. Ouyang
- Department of Biology, University of Nevada, Reno, NV 89557, USA
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17
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Bolton PE, Ryder TB, Dakin R, Houtz JL, Moore IT, Balakrishnan CN, Horton BM. Neurogenomic landscape associated with status-dependent cooperative behaviour. Mol Ecol 2024:e17327. [PMID: 38511765 DOI: 10.1111/mec.17327] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2023] [Revised: 01/04/2024] [Accepted: 03/07/2024] [Indexed: 03/22/2024]
Abstract
The neurogenomic mechanisms mediating male-male reproductive cooperative behaviours remain unknown. We leveraged extensive transcriptomic and behavioural data on a neotropical bird species (Pipra filicauda) that performs cooperative courtship displays to understand these mechanisms. In this species, the cooperative display is modulated by testosterone, which promotes cooperation in non-territorial birds, but suppresses cooperation in territory holders. We sought to understand the neurogenomic underpinnings of three related traits: social status, cooperative display behaviour and testosterone phenotype. To do this, we profiled gene expression in 10 brain nuclei spanning the social decision-making network (SDMN), and two key endocrine tissues that regulate social behaviour. We associated gene expression with each bird's behavioural and endocrine profile derived from 3 years of repeated measures taken from free-living birds in the Ecuadorian Amazon. We found distinct landscapes of constitutive gene expression were associated with social status, testosterone phenotype and cooperation, reflecting the modular organization and engagement of neuroendocrine tissues. Sex-steroid and neuropeptide signalling appeared to be important in mediating status-specific relationships between testosterone and cooperation, suggesting shared regulatory mechanisms with male aggressive and sexual behaviours. We also identified differentially regulated genes involved in cellular activity and synaptic potentiation, suggesting multiple mechanisms underpin these genomic states. Finally, we identified SDMN-wide gene expression differences between territorial and floater males that could form the basis of 'status-specific' neurophysiological phenotypes, potentially mediated by testosterone and growth hormone. Overall, our findings provide new, systems-level insights into the mechanisms of cooperative behaviour and suggest that differences in neurogenomic state are the basis for individual differences in social behaviour.
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Affiliation(s)
- Peri E Bolton
- Department of Biology, East Carolina University, Greenville, North Carolina, USA
- Department of Vertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington, District of Columbia, USA
| | - T Brandt Ryder
- Migratory Bird Center, Smithsonian National Zoological Park, Washington, District of Columbia, USA
- Bird Conservancy of the Rockies, Fort Collins, Colorado, USA
| | - Roslyn Dakin
- Migratory Bird Center, Smithsonian National Zoological Park, Washington, District of Columbia, USA
- Department of Biology, Carleton University, Ottawa, Ontario, Canada
| | - Jennifer L Houtz
- Department of Biology, Millersville University, Millersville, Pennsylvania, USA
- Department of Biology, Allegheny College, Meadville, Pennsylvania, USA
| | - Ignacio T Moore
- Department of Biological Sciences, Virginia Tech, Blacksburg, Virginia, USA
| | | | - Brent M Horton
- Department of Biology, Millersville University, Millersville, Pennsylvania, USA
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18
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Freeman MT, Coulson B, Short JC, Ngcamphalala CA, Makola MO, McKechnie AE. Evolution of avian heat tolerance: The role of atmospheric humidity. Ecology 2024:e4279. [PMID: 38501232 DOI: 10.1002/ecy.4279] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/14/2023] [Revised: 11/12/2023] [Accepted: 01/19/2024] [Indexed: 03/20/2024]
Abstract
The role of atmospheric humidity in the evolution of endotherms' thermoregulatory performance remains largely unexplored, despite the fact that elevated humidity is known to impede evaporative cooling capacity. Using a phylogenetically informed comparative framework, we tested the hypothesis that pronounced hyperthermia tolerance among birds occupying humid lowlands evolved to reduce the impact of humidity-impeded scope for evaporative heat dissipation by comparing heat tolerance limits (HTLs; maximum tolerable air temperature), maximum body temperatures (Tb max), and associated thermoregulatory variables in humid (19.2 g H2 O m-3 ) versus dry (1.1 g H2 O m-3 ) air among 30 species from three climatically distinct sites (arid, mesic montane, and humid lowland). Humidity-associated decreases in evaporative water loss and resting metabolic rate were 27%-38% and 21%-27%, respectively, and did not differ significantly between sites. Decreases in HTLs were significantly larger among arid-zone (mean ± SD = 3.13 ± 1.12°C) and montane species (2.44 ± 1.0°C) compared to lowland species (1.23 ± 1.34°C), with more pronounced hyperthermia among lowland (Tb max = 46.26 ± 0.48°C) and montane birds (Tb max = 46.19 ± 0.92°C) compared to arid-zone species (45.23 ± 0.24°C). Our findings reveal a functional link between facultative hyperthermia and humidity-related constraints on evaporative cooling, providing novel insights into how hygric and thermal environments interact to constrain avian performance during hot weather. Moreover, the macrophysiological patterns we report provide further support for the concept of a continuum from thermal specialization to thermal generalization among endotherms, with adaptive variation in body temperature correlated with prevailing climatic conditions.
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Affiliation(s)
- Marc T Freeman
- South African Research Chair in Conservation Physiology, South African National Biodiversity Institute, Pretoria, South Africa
- DSI-NRF Centre of Excellence at the FitzPatrick Institute, Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
| | - Bianca Coulson
- South African Research Chair in Conservation Physiology, South African National Biodiversity Institute, Pretoria, South Africa
- DSI-NRF Centre of Excellence at the FitzPatrick Institute, Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
| | - James C Short
- South African Research Chair in Conservation Physiology, South African National Biodiversity Institute, Pretoria, South Africa
- DSI-NRF Centre of Excellence at the FitzPatrick Institute, Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
| | - Celiwe A Ngcamphalala
- Department of Biological Sciences, University of Cape Town, Rondebosch, South Africa
| | - Mathome O Makola
- South African Research Chair in Conservation Physiology, South African National Biodiversity Institute, Pretoria, South Africa
- DSI-NRF Centre of Excellence at the FitzPatrick Institute, Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
| | - Andrew E McKechnie
- South African Research Chair in Conservation Physiology, South African National Biodiversity Institute, Pretoria, South Africa
- DSI-NRF Centre of Excellence at the FitzPatrick Institute, Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
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19
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Bensch S, Duc M, Valkiūnas G. Brain parasites and misorientation of migratory birds. Trends Parasitol 2024:S1471-4922(24)00033-3. [PMID: 38443303 DOI: 10.1016/j.pt.2024.02.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2024] [Revised: 02/19/2024] [Accepted: 02/20/2024] [Indexed: 03/07/2024]
Abstract
Haemoproteus blood parasites of birds are thought to be relatively benign. Recent findings show that infections may develop in the brain of birds, possibly distorting their orientation sense. Misdirected migration may lead migrants outside their range where they are recognized as vagrants and can transmit parasites to novel hosts.
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Affiliation(s)
| | - Mélanie Duc
- Nature Research Centre, Akademijos 2, 08412 Vilnius, Lithuania
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20
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Wang S. Divergent island hybrids mixed waves of ancient gene flow. Mol Ecol 2024; 33:e17279. [PMID: 38308460 DOI: 10.1111/mec.17279] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2023] [Revised: 12/27/2023] [Accepted: 01/12/2024] [Indexed: 02/04/2024]
Abstract
In this issue of Molecular Ecology, Salter et al. (2023) discovered that the Cuban Northern Bobwhite subspecies, Colinus virginianus cubanensis (Gould, 1850), is an ancient hybrid population formed due to historical hybridization potentially brought by waves of historical human migration. This study revealed a complex mixture of gene flow from distinct spatiotemporal origins underlying a seemingly semi-independent evolutionary trajectory. Hybridization can be more common and complex than we thought.
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Affiliation(s)
- Silu Wang
- Department of Biological Sciences, State University of New York at Buffalo, Buffalo, New York, USA
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21
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Bean TG, Chadwick EA, Herrero-Villar M, Mateo R, Naidoo V, Rattner BA. Do Pharmaceuticals in the Environment Pose a Risk to Wildlife? Environ Toxicol Chem 2024; 43:595-610. [PMID: 36398854 DOI: 10.1002/etc.5528] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2022] [Revised: 08/29/2022] [Accepted: 11/14/2022] [Indexed: 06/16/2023]
Abstract
The vast majority of knowledge related to the question "To what extent do pharmaceuticals in the environment pose a risk to wildlife?" stems from the Asian vulture crisis (>99% decline of some species of Old World vultures on the Indian subcontinent related to the veterinary use of the nonsteroidal anti-inflammatory drug [NSAID] diclofenac). The hazard of diclofenac and other NSAIDs (carprofen, flunixin, ketoprofen, nimesulide, phenylbutazone) to vultures and other avian species has since been demonstrated; indeed, only meloxicam and tolfenamic acid have been found to be vulture-safe. Since diclofenac was approved for veterinary use in Spain and Italy in 2013 (home to ~95% of vultures in Europe), the risk of NSAIDs to vultures in these countries has become one of the principal concerns related to pharmaceuticals and wildlife. Many of the other bodies of work on pharmaceutical exposure, hazard and risk to wildlife also relate to adverse effects in birds (e.g., poisoning of scavenging birds in North America and Europe from animal carcasses containing pentobarbital, secondary and even tertiary poisoning of birds exposed to pesticides used in veterinary medicine as cattle dips, migratory birds as a vector for the transfer of antimicrobial and antifungal resistance). Although there is some research related to endocrine disruption in reptiles and potential exposure of aerial insectivores, there remain numerous knowledge gaps for risk posed by pharmaceuticals to amphibians, reptiles, and mammals. Developing noninvasive sampling techniques and new approach methodologies (e.g., genomic, in vitro, in silico, in ovo) is important if we are to bridge the current knowledge gaps without extensive vertebrate testing. Environ Toxicol Chem 2024;43:595-610. © 2022 The Authors. Environmental Toxicology and Chemistry published by Wiley Periodicals LLC on behalf of SETAC. This article has been contributed to by U.S. Government employees and their work is in the public domain in the USA.
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Affiliation(s)
| | | | - Marta Herrero-Villar
- Instituto de Investigación en Recursos Cinegéticos, Ciudad Real, Castilla-La-Mancha, Spain
| | - Rafael Mateo
- Instituto de Investigación en Recursos Cinegéticos, Ciudad Real, Castilla-La-Mancha, Spain
| | - Vinny Naidoo
- Department of Paraclinical Sciences, Faculty of Veterinary Science, University of Pretoria, Pretoria, Gauteng, South Africa
| | - Barnett A Rattner
- Eastern Ecological Science Center at the Patuxent Research Refuge, US Geological Survey, Laurel, Maryland, USA
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22
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Rudzki EN, Antonson ND, Jones TM, Schelsky WM, Trevelline BK, Hauber ME, Kohl KD. Host avian species and environmental conditions influence the microbial ecology of brood parasitic brown-headed cowbird nestlings: What rules the roost? Mol Ecol 2024; 33:e17289. [PMID: 38327124 DOI: 10.1111/mec.17289] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Revised: 01/17/2024] [Accepted: 01/23/2024] [Indexed: 02/09/2024]
Abstract
The role of species interactions, as well as genetic and environmental factors, all likely contribute to the composition and structure of the gut microbiome; however, disentangling these independent factors under field conditions represents a challenge for a functional understanding of gut microbial ecology. Avian brood parasites provide unique opportunities to investigate these questions, as brood parasitism results in parasite and host nestlings being raised in the same nest, by the same parents. Here we utilized obligate brood parasite brown-headed cowbird nestlings (BHCO; Molothrus ater) raised by several different host passerine species to better understand, via 16S rRNA sequencing, the microbial ecology of brood parasitism. First, we compared faecal microbial communities of prothonotary warbler nestlings (PROW; Protonotaria citrea) that were either parasitized or non-parasitized by BHCO and communities among BHCO nestlings from PROW nests. We found that parasitism by BHCO significantly altered both the community membership and community structure of the PROW nestling microbiota, perhaps due to the stressful nest environment generated by brood parasitism. In a second dataset, we compared faecal microbiotas from BHCO nestlings raised by six different host passerine species. Here, we found that the microbiota of BHCO nestlings was significantly influenced by the parental host species and the presence of an inter-specific nestmate. Thus, early rearing environment is important in determining the microbiota of brood parasite nestlings and their companion nestlings. Future work may aim to understand the functional effects of this microbiota variability on nestling performance and fitness.
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Affiliation(s)
- Elizabeth N Rudzki
- Department of Biological Sciences, Dietrich School of Arts and Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA
| | - Nicholas D Antonson
- Department of Evolution, Ecology, and Behavior, School of Integrative Biology, College of Liberal Arts & Sciences, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA
| | - Todd M Jones
- Department of Natural Resources and Environmental Sciences, College of Agricultural, Consumer and Environmental Sciences, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA
- Illinois Natural History Survey, Prairie Research Institute, University of Illinois at Urbana-Champaign, Champaign, Illinois, USA
| | - Wendy M Schelsky
- Department of Evolution, Ecology, and Behavior, School of Integrative Biology, College of Liberal Arts & Sciences, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA
- Department of Natural Resources and Environmental Sciences, College of Agricultural, Consumer and Environmental Sciences, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA
- Prairie Research Institute, Illinois Natural History Survey, University of Illinois, Champaign, Illinois, USA
| | - Brian K Trevelline
- Cornell Lab of Ornithology, Cornell University, Ithaca, New York, USA
- Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, New York, USA
| | - Mark E Hauber
- Department of Evolution, Ecology, and Behavior, School of Integrative Biology, College of Liberal Arts & Sciences, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA
- Illinois Natural History Survey, Prairie Research Institute, University of Illinois at Urbana-Champaign, Champaign, Illinois, USA
- Advanced Science Research Center and Program in Psychology, Graduate Center, City University of New York, New York, New York, USA
| | - Kevin D Kohl
- Department of Biological Sciences, Dietrich School of Arts and Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA
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23
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de Moraes KF, Lima MGM, Gonçalves GSR, Cerqueira PV, Santos MPD. The future of endemic and threatened birds of the Amazon in the face of global climate change. Ecol Evol 2024; 14:e11097. [PMID: 38500858 PMCID: PMC10945313 DOI: 10.1002/ece3.11097] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Revised: 02/14/2024] [Accepted: 02/19/2024] [Indexed: 03/20/2024] Open
Abstract
The anthropogenic impacts on the environment, including deforestation and the escalating emissions of greenhouse gases, have significantly contributed to global climate change that can lead to alterations in ecosystems. In this context, protected areas (PAs) are pillars for biodiversity conservation by being able, for example, to maintain the viability of populations of endangered species. On the other hand, the species range shifts do not follow the limits of PAs, jeopardizing the conservation of these species. Furthermore, the effectiveness of PAs is consistently undermined by impacts stemming from land use, hunting activities, and illegal exploitation, both within the designated areas and in their adjacent zones. The objectives of this study are to quantify the impacts of climate change on the distribution of threatened and endemic birds of the Amazon biome, evaluate the effectiveness of PAs in protecting the richness of threatened birds, and analyze the representativeness of species within PAs. We found with our results that climate suitability loss is above 80 for 65% of taxa in the optimistic scenario and above 93% in the pessimistic scenario. The results show that PAs are not effective in protecting the richness of Amazonian birds, just as they are ineffective in protecting most of the taxa studied when analyzed individually Although some taxa are presented as "Protected," in future scenarios these taxa may suffer major shrinkages in their distributions and consequently present population unviability. The loss of climatically suitable areas and the effectiveness of PAs can directly influence the loss of ecosystem services, fundamental to maintaining the balance of biodiversity. Therefore, our study paves the way for conservation actions aimed at these taxa so that they can mitigate current and future extinctions due to climate change.
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Affiliation(s)
- Kauê Felippe de Moraes
- Conservation Biogeography and Macroecology Laboratory – BIOMACROFederal University of ParáBelémBrazil
- Graduate Program in ZoologyFederal University of ParáBelémBrazil
| | | | | | - Pablo Vieira Cerqueira
- Conservation Biogeography and Macroecology Laboratory – BIOMACROFederal University of ParáBelémBrazil
| | - Marcos Pérsio Dantas Santos
- Conservation Biogeography and Macroecology Laboratory – BIOMACROFederal University of ParáBelémBrazil
- Graduate Program in ZoologyFederal University of ParáBelémBrazil
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24
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Pansarin ER. Nectar-mediated avian pollination in Cattleya (Orchidaceae: Laeliinae). Plant Biol (Stuttg) 2024; 26:181-187. [PMID: 38168075 DOI: 10.1111/plb.13606] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2023] [Accepted: 11/24/2023] [Indexed: 01/05/2024]
Abstract
Orchids are notable for the variety of rewards produced for their pollinators. Nevertheless, many species are rewardless and pollinated by food-deceptive strategies. This is the case for Cattleya, a Neotropical genus of more than 100 species supposedly pollinated by food-deception. Here, I studied a member of the clade Sophronitis (Cattleya cernua) in forest areas of southeastern Brazil. The study included analyses of floral morphology, light microscopy of secretory tissues, histochemistry of flower resources, and measurements of nectar volume and concentration. Data on pollinators and mechanisms of pollination were collected in the field by means of film records, while breeding systems were studied using experimental treatments applied to cultivated specimens. The flower traits of Cattleya cernua show strong adaptation to avian pollination. Flowers produce 1-7 μl of a moderately concentrated nectar (17-50%). A secretory tissue at the distal portion of the cuniculus is responsible for nectar secretion. Secreted nectar is stored in the nectar chamber. Pollinaria deposition on the apex of bird beaks allows both short- and long-billed birds to pollinate the flowers. Plants from the studied population were fully self-compatible but pollinator-dependent. Pollinator frequency was higher than in food-deceptive Cattleya. As far as is known, this is the first record of nectar production in Cattleya. The discovery of a reward-producing species (C. cernua) within a genus entirely pollinated by food-deception strategies (Cattleya) provides clues and new insights into understanding the diversification of Laeliinae across the Neotropics.
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Affiliation(s)
- E R Pansarin
- Department of Biology, Laboratory of Molecular Biology and Systematics of Plants, University of São Paulo, Faculty of Philosophy, Sciences and Literature of Ribeirão Preto, Ribeirão Preto, SP, Brazil
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25
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Dobson FS, Correia HE, Abebe A. How much multiple paternity should we expect? A study of birds and contrast with mammals. Ecol Evol 2024; 14:e11054. [PMID: 38435004 PMCID: PMC10905237 DOI: 10.1002/ece3.11054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Revised: 01/29/2024] [Accepted: 02/05/2024] [Indexed: 03/05/2024] Open
Abstract
Parentage analyses via molecular markers have revealed multiple paternity within the broods of polytocous species, reshaping our understanding of animal behavior, ecology, and evolution. In a meta-analysis of multiple paternity in bird and mammal species, we conducted a literature search and found 138 bird and 64 mammal populations with microsatellite DNA paternity results. Bird populations averaged 19.5% multiple paternity and mammals more than twice that level (46.1%). We used a Bayesian approach to construct a null model for how multiple paternity should behave at random among species, under the assumption that all mated males have equal likelihood of siring success, given mean brood size and mean number of sires. We compared the differences between the null model and the actual probabilities of multiple paternity. While a few bird populations fell close to the null model, most did not, averaging 34.0-percentage points below null model predictions; mammals had an average probability of multiple paternity 13.6-percentage points below the null model. Differences between bird and mammal species were also subjected to comparative phylogenetic analyses that generally confirmed our analyses that did not adjust for estimated historical relationships. Birds exhibited extremely low probabilities of multiple paternity, not only compared to mammals but also relative to other major animal taxa. The generally low probability of multiple paternity in birds might be produced by a variety of factors, including behaviors that reflect sexual selection (extreme mate guarding or unifocal female choice) and sperm competition (e.g., precedence effects favoring fertilization by early or late matings).
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Affiliation(s)
- F. Stephen Dobson
- Department of Biological SciencesAuburn UniversityAuburnAlabamaUSA
- Unité Mixte de Recherche 7178, Institut Pluridisciplinaire Hubert Curien, Centre National de la Recherche ScientifiqueUniversité de StrasbourgStrasbourgFrance
| | - Hannah E. Correia
- Department of Environmental Health and EngineeringJohns Hopkins UniversityBaltimoreMarylandUSA
| | - Ash Abebe
- Department of Mathematics and StatisticsAuburn UniversityAuburnAlabamaUSA
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26
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Sinnott DM, Burchell J, Witte C, Burns R, Kubiski S. Systemic avian poxvirus infections associated with the B1 subclade of canarypox virus. Vet Pathol 2024; 61:279-287. [PMID: 37547925 DOI: 10.1177/03009858231190639] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/08/2023]
Abstract
Avian poxvirus infections typically manifest as 2 forms: cutaneous ("dry") pox, characterized by proliferative nodules on the skin, and diphtheritic ("wet") pox, characterized by plaques of caseous exudate in the oropharynx and upper respiratory and gastrointestinal tracts. Systemic spread of virus to visceral organs beyond the skin and mucous membranes is rarely reported. Out of 151 cases diagnosed with avian poxvirus over a 20-year period at a zoological institution, 22 were characterized as having systemic involvement based on histopathology and molecular findings. Gross lesions in systemic cases included soft white nodules scattered throughout the liver, spleen, and kidneys. Two histopathologic patterns emerged: (1) widespread histiocytic inflammation in visceral organs with intrahistiocytic viral inclusions and (2) severe, localized dry or wet pox lesions with poxvirus-like inclusions within dermal and subepithelial histiocytes. In situ hybridization targeting the core P4b protein gene confirmed the presence of poxvirus DNA within histiocytes in both patterns. Polymerase chain reaction was performed targeting the reticuloendothelial virus long terminal repeat (REV LTR) flanking region and the core P4b protein gene. Sequences of the REV LTR flanking region from all systemic pox cases were identical to a previously described condorpox virus isolated from an Andean condor with systemic pox. Sequences of the core P4b protein gene from all systemic pox cases grouped into cluster 2 of the B1 subclade of canarypox viruses. Systemic involvement of avian poxvirus likely occurs as a result of infection with certain strain variations in combination with various possible host and environmental factors.
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27
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Kuo PC, Navalón G, Benson RBJ, Field DJ. Macroevolutionary drivers of morphological disparity in the avian quadrate. Proc Biol Sci 2024; 291:20232250. [PMID: 38378144 PMCID: PMC10878815 DOI: 10.1098/rspb.2023.2250] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2023] [Accepted: 01/16/2024] [Indexed: 02/22/2024] Open
Abstract
In birds, the quadrate connects the mandible and skull, and plays an important role in cranial kinesis. Avian quadrate morphology may therefore be assumed to have been influenced by selective pressures related to feeding ecology, yet large-scale variation in quadrate morphology and its potential relationship with ecology have never been quantitatively investigated. Here, we used geometric morphometrics and phylogenetic comparative methods to quantify morphological variation of the quadrate and its relationship with key ecological features across a wide phylogenetic sample. We found non-significant associations between quadrate shape and feeding ecology across different scales of phylogenetic comparison; indeed, allometry and phylogeny exhibit stronger relationships with quadrate shape than ecological features. We show that similar quadrate shapes are associated with widely varying dietary ecologies (one-to-many mapping), while divergent quadrate shapes are associated with similar dietary ecologies (many-to-one mapping). Moreover, we show that the avian quadrate evolves as an integrated unit and exhibits strong associations with the morphologies of neighbouring bones. Our results collectively illustrate that quadrate shape has evolved jointly with other elements of the avian kinetic system, with the major crown bird lineages exploring alternative quadrate morphologies, highlighting the potential diagnostic value of quadrate morphology in investigations of bird systematics.
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Affiliation(s)
- Pei-Chen Kuo
- Department of Earth Sciences, University of Cambridge, Downing St, Cambridge CB2 3EQ, UK
| | - Guillermo Navalón
- Department of Earth Sciences, University of Cambridge, Downing St, Cambridge CB2 3EQ, UK
| | - Roger B. J. Benson
- Department of Earth Sciences, University of Oxford, 3 S Parks Rd, Oxford OX1 3AN, UK
- American Museum of Natural History, 200 Central Park West, New York, NY, USA
| | - Daniel J. Field
- Department of Earth Sciences, University of Cambridge, Downing St, Cambridge CB2 3EQ, UK
- Museum of Zoology, University of Cambridge, Downing St, Cambridge CB2 3EJ, UK
- Fossil Reptiles, Amphibians and Birds Section, Natural History Museum, Cromwell Road, London SW7 5BD, UK
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28
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Grzegorczyk E, Caizergues A, Eraud C, Francesiaz C, Le Rest K, Guillemain M. Demographic and evolutionary consequences of hunting of wild birds. Biol Rev Camb Philos Soc 2024. [PMID: 38409953 DOI: 10.1111/brv.13069] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2023] [Revised: 02/14/2024] [Accepted: 02/19/2024] [Indexed: 02/28/2024]
Abstract
Hunting has a long tradition in human evolutionary history and remains a common leisure activity or an important source of food. Herein, we first briefly review the literature on the demographic consequences of hunting and associated analytical methods. We then address the question of potential selective hunting and its possible genetic/evolutionary consequences. Birds have historically been popular models for demographic studies, and the huge amount of census and ringing data accumulated over the last century has paved the way for research about the demographic effects of harvesting. By contrast, the literature on the evolutionary consequences of harvesting is dominated by studies on mammals (especially ungulates) and fish. In these taxa, individuals selected for harvest often have particular traits such as large body size or extravagant secondary sexual characters (e.g. antlers, horns, etc.). Our review shows that targeting individuals according to such genetically heritable traits can exert strong selective pressures and alter the evolutionary trajectory of populations for these or correlated traits. Studies focusing on the evolutionary consequences of hunting in birds are extremely rare, likely because birds within populations appear much more similar, and do not display individual differences to the same extent as many mammals and fishes. Nevertheless, even without conscious choice by hunters, there remains the potential for selection through hunting in birds, for example by genetically inherited traits such as personality or pace-of-life. We emphasise that because so many bird species experience high hunting pressure, the possible selective effect of harvest in birds and its evolutionary consequences deserves far more attention, and that hunting may be one major driver of bird evolutionary trajectories that should be carefully considered in wildlife management schemes.
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Affiliation(s)
- Emilienne Grzegorczyk
- Office Français de la Biodiversité, Service Conservation et Gestion Durable des Espèces Exploitées, 405 Route de Prissé-la-Charrière, Villiers-en-Bois, 79360, France
| | - Alain Caizergues
- Office Français de la Biodiversité, Service Conservation et Gestion Durable des Espèces Exploitées, 08 Bd A. Einstein, CS42355, Nantes Cedex 3, 44323, France
| | - Cyril Eraud
- Office Français de la Biodiversité, Service Conservation et Gestion des Espèces à Enjeux, 405 Route de Prissé-la-Charrière, Villiers-en-Bois, 79360, France
| | - Charlotte Francesiaz
- Office Français de la Biodiversité, Service Conservation et Gestion Durable des Espèces Exploitées, 147 Avenue de Lodève, Juvignac, 34990, France
| | - Kévin Le Rest
- Office Français de la Biodiversité, Service Conservation et Gestion Durable des Espèces Exploitées, 08 Bd A. Einstein, CS42355, Nantes Cedex 3, 44323, France
| | - Matthieu Guillemain
- Office Français de la Biodiversité, Service Conservation et Gestion Durable des Espèces Exploitées, La Tour du Valat, Le Sambuc, Arles, 13200, France
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29
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Gonçalves VN, Pimenta RS, Lopes FAC, Santos KCR, Silva MC, Convey P, Câmara PEAS, Rosa LH. Fungal and fungal-like diversity present in ornithogenically influenced maritime Antarctic soils assessed using metabarcoding. J Basic Microbiol 2024. [PMID: 38386010 DOI: 10.1002/jobm.202300601] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2023] [Revised: 01/14/2024] [Accepted: 02/03/2024] [Indexed: 02/23/2024]
Abstract
We assessed soil fungal and fungal-like diversity using metabarcoding in ornithogenically influenced soils around nests of the bird species Phalacrocorax atriceps, Macronectes giganteus, Pygoscelis antarcticus, and Pygoscelis adelie on the South Shetland Islands, maritime Antarctic. A total of 1,392,784 fungal DNA reads was obtained and assigned to 186 amplicon sequence variants (ASVs). The dominant fungal phylum was Ascomycota, followed by Basidiomycota, Chytridiomycota, Blastocladiomycota, Rozellomycota, Mortierellomycota, Monoblepharomycota, Aphelidiomycota, Basidiobolomycota, Mucoromycota, and the fungal-like Oomycota (Stramenopila), in rank order. Antarctomyces sp., Blastocladiomycota sp., Pseudogymnoascus pannorum, Microascaceae sp., Mortierella sp., Lobulomycetales sp., Sordariomycetes sp., Fungal sp., Rhizophydiales sp., Pseudeurotiaceae sp., Chytridiomycota sp. 1, Filobasidiella sp., Tausonia pullulans, Betamyces sp., and Leucosporidium sp. were the most abundant assigned taxa. The fungal assemblages present in the different ornithogenically influenced soils displayed different diversity indices. However, in general, we detected high fungal diversity and few taxa shared between the samples. Despite the polyextreme environmental conditions experienced in these Antarctic soils, the metabarcoding approach detected a rich and complex fungal community dominated by saprophytes, but with some pathogenic taxa also present. The community was dominated by psychrophilic and psychrotolerant taxa, some apparently endemic to Antarctica, and those identified only at higher taxonomic levels, which may represent currently undescribed fungi. The mycobiome detected included taxa characterized by different ecological roles, including saprotrophic, human- and animal-associated, phytopathogenic, mutualistic, and cosmopolitan. These fungi may potentially be dispersed by birds or in the air column over great distances, including between different regions within Antarctica and from South America, Africa, and Oceania.
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Affiliation(s)
- Vívian Nicolau Gonçalves
- Departamento de Microbiologia, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brasil
| | - Raphael Sânzio Pimenta
- Laboratório de Microbiologia Geral e Aplicada, Universidade Federal do Tocantins, Palmas, Tocantins, Brasil
| | - Fabyano A C Lopes
- Laboratório de Microbiologia, Universidade Federal do Tocantins, Palmas, Tocantins, Brasil
| | - Karita C R Santos
- Laboratório de Microbiologia, Universidade Federal do Tocantins, Palmas, Tocantins, Brasil
| | - Micheline C Silva
- Departamento de Botânica, Universidade de Brasília, Brasília, Brasil
| | - Peter Convey
- British Antarctic Survey, NERC, Cambridge, UK
- Department of Zoology, University of Johannesburg, Auckland Park, Johannesburg, South Africa
- Millennium Institute Biodiversity of Antarctic and Subantarctic Ecosystems (BASE), Santiago, Las Palmeras, Chile
- Cape Horn International Center (CHIC), Puerto Williams, Chile
| | - Paulo E A S Câmara
- Departamento de Botânica, Universidade de Brasília, Brasília, Brasil
- Programa de Pós-graduação em Fungos, Algas e Plantas, UFSC, Florianópolis, Brasil
| | - Luiz H Rosa
- Departamento de Microbiologia, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brasil
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30
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Langebrake C, Manthey G, Frederiksen A, Lugo Ramos JS, Dutheil JY, Chetverikova R, Solov'yov IA, Mouritsen H, Liedvogel M. Adaptive evolution and loss of a putative magnetoreceptor in passerines. Proc Biol Sci 2024; 291:20232308. [PMID: 38320616 PMCID: PMC10846946 DOI: 10.1098/rspb.2023.2308] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Accepted: 01/08/2024] [Indexed: 02/08/2024] Open
Abstract
Migratory birds possess remarkable accuracy in orientation and navigation, which involves various compass systems including the magnetic compass. Identifying the primary magnetosensor remains a fundamental open question. Cryptochromes (Cry) have been shown to be magnetically sensitive, and Cry4a from a migratory songbird seems to show enhanced magnetic sensitivity in vitro compared to Cry4a from resident species. We investigate Cry and their potential involvement in magnetoreception in a phylogenetic framework, integrating molecular evolutionary analyses with protein dynamics modelling. Our analysis is based on 363 bird genomes and identifies different selection regimes in passerines. We show that Cry4a is characterized by strong positive selection and high variability, typical characteristics of sensor proteins. We identify key sites that are likely to have facilitated the evolution of an optimized sensory protein for night-time orientation in songbirds. Additionally, we show that Cry4 was lost in hummingbirds, parrots and Tyranni (Suboscines), and thus identified a gene deletion, which might facilitate testing the function of Cry4a in birds. In contrast, the other avian Cry (Cry1 and Cry2) were highly conserved across all species, indicating basal, non-sensory functions. Our results support a specialization or functional differentiation of Cry4 in songbirds which could be magnetosensation.
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Affiliation(s)
- Corinna Langebrake
- Institute of Avian Research ‘Vogelwarte Helgoland’, 26386 Wilhelmshaven, Germany
- MPRG Behavioural Genomics, MPI Evolutionary Biology, 24306 Plön, Germany
| | - Georg Manthey
- Institute of Avian Research ‘Vogelwarte Helgoland’, 26386 Wilhelmshaven, Germany
- Department of Physics, Carl von Ossietzky Universität Oldenburg, 26129 Oldenburg
| | - Anders Frederiksen
- Department of Physics, Carl von Ossietzky Universität Oldenburg, 26129 Oldenburg
| | - Juan S. Lugo Ramos
- MPRG Behavioural Genomics, MPI Evolutionary Biology, 24306 Plön, Germany
- The Francis Crick Institute, London NW1 1AT, UK
| | - Julien Y. Dutheil
- Research Group Molecular Systems Evolution, MPI Evolutionary Biology, 24306 Plön, Germany
| | - Raisa Chetverikova
- Biology and Environmental Sciences Department, Carl von Ossietzky Universität Oldenburg, 26129 Oldenburg
| | - Ilia A. Solov'yov
- Department of Physics, Carl von Ossietzky Universität Oldenburg, 26129 Oldenburg
- Research Centre for Neurosensory Sciences, Carl von Ossietzky Universität Oldenburg, 26129 Oldenburg
- Center for Nanoscale Dynamics (CENAD), Carl von Ossietzky Universität Oldenburg, 26129 Oldenburg
| | - Henrik Mouritsen
- Biology and Environmental Sciences Department, Carl von Ossietzky Universität Oldenburg, 26129 Oldenburg
- Research Centre for Neurosensory Sciences, Carl von Ossietzky Universität Oldenburg, 26129 Oldenburg
| | - Miriam Liedvogel
- Institute of Avian Research ‘Vogelwarte Helgoland’, 26386 Wilhelmshaven, Germany
- MPRG Behavioural Genomics, MPI Evolutionary Biology, 24306 Plön, Germany
- Biology and Environmental Sciences Department, Carl von Ossietzky Universität Oldenburg, 26129 Oldenburg
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Balcázar L, Azócar-Aedo L, Barrera V, Meniconi G, Muñoz V, Valencia-Soto C. Detection of Antibodies for Pathogenic Leptospira in Wild Mammals and Birds from Southern Chile-First Record of Seropositivity in a Guiña ( Leopardus guigna). Animals (Basel) 2024; 14:601. [PMID: 38396569 PMCID: PMC10886123 DOI: 10.3390/ani14040601] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2023] [Revised: 01/17/2024] [Accepted: 02/05/2024] [Indexed: 02/25/2024] Open
Abstract
Leptospirosis is a neglected bacterial zoonotic disease of worldwide distribution that is present in different animal species. This epidemiological study determined the seroprevalence of pathogenic Leptospira spp. in animals at a wildlife rehabilitation center in Puerto Montt, southern Chile, by sampling 60 animals belonging to three classes (birds, mammals, and reptiles). Diagnosis was performed using the microscopic agglutination test with a panel of eight serovars and serogroups. The results showed that 15 animals had anti-Leptospira antibodies, obtaining a seroprevalence of 25.00%, with Leptospira borgpetersenii serogroup Tarassovi presenting reactivity in 13 of the seropositive animals. Among the classes of mammals, chilla foxes (Lycalopex griseus) and pudus (Pudu puda) were seropositive. A guiña (Leopardus guigna) was also seropositive, which was described for the first time in mammals. Among the classes of birds, choroy parrots (Enicognathus leptorhynchus), bandurrias (Theristicus melanopis), and Magellanic penguins (Spheniscus magellanicus) were seropositive. Routine examinations to diagnose leptospirosis, perform epidemiological surveillance, and apply prevention and control measures are necessary, and additional research focusing on the One Health approach to explore the epidemiological role of different wild animal species in the maintenance and transmission of leptospirosis at the local and global levels are recommended.
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Affiliation(s)
- Luis Balcázar
- Facultad de Ciencias de la Naturaleza, Universidad San Sebastián Sede de la Patagonia, Puerto Montt 5480000, Chile
| | - Lucía Azócar-Aedo
- Facultad de Ciencias de la Naturaleza, Universidad San Sebastián Sede de la Patagonia, Puerto Montt 5480000, Chile
| | - Violeta Barrera
- Facultad de Ciencias de la Naturaleza, Universidad San Sebastián Sede de la Patagonia, Puerto Montt 5480000, Chile
| | - Gloria Meniconi
- Facultad de Ciencias de la Naturaleza, Universidad San Sebastián Sede de la Patagonia, Puerto Montt 5480000, Chile
| | - Victoria Muñoz
- Facultad de Ciencias de la Naturaleza, Universidad San Sebastián Sede de la Patagonia, Puerto Montt 5480000, Chile
| | - Carola Valencia-Soto
- Parque Nacional Puyehue, Corporación Nacional Forestal (CONAF), Ruta 215, Puyehue 5360000, Chile
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Kretschmer R, Santos de Souza M, Gunski RJ, Del Valle Garnero A, de Freitas TRO, Zefa E, Toma GA, Cioffi MDB, Herculano Corrêa de Oliveira E, O'Connor RE, Griffin DK. Understanding the chromosomal evolution in cuckoos (Aves, Cuculiformes): a journey through unusual rearrangements. Genome 2024. [PMID: 38346285 DOI: 10.1139/gen-2023-0101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/02/2024]
Abstract
The Cuculiformes are a family of over 150 species that live in a range of habitats, such as forests, savannas, and deserts. Here, bacterial artificial chromosome (BAC) probes (75 from chicken and 14 from zebra finch macrochromosomes 1-10 +ZW and for microchromosomes 11-28 (except 16)) were used to investigate chromosome homologies between chicken and the squirrel cuckoo (Piaya cayana). In addition, repetitive DNA probes were applied to characterize the chromosome organization and to explore the role of these sequences in the karyotype evolution of P. cayana. We also applied BAC probes for chicken chromosome 17 and Z to the guira cuckoo (Guira guira) to test whether this species has an unusual Robertsonian translocation between a microchromosome and the Z chromosome, recently described in the smooth-billed ani (Crotophaga ani). Our results revealed extensive chromosome reorganization with inter- and intrachromosomal rearrangements in P. cayana, including a conspicuous chromosome size and heterochromatin polymorphism on chromosome pair 20. Furthermore, we confirmed that the Z-autosome Robertsonian translocation found in C. ani is also found in G. guira, not P. cayana. These findings suggest that this translocation occurred prior to the divergence between C. ani and G. guira, but after the divergence with P. cayana.
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Affiliation(s)
- Rafael Kretschmer
- School of Biosciences, University of Kent, Canterbury, Kent, CT2 7NJ, UK
- Departamento de Ecologia, Zoologia e Genética, Instituto de Biologia, Universidade Federal de Pelotas, Pelotas 96010-900, RS, Brazil
| | - Marcelo Santos de Souza
- Laboratório de Diversidade Genética Animal, Universidade Federal do Pampa, São Gabriel, Rio Grande do Sul 97300-162, Brazil
| | - Ricardo José Gunski
- Laboratório de Diversidade Genética Animal, Universidade Federal do Pampa, São Gabriel, Rio Grande do Sul 97300-162, Brazil
| | - Analía Del Valle Garnero
- Laboratório de Diversidade Genética Animal, Universidade Federal do Pampa, São Gabriel, Rio Grande do Sul 97300-162, Brazil
| | | | - Edison Zefa
- Departamento de Ecologia, Zoologia e Genética, Instituto de Biologia, Universidade Federal de Pelotas, Pelotas 96010-900, RS, Brazil
| | - Gustavo Akira Toma
- Departamento de Genética e Evolução, Universidade Federal de São Carlos, São Carlos, São Paulo 13565-905, Brazil
| | - Marcelo de Bello Cioffi
- Departamento de Genética e Evolução, Universidade Federal de São Carlos, São Carlos, São Paulo 13565-905, Brazil
| | - Edivaldo Herculano Corrêa de Oliveira
- Laboratório de Cultura de Tecidos e Citogenética, SAMAM, Instituto Evandro Chagas, Ananindeua, Pará 67030-000, Brazil
- Instituto de Ciências Exatas e Naturais, Universidade Federal do Pará, Belém, Pará 66075-110, Brazil
| | - Rebecca E O'Connor
- School of Biosciences, University of Kent, Canterbury, Kent, CT2 7NJ, UK
| | - Darren K Griffin
- School of Biosciences, University of Kent, Canterbury, Kent, CT2 7NJ, UK
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33
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Sun C, Hassin Y, Boonman A, Shwartz A, Yovel Y. Species and habitat specific changes in bird activity in an urban environment during Covid 19 lockdown. eLife 2024; 12:RP88064. [PMID: 38335247 PMCID: PMC10942578 DOI: 10.7554/elife.88064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/12/2024] Open
Abstract
Covid-19 lockdowns provided ecologists with a rare opportunity to examine how animals behave when humans are absent. Indeed many studies reported various effects of lockdowns on animal activity, especially in urban areas and other human-dominated habitats. We explored how Covid-19 lockdowns in Israel have influenced bird activity in an urban environment by using continuous acoustic recordings to monitor three common bird species that differ in their level of adaptation to the urban ecosystem: (1) the hooded crow, an urban exploiter, which depends heavily on anthropogenic resources; (2) the rose-ringed parakeet, an invasive alien species that has adapted to exploit human resources; and (3) the graceful prinia, an urban adapter, which is relatively shy of humans and can be found in urban habitats with shrubs and prairies. Acoustic recordings provided continuous monitoring of bird activity without an effect of the observer on the animal. We performed dense sampling of a 1.3 square km area in northern Tel-Aviv by placing 17 recorders for more than a month in different micro-habitats within this region including roads, residential areas and urban parks. We monitored both lockdown and no-lockdown periods. We portray a complex dynamic system where the activity of specific bird species depended on many environmental parameters and decreases or increases in a habitat-dependent manner during lockdown. Specifically, urban exploiter species decreased their activity in most urban habitats during lockdown, while human adapter species increased their activity during lockdown especially in parks where humans were absent. Our results also demonstrate the value of different habitats within urban environments for animal activity, specifically highlighting the importance of urban parks. These species- and habitat-specific changes in activity might explain the contradicting results reported by others who have not performed a habitat specific analysis.
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Affiliation(s)
- Congnan Sun
- School of Zoology, Faculty of Life Sciences, Tel Aviv UniversityTel AvivIsrael
- College of Life Sciences, Hebei Normal UniversityShijiazhuangChina
- Hebei Collaborative Innovation Center for Eco-Environment, Hebei Normal UniversityShijiazhuangChina
| | - Yoel Hassin
- School of Zoology, Faculty of Life Sciences, Tel Aviv UniversityTel AvivIsrael
| | - Arjan Boonman
- School of Zoology, Faculty of Life Sciences, Tel Aviv UniversityTel AvivIsrael
| | - Assaf Shwartz
- Faculty of Architecture and Town Planning, Technion, Israel Institute of TechnologyHaifaIsrael
| | - Yossi Yovel
- School of Zoology, Faculty of Life Sciences, Tel Aviv UniversityTel AvivIsrael
- The Steinhardt Museum of Natural History, National Research Center for Biodiversity Studies, Tel-Aviv UniversityTel AvivIsrael
- Sagol School of Neuroscience, Tel Aviv UniversityTel AvivIsrael
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34
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Rhim H, Kim M, Gim S, Han JI. Diagnostic value of serum amyloid A in differentiating the inflammatory disorders in wild birds. Front Vet Sci 2024; 11:1284113. [PMID: 38379926 PMCID: PMC10876875 DOI: 10.3389/fvets.2024.1284113] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2023] [Accepted: 01/18/2024] [Indexed: 02/22/2024] Open
Abstract
Rescued wild birds have very high rates of inflammatory diseases; however, there have been limitations in assessing them sensitively. Few studies have examined acute-phase proteins in wild birds. In this study, serum amyloid A (SAA) was evaluated as an inflammatory indicator along with traditional indices such as white blood cell count, albumin, and albumin/globulin ratio. In total, 291 samples from 139 birds of six avian species were analyzed. All samples were divided into four groups (severe, moderate, mild injuries, and clinically healthy) based on clinical examinations and evaluated by group. SAA levels were measured using an anti-chicken SAA ELISA kit and compared with leukocyte counts, albumin concentrations, and albumin/globulin ratios. Differences among groups were evaluated using the Kruskal-Wallis test, followed by a post hoc test using Dunn's multiple comparisons with SPSS V27. Statistical significance was set at a value of p of <0.05. The median concentration and interquartile range (ng/mL) of SAA in each group were 78.10 ng/mL (50.71-109.30), 31.15 ng/mL (19.85-49.24), 9.68 ng/mL (4.71-22.06), and 3.10 ng/mL (1.50-6.00). We observed a significant difference in the mean levels between the groups (p < 0.001), with the same results observed across species. All four indices showed significant differences in mean values between the groups (p < 0.001). In addition, SAA showed rapid changes in periodically collected samples, reflecting either a positive treatment response or the onset of subclinical diseases. SAA can be used to detect inflammatory conditions and asymptomatic disease in wild birds and is helpful in accurately identifying current health status, which is essential for successful treatment and release.
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Affiliation(s)
- Haerin Rhim
- Laboratory of Wildlife Medicine, College of Veterinary Medicine, Jeonbuk National University, Iksan, Republic of Korea
| | - Myeongsu Kim
- Laboratory of Wildlife Medicine, College of Veterinary Medicine, Jeonbuk National University, Iksan, Republic of Korea
- Jeonbuk Wildlife Center, Jeonbuk National University, Iksan, Republic of Korea
| | - Seulgi Gim
- Jeonbuk Wildlife Center, Jeonbuk National University, Iksan, Republic of Korea
| | - Jae-Ik Han
- Laboratory of Wildlife Medicine, College of Veterinary Medicine, Jeonbuk National University, Iksan, Republic of Korea
- Jeonbuk Wildlife Center, Jeonbuk National University, Iksan, Republic of Korea
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Pollock HS, Rutt CL, Cooper WJ, Brawn JD, Cheviron ZA, Luther DA. Equivocal support for the climate variability hypothesis within a Neotropical bird assemblage. Ecology 2024; 105:e4206. [PMID: 37950619 DOI: 10.1002/ecy.4206] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/09/2023] [Revised: 07/03/2023] [Accepted: 10/05/2023] [Indexed: 11/13/2023]
Abstract
The climate variability hypothesis posits that an organism's exposure to temperature variability determines the breadth of its thermal tolerance and has become an important framework for understanding variation in species' susceptibilities to climate change. For example, ectotherms from more thermally stable environments tend to have narrower thermal tolerances and greater sensitivity to projected climate warming. Among endotherms, however, the relationship between climate variability and thermal physiology is less clear, particularly with regard to microclimate variation-small-scale differences within or between habitats. To address this gap, we explored associations between two sources of temperature variation (habitat type and vertical forest stratum) and (1) thermal physiological traits and (2) temperature sensitivity metrics within a diverse assemblage of Neotropical birds (n = 89 species). We used long-term temperature data to establish that daily temperature regimes in open habitats and forest canopy were both hotter and more variable than those in the forest interior and forest understory, respectively. Despite these differences in temperature regime, however, we found little evidence that species' thermal physiological traits or temperature sensitivity varied in association with either habitat type or vertical stratum. Our findings provide two novel and important insights. First, and in contrast to the supporting empirical evidence from ectotherms, the thermal physiology of birds at our study site appears to be largely decoupled from local temperature variation, providing equivocal support for the climate variability hypothesis in endotherms. Second, we found no evidence that the thermal physiology of understory forest birds differed from that of canopy or open-habitat species-an oft-invoked, yet previously untested, mechanism for why these species are so vulnerable to environmental change.
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Affiliation(s)
- Henry S Pollock
- Department of Natural Resources and Environmental Sciences, University of Illinois Urbana-Champaign, Urbana, Illinois, USA
| | - Cameron L Rutt
- Department of Biology, George Mason University, Fairfax, Virginia, USA
- American Bird Conservancy, The Plains, Virginia, USA
| | | | - Jeffrey D Brawn
- Department of Natural Resources and Environmental Sciences, University of Illinois Urbana-Champaign, Urbana, Illinois, USA
| | - Zachary A Cheviron
- Division of Biological Sciences, University of Montana, Missoula, Montana, USA
| | - David A Luther
- Department of Biology, George Mason University, Fairfax, Virginia, USA
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Zhu Y, Ma R, Hu L, Yang H, Gong H, He K. Structure, variation and assembly of body-wide microbiomes in endangered crested ibis Nipponia nippon. Mol Ecol 2024; 33:e17238. [PMID: 38108198 DOI: 10.1111/mec.17238] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2023] [Revised: 10/17/2023] [Accepted: 11/27/2023] [Indexed: 12/19/2023]
Abstract
Limited knowledge of bird microbiome in the all-body niche hinders our understanding of host-microbial relationships and animal health. Here, we characterized the microbial composition of the crested ibis from 13 body sites, representing the cloaca, oral, feather and skin habitats, and explored assembly mechanism structuring the bacterial community of the four habitats respectively. The bacterial community characteristics were distinct among the four habitats. The skin harboured the highest alpha diversity and most diverse functions, followed by feather, oral and cloaca. Individual-specific features were observed when the skin and feathers were concentrated independently. Skin and feather samples of multiple body sites from the same individual were more similar than those from different individuals. Although a significant proportion of the microbiota in the host (85.7%-96.5%) was not derived from the environmental microbiome, as body sites became more exposed to the environment, the relative importance of neutral processes (random drift or dispersal) increased. Neutral processes were the most important contributor in shaping the feather microbiome communities (R2 = .859). A higher percentage of taxa (29.3%) on the skin were selected by hosts compared to taxa on other body habitats. This study demonstrated that niche speciation and partial neutral processes, rather than environmental sources, contribute to microbiome variation in the crested ibis. These results enhance our knowledge of baseline microbial diversity in birds and will aid health management in crested ibises in the future.
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Affiliation(s)
- Ying Zhu
- Institute of Qinghai-Tibetan Plateau, Provincial Key Laboratory for Alpine Grassland Conservation and Utilization on Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, China
| | - Ruifeng Ma
- Institute of Qinghai-Tibetan Plateau, Provincial Key Laboratory for Alpine Grassland Conservation and Utilization on Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, China
| | - Lei Hu
- Institute of Qinghai-Tibetan Plateau, Provincial Key Laboratory for Alpine Grassland Conservation and Utilization on Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, China
| | - Haiqiong Yang
- Emei Breeding Center for Crested Ibis, Emei, China
- College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China
| | - Haizhou Gong
- College of Animal Science and Technology, Yangzhou University, Yangzhou, China
| | - Ke He
- College of Animal Science and Technology, College of Veterinary Medicine, Zhejiang A & F University, Hangzhou, China
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Robles C, Romero-Egea V, Traveset A, Ruiz de Ybáñez R, Hervías-Parejo S. Vertebrates can be more important pollinators than invertebrates on islands: the case of Malva (=Lavatera) arborea L. AoB Plants 2024; 16:plae010. [PMID: 38497048 PMCID: PMC10944019 DOI: 10.1093/aobpla/plae010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/01/2023] [Accepted: 02/23/2024] [Indexed: 03/19/2024]
Abstract
Premise of the study: On islands, flowering plants tend to be more generalist in their pollination needs, as insects (the main pollinators of flowering plants) are underrepresented in these ecosystems compared to the mainland. In addition, some vertebrate species that are typically insectivorous or granivorous on the mainland are forced to broaden their diet and consume other resources such as nectar or pollen on the islands. The shrub Malva arborea, with its large and colourful flowers, attracts different groups of potential pollinators. This study aimed to compare the effectiveness of vertebrates versus insects in an insular population of M. arborea and to investigate its reproductive system. Methods: For three groups of taxa (insects, birds and lizards), we assessed the two components of pollination effectiveness: (i) the quantitative component (i.e. number of visits and number of flowers contacted) through direct observations of flowers; and (ii) the qualitative component (fruit and seed set, number and size of seeds and proportion of seedling emergence) through pollinator exclusion experiments. Key results: Vertebrates (birds and lizards) were quantitatively the most effective pollinators, followed by insects. However, when all three groups visited the flowers, fruit and seed set were higher than when any of them were excluded. We also found that M. arborea has hermaphrodite flowers and is able to reproduce by autogamy, although less efficiently than when pollinated by animals. Conclusions: Both vertebrates and insects play an important role in the reproduction of M. arborea. Although the plant does not need pollinators to produce seeds, its reproductive success increases when all pollinators are allowed to visit the flowers. Besides providing new information on M. arborea, these findings may help to better understand the role of different pollinator groups in the reproduction of other plant species, especially on islands where the co-occurrence of vertebrate and invertebrate pollination in the same plant species is usual.
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Affiliation(s)
- Cristina Robles
- Department of Animal Health, Campus de Espinardo, University of Murcia, 30100 Murcia, Spain
| | - Víctor Romero-Egea
- Department of Animal Health, Campus de Espinardo, University of Murcia, 30100 Murcia, Spain
| | - Anna Traveset
- Mediterranean Institute for Advanced Studies (IMEDEA, UIB-CSIC), Global Change Research group, Miquel Marquès 21, 07190 Esporles, Spain
| | - Rocío Ruiz de Ybáñez
- Department of Animal Health, Campus de Espinardo, University of Murcia, 30100 Murcia, Spain
| | - Sandra Hervías-Parejo
- Mediterranean Institute for Advanced Studies (IMEDEA, UIB-CSIC), Global Change Research group, Miquel Marquès 21, 07190 Esporles, Spain
- Centre for Functional Ecology (CFE-UC), Community Ecology Lab, Department of Life Sciences, University of Coimbra, Calçada Martim de Freitas, 3004-531 Coimbra, Portugal
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Hodinka BL, Williams TD. Phenotypic plasticity in mass loss during chick rearing in the European starling ( Sturnus vulgaris). Ecol Evol 2024; 14:e11028. [PMID: 38405406 PMCID: PMC10891361 DOI: 10.1002/ece3.11028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2023] [Revised: 12/30/2023] [Accepted: 01/31/2024] [Indexed: 02/27/2024] Open
Abstract
It has long been recognized that mass loss during breeding could be adaptive (e.g., by ameliorating the costs of increased parental activity). However, many studies still commonly interpret mass loss as evidence of "stress" or a cost of reproduction (i.e., a negative effect of high workload during chick provisioning). Despite several studies reporting evidence in support of both hypotheses, the ecological and/or life-history contexts under which mass loss may be viewed as a "cost" or an adaptive strategy are still unclear. Here, we used a long-term dataset from a breeding population of European starlings (Sturnus vulgaris) to investigate natural annual and individual variation in body mass and mass loss and to test whether mass loss during chick rearing represents a phenotypically plastic trait that varies predictably in relation to ecological context and individual quality. While there was significant annual variation in incubation mass, chick-rearing mass, and mass change, there were no systematic relationships between mass loss and current breeding success or future fecundity and survival. In addition, we found no evidence of intra-annual repeatability of mass loss between first and second broods ( = .00) but moderate interannual repeatability of mass loss (R = .61) during first broods, suggesting differences in mass loss under different selective pressures. However, we found no covariation between residual intra-individual variation in mass loss for first broods and other reproductive or life-history traits. We therefore found no support for the idea that mass loss reflects "reproductive stress" in our system: there were no negative relationships between mass loss and either current or future reproduction and survival (local return rate). Our results are consistent with mass loss being an individually plastic trait, with individuals using mass loss to "level the playing field" and individually optimize reproductive effort and fitness within their specific ecological context and relative to their individual quality for a given breeding attempt.
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Affiliation(s)
- Brett L. Hodinka
- Department of Biological SciencesSimon Fraser UniversityBurnabyBritish ColumbiaCanada
| | - Tony D. Williams
- Department of Biological SciencesSimon Fraser UniversityBurnabyBritish ColumbiaCanada
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Maag N, Korner-Nievergelt F, Szymkowiak J, Hałas N, Maziarz M, Neubauer G, Luepold SB, Carlotti S, Schaub M, Flade M, Scherrer D, Grendelmeier A, Riess M, Stelbrink P, Pasinelli G. Wood warbler population dynamics in response to mast seeding regimes in Europe. Ecology 2024; 105:e4227. [PMID: 38038276 DOI: 10.1002/ecy.4227] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/13/2023] [Revised: 06/27/2023] [Accepted: 10/23/2023] [Indexed: 12/02/2023]
Abstract
Mast seeding is the episodic, massive production of plant seeds synchronized over large areas. The resulting superabundance of seeds represents a resource pulse that can profoundly affect animal populations across trophic levels. Following years of high seed production, the abundance of both seed consumers and their predators increase. Higher predator abundance leads to increased predation pressure across the trophic web, impacting nonseed consumers such as the wood warbler Phylloscopus sibilatrix through increased nest predation after tree mast years. Over the past 30 years, the frequency of tree seed masts has increased, while wood warbler populations have declined in several regions of Europe. We hypothesized that increasing mast frequencies may have contributed to the observed population declines by creating suboptimal breeding conditions in years after masting. We measured reproductive output in four study areas in central Europe, which was between 0.61 and 1.24 fledglings lower in the years following masting than nonmasting. For each study area, we used matrix population models to predict population trends based on the estimated reproductive output and the local mast frequencies. We then compared the predicted with the observed population trends to assess if the frequency of mast years had contributed to the population dynamics. In Wielkopolska National Park (PL) and Hessen (DE), masting occurred on average only every 4 years and populations were stable or nearly so, whereas in Jura (CH) and Białowieża National Park (PL), masting occurred every 2 and 2.5 years, respectively, and populations were declining. The simple matrix population models predicted the relative difference among local population trends over the past 10-20 years well, suggesting that the masting frequency may partly explain regional variation in population trends. Simulations suggest that further increases in mast frequency will lead to further declines in wood warbler populations. We show that changes in a natural process, such as mast seeding, may contribute to the decline in animal populations through cascading effects.
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Affiliation(s)
- Nino Maag
- Swiss Ornithological Institute, Sempach, Switzerland
| | | | - Jakub Szymkowiak
- Population Ecology Research Unit, Faculty of Biology, Adam Mickiewicz University, Poznań, Poland
- Forest Biology Center, Faculty of Biology, Adam Mickiewicz University, Poznań, Poland
| | - Natalia Hałas
- Population Ecology Research Unit, Faculty of Biology, Adam Mickiewicz University, Poznań, Poland
| | - Marta Maziarz
- Museum and Institute of Zoology, Polish Academy of Sciences, Warsaw, Poland
| | | | | | | | | | - Martin Flade
- Schorfheide-Chorin Biosphere Reserve, Angermünde, Germany
| | - Daniel Scherrer
- Swiss Federal Research Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | | | - Michael Riess
- Department of Biology, University of Marburg, Marburg, Germany
| | - Pablo Stelbrink
- Department of Biology, University of Marburg, Marburg, Germany
| | - Gilberto Pasinelli
- Swiss Ornithological Institute, Sempach, Switzerland
- Department of Evolutionary Biology and Environmental Studies, University of Zürich, Zürich, Switzerland
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40
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Ferreira D, San‐Jose LM, Roulin A, Gaigher A, Fumagalli L. Limited associations between MHC diversity and reproductive success in a bird species with biparental care. Ecol Evol 2024; 14:e10950. [PMID: 38384825 PMCID: PMC10879840 DOI: 10.1002/ece3.10950] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2023] [Accepted: 12/13/2023] [Indexed: 02/23/2024] Open
Abstract
The selective pressure from pathogens on individuals can have direct consequences on reproduction. Genes from the major histocompatibility complex (MHC) are central to the vertebrate adaptive immune system and pathogen resistance. In species with biparental care, each sex has distinct reproductive roles and levels of investment, and due to a trade-off with immunity, one can expect different selective regimes acting upon the MHC of each parent. Here, we addressed whether couples combine each other's variation at MHC loci to increase their breeding success. Specifically, we used a 23-year dataset from a barn owl population (Tyto alba) to understand how MHC class Iα and IIβ functional divergence and supertypes of each parent were associated with clutch size and fledging success. We did not detect associations between MHC diversity and supertypes with the clutch size or with the fledging success. In addition, to understand the relative contribution from the MHC of the genetic parents and the social parents, we analyzed the fledging success using only a cross-fostered dataset. We found several associations of weak-to-moderate effect sizes between the father's MHC and fledging success: (i) lower MHC-Iα divergence in the genetic father increases fledging success, which might improve paternal care during incubation, and (ii) one and two MHC-IIβ DAB2 supertypes in the social father decrease and increase, respectively, fledging success, which may affect the paternal care after hatching. Furthermore, fledging success increased when both parents did not carry MHC-IIβ DAB1 supertype 2, which could suggest conditional effects of this supertype. Although our study relied on a substantial dataset, we showed that the associations between MHC diversity and reproductive success remain scarce and of complex interpretation in the barn owl. Moreover, our results highlighted the need to incorporate more than one proxy of reproductive success and several MHC classes to capture more complex associations.
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Affiliation(s)
- Diana Ferreira
- Laboratory for Conservation Biology, Department of Ecology and Evolution, BiophoreUniversity of LausanneLausanneSwitzerland
| | - Luis M. San‐Jose
- Laboratoire Évolution and Diversité Biologique, UMR 5174, CNRSUniversité Toulouse III Paul Sabatier, IRDToulouseFrance
| | - Alexandre Roulin
- Department of Ecology and Evolution, BiophoreUniversity of LausanneLausanneSwitzerland
| | - Arnaud Gaigher
- CIBIO‐InBIO, Research Center in Biodiversity and Genetic ResourcesUniversity of PortoVairãoPortugal
- Research Unit for Evolutionary Immunogenomics, Department of BiologyUniversity of HamburgHamburgGermany
| | - Luca Fumagalli
- Laboratory for Conservation Biology, Department of Ecology and Evolution, BiophoreUniversity of LausanneLausanneSwitzerland
- Swiss Human Institute of Forensic Taphonomy, University Centre of Legal Medicine Lausanne‐GenevaLausanne University Hospital and University of LausanneLausanneSwitzerland
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41
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Toussaint A, Pärtel M, Carmona CP. Contrasting impacts of non-native and threatened species on morphological, life history, and phylogenetic diversity in bird assemblages. Ecol Lett 2024; 27:e14373. [PMID: 38344890 DOI: 10.1111/ele.14373] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2023] [Revised: 12/11/2023] [Accepted: 01/04/2024] [Indexed: 02/15/2024]
Abstract
Human activities have altered the species composition of assemblages through introductions and extinctions, but it remains unclear how those changes can affect the different facets of biodiversity. Here we assessed the impact of changes in species composition on taxonomic, functional, and phylogenetic diversity across 281 bird assemblages worldwide. To provide a more nuanced understanding of functional diversity, we distinguished morphological from life-history traits. We showed that shifts in species composition could trigger a global decline in avian biodiversity due to the high number of potential extinctions. Moreover, these extinctions were not random but unique in terms of function and phylogeny at the regional level. Our findings demonstrated that non-native species cannot compensate for these losses, as they are both morphologically and phylogenetically close to the native fauna. In the context of the ongoing biodiversity crisis, such alterations in the functional and phylogenetic structure of bird assemblages could heighten ecosystem vulnerability.
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Affiliation(s)
- Aurele Toussaint
- Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia
| | - Meelis Pärtel
- Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia
| | - Carlos P Carmona
- Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia
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Abstract
Ghrelin is known to be a feeding stimulatory hormone in mammals, but in birds, in contrast to mammals, the feeding behavior is regulated in inhibitory manners. This is because the neuropeptides associated with the regulation in the brain are different from those in mammals, i.e., it has been shown that, in chickens, a corticotropin-releasing hormone family peptide, urocortin, which is a feeding-inhibitory peptide, is mainly involved in the inhibitory mechanism. However, feeding is also regulated by various neurotransmitters in the brain, and recently, their interaction with the mechanisms underlying feeding inhibition by ghrelin in birds has been intensively studied and clarified. This review summarizes these findings.
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Affiliation(s)
- Hiroyuki Kaiya
- Grandsoul Research Institute for Immunology, Inc., Utano, Uda, Nara 633-2221, Japan,
- Faculty of Science, University of Toyama, Toyama, Toyama 930-8555, Japan
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Sonne J, Rahbek C. Idiosyncratic patterns of local species richness and turnover define global biodiversity hotspots. Proc Natl Acad Sci U S A 2024; 121:e2313106121. [PMID: 38190521 PMCID: PMC10801871 DOI: 10.1073/pnas.2313106121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Accepted: 11/28/2023] [Indexed: 01/10/2024] Open
Abstract
Tropical mountains are global biodiversity hotspots, owing to a combination of high local species richness and turnover in species composition. Typically, the highest local richness and turnover levels are implicitly assumed to converge in the same mountain regions, resulting in extraordinary species richness at regional to global scales. We investigated this untested assumption using high-resolution distribution data for all 9,788 bird species found in 134 mountain regions worldwide. Contrary to expectations, the mountain regions with the highest local richness differed from those with the highest species turnover. This finding reflects dissimilarities in the regions' climates and habitat compositions. Forest habitats and humid tropical climates characterize the mountain regions with the highest local richness. In contrast, mountain regions with the highest turnover are generally colder with drier climates and have mostly open habitat types. The highest local species richness and turnover levels globally converge in only a few mountain regions with the greatest climate volumes and topographic heterogeneity, resulting in the most prominent global hotspots for avian biodiversity. These results underline that species-richness hotspots in tropical mountains arise from idiosyncratic levels of local species richness and turnover, a pattern that traditional analyses of overall regional species richness do not detect.
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Affiliation(s)
- Jesper Sonne
- Center for Global Mountain Biodiversity, Globe Institute, University of Copenhagen, Copenhagen2100, Denmark
| | - Carsten Rahbek
- Center for Global Mountain Biodiversity, Globe Institute, University of Copenhagen, Copenhagen2100, Denmark
- Center for Macroecology, Evolution and Climate, Globe Institute, University of Copenhagen, Copenhagen Ø2100, Denmark
- Department of Life Sciences, Imperial College London, AscotSL5 7PY, United Kingdom
- Danish Institute for Advanced Study, University of Southern Denmark, Odense M5230, Denmark
- Institute of Ecology, Peking University, Beijing100871, China
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Hauber ME, Nagy J, Sheard C, Antonson ND, Street SE, Healy SD, Lala KN, Mainwaring MC. Nest architecture influences host use by avian brood parasites and is shaped by coevolutionary dynamics. Proc Biol Sci 2024; 291:20231734. [PMID: 38196369 PMCID: PMC10777141 DOI: 10.1098/rspb.2023.1734] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2023] [Accepted: 11/27/2023] [Indexed: 01/11/2024] Open
Abstract
Brood (social) parasites and their hosts exhibit a wide range of adaptations and counter-adaptations as part of their ongoing coevolutionary arms races. Obligate avian brood parasites are expected to use potential host species with more easily accessible nests, while potential hosts are expected to evade parasitism by building more concealed nests that are difficult for parasites to enter and in which to lay eggs. We used phylogenetically informed comparative analyses, a global database of the world's brood parasites, their host species, and the design of avian host and non-host nests (approx. 6200 bird species) to examine first, whether parasites preferentially target host species that build open nests and, second, whether host species that build enclosed nests are more likely to be targeted by specialist parasites. We found that species building more accessible nests are more likely to serve as hosts, while host species with some of the more inaccessible nests are targeted by more specialist brood parasites. Furthermore, evolutionary-transition analyses demonstrate that host species building enclosed nests frequently evolve to become non-hosts. We conclude that nest architecture and the accessibility of nests for parasitism represent a critical stage of the ongoing coevolutionary arms race between avian brood parasites and their hosts.
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Affiliation(s)
- Mark E. Hauber
- Advanced Science Research Center and Program in Psychology, Graduate Center of the City University of New York, 85 St Nicholas Terrace, New York, NY 10031, USA
| | - Jenő Nagy
- HUN-REN-UD Conservation Biology Research Group, Department of Botany, University of Debrecen, Egyetem tér 1, 4032 Debrecen, Hungary
| | - Catherine Sheard
- School of Earth Sciences, University of Bristol, Bristol BS8 1TQ, UK
- School of Biological Sciences, University of Aberdeen, Aberdeen AB24 2TZ, UK
| | - Nicholas D. Antonson
- Department of Ecology, Evolution, and Organismal Biology, Brown University, Providence, RI 02912, USA
| | - Sally E. Street
- Department of Anthropology, Durham University, Durham DH1 3LE, UK
| | - Susan D. Healy
- School of Biology, University of St Andrews, St Andrews KY16 9TH, UK
| | - Kevin N. Lala
- School of Biology, University of St Andrews, St Andrews KY16 9TH, UK
| | - Mark C. Mainwaring
- School of Environmental and Natural Sciences, Bangor University, Bangor LL57 2DG, UK
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45
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Bialas JT, Dylewski Ł, Tobolka M. Brain size mediates the choice of breeding strategy in the red-backed shrike Lanius collurio. Integr Zool 2024. [PMID: 38196090 DOI: 10.1111/1749-4877.12803] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2024]
Abstract
The brain size of vertebrates represents a trade-off between natural selection for enhanced cognitive abilities and the energetic constraints of brain tissue production. Processing information efficiently can confer benefits, but it also entails time costs. Breeding strategies, encompassing timing of breeding onset and nest-site selection, may be related to brain size. In this study, we aim to elucidate the relationship between brain size, breeding timing, nest-site choice, and breeding success in the red-backed shrike Lanius collurio. Our findings revealed that the timing of the first egg-laying date was associated with female head size, with larger-headed females tending to lay eggs later in the breeding season. Additionally, we observed that breeding success was positively correlated with increased nest concealment. However, this relationship was stronger in males with smaller heads. In turn, nest concealment was not related to head size but primarily influenced breeding onset. These results suggest that the choice of breeding strategy may be moderated by brain size, with differences between sexes. Larger-headed females may invest more time in selecting nesting sites, leading to delayed breeding onset, while larger-headed males may compensate for suboptimal nest concealment. Our study sheds light on the intricate interplay between brain size, breeding timing, nest-site preferences, and breeding success in passerine birds, underscoring the potential role of cognitive capacity in shaping individual decision-making processes.
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Affiliation(s)
- Joanna T Bialas
- Department of Zoology, Poznań University of Life Sciences, Poznań, Poland
| | - Łukasz Dylewski
- Department of Zoology, Poznań University of Life Sciences, Poznań, Poland
| | - Marcin Tobolka
- Department of Zoology, Poznań University of Life Sciences, Poznań, Poland
- Konrad Lorenz Institute of Ethology, University of Veterinary Medicine Vienna, Wien, Austria
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46
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Katovich E. Quantifying the Effects of Energy Infrastructure on Bird Populations and Biodiversity. Environ Sci Technol 2024; 58:323-332. [PMID: 38153963 DOI: 10.1021/acs.est.3c03899] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/30/2023]
Abstract
Shale oil and gas production and wind energy generation both expanded rapidly across the United States between 2000 and 2020, raising concerns over impacts on wildlife. I combine longitudinal microdata from the National Audubon Society's Christmas Bird Count with geolocated registries of all wind turbines and shale wells constructed in the contiguous U.S. during this period to estimate the causal effects of these contrasting types of energy infrastructure on bird populations and biodiversity, which are key bellwethers of ecosystem health. Results show that the onset of shale oil and gas production reduces subsequent bird population counts by 15%, even after adjusting for location and year fixed effects, weather, counting effort, and land-use changes. Wind turbines do not have any measurable impact on bird counts. Negative effects of shale are larger when wells are drilled within important bird habitats.
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Affiliation(s)
- Erik Katovich
- Postdoctoral Scholar, Institute of Economics and Econometrics, University of Geneva, 40 Boulevard du Pont-d'Arve, Geneva 1211, Switzerland
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47
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Chaturvedi K, Srivastava A, Malik S, Rani S. The presence/absence of conspecifics modulates the circadian locomotor activity and body mass in spotted munia ( Lonchura punctulata). Chronobiol Int 2024; 41:105-126. [PMID: 38108138 DOI: 10.1080/07420528.2023.2292732] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2023] [Accepted: 12/04/2023] [Indexed: 12/19/2023]
Abstract
Biological clocks regulate the behavior and physiology of animals by tracking the local time using diverse time cues. Social cues are relevant in studying the behavior of gregarious animals, but these cues have not been widely studied in birds. Temporal information for circadian timekeeping is socially communicated through visual, physical, olfactory, and auditory means. We examined the efficacy of pulsatile social interactions on locomotor activity and its associated characteristics such as distribution profile of rest and activity, total counts, activity duration, phase shift in activity onset, and circadian periodicity in spotted munia. Besides, we analyzed the effect of such social interactions on their body mass. Spotted munia exhibited phase shift in the onset of activity when subjected to social isolation, but these cues could not affect their circadian periodicity. In Pair as well as in Group, social isolation led to increased activity and activity duration, and decreased body mass in guests relative to the host bird. Our results suggest that the circadian rhythm of locomotor activity in spotted munia is quite sensitive to socialization and isolation, and isolation is detrimental for the birds. Consistent with these observations, the decline in body mass revealed the physiological consequences of social isolation on spotted munia.
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Affiliation(s)
| | - Amrita Srivastava
- Department of Zoology, University of Lucknow, Lucknow, India
- Department of Biotechnology, Dr. Harisingh Gour Vishwavidyalaya, Sagar, India
| | - Shalie Malik
- Department of Zoology, University of Lucknow, Lucknow, India
| | - Sangeeta Rani
- Department of Zoology, University of Lucknow, Lucknow, India
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Ding C, Newbold T, Ameca EI. Assessing the global vulnerability of dryland birds to heatwaves. Glob Chang Biol 2024; 30:e17136. [PMID: 38273501 DOI: 10.1111/gcb.17136] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Revised: 12/11/2023] [Accepted: 12/19/2023] [Indexed: 01/27/2024]
Abstract
As global average surface temperature increases, extreme climatic events such as heatwaves are becoming more frequent and intense, which can drive biodiversity responses such as rapid population declines and/or shifts in species distributions and even local extirpations. However, the impacts of extreme climatic events are largely ignored in conservation plans. Birds are known to be susceptible to heatwaves, especially in dryland ecosystems. Understanding which birds are most vulnerable to heatwaves, and where these birds occur, can offer a scientific basis for adaptive management and conservation. We assessed the relative vulnerability of 1196 dryland bird species to heatwaves using a trait-based approach. Among them, 888 bird species are estimated to be vulnerable to heatwaves (170 highly vulnerable, eight extremely vulnerable), of which ~91% are currently considered non-threatened by the IUCN, which suggests that many species will likely become newly threatened with intensifying climate change. We identified the top three hotspot areas of heatwave-vulnerable species in Australia (208 species), Southern Africa (125 species) and Eastern Africa (99 species). Populations of vulnerable species recorded in the Living Planet Database were found to be declining significantly faster than those of non-vulnerable species (p = .048) after heatwaves occurred. In contrast, no significant difference in population trends between vulnerable and non-vulnerable species was detected when no heatwave occurred (p = .34). This suggests that our vulnerability framework correctly identified vulnerable species and that heatwaves are already impacting the population trends of these species. Our findings will help prioritize heatwave-vulnerable birds in dryland ecosystems in risk mitigation and adaptation management as the frequency of heatwaves accelerates in the coming decades.
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Affiliation(s)
- Chenchen Ding
- Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, College of Life Sciences, Beijing Normal University, Beijing, China
- Centre for Biodiversity and Environment Research, Department of Genetics, Evolution and Environment, University College London, London, UK
| | - Tim Newbold
- Centre for Biodiversity and Environment Research, Department of Genetics, Evolution and Environment, University College London, London, UK
| | - Eric I Ameca
- Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, College of Life Sciences, Beijing Normal University, Beijing, China
- Climate Change Specialist Group, Species Survival Commission, International Union for Conservation of Nature, Gland, Switzerland
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Muñoz-Zuluaga JE, Monroy-Hurtado JA, Muñoz-Duque JD, Franco-Montoya LN, Tamayo-Arango L. Morphological description of the alimentary canal and adnexal glands in Amazilia tzacatl, Amazilia saucerottei, Amazilia amabilis and Anthrachotorax nigricollis species. Anat Histol Embryol 2024; 53:e12989. [PMID: 37864435 DOI: 10.1111/ahe.12989] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2023] [Revised: 06/22/2023] [Accepted: 10/11/2023] [Indexed: 10/22/2023]
Abstract
The hummingbird family (Trochilidae) includes the smallest and most metabolically active vertebrates. They have a high energy demand because of their extraordinarily high metabolic rates during hovering while looking for food. The morphology of the digestive apparatus is related to the feeding habits of the species. The anatomy and histology of the digestive apparatus in these birds have not been thoroughly described except for their tongue. Therefore, this study aimed to describe the gross anatomy and histology of the alimentary canal and adnexal glands in four species from the hummingbird family: Amazilia tzacatl (n = 2), Amazilia saucerottei (n = 1), Amazilia amabilis (n = 1) and Anthracothorax nigricollis (n = 1). The alimentary canal was found to be very short. The epithelium of the oesophagus and crop showed variable degrees of keratinization and parakeratotic areas as normal conditions. A dorsal crop was observed as a differential characteristic of these birds. Like other birds, the ventricular mucosa in hummingbirds was covered and protected by the cuticle and showed a tunica muscularis constituted by three muscle layers. There was no isthmus between the proventriculus and ventriculus. The intestine presents a well-differentiated duodenum and jejunum. However, no ileum nor caeca were identified. The intestinal villi length, base width, crypt depth and area showed differences among the specimens studied among the small and large intestines. In addition, variations in thickness were observed in the smooth muscle tunica along the intestine. In all the studied species, the liver was composed of two lobes (right and left), and no gall bladder was observed during gross inspection or in histological sections. Finally, the pancreas was observed as a diffused organ forming islets related to all the small intestines. Some anatomical differences were observed among the studied species, mainly concerning Anthracothorax nigricollis. Hummingbirds showed very interesting and distinctive morphological characteristics. Hummingbirds possess unique and intriguing morphological characteristics. Future comparative studies related to the anatomy, histology and function of the digestive apparatus of hummingbirds are required. Expanding our understanding of the digestive morphophysiology in these bird species is crucial. However, it is necessary to conduct more comprehensive studies encompassing a wider range of hummingbird species and including a larger number of individuals to obtain more conclusive findings.
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Affiliation(s)
- John Edisson Muñoz-Zuluaga
- Grupo de Investigación CIBAV, Escuela de Medicina Veterinaria, Facultad de Ciencias Agrarias, Universidad de Antioquia UdeA, Medellin, Colombia
| | - Julián Andrés Monroy-Hurtado
- Grupo de Investigación CIBAV, Escuela de Medicina Veterinaria, Facultad de Ciencias Agrarias, Universidad de Antioquia UdeA, Medellin, Colombia
| | - Julián David Muñoz-Duque
- Grupo de Investigación Quirón, Escuela de Medicina Veterinaria, Facultad de Ciencias Agrarias, Universidad de Antioquia UdeA, Medellin, Colombia
| | - Luz Natalia Franco-Montoya
- Grupo de Investigación CIBAV, Escuela de Medicina Veterinaria, Facultad de Ciencias Agrarias, Universidad de Antioquia UdeA, Medellin, Colombia
| | - Lynda Tamayo-Arango
- Grupo de Investigación CIBAV, Escuela de Medicina Veterinaria, Facultad de Ciencias Agrarias, Universidad de Antioquia UdeA, Medellin, Colombia
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50
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Galván I, Hassasfar A, Adams B, Petruccione F. Isotope effects on radical pair performance in cryptochrome: A new hypothesis for the evolution of animal migration: The quantum biology of migration. Bioessays 2024; 46:e2300152. [PMID: 37888800 DOI: 10.1002/bies.202300152] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Revised: 09/28/2023] [Accepted: 10/10/2023] [Indexed: 10/28/2023]
Abstract
Mechanisms occurring at the atomic level are now known to drive processes essential for life, as revealed by quantum effects on biochemical reactions. Some macroscopic characteristics of organisms may thus show an atomic imprint, which may be transferred across organisms and affect their evolution. This possibility is considered here for the first time, with the aim of elucidating the appearance of an animal innovation with an unclear evolutionary origin: migratory behaviour. This trait may be mediated by a radical pair (RP) mechanism in the retinal flavoprotein cryptochrome, providing essential magnetic orientation for migration. Isotopes may affect the performance of quantum processes through their nuclear spin. Here, we consider a simple model and then apply the standard open quantum system approach to the spin dynamics of cryptochrome RP. We changed the spin quantum number (I) and g-factor of hydrogen and nitrogen isotopes to investigate their effect on RP's yield and magnetic sensitivity. Strong differences arose between isotopes with I = 1 and I = 1/2 in their contribution to cryptochrome magnetic sensitivity, particularly regarding Earth's magnetic field strengths (25-65 µT). In most cases, isotopic substitution improved RP's magnetic sensitivity. Migratory behaviour may thus have been favoured in animals with certain isotopic compositions of cryptochrome.
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Affiliation(s)
- Ismael Galván
- Department of Evolutionary Ecology, National Museum of Natural Sciences, CSIC, Madrid, Spain
| | - Abbas Hassasfar
- Department of Physics, Stellenbosch University, Stellenbosch, South Africa
| | - Betony Adams
- Quantum Research Group, School of Chemistry and Physics, University of KwaZulu-Natal, Durban, South Africa
- The Guy Foundation, Beaminster, Dorset, UK
| | - Francesco Petruccione
- Department of Physics, Stellenbosch University, Stellenbosch, South Africa
- School for Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa
- National Institute for Theoretical and Computational Sciences (NITheCS), Stellenbosch, South Africa
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