Life-history characteristics influence physiological strategies to cope with hypoxia in Himalayan birds

Gene expression plasticity followed by genetic change during colonization in a high-elevation environment

Phenotypic plasticity facilitates organismal invasion of novel environments, and the resultant phenotypic change may later be modified by genetic change, so called 'plasticity first.' Herein, we quantify gene expression plasticity and regulatory adaptation in a wild bird (Eurasian Tree Sparrow) from its original lowland (ancestral stage), experimentally implemented hypoxia acclimation (plastic stage), and colonized highland (colonized stage). Using a group of co-expressed genes from the cardiac and flight muscles, respectively, we demonstrate that gene expression plasticity to hypoxia tolerance is more often reversed than reinforced at the colonized stage. By correlating gene expression change with muscle phenotypes, we show that colonized tree sparrows reduce maladaptive plasticity that largely associated with decreased hypoxia tolerance. Conversely, adaptive plasticity that is congruent with increased hypoxia tolerance is often reinforced in the colonized tree sparrows. Genes displaying large levels of reinforcement or reversion plasticity (i.e. 200% of original level) show greater genetic divergence between ancestral and colonized populations. Overall, our work demonstrates that gene expression plasticity at the initial stage of high-elevation colonization can be reversed or reinforced through selection-driven adaptive modification.

Autumn migration of black-necked crane (Grus nigricollis) on the Qinghai-Tibetan and Yunnan-Guizhou plateaus

Despite previous research efforts, the majority migration routes of the black-necked cranes (Grus nigricollis) have remained veiled. In this study, we utilized satellite telemetry data from 45 cranes between 2015 and 2021 to unveil critical insights. Our results revealed 11 distinct autumn migration routes and one sedentary flock, of which eight routes and the sedentary flock were previously undocumented. Our findings highlighted the remarkable diversity in the migration routes of black-necked cranes, especially in terms of migration orientations, spatial-temporal patterns, and altitudinal movement patterns. Cranes breeding on the eastern, northern, and central Qinghai-Tibetan Plateau migrated southward, while those on the northern slopes of the Himalayas migrated eastward, westward, northward, or opted to remain sedentary. Moreover, we expanded the known range of migration distances to 84-1520 km at both ends (excluding sedentary individuals) and identified two long-term (Da Qaidam and Chaka) and one short-term (Gyatong grassland) stopover sites. Furthermore, our study revealed that the breeding colonies in the Qilian Mountains on the northeastern Qinghai-Tibetan Plateau utilized long-term stopover sites before embarking on significant altitude ascent, while other flocks displayed more urgent migration patterns, preferring to roost only at night. By unveiling the near-complete autumn migration routes of black-necked cranes, our research has contributed to discovering the critical habitats and connectivity among various breeding colonies, which is instrumental in developing effective seasonal conservation plans.

Highland adaptation of birds on the Qinghai-Tibet Plateau via gut microbiota

Highland birds evolve multiple adaptive abilities to cope with the harsh environments; however, how they adapt to the high-altitude habitats via the gut microbiota remains understudied. Here we integrated evidences from comparative analysis of gut microbiota to explore the adaptive mechanism of black-necked crane, a typical highland bird in the Qinghai-Tibet Plateau. Firstly, the gut microbiota diversity and function was compared among seven crane species (one high-altitude species and six low-altitude species), and then among three populations of contrasting altitudes for the black-necked crane. Microbiota community diversity in black-necked crane was significantly lower than its low-altitude relatives, but higher microbiota functional diversity was observed in black-necked crane, suggesting that unique bacteria are developed and acquired due to the selection pressure of high-altitude environments. The functional microbial genes differed significantly between the low- and high-altitude black-necked cranes, indicating that altitude significantly impacted microbial communities' composition and structure. Adaptive changes in microbiota diversity and function are observed in response to high-altitude environments. These findings provide us a new insight into the adaptation mechanism to the high-altitude environment for birds via the gut microbiota. KEY POINTS: • The diversity and function of gut microbiota differed significantly between the low- and high-altitude crane species. • Black-necked crane adapts to the high-altitude environment via specific gut microbiota. • Altitude significantly impacted microbial communities' composition and structure.

Exploring the thermal limits of malaria transmission in the western Himalaya

Environmental temperature is a key driver of malaria transmission dynamics. Using detailed temperature records from four sites: low elevation (1800), mid elevation (2200 m), and high elevation (2600-3200 m) in the western Himalaya, we model how temperature regulates parasite development rate (the inverse of the extrinsic incubation period, EIP) in the wild. Using a Briére parametrization of the EIP, combined with Bayesian parameter inference, we study the thermal limits of transmission for avian (Plasmodium relictum) and human Plasmodium parasites (P. vivax and P. falciparum) as well as for two malaria-like avian parasites, Haemoproteus and Leucocytozoon. We demonstrate that temperature conditions can substantially alter the incubation period of parasites at high elevation sites (2600-3200 m) leading to restricted parasite development or long transmission windows. The thermal limits (optimal temperature) for Plasmodium parasites were 15.62-34.92°C (30.04°C) for P. falciparum, 13.51-34.08°C (29.02°C) for P. vivax, 12.56-34.46°C (29.16°C) for P. relictum and for two malaria-like parasites, 12.01-29.48°C (25.16°C) for Haemoproteus spp. and 11.92-29.95°C (25.51°C) for Leucocytozoon spp. We then compare estimates of EIP based on measures of mean temperature versus hourly temperatures to show that EIP days vary in cold versus warm environments. We found that human Plasmodium parasites experience a limited transmission window at 2600 m. In contrast, for avian Plasmodium transmission was not possible between September and March at 2600 m. In addition, temperature conditions suitable for both Haemoproteus and Leucocytozoon transmission were obtained from June to August and in April, at 2600 m. Finally, we use temperature projections from a suite of climate models to predict that by 2040, high elevation sites (~2600 m) will have a temperature range conducive for malaria transmission, albeit with a limited transmission window. Our study highlights the importance of accounting for fine-scale thermal effects in the expansion of the range of the malaria parasite with global climate change.

Variation in insulative feather structure in songbirds replacing each other along a tropical elevation gradient

High‐elevation organisms are expected to evolve physiological adaptations to cope with harsh environmental conditions. Yet, evidence for such adaptive differences, especially compared to closely related lowland taxa occurring along the same elevational gradient, is rare. Revisiting an anecdotal natural history observation by O. Bangs from 1899 and based on new measurements of museum specimens, we confirmed that the high‐elevation hermit wood wren (Henicorhina anachoreta) from the Sierra Nevada de Santa Marta, Colombia, has longer, more insulative feathers on the chest and back, than its lower‐elevation counterpart the grey‐breasted wood wren (H. leucophrys). However, we did not find evidence for the same specializations in subspecies of H. leucophrys that live at high elevations on other elevational gradients in the Colombian Andes, although similar adaptive solutions have arisen in separate mountain systems like the Himalayas. Adaptations in plumage may be associated with the recurrence of elevational species replacements throughout the tropics.

Ecological and environmental predictors of escape among birds on a large tropical island

Abstract

Ecological and environmental traits can influence avian escape behaviour but most data underpinning our current understanding relates to continental and temperate areas and species. We conducted a phylogenetically controlled comparative analysis of flight-initiation distance (FID) against a variety of environmental, behavioural and life history attributes for Sri Lankan birds (202 species; n = 2540). As with other studies, body mass was positively associated with FID, and longer FIDs occurred in areas where human population density was lower. We also found that the effect of human population density was more pronounced in larger birds. Birds that were in groups when approached tended to have longer FIDs. Unlike the findings of other comparative analyses, based mostly on continental, temperate populations, most other ecological variables did not feature in the best models predicting FID (time of year, breeding system, clutch size, habitat, migratory behaviour, development [altricial/precocial], elevation and diet). Thus, some associations (body mass and exposure to humans) may be universal, while others may not manifest themselves among tropical avifaunas. Further tropical datasets are required to confirm truly universal associations of environmental and ecological attributes and escape distances among birds.

Significance statement

Escape responses in birds are influenced by the environment in which they live, the conditions under which they face a threat and their own biological characteristics. The vast majority of our knowledge of avian escape behaviour is derived from continental, temperate species. We examined the environmental and ecological factors that shape flight-initiation distance (FID), the distance at which a bird reacts to an approaching threat (a walking human) by escaping, using 2540 observations of 202 bird species on a large tropical island—Sri Lanka. Several predictors of FIDs in birds are clearly influential for Sri Lankan birds: body mass, human population density and whether the bird is alone or in as group. However, many other putative predictors are not, suggesting that tropical island avifaunas may have different responses to approaching threats compared to their temperate continental counterparts.

Haemosporidian prevalence, parasitaemia and aggregation in relation to avian assemblage life history traits at different elevations

The transmission of vector-borne protozoa such as parasites of the Order Haemosporida is dependent on both biotic and abiotic factors such as host life history traits and environmental conditions. This study aimed to identify the variables that determine haemosporidian prevalence, parasitaemia and aggregation within the context of elevation and avian life history traits in Central Veracruz, Mexico. We sampled 607 birds from 88 species; we used microscopy and the mtDNA cytochrome b gene to detect parasites. We found an overall prevalence of 32.3%. Haemosporidian prevalence was 21.6% in tropical sub-deciduous forest (at sea level), 38% in tropical deciduous forest (265 m above sea level (asl)), 19.4% in montane cloud forest (1630 m asl), and 51.7% in pine-oak forest (2790 m asl). The prevalence of each parasite genus was strongly influenced by elevation (a proxy of habitat type). Plasmodium showed the highest prevalence at low elevation. Haemoproteus increased in prevalence with elevation. Leucocytozoon displayed the highest prevalence at the highest elevation (pine-oak forest). Haemoproteus spp. and Leucocytozoon spp. prevalences were higher in open cup than in closed nests. Haemoproteus prevalence and haemosporidian parasitaemia were lower in solitary birds than birds with pairing and gregarious behavior. Haemosporidian aggregation decreased with elevation, yielding the significantly lowest values at the pine-oak forest. Elevation distribution patterns of prevalence for each genus were similar to those previously reported in other geographical areas (e.g., South America, Europe).

Potential sex-dependent effects of weather on apparent survival of a high-elevation specialist

Mountain ecosystems are inhabited by highly specialised and endemic species which are particularly susceptible to climatic changes. However, the mechanisms by which climate change affects species population dynamics are still largely unknown, particularly for mountain birds. We investigated how weather variables correlate with survival or movement of the white-winged snowfinch Montifringilla nivalis, a specialist of high-elevation habitat. We analysed a 15-year (2003-2017) mark-recapture data set of 671 individuals from the Apennines (Italy), using mark-recapture models. Mark-recapture data allow estimating, forgiven time intervals, the probability that individuals stay in the study area and survive, the so called apparent survival. We estimated annual apparent survival to be around 0.44-0.54 for males and around 0.51-0.64 for females. Variance among years was high (range: 0.2-0.8), particularly for females. Apparent survival was lower in winter compared to summer. Female annual apparent survival was negatively correlated with warm and dry summers, whereas in males these weather variables only weakly correlated with apparent survival. Remarkably, the average apparent survival measured in this study was lower than expected. We suggest that the low apparent survival may be due to recent changes in the environment caused by global warming. Possible, non-exclusive mechanisms that potentially also could explain sexual differential apparent survival act via differential breeding dispersal, hyperthermia, weather-dependent food availability, and weather-dependent trade-off between reproduction and self-maintenance. These results improve our current understanding of the mechanisms driving population dynamics in high-elevation specialist birds, which are particularly at risk due to climate change.

Ecology and Evolution of Blood Oxygen-Carrying Capacity in Birds

Blood oxygen-carrying capacity is one of the important determinants of the amount of oxygen supplied to the tissue per unit time and plays a key role in oxidative metabolism. In wild vertebrates, blood oxygen-carrying capacity is most commonly measured with the total blood hemoglobin concentration (Hb) and hematocrit (Hct), which is the volume percentage of red blood cells in blood. Here, I used published estimates of avian Hb and Hct (nearly 1,000 estimates from 300 species) to examine macroevolutionary patterns in the oxygen-carrying capacity of blood in birds. Phylogenetically informed comparative analysis indicated that blood oxygen-carrying capacity was primarily determined by species distribution (latitude and elevation) and morphological constraints (body mass). I found little support for the effect of life-history components on blood oxygen-carrying capacity except for a positive association of Hct with clutch size. Hb was also positively associated with diving behavior, but I found no effect of migratoriness on either Hb or Hct. Fluctuating selection was identified as the major force shaping the evolution of blood oxygen-carrying capacity. The results offer novel insights into the evolution of Hb and Hct in birds, and they provide a general, phylogenetically robust support for some long-standing hypotheses in avian ecophysiology.

Ecological Limits as the Driver of Bird Species Richness Patterns along the East Himalayan Elevational Gradient

Variation in species richness across environmental gradients results from a combination of historical nonequilibrium processes (time, speciation, extinction) and present-day differences in environmental carrying capacities (i.e., ecological limits affected by species interactions and the abundance and diversity of resources). In a study of bird richness along the subtropical east Himalayan elevational gradient, we test the prediction that species richness patterns are consistent with ecological limits using data on morphology, phylogeny, elevational distribution, and arthropod resources. Species richness peaks at midelevations. Occupied morphological volume is roughly constant from low elevations to midelevations, implying that more species are packed into the same space at midelevations compared with low elevations. However, variance in beak length and differences in beak length between close relatives decline with elevation, which is a consequence of the addition of many small insectivores at midelevations. These patterns are predicted from resource distributions: arthropod size diversity declines from low elevations to midelevations, largely because many more small insects are present at midelevations. Weak correlations of species mean morphological traits with elevation also match predictions based on resources and habitats. Elevational transects in the tropical Andes, New Guinea, and Tanzania similarly show declines in mean arthropod size and mean beak length and, in these cases, likely contribute to declining numbers of insectivorous bird species richness along these gradients. The results imply that conditions for ecological limits are met, although historical nonequilibrium processes are likely to also contribute to the pattern of species richness.

Haematological traits co-vary with migratory status, altitude and energy expenditure: a phylogenetic, comparative analysis

Aerobic capacity is assumed to be a main predictor of workload ability and haematocrit (Hct) and haemoglobin (Hb) have been suggested as key determinants of aerobic performance. Intraspecific studies have reported increases in Hct and Hb in response to increased workload. Furthermore, Hct and Hb vary markedly among individuals and throughout the annual cycle in free-living birds and it has been suggested that this variation reflects adaptive modulation of these traits to meet seasonal changes in energy demands. We used a comparative dataset of haematological traits, measures of metabolic rate (57 species), and life-history traits (160 species) to test several hypotheses for adaptive variation in haematology in relation to migration and altitude. We then extended these general ideas to test relationships between Hct and basal metabolic rate, daily energy expenditure and activity energy expenditure, using the 57 species that we have metabolic rate information for. We found that at the interspecific level, full migrants have higher Hct and Hb than partial migrants and non-migrants, and that altitude is positively correlated with Hb but not Hct. Hct is positively associated with activity energy expenditure (energy spent specifically on costly activities), suggesting that haematological traits could be adaptively modulated based on life-history traits and that Hct is a potential physiological mediator of energetic constraint.

Effects of experimental manipulation of hematocrit on avian flight performance in high- and low-altitude conditions

Despite widely held assumptions that hematocrit (Hct) is a key determinant of aerobic capacity and exercise performance, this relationship has not often been tested rigorously in birds and results to date are mixed. Migration in birds involves high-intensity exercise for long durations at various altitudes. Therefore, it provides a good model system to examine the effect of Hct on flight performance and physiological responses of exercise at high altitude. We treated yellow-rumped warblers (Setophaga coronata) with avian erythropoietin (EPO) and anti-EPO to experimentally manipulate Hct and assessed flight performance at low and high altitudes using a hypobaric wind tunnel. We showed that anti-EPO-treated birds had lower Hct than vehicle- and EPO--treated birds post-treatment. Anti-EPO-treated birds also had marginally lower exercise performance at low altitude, committing a higher number of strikes (mistakes) in the first 30 min of flight. However, anti-EPO-treated birds performed significantly better at high altitude, attaining a higher altitude in a ramped altitude challenge to 3000 m equivalent altitude, and with a longer duration of flight at high altitude. Birds exercising at high altitude showed decreased Hct, increased glucose mobilization and decreased antioxidant capacity, regardless of treatment. In summary, we provide experimental evidence that the relationship between Hct and exercise performance is dependent on altitude. Future studies should investigate whether free-living birds adaptively modulate their Hct, potentially through a combination of erythropoiesis and plasma volume regulation (i.e. hemodilution), based on the altitude they fly at during migratory flight.

Do avian blood parasites influence hypoxia physiology in a high elevation environment?

Background

Montane birds which engage in elevational movements have evolved to cope with fluctuations in environmental hypoxia, through changes in physiological parameters associated with blood oxygen-carrying capacity such as haemoglobin concentration (Hb) and haematocrit (Hct). In particular, elevational migrants which winter at low elevations, encounter varying intensities of avian haemosporidian parasites as they traverse heterogeneous environments. Whilst high intensity parasite infections lead to anaemia, one can expect that the ability to cope with haemosporidian infections should be a key trait for elevational migrants that must be balanced against reducing the oxygen-carrying capacity of blood in response to high elevation. In this study, we explored the links between environmental hypoxia, migration, and disease ecology by examining natural variation in infections status and intensity of avian haemoporidians across a suite of Himalayan birds with different migratory strategies while controlling for host phylogeny.

Results

We found predictably large variation in haemoglobin levels across the elevational gradient and this pattern was strongly influenced by season and whether birds are elevational migrants. The overall malaria infection intensity declined with elevation whereas Hb and Hct decreased with increase in parasite intensity, suggesting an important role of malaria parasites on hypoxia stressed birds in high elevation environments.

Conclusions

Our results provide a key insight into how physiological measures and sub-clinical infections might affect dynamics of high-elevation bird populations. We suggest a potential impact of avian elevational migration on disease dynamics and exposure to high intensity infections with disease spread in the face of climate change, which will exacerbate hypoxic stress and negative effects of chronic avian malaria infection on survival and reproductive success in wild birds. Future work on chronic parasite infections must consider parasite intensity, rather than relying on infection status alone.

Electronic supplementary material

The online version of this article (10.1186/s12898-018-0171-2) contains supplementary material, which is available to authorized users.

Physiological and ecological implications of ocean deoxygenation for vision in marine organisms

Climate change has induced ocean deoxygenation and exacerbated eutrophication-driven hypoxia in recent decades, affecting the physiology, behaviour and ecology of marine organisms. The high oxygen demand of visual tissues and the known inhibitory effects of hypoxia on human vision raise the questions if and how ocean deoxygenation alters vision in marine organisms. This is particularly important given the rapid loss of oxygen and strong vertical gradients in oxygen concentration in many areas of the ocean. This review evaluates the potential effects of low oxygen (hypoxia) on visual function in marine animals and their implications for marine biota under current and future ocean deoxygenation based on evidence from terrestrial and a few marine organisms. Evolutionary history shows radiation of eye designs during a period of increasing ocean oxygenation. Physiological effects of hypoxia on photoreceptor function and light sensitivity, in combination with morphological changes that may occur throughout ontogeny, have the potential to alter visual behaviour and, subsequently, the ecology of marine organisms, particularly for fish, cephalopods and arthropods with 'fast' vision. Visual responses to hypoxia, including greater light requirements, offer an alternative hypothesis for observed habitat compression and shoaling vertical distributions in visual marine species subject to ocean deoxygenation, which merits further investigation.This article is part of the themed issue 'Ocean ventilation and deoxygenation in a warming world'.