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For: Sachs MS, Geballe AP. Downstream control of upstream open reading frames. Genes Dev 2006;20:915-21. [PMID: 16618802 DOI: 10.1101/gad.1427006] [Citation(s) in RCA: 55] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Number Cited by Other Article(s)
1
Eisenhut P, Marx N, Borsi G, Papež M, Ruggeri C, Baumann M, Borth N. Manipulating gene expression levels in mammalian cell factories: An outline of synthetic molecular toolboxes to achieve multiplexed control. N Biotechnol 2024;79:1-19. [PMID: 38040288 DOI: 10.1016/j.nbt.2023.11.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2023] [Revised: 11/06/2023] [Accepted: 11/26/2023] [Indexed: 12/03/2023]
2
Jian H, Wen S, Liu R, Zhang W, Li Z, Chen W, Zhou Y, Khassanov V, Mahmoud AMA, Wang J, Lyu D. Dynamic Translational Landscape Revealed by Genome-Wide Ribosome Profiling under Drought and Heat Stress in Potato. PLANTS (BASEL, SWITZERLAND) 2023;12:2232. [PMID: 37375858 DOI: 10.3390/plants12122232] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2023] [Revised: 06/02/2023] [Accepted: 06/02/2023] [Indexed: 06/29/2023]
3
Guo R, Yu X, Gregory BD. The identification of conserved sequence features of co-translationally decayed mRNAs and upstream open reading frames in angiosperm transcriptomes. PLANT DIRECT 2023;7:e479. [PMID: 36643787 PMCID: PMC9831718 DOI: 10.1002/pld3.479] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/08/2022] [Revised: 12/19/2022] [Accepted: 12/20/2022] [Indexed: 06/17/2023]
4
Lee HC, Fu CY, Lin CY, Hu JR, Huang TY, Lo KY, Tsai HY, Sheu JC, Tsai HJ. Poly(U)-specific endoribonuclease ENDOU promotes translation of human CHOP mRNA by releasing uORF element-mediated inhibition. EMBO J 2021;40:e104123. [PMID: 33511665 PMCID: PMC8167367 DOI: 10.15252/embj.2019104123] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2019] [Revised: 11/18/2020] [Accepted: 11/30/2020] [Indexed: 12/24/2022]  Open
5
Fang E, Wang X, Wang J, Hu A, Song H, Yang F, Li D, Xiao W, Chen Y, Guo Y, Liu Y, Li H, Huang K, Zheng L, Tong Q. Therapeutic targeting of YY1/MZF1 axis by MZF1-uPEP inhibits aerobic glycolysis and neuroblastoma progression. Am J Cancer Res 2020;10:1555-1571. [PMID: 32042322 PMCID: PMC6993229 DOI: 10.7150/thno.37383] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2019] [Accepted: 10/09/2019] [Indexed: 12/13/2022]  Open
6
Cao Y, Wang Y, Li Y, Yang J, Ma L. The Arabidopsis AGAMOUS 5'-UTR represses downstream gene translation. SCIENCE CHINA. LIFE SCIENCES 2019;62:272-275. [PMID: 30421295 DOI: 10.1007/s11427-018-9383-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/13/2018] [Accepted: 08/20/2018] [Indexed: 10/27/2022]
7
Kim JK, Kim I, Choi K, Choi JH, Kim E, Lee HY, Park J, Kim Yoon S. Poly(rC) binding protein 2 acts as a negative regulator of IRES-mediated translation of Hr mRNA. Exp Mol Med 2018;50:e441. [PMID: 29422543 PMCID: PMC5903819 DOI: 10.1038/emm.2017.262] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2017] [Revised: 08/16/2017] [Accepted: 08/26/2017] [Indexed: 12/21/2022]  Open
8
Kearse MG, Wilusz JE. Non-AUG translation: a new start for protein synthesis in eukaryotes. Genes Dev 2017;31:1717-1731. [PMID: 28982758 PMCID: PMC5666671 DOI: 10.1101/gad.305250.117] [Citation(s) in RCA: 267] [Impact Index Per Article: 33.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
9
Pnrc2 regulates 3'UTR-mediated decay of segmentation clock-associated transcripts during zebrafish segmentation. Dev Biol 2017. [PMID: 28648842 DOI: 10.1016/j.ydbio.2017.06.024] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
10
Schepetilnikov M, Ryabova LA. Auxin Signaling in Regulation of Plant Translation Reinitiation. FRONTIERS IN PLANT SCIENCE 2017;8:1014. [PMID: 28659957 PMCID: PMC5469914 DOI: 10.3389/fpls.2017.01014] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2017] [Accepted: 05/26/2017] [Indexed: 05/03/2023]
11
Cleary JD, Ranum LP. New developments in RAN translation: insights from multiple diseases. Curr Opin Genet Dev 2017;44:125-134. [PMID: 28365506 PMCID: PMC5951168 DOI: 10.1016/j.gde.2017.03.006] [Citation(s) in RCA: 69] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2017] [Revised: 02/28/2017] [Accepted: 03/13/2017] [Indexed: 12/14/2022]
12
Kearse MG, Green KM, Krans A, Rodriguez CM, Linsalata AE, Goldstrohm AC, Todd PK. CGG Repeat-Associated Non-AUG Translation Utilizes a Cap-Dependent Scanning Mechanism of Initiation to Produce Toxic Proteins. Mol Cell 2016;62:314-322. [PMID: 27041225 DOI: 10.1016/j.molcel.2016.02.034] [Citation(s) in RCA: 126] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2015] [Revised: 01/25/2016] [Accepted: 02/26/2016] [Indexed: 02/03/2023]
13
Cammas A, Dubrac A, Morel B, Lamaa A, Touriol C, Teulade-Fichou MP, Prats H, Millevoi S. Stabilization of the G-quadruplex at the VEGF IRES represses cap-independent translation. RNA Biol 2015;12:320-9. [PMID: 25826664 DOI: 10.1080/15476286.2015.1017236] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]  Open
14
Lei L, Shi J, Chen J, Zhang M, Sun S, Xie S, Li X, Zeng B, Peng L, Hauck A, Zhao H, Song W, Fan Z, Lai J. Ribosome profiling reveals dynamic translational landscape in maize seedlings under drought stress. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2015;84:1206-18. [PMID: 26568274 DOI: 10.1111/tpj.13073] [Citation(s) in RCA: 130] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/11/2015] [Revised: 10/30/2015] [Accepted: 11/09/2015] [Indexed: 05/19/2023]
15
Duan K, Sun Y, Zhang X, Zhang T, Zhang W, Zhang J, Wang G, Wang S, Leng L, Li H, Wang N. Identification and characterization of transcript variants of chicken peroxisome proliferator-activated receptor gamma. Poult Sci 2015;94:2516-27. [PMID: 26286997 DOI: 10.3382/ps/pev229] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2015] [Accepted: 07/02/2015] [Indexed: 11/20/2022]  Open
16
Analysis of human upstream open reading frames and impact on gene expression. Hum Genet 2015;134:605-12. [PMID: 25800702 DOI: 10.1007/s00439-015-1544-7] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2014] [Accepted: 03/16/2015] [Indexed: 01/08/2023]
17
Expression of human Hemojuvelin (HJV) is tightly regulated by two upstream open reading frames in HJV mRNA that respond to iron overload in hepatic cells. Mol Cell Biol 2015;35:1376-89. [PMID: 25666510 DOI: 10.1128/mcb.01462-14] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]  Open
18
Hu W, Wang T, Yang Y, Zheng S. CPuORF correlates with miRNA responsive elements on protein evolutionary rates. Biochem Biophys Res Commun 2014;452:66-71. [PMID: 25148940 DOI: 10.1016/j.bbrc.2014.08.050] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2014] [Accepted: 08/11/2014] [Indexed: 10/24/2022]
19
Barbosa C, Romão L. Translation of the human erythropoietin transcript is regulated by an upstream open reading frame in response to hypoxia. RNA (NEW YORK, N.Y.) 2014;20:594-608. [PMID: 24647661 PMCID: PMC3988562 DOI: 10.1261/rna.040915.113] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2013] [Accepted: 01/10/2014] [Indexed: 05/22/2023]
20
Barbosa C, Peixeiro I, Romão L. Gene expression regulation by upstream open reading frames and human disease. PLoS Genet 2013;9:e1003529. [PMID: 23950723 PMCID: PMC3738444 DOI: 10.1371/journal.pgen.1003529] [Citation(s) in RCA: 349] [Impact Index Per Article: 29.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]  Open
21
Ma Y, Li M, Zheng B, Wang N, Gao S, Wang L, Qi Y, Sun Z, Ruan Q. Overlapping transcription structure of human cytomegalovirus UL140 and UL141 genes. J Biosci 2013;38:35-44. [PMID: 23385811 DOI: 10.1007/s12038-012-9293-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
22
Eggert M, Aichinger E, Pfaffl MW, Steinlein OK, Pfob M. Nicotinic acetylcholine receptor subunits α4 and α5 associated with smoking behaviour and lung cancer are regulated by upstream open reading frames. PLoS One 2013;8:e66157. [PMID: 23843950 PMCID: PMC3699600 DOI: 10.1371/journal.pone.0066157] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2013] [Accepted: 05/02/2013] [Indexed: 11/29/2022]  Open
23
Kleene KC. Connecting cis-elements and trans-factors with mechanisms of developmental regulation of mRNA translation in meiotic and haploid mammalian spermatogenic cells. Reproduction 2013;146:R1-19. [DOI: 10.1530/rep-12-0362] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
24
Akimoto C, Sakashita E, Kasashima K, Kuroiwa K, Tominaga K, Hamamoto T, Endo H. Translational repression of the McKusick-Kaufman syndrome transcript by unique upstream open reading frames encoding mitochondrial proteins with alternative polyadenylation sites. Biochim Biophys Acta Gen Subj 2013;1830:2728-38. [PMID: 23671934 DOI: 10.1016/j.bbagen.2012.12.010] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
25
Nguyen HL, Yang X, Omiecinski CJ. Expression of a novel mRNA transcript for human microsomal epoxide hydrolase (EPHX1) is regulated by short open reading frames within its 5'-untranslated region. RNA (NEW YORK, N.Y.) 2013;19:752-66. [PMID: 23564882 PMCID: PMC3683910 DOI: 10.1261/rna.037036.112] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
26
Schepetilnikov M, Dimitrova M, Mancera-Martínez E, Geldreich A, Keller M, Ryabova LA. TOR and S6K1 promote translation reinitiation of uORF-containing mRNAs via phosphorylation of eIF3h. EMBO J 2013;32:1087-102. [PMID: 23524850 DOI: 10.1038/emboj.2013.61] [Citation(s) in RCA: 214] [Impact Index Per Article: 17.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2013] [Accepted: 02/15/2013] [Indexed: 11/09/2022]  Open
27
Noise-mean relationship in mutated promoters. Genome Res 2012;22:2409-17. [PMID: 22820945 PMCID: PMC3514670 DOI: 10.1101/gr.139378.112] [Citation(s) in RCA: 118] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
28
The arginine attenuator peptide interferes with the ribosome peptidyl transferase center. Mol Cell Biol 2012;32:2396-406. [PMID: 22508989 DOI: 10.1128/mcb.00136-12] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
29
Perez-Leal O, Barrero CA, Clarkson AB, Casero RA, Merali S. Polyamine-regulated translation of spermidine/spermine-N1-acetyltransferase. Mol Cell Biol 2012;32:1453-67. [PMID: 22354986 PMCID: PMC3318587 DOI: 10.1128/mcb.06444-11] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2011] [Accepted: 02/09/2012] [Indexed: 01/08/2023]  Open
30
Chen JM, Férec C, Cooper DN. Revealing the human mutome. Clin Genet 2011;78:310-20. [PMID: 20569258 DOI: 10.1111/j.1399-0004.2010.01474.x] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
31
McGlincy NJ, Tan LY, Paul N, Zavolan M, Lilley KS, Smith CWJ. Expression proteomics of UPF1 knockdown in HeLa cells reveals autoregulation of hnRNP A2/B1 mediated by alternative splicing resulting in nonsense-mediated mRNA decay. BMC Genomics 2010;11:565. [PMID: 20946641 PMCID: PMC3091714 DOI: 10.1186/1471-2164-11-565] [Citation(s) in RCA: 58] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2010] [Accepted: 10/14/2010] [Indexed: 02/07/2023]  Open
32
Spevak CC, Ivanov IP, Sachs MS. Sequence requirements for ribosome stalling by the arginine attenuator peptide. J Biol Chem 2010;285:40933-42. [PMID: 20884617 DOI: 10.1074/jbc.m110.164152] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
33
Bagarova J, Chowdhury TA, Kimura M, Kleene KC. Identification of elements in the Smcp 5' and 3' UTR that repress translation and promote the formation of heavy inactive mRNPs in spermatids by analysis of mutations in transgenic mice. Reproduction 2010;140:853-64. [PMID: 20876225 DOI: 10.1530/rep-10-0323] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
34
Zhou F, Roy B, von Arnim AG. Translation reinitiation and development are compromised in similar ways by mutations in translation initiation factor eIF3h and the ribosomal protein RPL24. BMC PLANT BIOLOGY 2010;10:193. [PMID: 20799971 PMCID: PMC3020687 DOI: 10.1186/1471-2229-10-193] [Citation(s) in RCA: 60] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/08/2010] [Accepted: 08/27/2010] [Indexed: 05/19/2023]
35
Lo JH, Chen TT. CCAAT/enhancer binding protein beta2 is involved in growth hormone-regulated insulin-like growth factor-II gene expression in the liver of rainbow trout (Oncorhynchus mykiss). Endocrinology 2010;151:2128-39. [PMID: 20228168 DOI: 10.1210/en.2009-0960] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
36
Zhao C, Datta S, Mandal P, Xu S, Hamilton T. Stress-sensitive regulation of IFRD1 mRNA decay is mediated by an upstream open reading frame. J Biol Chem 2010;285:8552-8562. [PMID: 20080976 PMCID: PMC2838277 DOI: 10.1074/jbc.m109.070920] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2009] [Revised: 01/14/2010] [Indexed: 01/19/2023]  Open
37
The structure of the 5′-untranslated region of mammalian poly(A) polymerase-α mRNA suggests a mechanism of translational regulation. Mol Cell Biochem 2010;340:91-6. [DOI: 10.1007/s11010-010-0405-x] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2009] [Accepted: 02/04/2010] [Indexed: 11/25/2022]
38
Watanabe Y, Ohtaki N, Hayashi Y, Ikuta K, Tomonaga K. Autogenous translational regulation of the Borna disease virus negative control factor X from polycistronic mRNA using host RNA helicases. PLoS Pathog 2009;5:e1000654. [PMID: 19893625 PMCID: PMC2766071 DOI: 10.1371/journal.ppat.1000654] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2009] [Accepted: 10/13/2009] [Indexed: 11/24/2022]  Open
39
Nyikó T, Sonkoly B, Mérai Z, Benkovics AH, Silhavy D. Plant upstream ORFs can trigger nonsense-mediated mRNA decay in a size-dependent manner. PLANT MOLECULAR BIOLOGY 2009;71:367-78. [PMID: 19653106 DOI: 10.1007/s11103-009-9528-4] [Citation(s) in RCA: 80] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2009] [Accepted: 07/13/2009] [Indexed: 05/02/2023]
40
Kistler WS, Horvath GC, Dasgupta A, Kistler MK. Differential expression of Rfx1-4 during mouse spermatogenesis. Gene Expr Patterns 2009;9:515-9. [PMID: 19596083 PMCID: PMC2761754 DOI: 10.1016/j.gep.2009.07.004] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2009] [Revised: 07/02/2009] [Accepted: 07/02/2009] [Indexed: 11/17/2022]
41
Cai LQ, Wang PG, Gao M, Lu WS, Xu SX, Fang QY, Zhou WM, Lin D, Du WH, Zhang SM, Yang S, Zhang XJ. A novel U2HR non-synonymous mutation in a Chinese patient with Marie Unna Hereditary Hypotrichosis. J Dermatol Sci 2009;55:125-7. [DOI: 10.1016/j.jdermsci.2009.04.009] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2009] [Revised: 04/23/2009] [Accepted: 04/30/2009] [Indexed: 10/20/2022]
42
Halbeisen RE, Gerber AP. Stress-dependent coordination of transcriptome and translatome in yeast. PLoS Biol 2009;7:e1000105. [PMID: 19419242 PMCID: PMC2675909 DOI: 10.1371/journal.pbio.1000105] [Citation(s) in RCA: 103] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2008] [Accepted: 03/23/2009] [Indexed: 01/10/2023]  Open
43
Song KY, Kim CS, Hwang CK, Choi HS, Law PY, Wei LN, Loh HH. uAUG-mediated translational initiations are responsible for human mu opioid receptor gene expression. J Cell Mol Med 2009;14:1113-24. [PMID: 19438807 PMCID: PMC3822748 DOI: 10.1111/j.1582-4934.2009.00734.x] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]  Open
44
Lee YY, Cevallos RC, Jan E. An upstream open reading frame regulates translation of GADD34 during cellular stresses that induce eIF2alpha phosphorylation. J Biol Chem 2009;284:6661-73. [PMID: 19131336 DOI: 10.1074/jbc.m806735200] [Citation(s) in RCA: 186] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
45
Lawless C, Pearson RD, Selley JN, Smirnova JB, Grant CM, Ashe MP, Pavitt GD, Hubbard SJ. Upstream sequence elements direct post-transcriptional regulation of gene expression under stress conditions in yeast. BMC Genomics 2009;10:7. [PMID: 19128476 PMCID: PMC2649001 DOI: 10.1186/1471-2164-10-7] [Citation(s) in RCA: 78] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2008] [Accepted: 01/07/2009] [Indexed: 01/01/2023]  Open
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Wen Y, Liu Y, Xu Y, Zhao Y, Hua R, Wang K, Sun M, Li Y, Yang S, Zhang XJ, Kruse R, Cichon S, Betz RC, Nöthen MM, van Steensel MAM, van Geel M, Steijlen PM, Hohl D, Huber M, Dunnill GS, Kennedy C, Messenger A, Munro CS, Terrinoni A, Hovnanian A, Bodemer C, de Prost Y, Paller AS, Irvine AD, Sinclair R, Green J, Shang D, Liu Q, Luo Y, Jiang L, Chen HD, Lo WHY, McLean WHI, He CD, Zhang X. Loss-of-function mutations of an inhibitory upstream ORF in the human hairless transcript cause Marie Unna hereditary hypotrichosis. Nat Genet 2009;41:228-33. [PMID: 19122663 DOI: 10.1038/ng.276] [Citation(s) in RCA: 142] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2008] [Accepted: 10/14/2008] [Indexed: 11/09/2022]
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Karagyozov L, Böhmer F. Conservation of the Upstream Augs and Orfs in the Human and Mouse 5' Untranslated Region of the Mrnas for Protein Tyrosine Phosphatases. BIOTECHNOL BIOTEC EQ 2009. [DOI: 10.1080/13102818.2009.10818462] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]  Open
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Diverse RNA-binding proteins interact with functionally related sets of RNAs, suggesting an extensive regulatory system. PLoS Biol 2008;6:e255. [PMID: 18959479 PMCID: PMC2573929 DOI: 10.1371/journal.pbio.0060255] [Citation(s) in RCA: 482] [Impact Index Per Article: 28.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2008] [Accepted: 09/11/2008] [Indexed: 11/19/2022]  Open
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Youngman EM, McDonald ME, Green R. Peptide release on the ribosome: mechanism and implications for translational control. Annu Rev Microbiol 2008;62:353-73. [PMID: 18544041 DOI: 10.1146/annurev.micro.61.080706.093323] [Citation(s) in RCA: 77] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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uORFs with unusual translational start codons autoregulate expression of eukaryotic ornithine decarboxylase homologs. Proc Natl Acad Sci U S A 2008;105:10079-84. [PMID: 18626014 DOI: 10.1073/pnas.0801590105] [Citation(s) in RCA: 81] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]  Open
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