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Faini A, Arsac LM, Deschodt-Arsac V, Castiglioni P. Multifractal Multiscale Analysis of Human Movements during Cognitive Tasks. ENTROPY (BASEL, SWITZERLAND) 2024; 26:148. [PMID: 38392403 PMCID: PMC10888086 DOI: 10.3390/e26020148] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2023] [Revised: 01/23/2024] [Accepted: 02/05/2024] [Indexed: 02/24/2024]
Abstract
Continuous adaptations of the movement system to changing environments or task demands rely on superposed fractal processes exhibiting power laws, that is, multifractality. The estimators of the multifractal spectrum potentially reflect the adaptive use of perception, cognition, and action. To observe time-specific behavior in multifractal dynamics, a multiscale multifractal analysis based on DFA (MFMS-DFA) has been recently proposed and applied to cardiovascular dynamics. Here we aimed at evaluating whether MFMS-DFA allows identifying multiscale structures in the dynamics of human movements. Thirty-six (12 females) participants pedaled freely, after a metronomic initiation of the cadence at 60 rpm, against a light workload for 10 min: in reference to cycling (C), cycling while playing "Tetris" on a computer, alone (CT) or collaboratively (CTC) with another pedaling participant. Pedal revolution periods (PRP) series were examined with MFMS-DFA and compared to linearized surrogates, which attested to a presence of multifractality at almost all scales. A marked alteration in multifractality when playing Tetris was evidenced at two scales, τ ≈ 16 and τ ≈ 64 s, yet less marked at τ ≈ 16 s when playing collaboratively. Playing Tetris in collaboration attenuated these alterations, especially in the best Tetris players. This observation suggests the high sensitivity to cognitive demand of MFMS-DFA estimators, extending to the assessment of skill/demand interplay from individual behavior. So, by identifying scale-dependent multifractal structures in movement dynamics, MFMS-DFA has obvious potential for examining brain-movement coordinative structures, likely with sufficient sensitivity to find echo in diagnosing disorders and monitoring the progress of diseases that affect cognition and movement control.
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Affiliation(s)
- Andrea Faini
- Department of Cardiovascular, Neural and Metabolic Sciences, Istituto Auxologico Italiano, IRCCS, 20149 Milan, Italy
- Department of Electronics Information and Bioengineering, Politecnico di Milano, 20156 Milan, Italy
| | - Laurent M Arsac
- University of Bordeaux, CNRS, Laboratoire IMS, UMR 5218, 33405 Talence, France
| | | | - Paolo Castiglioni
- Department of Biotechnology and Life Sciences (DBSV), University of Insubria, 21100 Varese, Italy
- IRCCS Fondazione Don Carlo Gnocchi ONLUS, 20148 Milan, Italy
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2
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Lyu J, Shi W, Zhang C, Yeh CH. A Novel Sleep Staging Method Based on EEG and ECG Multimodal Features Combination. IEEE Trans Neural Syst Rehabil Eng 2023; 31:4073-4084. [PMID: 37819827 DOI: 10.1109/tnsre.2023.3323892] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/13/2023]
Abstract
Accurate sleep staging evaluates the quality of sleep, supporting the clinical diagnosis and intervention of sleep disorders and related diseases. Although previous attempts to classify sleep stages have achieved high classification performance, little attention has been paid to integrating the rich information in brain and heart dynamics during sleep for sleep staging. In this study, we propose a generalized EEG and ECG multimodal feature combination to classify sleep stages with high efficiency and accuracy. Briefly, a hybrid features combination in terms of multiscale entropy and intrinsic mode function are used to reflect nonlinear dynamics in multichannel EEGs, along with heart rate variability measures over time/frequency domains, and sample entropy across scales are applied for ECGs. For both the max-relevance and min-redundancy method and principal component analysis were used for dimensionality reduction. The selected features were classified by four traditional machine learning classifiers. Macro-F1 score, macro-geometric mean, and Cohen kappa value are adopted to evaluate the classification performance of each class in an imbalanced dataset. Experimental results show that EEG features contribute more to wake stage classification while ECG features contribute more to deep sleep stages. The proposed combination achieves the highest accuracy of 84.3% and the highest kappa value of 0.794 on the support vector machine in the ISRUC-S3 dataset, suggesting the proposed multimodal features combination is promising in accuracy and efficiency compared to other state-of-the-art methods.
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Ma YJX, Zschocke J, Glos M, Kluge M, Penzel T, Kantelhardt JW, Bartsch RP. Automatic sleep-stage classification of heart rate and actigraphy data using deep and transfer learning approaches. Comput Biol Med 2023; 163:107193. [PMID: 37421734 DOI: 10.1016/j.compbiomed.2023.107193] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2023] [Revised: 06/01/2023] [Accepted: 06/19/2023] [Indexed: 07/10/2023]
Abstract
Manual sleep-stage scoring based on full-night polysomnography data recorded in a sleep lab has been the gold standard of clinical sleep medicine. This costly and time-consuming approach is unfit for long-term studies as well as assessment of sleep on a population level. With the vast amount of physiological data becoming available from wrist-worn devices, deep learning techniques provide an opportunity for fast and reliable automatic sleep-stage classification tasks. However, training a deep neural network requires large annotated sleep databases, which are not available for long-term epidemiological studies. In this paper, we introduce an end-to-end temporal convolutional neural network able to automatically score sleep stages from raw heartbeat RR interval (RRI) and wrist actigraphy data. Moreover, a transfer learning approach enables the training of the network on a large public database (Sleep Heart Health Study, SHHS) and its subsequent application to a much smaller database recorded by a wristband device. The transfer learning significantly shortens training time and improves sleep-scoring accuracy from 68.9% to 73.8% and inter-rater reliability (Cohen's kappa) from 0.51 to 0.59. We also found that for the SHHS database, automatic sleep-scoring accuracy using deep learning shows a logarithmic relationship with the training size. Although deep learning approaches for automatic sleep scoring are not yet comparable to the inter-rater reliability among sleep technicians, performance is expected to significantly improve in the near future when more large public databases become available. We anticipate those deep learning techniques, when combined with our transfer learning approach, will leverage automatic sleep scoring of physiological data from wearable devices and enable the investigation of sleep in large cohort studies.
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Affiliation(s)
- Yaopeng J X Ma
- Department of Physics, Bar-Ilan University, Ramat Gan, Israel.
| | - Johannes Zschocke
- Institute of Medical Epidemiology, Biometrics and Informatics (IMEBI), Interdisciplinary Center for Health Sciences, Martin-Luther-University Halle-Wittenberg, Halle (Saale), Germany; Institute of Physics, Martin-Luther University Halle-Wittenberg, Halle (Saale), Germany
| | - Martin Glos
- Interdisciplinary Sleep Medicine Center, Charité - Universitätsmedizin Berlin, Berlin, Germany
| | - Maria Kluge
- Interdisciplinary Sleep Medicine Center, Charité - Universitätsmedizin Berlin, Berlin, Germany
| | - Thomas Penzel
- Interdisciplinary Sleep Medicine Center, Charité - Universitätsmedizin Berlin, Berlin, Germany
| | - Jan W Kantelhardt
- Institute of Physics, Martin-Luther University Halle-Wittenberg, Halle (Saale), Germany
| | - Ronny P Bartsch
- Department of Physics, Bar-Ilan University, Ramat Gan, Israel.
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Bărbulescu A. Fractal Characterization of the Mass Loss of Bronze by Erosion-Corrosion in Seawater. MATERIALS (BASEL, SWITZERLAND) 2023; 16:ma16103877. [PMID: 37241504 DOI: 10.3390/ma16103877] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2023] [Revised: 05/15/2023] [Accepted: 05/19/2023] [Indexed: 05/28/2023]
Abstract
The fractal approach is one of the nondestructive techniques for analyzing corrosion's effects on different materials. This article utilizes it to analyze the erosion-corrosion produced by cavitation on two types of bronze introduced into an ultrasonic cavitation field to investigate the differences between their behavior in saline water. The aim is to check the hypothesis that the fractal/multifractal measures significantly differ for the studied materials that belong to the same class (bronze) as a step in applying fractal techniques to distinguish between two materials. The study emphasizes the multifractal characteristics of both materials. While the fractal dimensions do not significantly differ, the highest multifractal dimensions correspond to the sample of bronze with Sn.
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Affiliation(s)
- Alina Bărbulescu
- Department of Civil Engineering, Transilvania University of Brașov, 5, Turnului Street, 900152 Brașov, Romania
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Zschocke J, Bartsch RP, Glos M, Penzel T, Mikolajczyk R, Kantelhardt JW. Long- and short-term fluctuations compared for several organ systems across sleep stages. FRONTIERS IN NETWORK PHYSIOLOGY 2022; 2:937130. [PMID: 36926083 PMCID: PMC10013069 DOI: 10.3389/fnetp.2022.937130] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/05/2022] [Accepted: 08/08/2022] [Indexed: 11/13/2022]
Abstract
Some details of cardiovascular and cardio-respiratory regulation and their changes during different sleep stages remain still unknown. In this paper we compared the fluctuations of heart rate, pulse rate, respiration frequency, and pulse transit times as well as EEG alpha-band power on time scales from 6 to 200 s during different sleep stages in order to better understand regulatory pathways. The five considered time series were derived from ECG, photoplethysmogram, nasal air flow, and central electrode EEG measurements from full-night polysomnography recordings of 246 subjects with suspected sleep disorders. We applied detrended fluctuation analysis, distinguishing between short-term (6-16 s) and long-term (50-200 s) correlations, i.e., scaling behavior characterized by the fluctuation exponents α 1 and α 2 related with parasympathetic and sympathetic control, respectively. While heart rate (and pulse rate) are characterized by sex and age-dependent short-term correlations, their long-term correlations exhibit the well-known sleep stage dependence: weak long-term correlations during non-REM sleep and pronounced long-term correlations during REM sleep and wakefulness. In contrast, pulse transit times, which are believed to be mainly affected by blood pressure and arterial stiffness, do not show differences between short-term and long-term exponents. This is in constrast to previous results for blood pressure time series, where α 1 was much larger than α 2, and therefore questions a very close relation between pulse transit times and blood pressure values. Nevertheless, very similar sleep-stage dependent differences are observed for the long-term fluctuation exponent α 2 in all considered signals including EEG alpha-band power. In conclusion, we found that the observed fluctuation exponents are very robust and hardly modified by body mass index, alcohol consumption, smoking, or sleep disorders. The long-term fluctuations of all observed systems seem to be modulated by patterns following sleep stages generated in the brain and thus regulated in a similar manner, while short-term regulations differ between the organ systems. Deviations from the reported dependence in any of the signals should be indicative of problems in the function of the particular organ system or its control mechanisms.
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Affiliation(s)
- Johannes Zschocke
- Institute of Medical Epidemiology, Biometrics and Informatics (IMEBI), Interdisciplinary Center for Health Sciences, Martin-Luther-University Halle-Wittenberg, Halle, Germany
- Institute of Physics, Martin-Luther-University Halle-Wittenberg, Halle, Germany
| | | | - Martin Glos
- Interdisciplinary Sleep Medicine Center, Charité - Universitätsmedizin Berlin, Berlin, Germany
| | - Thomas Penzel
- Interdisciplinary Sleep Medicine Center, Charité - Universitätsmedizin Berlin, Berlin, Germany
| | - Rafael Mikolajczyk
- Institute of Medical Epidemiology, Biometrics and Informatics (IMEBI), Interdisciplinary Center for Health Sciences, Martin-Luther-University Halle-Wittenberg, Halle, Germany
| | - Jan W. Kantelhardt
- Institute of Physics, Martin-Luther-University Halle-Wittenberg, Halle, Germany
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Natural Time Analysis of Global Seismicity. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12157496] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/04/2022]
Abstract
Natural time analysis enables the introduction of an order parameter for seismicity, which is just the variance of natural time χ, κ1=⟨χ2⟩−⟨χ⟩2. During the last years, there has been significant progress in the natural time analysis of seismicity. Milestones in this progress are the identification of clearly distiguishable minima of the fluctuations of the order parameter κ1 of seismicity both in the regional and global scale, the emergence of an interrelation between the time correlations of the earthquake (EQ) magnitude time series and these minima, and the introduction by Turcotte, Rundle and coworkers of EQ nowcasting. Here, we apply all these recent advances in the global seismicity by employing the Global Centroid Moment Tensor (GCMT) catalog. We show that the combination of the above three milestones may provide useful precursory information for the time of occurrence and epicenter location of strong EQs with M≥8.5 in GCMT. This can be achieved with high statistical significance (p-values of the order of 10−5), while the epicentral areas lie within a region covering only 4% of that investigated.
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Multifractal Characterization and Modeling of Blood Pressure Signals. ALGORITHMS 2022. [DOI: 10.3390/a15080259] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
In this paper, a multi-fractal analysis on a diastolic blood pressure signal is conducted. The signal is measured in a time span of circa one day through the multifractal detrended fluctuation analysis framework. The analysis is performed on asymptotic timescales where complex regulating mechanisms play a fundamental role in the blood pressure stability. Given a suitable frequency range and after removing non-stationarities, the blood pressure signal shows interesting scaling properties and a pronounced multifractality imputed to long-range correlations. Finally, a binomial multiplicative model is investigated showing how the analyzed signal can be described by a concise multifractal model with only two parameters.
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Overnight sleeping heart rate variability of Army recruits during a 12-week basic military training course. Eur J Appl Physiol 2022; 122:2135-2144. [PMID: 35833968 PMCID: PMC9381457 DOI: 10.1007/s00421-022-04987-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2021] [Accepted: 06/12/2022] [Indexed: 11/30/2022]
Abstract
Purpose This study aimed to quantify sleeping heart rate (HR) and HR variability (HRV) alongside circulating tumor necrosis factor alpha (TNFα) concentrations during 12-week Basic Military Training (BMT). We hypothesised that, despite a high allostatic load, BMT would increase cardiorespiratory fitness and HRV, while lowering both sleeping HR and TNFα in young healthy recruits. Methods Sixty-three recruits (18–43 years) undertook ≥ 2 overnight cardiac frequency recordings in weeks 1, 8 and 12 of BMT with 4 h of beat-to-beat HR collected between 00:00 and 06:00 h on each night. Beat-to-beat data were used to derive HR and HRV metrics which were analysed as weekly averages (totalling 8 h). A fasted morning blood sample was collected in the equivalent weeks for the measurement of circulating TNFα concentrations and predicted VO2max was assessed in weeks 2 and 8. Results Predicted VO2max was significantly increased at week 8 (+ 3.3 ± 2.6 mL kg−1 min−1; p < 0.001). Sleeping HR (wk1, 63 ± 7 b min−1) was progressively reduced throughout BMT (wk8, 58 ± 6; wk12, 55 ± 6 b min−1; p < 0.01). Sleeping HRV reflected by the root mean square of successive differences (RMSSD; wk1, 86 ± 50 ms) was progressively increased (wk8, 98 ± 50; wk12, 106 ± 52 ms; p < 0.01). Fasted circulating TNFα (wk1, 9.1 ± 2.8 pg/mL) remained unchanged at wk8 (8.9 ± 2.5 pg/mL; p = 0.79) but were significantly reduced at wk12 (8.0 ± 2.4 pg/mL; p < 0.01). Conclusion Increased predicted VO2max, HRV and reduced HR during overnight sleep are reflective of typical cardiorespiratory endurance training responses. These results indicate that recruits are achieving cardiovascular health benefits despite the high allostatic load associated with the 12-week BMT.
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Ma Y, He X, Wu R, Shen C. Spatial Distribution of Multi-Fractal Scaling Behaviours of Atmospheric XCO 2 Concentration Time Series during 2010-2018 over China. ENTROPY 2022; 24:e24060817. [PMID: 35741538 PMCID: PMC9222844 DOI: 10.3390/e24060817] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/26/2022] [Revised: 05/27/2022] [Accepted: 06/09/2022] [Indexed: 11/16/2022]
Abstract
Exploring the spatial distribution of the multi-fractal scaling behaviours in atmospheric CO2 concentration time series is useful for understanding the dynamic mechanisms of carbon emission and absorption. In this work, we utilise a well-established multi-fractal detrended fluctuation analysis to examine the multi-fractal scaling behaviour of a column-averaged dry-air mole fraction of carbon dioxide (XCO2) concentration time series over China, and portray the spatial distribution of the multi-fractal scaling behaviour. As XCO2 data values from the Greenhouse Gases Observing Satellite (GOSAT) are insufficient, a spatio-temporal thin plate spline interpolation method is applied. The results show that XCO2 concentration records over almost all of China exhibit a multi-fractal nature. Two types of multi-fractal sources are detected. One is long-range correlations, and the other is both long-range correlations and a broad probability density function; these are mainly distributed in southern and northern China, respectively. The atmospheric temperature and carbon emission/absorption are two possible external factors influencing the multi-fractality of the atmospheric XCO2 concentration. Highlight: (1) An XCO2 concentration interpolation is conducted using a spatio-temporal thin plate spline method. (2) The spatial distribution of the multi-fractality of XCO2 concentration over China is shown. (3) Multi-fractal sources and two external factors affecting multi-fractality are analysed.
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Affiliation(s)
- Yiran Ma
- College of Geographical Science, Nanjing Normal University, Nanjing 210046, China; (Y.M.); (X.H.); (R.W.)
- Key Laboratory of Virtual Geographic Environment of Ministry of Education, Nanjing 210046, China
| | - Xinyi He
- College of Geographical Science, Nanjing Normal University, Nanjing 210046, China; (Y.M.); (X.H.); (R.W.)
- Key Laboratory of Virtual Geographic Environment of Ministry of Education, Nanjing 210046, China
| | - Rui Wu
- College of Geographical Science, Nanjing Normal University, Nanjing 210046, China; (Y.M.); (X.H.); (R.W.)
- Key Laboratory of Virtual Geographic Environment of Ministry of Education, Nanjing 210046, China
| | - Chenhua Shen
- College of Geographical Science, Nanjing Normal University, Nanjing 210046, China; (Y.M.); (X.H.); (R.W.)
- Key Laboratory of Virtual Geographic Environment of Ministry of Education, Nanjing 210046, China
- Jiangsu Center for Collaborative Innovation in Geographical Information Resource, Nanjing 210046, China
- Correspondence:
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10
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Practical control performance assessment method using Hurst exponents and crossover phenomena. Comput Chem Eng 2022. [DOI: 10.1016/j.compchemeng.2022.107774] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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11
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Contribution of Cardiorespiratory Coupling to the Irregular Dynamics of the Human Cardiovascular System. MATHEMATICS 2022. [DOI: 10.3390/math10071088] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Irregularity is an important aspect of the cardiovascular system dynamics. Numerical indices of irregularity, such as the largest Lyapunov exponent and the correlation dimension estimated from interbeat interval time series, are early markers of cardiovascular diseases. However, there is no consensus on the origin of irregularity in the cardiovascular system. A common hypothesis suggests the importance of nonlinear bidirectional coupling between the cardiovascular system and the respiratory system for irregularity. Experimental investigations of this theory are severely limited by the capabilities of modern medical equipment and the nonstationarity of real biological systems. Therefore, we studied this problem using a mathematical model of the coupled cardiovascular system and respiratory system. We estimated and compared the numerical indices of complexity for a model simulating the cardiovascular dynamics in healthy subjects and a model with blocked regulation of the respiratory frequency and amplitude, which disturbs the coupling between the studied systems.
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Yan C, Li P, Yang M, Li Y, Li J, Zhang H, Liu C. Entropy Analysis of Heart Rate Variability in Different Sleep Stages. ENTROPY 2022; 24:e24030379. [PMID: 35327890 PMCID: PMC8947316 DOI: 10.3390/e24030379] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/16/2021] [Revised: 03/01/2022] [Accepted: 03/05/2022] [Indexed: 01/02/2023]
Abstract
How the complexity or irregularity of heart rate variability (HRV) changes across different sleep stages and the importance of these features in sleep staging are not fully understood. This study aimed to investigate the complexity or irregularity of the RR interval time series in different sleep stages and explore their values in sleep staging. We performed approximate entropy (ApEn), sample entropy (SampEn), fuzzy entropy (FuzzyEn), distribution entropy (DistEn), conditional entropy (CE), and permutation entropy (PermEn) analyses on RR interval time series extracted from epochs that were constructed based on two methods: (1) 270-s epoch length and (2) 300-s epoch length. To test whether adding the entropy measures can improve the accuracy of sleep staging using linear HRV indices, XGBoost was used to examine the abilities to differentiate among: (i) 5 classes [Wake (W), non-rapid-eye-movement (NREM), which can be divide into 3 sub-stages: stage N1, stage N2, and stage N3, and rapid-eye-movement (REM)]; (ii) 4 classes [W, light sleep (combined N1 and N2), deep sleep (N3), and REM]; and (iii) 3 classes: (W, NREM, and REM). SampEn, FuzzyEn, and CE significantly increased from W to N3 and decreased in REM. DistEn increased from W to N1, decreased in N2, and further decreased in N3; it increased in REM. The average accuracy of the three tasks using linear and entropy features were 42.1%, 59.1%, and 60.8%, respectively, based on 270-s epoch length; all were significantly lower than the performance based on 300-s epoch length (i.e., 54.3%, 63.1%, and 67.5%, respectively). Adding entropy measures to the XGBoost model of linear parameters did not significantly improve the classification performance. However, entropy measures, especially PermEn, DistEn, and FuzzyEn, demonstrated greater importance than most of the linear parameters in the XGBoost model.300-s270-s.
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Affiliation(s)
- Chang Yan
- School of Instrument Science and Engineering, Southeast University, Nanjing 210096, China; (M.Y.); (Y.L.); (J.L.)
- Correspondence: (C.Y.); (C.L.)
| | - Peng Li
- Division of Sleep and Circadian Disorders, Brigham and Women’s Hospital, Harvard Medical School, Boston, MA 02115, USA;
| | - Meicheng Yang
- School of Instrument Science and Engineering, Southeast University, Nanjing 210096, China; (M.Y.); (Y.L.); (J.L.)
| | - Yang Li
- School of Instrument Science and Engineering, Southeast University, Nanjing 210096, China; (M.Y.); (Y.L.); (J.L.)
| | - Jianqing Li
- School of Instrument Science and Engineering, Southeast University, Nanjing 210096, China; (M.Y.); (Y.L.); (J.L.)
| | - Hongxing Zhang
- State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences, Beijing Institute of Lifeomics, Beijing 102206, China;
| | - Chengyu Liu
- School of Instrument Science and Engineering, Southeast University, Nanjing 210096, China; (M.Y.); (Y.L.); (J.L.)
- Correspondence: (C.Y.); (C.L.)
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Oh G. Multifractal analysis of social media use in financial markets. THE JOURNAL OF THE KOREAN PHYSICAL SOCIETY 2022; 80:526-532. [PMID: 35233145 PMCID: PMC8876082 DOI: 10.1007/s40042-022-00448-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/13/2021] [Revised: 01/27/2022] [Accepted: 01/27/2022] [Indexed: 06/14/2023]
Abstract
We analyze the nonlinear properties of social media activity(SMA) using the multifractal detrended fluctuation analysis (MF-DFA) method. Social media data related to the stock market are gathered from social media platforms. Using data on over 2000 firms in the Korean stock market for 2018-2020, we study social media activity and its differences to evaluate associated nonlinear and statistical properties. We find that the cumulative distribution function of SMA follows a stretched exponential distribution with β = 0.85 . The Hurst exponent of SMA for three datasets (2018, 2019, 2020 year) is larger than 0.9, whereas the Hurst exponents of shuffled time series have values of approximately 0.5. In particular, we find a multifractal structure in both SMA and SMA difference results irrespective of the period and degree of multifractality defined as α max - α min , which reaches a maximum value during the COVID-19 pandemic as a financial crisis.
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Affiliation(s)
- Gabjin Oh
- College of Business, Chosun University, Gwangju, 61452 South Korea
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14
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Korom M, Camacho MC, Filippi CA, Licandro R, Moore LA, Dufford A, Zöllei L, Graham AM, Spann M, Howell B, Shultz S, Scheinost D. Dear reviewers: Responses to common reviewer critiques about infant neuroimaging studies. Dev Cogn Neurosci 2022; 53:101055. [PMID: 34974250 PMCID: PMC8733260 DOI: 10.1016/j.dcn.2021.101055] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2021] [Revised: 11/28/2021] [Accepted: 12/26/2021] [Indexed: 01/07/2023] Open
Abstract
The field of adult neuroimaging relies on well-established principles in research design, imaging sequences, processing pipelines, as well as safety and data collection protocols. The field of infant magnetic resonance imaging, by comparison, is a young field with tremendous scientific potential but continuously evolving standards. The present article aims to initiate a constructive dialog between researchers who grapple with the challenges and inherent limitations of a nascent field and reviewers who evaluate their work. We address 20 questions that researchers commonly receive from research ethics boards, grant, and manuscript reviewers related to infant neuroimaging data collection, safety protocols, study planning, imaging sequences, decisions related to software and hardware, and data processing and sharing, while acknowledging both the accomplishments of the field and areas of much needed future advancements. This article reflects the cumulative knowledge of experts in the FIT'NG community and can act as a resource for both researchers and reviewers alike seeking a deeper understanding of the standards and tradeoffs involved in infant neuroimaging.
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Affiliation(s)
- Marta Korom
- Department of Psychological and Brain Sciences, University of Delaware, Newark, DE, USA.
| | - M Catalina Camacho
- Division of Biology and Biomedical Sciences (Neurosciences), Washington University School of Medicine, St. Louis, MO, USA.
| | - Courtney A Filippi
- Emotion and Development Branch, National Institute of Mental Health, Bethesda, MD, USA
| | - Roxane Licandro
- Institute of Visual Computing and Human-Centered Technology, Computer Vision Lab, TU Wien, Vienna, Austria; Department of Biomedical Imaging and Image-guided Therapy, Computational Imaging Research, Medical University of Vienna, Vienna, Austria
| | - Lucille A Moore
- Department of Psychiatry, Oregon Health and Science University, Portland, OR, USA
| | - Alexander Dufford
- Department of Radiology & Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA
| | - Lilla Zöllei
- A.A. Martinos Center for Biomedical Imaging, Department of Radiology, Massachusetts General Hospital, Boston, MA, USA
| | - Alice M Graham
- Department of Psychiatry, Oregon Health and Science University, Portland, OR, USA
| | - Marisa Spann
- Department of Psychiatry, Columbia University Irving Medical Center, New York, NY, USA
| | - Brittany Howell
- Fralin Biomedical Research Institute at Virginia Tech Carilion, Department of Human Development and Family Science, Virginia Polytechnic Institute and State University, Roanoke, VA, USA
| | - Sarah Shultz
- Division of Autism & Department of Pediatrics, Emory University School of Medicine, Atlanta, GA, USA; Marcus Autism Center, Children's Healthcare of Atlanta, Atlanta, GA, USA.
| | - Dustin Scheinost
- Department of Radiology & Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA.
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15
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Günther M, Kantelhardt JW, Bartsch RP. The Reconstruction of Causal Networks in Physiology. FRONTIERS IN NETWORK PHYSIOLOGY 2022; 2:893743. [PMID: 36926108 PMCID: PMC10013035 DOI: 10.3389/fnetp.2022.893743] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/10/2022] [Accepted: 04/06/2022] [Indexed: 11/13/2022]
Abstract
We systematically compare strengths and weaknesses of two methods that can be used to quantify causal links between time series: Granger-causality and Bivariate Phase Rectified Signal Averaging (BPRSA). While a statistical test method for Granger-causality has already been established, we show that BPRSA causality can also be probed with existing statistical tests. Our results indicate that more data or stronger interactions are required for the BPRSA method than for the Granger-causality method to detect an existing link. Furthermore, the Granger-causality method can distinguish direct causal links from indirect links as well as links that arise from a common source, while BPRSA cannot. However, in contrast to Granger-causality, BPRSA is suited for the analysis of non-stationary data. We demonstrate the practicability of the Granger-causality method by applying it to polysomnography data from sleep laboratories. An algorithm is presented, which addresses the stationarity condition of Granger-causality by splitting non-stationary data into shorter segments until they pass a stationarity test. We reconstruct causal networks of heart rate, breathing rate, and EEG amplitude from young healthy subjects, elderly healthy subjects, and subjects with obstructive sleep apnea, a condition that leads to disruption of normal respiration during sleep. These networks exhibit differences not only between different sleep stages, but also between young and elderly healthy subjects on the one hand and subjects with sleep apnea on the other hand. Among these differences are 1) weaker interactions in all groups between heart rate, breathing rate and EEG amplitude during deep sleep, compared to light and REM sleep, 2) a stronger causal link from heart rate to breathing rate but disturbances in respiratory sinus arrhythmia (breathing to heart rate coupling) in subjects with sleep apnea, 3) a stronger causal link from EEG amplitude to breathing rate during REM sleep in subjects with sleep apnea. The Granger-causality method, although initially developed for econometric purposes, can provide a quantitative, testable measure for causality in physiological networks.
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Affiliation(s)
| | - Jan W Kantelhardt
- Institute of Physics, Martin-Luther-University Halle-Wittenberg, Halle, Germany
| | - Ronny P Bartsch
- Department of Physics, Bar-Ilan University, Ramat Gan, Israel
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16
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Borovkova EI, Prokhorov MD, Kiselev AR, Hramkov AN, Mironov SA, Agaltsov MV, Ponomarenko VI, Karavaev AS, Drapkina OM, Penzel T. Directional couplings between the respiration and parasympathetic control of the heart rate during sleep and wakefulness in healthy subjects at different ages. FRONTIERS IN NETWORK PHYSIOLOGY 2022; 2:942700. [PMID: 36926072 PMCID: PMC10013057 DOI: 10.3389/fnetp.2022.942700] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2022] [Accepted: 08/15/2022] [Indexed: 11/13/2022]
Abstract
Cardiorespiratory interactions are important, both for understanding the fundamental processes of functioning of the human body and for development of methods for diagnostics of various pathologies. The properties of cardiorespiratory interaction are determined by the processes of autonomic control of blood circulation, which are modulated by the higher nervous activity. We study the directional couplings between the respiration and the process of parasympathetic control of the heart rate in the awake state and different stages of sleep in 96 healthy subjects from different age groups. The detection of directional couplings is carried out using the method of phase dynamics modeling applied to experimental RR-intervals and the signal of respiration. We reveal the presence of bidirectional couplings between the studied processes in all age groups. Our results show that the coupling from respiration to the process of parasympathetic control of the heart rate is stronger than the coupling in the opposite direction. The difference in the strength of bidirectional couplings between the considered processes is most pronounced in deep sleep.
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Affiliation(s)
- Ekaterina I Borovkova
- National Medical Research Center for Therapy and Preventive Medicine, Moscow, Russia
| | - Mikhail D Prokhorov
- Smart Sleep Laboratory, Saratov State University, Saratov, Russia.,Laboratory of Nonlinear Dynamics Modeling, Saratov Branch of Kotelnikov Institute of Radio Engineering and Electronics of Russian Academy of Sciences, Saratov, Russia
| | - Anton R Kiselev
- National Medical Research Center for Therapy and Preventive Medicine, Moscow, Russia.,Institute of Cardiological Research, Saratov State Medical University, Saratov, Russia
| | | | - Sergey A Mironov
- National Medical Research Center for Therapy and Preventive Medicine, Moscow, Russia
| | - Mikhail V Agaltsov
- National Medical Research Center for Therapy and Preventive Medicine, Moscow, Russia
| | - Vladimir I Ponomarenko
- Smart Sleep Laboratory, Saratov State University, Saratov, Russia.,Laboratory of Nonlinear Dynamics Modeling, Saratov Branch of Kotelnikov Institute of Radio Engineering and Electronics of Russian Academy of Sciences, Saratov, Russia
| | - Anatoly S Karavaev
- Smart Sleep Laboratory, Saratov State University, Saratov, Russia.,Laboratory of Nonlinear Dynamics Modeling, Saratov Branch of Kotelnikov Institute of Radio Engineering and Electronics of Russian Academy of Sciences, Saratov, Russia.,Institute of Cardiological Research, Saratov State Medical University, Saratov, Russia
| | - Oksana M Drapkina
- National Medical Research Center for Therapy and Preventive Medicine, Moscow, Russia
| | - Thomas Penzel
- Smart Sleep Laboratory, Saratov State University, Saratov, Russia.,Interdisciplinary Sleep Medicine Center, Charité-Universitätsmedizin Berlin, Berlin, Germany
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17
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Ribeiro M, Monteiro-Santos J, Castro L, Antunes L, Costa-Santos C, Teixeira A, Henriques TS. Non-linear Methods Predominant in Fetal Heart Rate Analysis: A Systematic Review. Front Med (Lausanne) 2021; 8:661226. [PMID: 34917624 PMCID: PMC8669823 DOI: 10.3389/fmed.2021.661226] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2021] [Accepted: 11/04/2021] [Indexed: 12/19/2022] Open
Abstract
The analysis of fetal heart rate variability has served as a scientific and diagnostic tool to quantify cardiac activity fluctuations, being good indicators of fetal well-being. Many mathematical analyses were proposed to evaluate fetal heart rate variability. We focused on non-linear analysis based on concepts of chaos, fractality, and complexity: entropies, compression, fractal analysis, and wavelets. These methods have been successfully applied in the signal processing phase and increase knowledge about cardiovascular dynamics in healthy and pathological fetuses. This review summarizes those methods and investigates how non-linear measures are related to each paper's research objectives. Of the 388 articles obtained in the PubMed/Medline database and of the 421 articles in the Web of Science database, 270 articles were included in the review after all exclusion criteria were applied. While approximate entropy is the most used method in classification papers, in signal processing, the most used non-linear method was Daubechies wavelets. The top five primary research objectives covered by the selected papers were detection of signal processing, hypoxia, maturation or gestational age, intrauterine growth restriction, and fetal distress. This review shows that non-linear indices can be used to assess numerous prenatal conditions. However, they are not yet applied in clinical practice due to some critical concerns. Some studies show that the combination of several linear and non-linear indices would be ideal for improving the analysis of the fetus's well-being. Future studies should narrow the research question so a meta-analysis could be performed, probing the indices' performance.
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Affiliation(s)
- Maria Ribeiro
- Institute for Systems and Computer Engineering, Technology and Science, Porto, Portugal.,Computer Science Department, Faculty of Sciences, University of Porto, Porto, Portugal
| | - João Monteiro-Santos
- Centre for Health Technology and Services Research, Faculty of Medicine University of Porto, Porto, Portugal.,Department of Community Medicine, Information and Health Decision Sciences, Faculty of Medicine, University of Porto, Porto, Portugal
| | - Luísa Castro
- Centre for Health Technology and Services Research, Faculty of Medicine University of Porto, Porto, Portugal.,Department of Community Medicine, Information and Health Decision Sciences, Faculty of Medicine, University of Porto, Porto, Portugal.,School of Health of Polytechnic of Porto, Porto, Portugal
| | - Luís Antunes
- Institute for Systems and Computer Engineering, Technology and Science, Porto, Portugal.,Computer Science Department, Faculty of Sciences, University of Porto, Porto, Portugal
| | - Cristina Costa-Santos
- Centre for Health Technology and Services Research, Faculty of Medicine University of Porto, Porto, Portugal.,Department of Community Medicine, Information and Health Decision Sciences, Faculty of Medicine, University of Porto, Porto, Portugal
| | - Andreia Teixeira
- Centre for Health Technology and Services Research, Faculty of Medicine University of Porto, Porto, Portugal.,Department of Community Medicine, Information and Health Decision Sciences, Faculty of Medicine, University of Porto, Porto, Portugal.,Instituto Politécnico de Viana do Castelo, Viana do Castelo, Portugal
| | - Teresa S Henriques
- Centre for Health Technology and Services Research, Faculty of Medicine University of Porto, Porto, Portugal.,Department of Community Medicine, Information and Health Decision Sciences, Faculty of Medicine, University of Porto, Porto, Portugal
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18
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Relationship between Continuum of Hurst Exponents of Noise-like Time Series and the Cantor Set. ENTROPY 2021; 23:e23111505. [PMID: 34828203 PMCID: PMC8622546 DOI: 10.3390/e23111505] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/20/2021] [Revised: 11/08/2021] [Accepted: 11/10/2021] [Indexed: 11/18/2022]
Abstract
In this paper, we have modified the Detrended Fluctuation Analysis (DFA) using the ternary Cantor set. We propose a modification of the DFA algorithm, Cantor DFA (CDFA), which uses the Cantor set theory of base 3 as a scale for segment sizes in the DFA algorithm. An investigation of the phenomena generated from the proof using real-world time series based on the theory of the Cantor set is also conducted. This new approach helps reduce the overestimation problem of the Hurst exponent of DFA by comparing it with its inverse relationship with α of the Truncated Lévy Flight (TLF). CDFA is also able to correctly predict the memory behavior of time series.
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19
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Nardelli M, Catrambone V, Grandi G, Banfi T, Bruno RM, Scilingo EP, Faraguna U, Valenza G. Activation of brain-heart axis during REM sleep: a trigger for dreaming. Am J Physiol Regul Integr Comp Physiol 2021; 321:R951-R959. [PMID: 34704848 DOI: 10.1152/ajpregu.00306.2020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Dreams may be recalled after awakening from sleep following a defined electroencephalographic pattern that involves local decreases in low-frequency activity in the posterior cortical regions. While a dreaming experience implies bodily changes at many organ-, system-, and timescale-levels, the entity and causal role of such peripheral changes in a conscious dream experience are unknown. We performed a comprehensive, causal, multivariate analysis of physiological signals acquired during REM sleep at night, including high-density EEG and peripheral dynamics including electrocardiography and blood pressure. In this preliminary study, we investigated multiple recalls and non-recalls of dream experiences using data from nine healthy volunteers. The aim was not only to investigate the changes in central and autonomic dynamics associated with dream recalls and non-recalls, but also to characterize the central-peripheral dynamical and (causal) directional interactions, and the temporal relations of the related arousals upon awakening. We uncovered a brain-body network that drives a conscious dreaming experience that acts with specific interaction and time delays. Such a network is sustained by the blood pressure dynamics and the increasing functional information transfer from the neural heartbeat regulation to the brain. We conclude that bodily changes play a crucial and causative role in a conscious dream experience during REM sleep.
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Affiliation(s)
- Mimma Nardelli
- Bioengineering and Robotics Research Centre E. Piaggio and Department of Information Engineering, University of Pisa, Italy
| | - Vincenzo Catrambone
- Bioengineering and Robotics Research Centre E. Piaggio and Department of Information Engineering, University of Pisa, Italy
| | - Giulia Grandi
- Department of Translational Research and of New Surgical and Medical Technologies, University of Pisa, Italy
| | - Tommaso Banfi
- Department of Translational Research and of New Surgical and Medical Technologies, University of Pisa, Italy
| | - Rosa Maria Bruno
- INSERM U970 Team 7, Paris Cardiovascular Research Centre - PARCC, University Paris Descartes, Sorbonne Paris Cité, Paris, France
| | - Enzo Pasquale Scilingo
- Bioengineering and Robotics Research Centre E. Piaggio and Department of Information Engineering, University of Pisa, Italy
| | - Ugo Faraguna
- Department of Translational Research and of New Surgical and Medical Technologies, University of Pisa, Italy.,Department of Developmental Neuroscience, IRCCS Fondazione Stella Maris, Pisa, Italy
| | - Gaetano Valenza
- Bioengineering and Robotics Research Centre E. Piaggio and Department of Information Engineering, University of Pisa, Italy
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20
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Monitoring and Predicting Occupant’s Sleep Quality by Using Wearable Device OURA Ring and Smart Building Sensors Data (Living Laboratory Case Study). BUILDINGS 2021. [DOI: 10.3390/buildings11100459] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Today’s commercially-off-the-shelf (COST) wearable devices can unobtrusively capture several important parameters that may be used to measure the indoor comfort of building occupants, including ambient air temperature, relative humidity, skin temperature, perspiration rate, and heart rate. These data could be used not only for improving personal wellbeing, but for adjusting a better indoor environment condition. In this study, we have focused specifically on the sleeping phase. The main purpose of this work was to use the data from wearable devices and smart meters to improve the sleep quality of residents living at KTH Live-in-Lab. The wearable device we used was the OURA ring which specializes in sleep monitoring. In general, the data quality showed good potential for the modelling phase. For the modelling phase, we had to make some choices, such as the programming language and the AI algorithm, that was the best fit for our project. First, it aims to make personal physiological data related studies more transparent. Secondly, the tenants will have a better sleep quality in their everyday life if they have an accurate prediction of the sleeping scores and ability to adjust the built environment. Additionally, using knowledge about end users can help the building owners to design better building systems and services related to the end-user’s wellbeing.
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21
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Ebrahimi F, Alizadeh I. Automatic sleep staging by cardiorespiratory signals: a systematic review. Sleep Breath 2021; 26:965-981. [PMID: 34322822 DOI: 10.1007/s11325-021-02435-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2021] [Revised: 06/22/2021] [Accepted: 07/06/2021] [Indexed: 11/29/2022]
Abstract
BACKGROUND Because of problems with the recording and analysis of the EEG signal, automatic sleep staging using cardiorespiratory signals has been employed as an alternative. This study reports on certain critical points which hold considerable promise for the improvement of the results of the automatic sleep staging using cardiorespiratory signals. METHODS A systematic review. RESULTS The review and analysis of the literature in this area revealed four outstanding points: (1) the feature extraction epoch length, denoting that the standard 30-s segments of cardiorespiratory signals do not carry enough information for automatic sleep staging and that a 4.5-min length segment centering on each 30-s segment is proper for staging, (2) the time delay between the EEG signal extracted from the central nervous system activity and the cardiorespiratory signals extracted from the autonomic nervous system activity should be considered in the automatic sleep staging using cardiorespiratory signals, (3) the information in the morphology of ECG signals can contribute to the improvement of sleep staging, and (4) applying convolutional neural network (CNN) and long short-term memory network (LSTM) deep structures simultaneously to a large PSG recording database can lead to more reliable automatic sleep staging results. CONCLUSIONS Considering the above-mentioned points simultaneously can improve automatic sleep staging by cardiorespiratory signals. It is hoped that by considering the points, staging sleep automatically using cardiorespiratory signals, which does not have problems with the recording and analysis of EEG signals, yields results acceptably close to the results of automatic sleep staging by EEG signals.
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Affiliation(s)
- Farideh Ebrahimi
- Faculty of Electrical and Computer Engineering, Babol Noshirvani University of Technology, Babol, Mazandaran, Iran.
| | - Iman Alizadeh
- English Language Department, School of Paramedical Sciences, Guilan University of Medical Sciences, Rasht, Iran
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22
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Rozo A, Morales J, Moeyersons J, Joshi R, Caiani EG, Borzée P, Buyse B, Testelmans D, Van Huffel S, Varon C. Benchmarking Transfer Entropy Methods for the Study of Linear and Nonlinear Cardio-Respiratory Interactions. ENTROPY 2021; 23:e23080939. [PMID: 34441079 PMCID: PMC8394114 DOI: 10.3390/e23080939] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/08/2021] [Revised: 07/13/2021] [Accepted: 07/20/2021] [Indexed: 11/16/2022]
Abstract
Transfer entropy (TE) has been used to identify and quantify interactions between physiological systems. Different methods exist to estimate TE, but there is no consensus about which one performs best in specific applications. In this study, five methods (linear, k-nearest neighbors, fixed-binning with ranking, kernel density estimation and adaptive partitioning) were compared. The comparison was made on three simulation models (linear, nonlinear and linear + nonlinear dynamics). From the simulations, it was found that the best method to quantify the different interactions was adaptive partitioning. This method was then applied on data from a polysomnography study, specifically on the ECG and the respiratory signals (nasal airflow and respiratory effort around the thorax). The hypothesis that the linear and nonlinear components of cardio-respiratory interactions during light and deep sleep change with the sleep stage, was tested. Significant differences, after performing surrogate analysis, indicate an increased TE during deep sleep. However, these differences were found to be dependent on the type of respiratory signal and sampling frequency. These results highlight the importance of selecting the appropriate signals, estimation method and surrogate analysis for the study of linear and nonlinear cardio-respiratory interactions.
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Affiliation(s)
- Andrea Rozo
- STADIUS, Center of Dynamical Systems, Signal Processing and Data Analytics, Department of Electrical Engineering (ESAT), KU Leuven, 3001 Leuven, Belgium; (J.M.); (J.M.); (S.V.H.); (C.V.)
- Correspondence:
| | - John Morales
- STADIUS, Center of Dynamical Systems, Signal Processing and Data Analytics, Department of Electrical Engineering (ESAT), KU Leuven, 3001 Leuven, Belgium; (J.M.); (J.M.); (S.V.H.); (C.V.)
| | - Jonathan Moeyersons
- STADIUS, Center of Dynamical Systems, Signal Processing and Data Analytics, Department of Electrical Engineering (ESAT), KU Leuven, 3001 Leuven, Belgium; (J.M.); (J.M.); (S.V.H.); (C.V.)
| | - Rohan Joshi
- Department of Patient Care and Monitoring, Philips Research, 5656 AE Eindhoven, The Netherlands;
| | - Enrico G. Caiani
- Department of Electronics, Information and Bioengineering, Politecnico di Milano, 20133 Milan, Italy;
| | - Pascal Borzée
- Department of Pneumology, Leuven University Centre for Sleep and Wake Disorders, UZ Leuven, 3000 Leuven, Belgium; (P.B.); (B.B.); (D.T.)
| | - Bertien Buyse
- Department of Pneumology, Leuven University Centre for Sleep and Wake Disorders, UZ Leuven, 3000 Leuven, Belgium; (P.B.); (B.B.); (D.T.)
| | - Dries Testelmans
- Department of Pneumology, Leuven University Centre for Sleep and Wake Disorders, UZ Leuven, 3000 Leuven, Belgium; (P.B.); (B.B.); (D.T.)
| | - Sabine Van Huffel
- STADIUS, Center of Dynamical Systems, Signal Processing and Data Analytics, Department of Electrical Engineering (ESAT), KU Leuven, 3001 Leuven, Belgium; (J.M.); (J.M.); (S.V.H.); (C.V.)
| | - Carolina Varon
- STADIUS, Center of Dynamical Systems, Signal Processing and Data Analytics, Department of Electrical Engineering (ESAT), KU Leuven, 3001 Leuven, Belgium; (J.M.); (J.M.); (S.V.H.); (C.V.)
- Service de Chimie-Physique E.P., Université libre de Bruxelles, B-1050 Brussels, Belgium
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23
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Yang HW, Garaulet M, Li P, Bandin C, Lin C, Lo MT, Hu K. Daily Rhythm of Fractal Cardiac Dynamics Links to Weight Loss Resistance: Interaction with CLOCK 3111T/C Genetic Variant. Nutrients 2021; 13:nu13072463. [PMID: 34371977 PMCID: PMC8308644 DOI: 10.3390/nu13072463] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2021] [Revised: 07/09/2021] [Accepted: 07/13/2021] [Indexed: 12/31/2022] Open
Abstract
The effectiveness of weight loss treatment displays dramatic inter-individual variabilities, even with well-controlled energy intake/expenditure. This study aimed to determine the association between daily rhythms of cardiac autonomic control and weight loss efficiency and to explore the potential relevance to weight loss resistance in humans carrying the genetic variant C at CLOCK 3111T/C. A total of 39 overweight/obese Caucasian women (20 CLOCK 3111C carriers and 19 non-carriers) completed a behaviour–dietary obesity treatment of ~20 weeks, during which body weight was assessed weekly. Ambulatory electrocardiographic data were continuously collected for up to 3.5 days and used to quantify the daily rhythm of fractal cardiac dynamics (FCD), a non-linear measure of autonomic function. FCD showed a 24 h rhythm (p < 0.001). Independent of energy intake and physical activity level, faster weight loss was observed in individuals with the phase (peak) of the rhythm between ~2–8 p.m. and with a larger amplitude. Interestingly, the phase effect was significant only in C carriers (p = 0.008), while the amplitude effect was only significant in TT carriers (p < 0.0001). The daily rhythm of FCD and CLOCK 3111T/C genotype is linked to weight loss response interactively, suggesting complex interactions between the genetics of the circadian clock, the daily rhythm of autonomic control, and energy balance control.
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Affiliation(s)
- Hui-Wen Yang
- Graduate Institute of Communication Engineering, National Taiwan University, Taipei 10617, Taiwan;
- Institute of Translational and Interdisciplinary Medicine, Department of Biomedical Sciences and Engineering, National Central University, Taoyuan 320317, Taiwan;
- Division of Sleep and Circadian Disorders, Department of Medicine and Neurology, Brigham and Women’s Hospital, Boston, MA 02115, USA;
- Division of Sleep Medicine, Department of Medicine, Harvard Medical School, Boston, MA 02115, USA
| | - Marta Garaulet
- Division of Sleep Medicine, Department of Medicine, Harvard Medical School, Boston, MA 02115, USA
- Department of Physiology, University of Murcia, IMIB, 30071 Murcia, Spain;
- Correspondence: (M.G.); (M.-T.L.); (K.H.)
| | - Peng Li
- Division of Sleep and Circadian Disorders, Department of Medicine and Neurology, Brigham and Women’s Hospital, Boston, MA 02115, USA;
- Division of Sleep Medicine, Department of Medicine, Harvard Medical School, Boston, MA 02115, USA
| | - Cristina Bandin
- Department of Physiology, University of Murcia, IMIB, 30071 Murcia, Spain;
| | - Chen Lin
- Institute of Translational and Interdisciplinary Medicine, Department of Biomedical Sciences and Engineering, National Central University, Taoyuan 320317, Taiwan;
| | - Men-Tzung Lo
- Institute of Translational and Interdisciplinary Medicine, Department of Biomedical Sciences and Engineering, National Central University, Taoyuan 320317, Taiwan;
- Correspondence: (M.G.); (M.-T.L.); (K.H.)
| | - Kun Hu
- Division of Sleep and Circadian Disorders, Department of Medicine and Neurology, Brigham and Women’s Hospital, Boston, MA 02115, USA;
- Division of Sleep Medicine, Department of Medicine, Harvard Medical School, Boston, MA 02115, USA
- Correspondence: (M.G.); (M.-T.L.); (K.H.)
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24
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Madanchi A, Yu JW, Lee WB, Rahimi Tabar MR, Rahbari SHE. Dynamical time scales of friction dynamics in active microrheology of a model glass. SOFT MATTER 2021; 17:5162-5169. [PMID: 34036970 DOI: 10.1039/d0sm02039g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Owing to the local/heterogeneous structures in supercooled liquids, after several decades of research, it is now clear that supercooled liquids are structurally different from their conventional liquid counterparts. Accordingly, an approach based on a local probe should provide a better understanding about the local mechanical properties as well as heterogeneous structures. Recently, the superiority of active microrheology over global rheology has been demonstrated [Yu et al., Sci. Adv., 2020, 6, 8766]. Here, we elaborate this new avenue of research and provide more evidence for such superiority. We report on the results of an extensive molecular dynamics simulation of active microrheology of a model glass. We identify several time scales in time series of friction, and detect a transition in dynamical behavior of friction. We discuss the possible relation to structural heterogeneities-a subject of considerable interest in glass physics.
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Affiliation(s)
- A Madanchi
- Department of Physics, McGill University, H3A2T8, Montreal, Canada
| | - Ji Woong Yu
- School of Chemical and Biological Engineering, Institute of Chemical Processes, Seoul National University, Seoul 08826, Korea
| | - Won Bo Lee
- School of Chemical and Biological Engineering, Institute of Chemical Processes, Seoul National University, Seoul 08826, Korea
| | - M R Rahimi Tabar
- Department of Physics, Sharif University of Technology, Tehran, 11155-9161, Iran and Institute of Physics and ForWind, Carl von Ossietzky University, 26111, Oldenburg, Germany
| | - S H E Rahbari
- School of Chemical and Biological Engineering, Institute of Chemical Processes, Seoul National University, Seoul 08826, Korea and School of Physics, Korea Institute for Advanced Study, Seoul 02455, Korea
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25
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Improved online event detection and differentiation by a simple gradient-based nonlinear transformation: Implications for the biomedical signal and image analysis. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2021.102470] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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26
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Fan J, Meng J, Ludescher J, Chen X, Ashkenazy Y, Kurths J, Havlin S, Schellnhuber HJ. Statistical physics approaches to the complex Earth system. PHYSICS REPORTS 2021; 896:1-84. [PMID: 33041465 PMCID: PMC7532523 DOI: 10.1016/j.physrep.2020.09.005] [Citation(s) in RCA: 39] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2020] [Accepted: 09/23/2020] [Indexed: 05/20/2023]
Abstract
Global warming, extreme climate events, earthquakes and their accompanying socioeconomic disasters pose significant risks to humanity. Yet due to the nonlinear feedbacks, multiple interactions and complex structures of the Earth system, the understanding and, in particular, the prediction of such disruptive events represent formidable challenges to both scientific and policy communities. During the past years, the emergence and evolution of Earth system science has attracted much attention and produced new concepts and frameworks. Especially, novel statistical physics and complex networks-based techniques have been developed and implemented to substantially advance our knowledge of the Earth system, including climate extreme events, earthquakes and geological relief features, leading to substantially improved predictive performances. We present here a comprehensive review on the recent scientific progress in the development and application of how combined statistical physics and complex systems science approaches such as critical phenomena, network theory, percolation, tipping points analysis, and entropy can be applied to complex Earth systems. Notably, these integrating tools and approaches provide new insights and perspectives for understanding the dynamics of the Earth systems. The overall aim of this review is to offer readers the knowledge on how statistical physics concepts and theories can be useful in the field of Earth system science.
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Affiliation(s)
- Jingfang Fan
- Potsdam Institute for Climate Impact Research, Potsdam 14412, Germany
- School of Systems Science, Beijing Normal University, Beijing 100875, China
| | - Jun Meng
- School of Science, Beijing University of Posts and Telecommunications, Beijing 100876, China
- Potsdam Institute for Climate Impact Research, Potsdam 14412, Germany
| | - Josef Ludescher
- Potsdam Institute for Climate Impact Research, Potsdam 14412, Germany
| | - Xiaosong Chen
- School of Systems Science, Beijing Normal University, Beijing 100875, China
| | - Yosef Ashkenazy
- Department of Solar Energy and Environmental Physics, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Midreshet Ben-Gurion 84990, Israel
| | - Jürgen Kurths
- Potsdam Institute for Climate Impact Research, Potsdam 14412, Germany
- Department of Physics, Humboldt University, 10099 Berlin, Germany
- Lobachevsky University of Nizhny Novgorod, Nizhnij Novgorod 603950, Russia
| | - Shlomo Havlin
- Department of Physics, Bar Ilan University, Ramat Gan 52900, Israel
| | - Hans Joachim Schellnhuber
- Potsdam Institute for Climate Impact Research, Potsdam 14412, Germany
- Department of Earth System Science, Tsinghua University, 100084 Beijing, China
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Moreno Escobar JJ, Morales Matamoros O, Aguilar del Villar EY, Tejeida Padilla R, Lina Reyes I, Espinoza Zambrano B, Luna Gómez BD, Calderón Morfín VH. Non-Parametric Evaluation Methods of the Brain Activity of a Bottlenose Dolphin during an Assisted Therapy. Animals (Basel) 2021; 11:ani11020417. [PMID: 33562006 PMCID: PMC7914889 DOI: 10.3390/ani11020417] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2020] [Revised: 01/29/2021] [Accepted: 02/01/2021] [Indexed: 11/23/2022] Open
Abstract
Simple Summary Dolphin Assisted Therapies (DAT) can be used with any person or group with specific needs and it can be as disparate as people at risk of social exclusion, eating disorders, terminally ill, mental health disorders, among many others. This paper is focused on measuring and analyzing dolphins brain activity when DAT is taking place, in order to identify if there is any differences in female dolphin’s neuronal signal when it is interacting with control or intervention subjects. In addition, we designed a wireless and portable electroencephalographic single-channel signal capture device to monitor the brain activity of a female bottle-nose dolphin. Our findings also validate the evidence that the interaction between a patient with a certain disease or disorder and undergoes to a DAT modifies usual brain activity behavior of a female bottle-nose dolphin. Abstract Dolphin-Assisted Therapies (DAT) are alternative therapies aimed to reduce anxiety levels, stress relief and physical benefits. This paper is focused on measuring and analyzing dolphins brain activity when DAT is taking place in order to identify if there is any differences in female dolphin’s neuronal signal when it is interacting with control or intervention subjects, performing our research in Delfiniti, Ixtapa, Mexico facilities. We designed a wireless and portable electroencephalographic single-channel signal capture sensor to acquire and monitor the brain activity of a female bottle-nose dolphin. This EEG sensor was able to show that dolphin activity at rest is characterized by high spectral power at slow-frequencies bands. When the dolphin participated in DAT, a 23.53% increment in the 12–30 Hz frequency band was observed, but this only occurred for patients with some disease or disorder, given that 0.5–4 Hz band keeps it at 17.91% when there is a control patient. Regarding the fractal or Self-Affine Analysis, we found for all samples studied that at the beginning the dolphin’s brain activity behaved as a self-affine fractal described by a power-law until the fluctuations of voltage reached the crossovers, and after the crossovers these fluctuations left this scaling behavior. Hence, our findings validate the hypothesis that the participation in a DAT of a Patient with a certain disease or disorder modifies the usual behavior of a female bottle-nose dolphin.
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Affiliation(s)
- Jesús Jaime Moreno Escobar
- Escuela Superior de Ingeniería Mecánica y Eléctrica, Instituto Politécnico Nacional, 07340 Ciudad de México, Mexico; (O.M.M.); (E.Y.A.d.V.); (I.L.R.); (B.E.Z.); (B.D.L.G.)
- Correspondence: ; Tel.: +52-55-5729-6000 (ext. 54639)
| | - Oswaldo Morales Matamoros
- Escuela Superior de Ingeniería Mecánica y Eléctrica, Instituto Politécnico Nacional, 07340 Ciudad de México, Mexico; (O.M.M.); (E.Y.A.d.V.); (I.L.R.); (B.E.Z.); (B.D.L.G.)
| | - Erika Yolanda Aguilar del Villar
- Escuela Superior de Ingeniería Mecánica y Eléctrica, Instituto Politécnico Nacional, 07340 Ciudad de México, Mexico; (O.M.M.); (E.Y.A.d.V.); (I.L.R.); (B.E.Z.); (B.D.L.G.)
| | - Ricardo Tejeida Padilla
- Escuela Superior de Turismo, Instituto Politécnico Nacional, 07630 Ciudad de México, Mexico;
| | - Ixchel Lina Reyes
- Escuela Superior de Ingeniería Mecánica y Eléctrica, Instituto Politécnico Nacional, 07340 Ciudad de México, Mexico; (O.M.M.); (E.Y.A.d.V.); (I.L.R.); (B.E.Z.); (B.D.L.G.)
| | - Brenda Espinoza Zambrano
- Escuela Superior de Ingeniería Mecánica y Eléctrica, Instituto Politécnico Nacional, 07340 Ciudad de México, Mexico; (O.M.M.); (E.Y.A.d.V.); (I.L.R.); (B.E.Z.); (B.D.L.G.)
| | - Brandon David Luna Gómez
- Escuela Superior de Ingeniería Mecánica y Eléctrica, Instituto Politécnico Nacional, 07340 Ciudad de México, Mexico; (O.M.M.); (E.Y.A.d.V.); (I.L.R.); (B.E.Z.); (B.D.L.G.)
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Ivanov PC. The New Field of Network Physiology: Building the Human Physiolome. FRONTIERS IN NETWORK PHYSIOLOGY 2021; 1:711778. [PMID: 36925582 PMCID: PMC10013018 DOI: 10.3389/fnetp.2021.711778] [Citation(s) in RCA: 73] [Impact Index Per Article: 18.3] [Reference Citation Analysis] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2021] [Accepted: 05/21/2021] [Indexed: 12/22/2022]
Affiliation(s)
- Plamen Ch Ivanov
- Keck Laboratory for Network Physiology, Department of Physics, Boston University, Boston, MA, United States.,Harvard Medical School and Division of Sleep Medicine, Brigham and Women's Hospital, Boston, MA, United States.,Bulgarian Academy of Sciences, Institute of Solid State Physics, Sofia, Bulgaria
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Solís-Montufar EE, Gálvez-Coyt G, Muñoz-Diosdado A. Entropy Analysis of RR-Time Series From Stress Tests. Front Physiol 2020; 11:981. [PMID: 32903750 PMCID: PMC7438833 DOI: 10.3389/fphys.2020.00981] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2019] [Accepted: 07/20/2020] [Indexed: 11/14/2022] Open
Abstract
The RR-interval time series or tachograms obtained from electrocardiograms have been widely studied since they reflect the cardiac variability, and this is an indicative of the health status of a person. The tachogram can be seen as a highly non-linear and complex time series, and therefore, should be analyzed with non-linear techniques. In this work, several entropy measures, Sample Entropy (SampEn), Approximate Entropy (ApEn), and Fuzzy Entropy (FuzzyEn) are used as a measure of heart rate variability (HRV). Tachograms belonging to thirty-nine subjects were obtained from a cardiac stress test consisting of a rest period followed by a period of moderate physical activity. Subjects are grouped according to their physical activity using the IPAQ sedentary and active questionnaire, we work with youth and middle-aged adults. The entropy measures for each group show that for the sedentary subjects the values are high at rest and decrease appreciably with moderate physical activity, This happens for both young and middle-aged adults. These results are highly reproducible. In the case of the subjects that exercise regularly, an increase in entropy is observed or they tend to retain the entropy value that they had at rest. It seems that there is a possible correlation between the physical condition of a person with the increase or decrease in entropy during moderate physical activity with respect to the entropy at rest. It was also observed that entropy during longer physical activity tests tends to decrease as fatigue accumulates, but this decrease is small compared to the change that occurs when going from rest to physical activity.
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Affiliation(s)
- Eric E. Solís-Montufar
- Unidad Profesional Interdisciplinaria de Biotecnología, Instituto Politécnico Nacional, Mexico City, Mexico
- Centro de Investigación en Computación, Instituto Politécnico Nacional, Mexico City, Mexico
| | - Gonzalo Gálvez-Coyt
- Unidad Profesional Interdisciplinaria de Biotecnología, Instituto Politécnico Nacional, Mexico City, Mexico
| | - Alejandro Muñoz-Diosdado
- Unidad Profesional Interdisciplinaria de Biotecnología, Instituto Politécnico Nacional, Mexico City, Mexico
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Matamoros OM, Escobar JJM, Tejeida Padilla R, Lina Reyes I. Neurodynamics of Patients during a Dolphin-Assisted Therapy by Means of a Fractal Intraneural Analysis. Brain Sci 2020; 10:brainsci10060403. [PMID: 32630512 PMCID: PMC7349020 DOI: 10.3390/brainsci10060403] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2020] [Revised: 06/17/2020] [Accepted: 06/22/2020] [Indexed: 11/16/2022] Open
Abstract
The recent proliferation of sensor technology applications in therapies for children’s disabilities to promote positive behavior among such children has produced optimistic results in developing a variety of skills and abilities in them. Dolphin-Assisted Therapy (DAT) has also become a topic of public and research interest for these disorders’ intervention and treatment. This work exposes the development of a system that controls brain–computer interaction when a patient with different abilities undergoes a DAT. To develop the proposed system, TGAM1, i.e., ThinkGear-AM1 series of NeuroSky company, was used, connecting it to an isolated Bluetooth 4.0 communication protocol from a brackish and humid environment, and a Notch Filter was applied to reduce the input noise. In this way, at Definiti Ixtapa-Mexico facilities, we explored the behavior of three children with Infantile Spastic Cerebral Palsy (Experiment 1), as well as the behavior of Obsessive Compulsive Disorder and neurotypic children (Experiment 2). This was done applying the Power Spectrum Density (PSD) and the Self-Affine Analysis (SSA) from Electroencephalogram (EEG) biosignals. The EEG Raw data were time series showing the cerebral brain activity (voltage versus time) before and during DAT for the Experiment 1, and before, during DAT and after for the Experiment 2. Likewise, the EEW RAW data were recorded by the first frontopolar electrode (FP1) by means of an EEG biosensor TGAM1 Module. From the PSD we found that in all child patients a huge increment of brain activity during DAT regarding the before and after therapy periods around 376.28%. Moreover, from the SSA we found that the structure function of the all five child patients displayed an antipersistent behavior, characterized by σ∝δtH, for before, during DAT and after. Nonetheless, we propose that one way to assess whether a DAT is being efficient to the child patients is to increase the during DAT time when the samples are collected, supposing the data fitting by a power law will raise the time, displaying a persistent behavior or positive correlations, until a crossover appears and the curve tends to be horizontal, pointing out that our system has reached a stationary state.
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Affiliation(s)
- Oswaldo Morales Matamoros
- Escuela Superior de Ingeniería Mecánica y Eléctrica, Instituto Politécnico Nacional, 07340 Ciudad de México, Mexico; (O.M.M.); (I.L.R.)
| | - Jesús Jaime Moreno Escobar
- Escuela Superior de Ingeniería Mecánica y Eléctrica, Instituto Politécnico Nacional, 07340 Ciudad de México, Mexico; (O.M.M.); (I.L.R.)
- Correspondence: ; Tel.: +52-55-5729-6000 (ext. 54639)
| | - Ricardo Tejeida Padilla
- Escuela Superior de Turismo, Instituto Politécnico Nacional, 07630 Ciudad de México, Mexico;
| | - Ixchel Lina Reyes
- Escuela Superior de Ingeniería Mecánica y Eléctrica, Instituto Politécnico Nacional, 07340 Ciudad de México, Mexico; (O.M.M.); (I.L.R.)
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Castiglioni P, Omboni S, Parati G, Faini A. Day and Night Changes of Cardiovascular Complexity: A Multi-Fractal Multi-Scale Analysis. ENTROPY 2020; 22:e22040462. [PMID: 33286236 PMCID: PMC7516947 DOI: 10.3390/e22040462] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/14/2020] [Revised: 04/15/2020] [Accepted: 04/16/2020] [Indexed: 12/11/2022]
Abstract
Recently, a multifractal-multiscale approach to detrended fluctuation analysis (DFA) was proposed to evaluate the cardiovascular fractal dynamics providing a surface of self-similarity coefficients α(q,τ), function of the scale τ, and moment order q. We hypothesize that this versatile DFA approach may reflect the cardiocirculatory adaptations in complexity and nonlinearity occurring during the day/night cycle. Our aim is, therefore, to quantify how α(q, τ) surfaces of cardiovascular series differ between daytime and night-time. We estimated α(q,τ) with -5 ≤ q ≤ 5 and 8 ≤ τ ≤ 2048 s for heart rate and blood pressure beat-to-beat series over periods of few hours during daytime wake and night-time sleep in 14 healthy participants. From the α(q,τ) surfaces, we estimated short-term (<16 s) and long-term (from 16 to 512 s) multifractal coefficients. Generating phase-shuffled surrogate series, we evaluated short-term and long-term indices of nonlinearity for each q. We found a long-term night/day modulation of α(q,τ) between 128 and 256 s affecting heart rate and blood pressure similarly, and multifractal short-term modulations at q < 0 for the heart rate and at q > 0 for the blood pressure. Consistent nonlinearity appeared at the shorter scales at night excluding q = 2. Long-term circadian modulations of the heart rate DFA were previously associated with the cardiac vulnerability period and our results may improve the risk stratification indicating the more relevant α(q,τ) area reflecting this rhythm. Furthermore, nonlinear components in the nocturnal α(q,τ) at q ≠ 2 suggest that DFA may effectively integrate the linear spectral information with complexity-domain information, possibly improving the monitoring of cardiac interventions and protocols of rehabilitation medicine.
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Affiliation(s)
- Paolo Castiglioni
- IRCCS Fondazione Don Carlo Gnocchi, 20148 Milan, Italy
- Correspondence:
| | - Stefano Omboni
- Italian Institute of Telemedicine, 21048 Solbiate Arno, Italy;
- Scientific Research Department of Cardiology, Science and Technology Park for Biomedicine, Sechenov First Moscow State Medical University, 119991 Moscow, Russia
| | - Gianfranco Parati
- Department of Medicine and Surgery, University of Milano-Bicocca, 20900 Monza, Italy;
- Istituto Auxologico Italiano, IRCCS, Department of Cardiovascular, Neural and Metabolic Sciences, S.Luca Hospital, 20149 Milan, Italy;
| | - Andrea Faini
- Istituto Auxologico Italiano, IRCCS, Department of Cardiovascular, Neural and Metabolic Sciences, S.Luca Hospital, 20149 Milan, Italy;
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Continuous Vital Monitoring During Sleep and Light Activity Using Carbon-Black Elastomer Sensors. SENSORS 2020; 20:s20061583. [PMID: 32178307 PMCID: PMC7146453 DOI: 10.3390/s20061583] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/10/2020] [Revised: 03/06/2020] [Accepted: 03/10/2020] [Indexed: 11/26/2022]
Abstract
The comfortable, continuous monitoring of vital parameters is still a challenge. The long-term measurement of respiration and cardiovascular signals is required to diagnose cardiovascular and respiratory diseases. Similarly, sleep quality assessment and the recovery period following acute treatments require long-term vital parameter datalogging. To address these requirements, we have developed “VitalCore”, a wearable continuous vital parameter monitoring device in the form of a T-shirt targeting the uninterrupted monitoring of respiration, pulse, and actigraphy. VitalCore uses polymer-based stretchable resistive bands as the primary sensor to capture breathing and pulse patterns from chest expansion. The carbon black-impregnated polymer is implemented in a U-shaped configuration and attached to the T-shirt with “interfacing” material along with the accompanying electronics. In this paper, VitalCore is bench tested and compared to gold standard respiration and pulse measurements to verify its functionality and further to assess the quality of data captured during sleep and during light exercise (walking). We show that these polymer-based sensors could identify respiratory peaks with a sensitivity of 99.44%, precision of 96.23%, and false-negative rate of 0.557% during sleep. We also show that this T-shirt configuration allows the wearer to sleep in all sleeping positions with a negligible difference of data quality. The device was also able to capture breathing during gait with 88.9–100% accuracy in respiratory peak detection.
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Henriques T, Ribeiro M, Teixeira A, Castro L, Antunes L, Costa-Santos C. Nonlinear Methods Most Applied to Heart-Rate Time Series: A Review. ENTROPY 2020; 22:e22030309. [PMID: 33286083 PMCID: PMC7516766 DOI: 10.3390/e22030309] [Citation(s) in RCA: 60] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/30/2020] [Revised: 03/05/2020] [Accepted: 03/06/2020] [Indexed: 12/29/2022]
Abstract
The heart-rate dynamics are one of the most analyzed physiological interactions. Many mathematical methods were proposed to evaluate heart-rate variability. These methods have been successfully applied in research to expand knowledge concerning the cardiovascular dynamics in healthy as well as in pathological conditions. Notwithstanding, they are still far from clinical practice. In this paper, we aim to review the nonlinear methods most used to assess heart-rate dynamics. We focused on methods based on concepts of chaos, fractality, and complexity: Poincaré plot, recurrence plot analysis, fractal dimension (and the correlation dimension), detrended fluctuation analysis, Hurst exponent, Lyapunov exponent entropies (Shannon, conditional, approximate, sample entropy, and multiscale entropy), and symbolic dynamics. We present the description of the methods along with their most notable applications.
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Affiliation(s)
- Teresa Henriques
- Centre for Health Technology and Services Research (CINTESIS), Faculty of Medicine University of Porto, 4200-450 Porto, Portugal; (A.T.); (L.C.); (C.C.-S.)
- Health Information and Decision Sciences Department-MEDCIDS, Faculty of Medicine, University of Porto, 4200-450 Porto, Portugal
- Correspondence: ; Tel.: +351-225-513-622
| | - Maria Ribeiro
- Institute for Systems and Computer Engineering, Technology and Science (INESC-TEC), 4200-465 Porto, Portugal; (M.R.); (L.A.)
- Computer Science Department, Faculty of Sciences, University of Porto, 4169-007 Porto, Portugal
| | - Andreia Teixeira
- Centre for Health Technology and Services Research (CINTESIS), Faculty of Medicine University of Porto, 4200-450 Porto, Portugal; (A.T.); (L.C.); (C.C.-S.)
- Health Information and Decision Sciences Department-MEDCIDS, Faculty of Medicine, University of Porto, 4200-450 Porto, Portugal
| | - Luísa Castro
- Centre for Health Technology and Services Research (CINTESIS), Faculty of Medicine University of Porto, 4200-450 Porto, Portugal; (A.T.); (L.C.); (C.C.-S.)
- Institute for Systems and Computer Engineering, Technology and Science (INESC-TEC), 4200-465 Porto, Portugal; (M.R.); (L.A.)
| | - Luís Antunes
- Institute for Systems and Computer Engineering, Technology and Science (INESC-TEC), 4200-465 Porto, Portugal; (M.R.); (L.A.)
- Computer Science Department, Faculty of Sciences, University of Porto, 4169-007 Porto, Portugal
| | - Cristina Costa-Santos
- Centre for Health Technology and Services Research (CINTESIS), Faculty of Medicine University of Porto, 4200-450 Porto, Portugal; (A.T.); (L.C.); (C.C.-S.)
- Health Information and Decision Sciences Department-MEDCIDS, Faculty of Medicine, University of Porto, 4200-450 Porto, Portugal
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Govindan RB. Detrended fluctuation analysis using orthogonal polynomials. Phys Rev E 2020; 101:010201. [PMID: 32069526 DOI: 10.1103/physreve.101.010201] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2019] [Indexed: 11/07/2022]
Abstract
An alternative analysis approach, namely, orthogonal detrended fluctuation analysis (ODFA), is proposed to quantify the long-range correlation exponent. This method uses an orthogonal polynomial to attenuate any trends and quantify the (auto-) correlations in the data. The method is tested using numerically simulated data with long-range correlation. A matrix formalism of this approach is also proposed. Furthermore, the extension to high-order polynomial detrending is discussed. The proposed approach quantifies the long-range exponent with an error rate of about 8% for short datasets (3000 samples) and an error rate of about 1% for long datasets (100 000 samples). ODFA can find applications that involve processing long datasets as well as in real-time processing.
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Affiliation(s)
- R B Govindan
- Division of Fetal and Transitional Medicine, Children's National Hospital, 111 Michigan Ave. NW, Washington, DC 20010, USA and The George Washington University School of Medicine, Washington, DC 20052, USA
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Karavaev AS, Ishbulatov YM, Ponomarenko VI, Bezruchko BP, Kiselev AR, Prokhorov MD. Autonomic control is a source of dynamical chaos in the cardiovascular system. CHAOS (WOODBURY, N.Y.) 2019; 29:121101. [PMID: 31893640 DOI: 10.1063/1.5134833] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2019] [Accepted: 11/22/2019] [Indexed: 06/10/2023]
Abstract
The origin of complex irregular dynamics in a cardiovascular system is still being actively debated. Some hypotheses suggest the crucial role of stochastic modulation of cardiovascular parameters, while others argue for the importance of cardiac pacemakers' chaotic deterministic dynamics. In the present study, we estimate the largest Lyapunov exponent and the correlation dimension for the 4-h experimental interbeat intervals and the chaotic signals generated by the mathematical model of the cardiovascular system. We study the complexity of the mathematical model for such cases as the autonomic blockade, the exclusion of all the stochastic components, and the absence of variability of respiration. The obtained results suggest that the complexity of the heart rate variability is largely due to the chaotic dynamics in the loops of autonomic control of circulation.
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Affiliation(s)
- A S Karavaev
- Saratov Branch of the Institute of Radio Engineering and Electronics of Russian Academy of Sciences, Zelyonaya Street, 38, Saratov 410019, Russia
| | - Yu M Ishbulatov
- Saratov Branch of the Institute of Radio Engineering and Electronics of Russian Academy of Sciences, Zelyonaya Street, 38, Saratov 410019, Russia
| | - V I Ponomarenko
- Saratov Branch of the Institute of Radio Engineering and Electronics of Russian Academy of Sciences, Zelyonaya Street, 38, Saratov 410019, Russia
| | - B P Bezruchko
- Saratov Branch of the Institute of Radio Engineering and Electronics of Russian Academy of Sciences, Zelyonaya Street, 38, Saratov 410019, Russia
| | - A R Kiselev
- Department of Innovative Cardiological Information Technology, Institute of Cardiological Research, Saratov State Medical University, B. Kazachaya Street, 112, Saratov 410012, Russia
| | - M D Prokhorov
- Saratov Branch of the Institute of Radio Engineering and Electronics of Russian Academy of Sciences, Zelyonaya Street, 38, Saratov 410019, Russia
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Fractal nature of groundwater level fluctuations affected by riparian zone vegetation water use and river stage variations. Sci Rep 2019; 9:15383. [PMID: 31659180 PMCID: PMC6817819 DOI: 10.1038/s41598-019-51657-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2018] [Accepted: 10/01/2019] [Indexed: 11/09/2022] Open
Abstract
Groundwater systems affected by various factors can exhibit complex fractal behaviors, whose reliable characterization however is not straightforward. This study explores the fractal scaling behavior of the groundwater systems affected by plant water use and river stage fluctuations in the riparian zone, using multifractal detrended fluctuation analysis (MFDFA). The multifractal spectrum based on the local Hurst exponent is used to quantify the complexity of fractal nature. Results show that the water level variations at the riparian zone of the Colorado River, USA, exhibit multifractal characteristics mainly caused by the memory of time series of the water level fluctuations. The groundwater level at the monitoring well close to the river characterizes the season-dependent scaling behavior, including persistence from December to February and anti-persistence from March to November. For the site with high-density plants (Tamarisk ramosissima, which requires direct access to groundwater as its source of water), the groundwater level fluctuation becomes persistent in spring and summer, since the plants have the most significant and sustained influence on the groundwater in these seasons, which can result in stronger memory of the water level fluctuation. Results also show that the high-density plants weaken the complexity of the multifractal property of the groundwater system. In addition, the groundwater level variations at the site close to the river exhibit the most complex multifractality due to the influence of the river stage fluctuation.
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Günther M, Bartsch RP, Miron-Shahar Y, Hassin-Baer S, Inzelberg R, Kurths J, Plotnik M, Kantelhardt JW. Coupling Between Leg Muscle Activation and EEG During Normal Walking, Intentional Stops, and Freezing of Gait in Parkinson's Disease. Front Physiol 2019; 10:870. [PMID: 31354521 PMCID: PMC6639586 DOI: 10.3389/fphys.2019.00870] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2019] [Accepted: 06/21/2019] [Indexed: 11/13/2022] Open
Abstract
In this paper, we apply novel techniques for characterizing leg muscle activation patterns via electromyograms (EMGs) and for relating them to changes in electroencephalogram (EEG) activity during gait experiments. Specifically, we investigate changes of leg-muscle EMG amplitudes and EMG frequencies during walking, intentional stops, and unintended freezing-of-gait (FOG) episodes. FOG is a frequent paroxysmal gait disturbance occurring in many patients suffering from Parkinson's disease (PD). We find that EMG amplitudes and frequencies do not change significantly during FOG episodes with respect to walking, while drastic changes occur during intentional stops. Phase synchronization between EMG signals is most pronounced during walking in controls and reduced in PD patients. By analyzing cross-correlations between changes in EMG patterns and brain-wave amplitudes (from EEGs), we find an increase in EEG-EMG coupling at the beginning of stop and FOG episodes. Our results may help to better understand the enigmatic pathophysiology of FOG, to differentiate between FOG events and other gait disturbances, and ultimately to improve diagnostic procedures for patients suffering from PD.
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Affiliation(s)
- Moritz Günther
- Institute of Physics, Martin-Luther-University Halle-Wittenberg, Halle, Germany
- Department of Physics, Bar-Ilan University, Ramat Gan, Israel
| | | | - Yael Miron-Shahar
- Center of Advanced Technologies in Rehabilitation, Sheba Medical Center, Tel Hashomer, Israel
- Neuroscience Department, Sackler Faculty of Medicine, School of Graduate Studies, Tel-Aviv University, Tel Aviv, Israel
| | - Sharon Hassin-Baer
- Sagol Neuroscience Center and Department of Neurology, Sheba Medical Center, Movement Disorders Institute, Tel-Hashomer, Israel
- Sackler Faculty of Medicine, Tel-Aviv University, Tel Aviv, Israel
| | - Rivka Inzelberg
- Department of Neurology and Neurosurgery, Sackler Faculty of Medicine, Tel-Aviv University, Tel Aviv, Israel
- Sagol School of Neuroscience, Tel Aviv University, Tel Aviv, Israel
- Department of Applied Mathematics and Computer Science, The Weizmann Institute of Science, Rehovot, Israel
| | - Jürgen Kurths
- Potsdam Institute for Climate Impact Research, Potsdam, Germany
- Department of Physics, Humboldt University of Berlin, Berlin, Germany
- Saratov State University, Saratov, Russia
| | - Meir Plotnik
- Center of Advanced Technologies in Rehabilitation, Sheba Medical Center, Tel Hashomer, Israel
- Sagol School of Neuroscience, Tel Aviv University, Tel Aviv, Israel
- Department of Physiology and Pharmacology, Sackler Faculty of Medicine, Tel-Aviv University, Tel-Aviv, Israel
- Gonda Brain Research Center, Bar Ilan University, Ramat-Gan, Israel
| | - Jan W. Kantelhardt
- Institute of Physics, Martin-Luther-University Halle-Wittenberg, Halle, Germany
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Fan J, Zhou D, Shekhtman LM, Shapira A, Hofstetter R, Marzocchi W, Ashkenazy Y, Havlin S. Possible origin of memory in earthquakes: Real catalogs and an epidemic-type aftershock sequence model. Phys Rev E 2019; 99:042210. [PMID: 31108655 DOI: 10.1103/physreve.99.042210] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2018] [Indexed: 06/09/2023]
Abstract
Earthquakes are one of the most devastating natural disasters that plague society. Skilled, reliable earthquake forecasting remains the ultimate goal for seismologists. Using the detrended fluctuation analysis (DFA) and conditional probability (CP) methods, we find that memory exists not only in interoccurrence seismic records but also in released energy as well as in the series of the number of events per unit time. Analysis of a standard epidemic-type aftershock sequences (ETAS) earthquake model indicates that the empirically observed earthquake memory can be reproduced only for a narrow range of the model's parameters. This finding therefore provides tight constraints on the model's parameters and can serve as a testbed for existing earthquake forecasting models. Furthermore, we show that by implementing DFA and CP results, the ETAS model can significantly improve the short-term forecasting rate for the real (Italian) earthquake catalog.
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Affiliation(s)
- Jingfang Fan
- Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Midreshet Ben-Gurion 84990, Israel
- Department of Physics, Bar Ilan University, Ramat Gan 52900, Israel
- Potsdam Institute for Climate Impact Research, 14412 Potsdam, Germany
| | - Dong Zhou
- Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Midreshet Ben-Gurion 84990, Israel
- Department of Physics, Bar Ilan University, Ramat Gan 52900, Israel
- School of Reliability and Systems Engineering, Beihang University, Beijing, 100191, China
- Science and Technology on Reliability and Environmental Engineering Laboratory, 100191 Beijing, China
| | | | - Avi Shapira
- National Institute for Regulation of Emergency and Disaster, College of Law and Business, Bnei Brak, 511080, Israel
| | | | - Warner Marzocchi
- Department of Earth, Environmental, and Resources Sciences, University of Naples, Federico II, Complesso di Monte Sant'Angelo, Via Cinthia, 21 80126 Napoli, Italy
| | - Yosef Ashkenazy
- Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Midreshet Ben-Gurion 84990, Israel
| | - Shlomo Havlin
- Department of Physics, Bar Ilan University, Ramat Gan 52900, Israel
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39
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Castiglioni P, Faini A. A Fast DFA Algorithm for Multifractal Multiscale Analysis of Physiological Time Series. Front Physiol 2019; 10:115. [PMID: 30881308 PMCID: PMC6405643 DOI: 10.3389/fphys.2019.00115] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2018] [Accepted: 01/30/2019] [Indexed: 11/29/2022] Open
Abstract
Detrended fluctuation analysis (DFA) is a popular tool in physiological and medical studies for estimating the self-similarity coefficient, α, of time series. Recent researches extended its use for evaluating multifractality (where α is a function of the multifractal parameter q) at different scales n. In this way, the multifractal-multiscale DFA provides a bidimensional surface α(q,n) to quantify the level of multifractality at each scale separately. We recently showed that scale resolution and estimation variability of α(q,n) can be improved at each scale n by splitting the series into maximally overlapped blocks. This, however, increases the computational load making DFA estimations unfeasible in most applications. Our aim is to provide a DFA algorithm sufficiently fast to evaluate the multifractal DFA with maximally overlapped blocks even on long time series, as usually recorded in physiological or clinical settings, therefore improving the quality of the α(q,n) estimate. For this aim, we revise the analytic formulas for multifractal DFA with first- and second-order detrending polynomials (i.e., DFA1 and DFA2) and propose a faster algorithm than the currently available codes. Applying it on synthesized fractal/multifractal series we demonstrate its numerical stability and a computational time about 1% that required by traditional codes. Analyzing long physiological signals (heart-rate tachograms from a 24-h Holter recording and electroencephalographic traces from a sleep study), we illustrate its capability to provide high-resolution α(q,n) surfaces that better describe the multifractal/multiscale properties of time series in physiology. The proposed fast algorithm might, therefore, make it easier deriving richer information on the complex dynamics of clinical signals, possibly improving risk stratification or the assessment of medical interventions and rehabilitation protocols.
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Affiliation(s)
| | - Andrea Faini
- Department of Cardiovascular Neural and Metabolic Sciences, Istituto Auxologico Italiano, IRCCS, S.Luca Hospital, Milan, Italy
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Time-Scaling Properties of Sunshine Duration Based on Detrended Fluctuation Analysis over China. ATMOSPHERE 2019. [DOI: 10.3390/atmos10020083] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
The spatial and temporal variabilities of the daily Sunshine Duration (SSD) time series from the Chinese Meteorological Administration during the 1954–2009 period are examined by the Detrended Fluctuation Analysis (DFA) method. As a whole, weak long-range correlations (LRCs) are found in the daily SSD anomaly records over China. LRCs are also verified by shuffling the SSD records. The proportion of the stations with LRCs accounts for about 97% of the total. Many factors affect the scaling properties of the daily SSD records such as sea-land difference and Tibetan Plateau landform and so on. We find land use and land cover as one of the important factors closely links to LRCs of the SSD. Strong LRCs of the SSD mainly happen in underlying surface of deserts and crops, while weak LRCs occur in forest and grassland. Further studies of scaling behaviors are still necessary to be performed due to the complex underlying surface and climate system.
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Kwon HB, Yoon H, Choi SH, Choi JW, Lee YJ, Park KS. Heart rate variability changes in major depressive disorder during sleep: Fractal index correlates with BDI score during REM sleep. Psychiatry Res 2019; 271:291-298. [PMID: 30513461 DOI: 10.1016/j.psychres.2018.11.021] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/20/2018] [Revised: 11/10/2018] [Accepted: 11/10/2018] [Indexed: 02/06/2023]
Abstract
We investigated the relationship between autonomic nervous system activity during each sleep stage and the severity of depressive symptoms in patients with major depressive disorder (MDD) and healthy control subjects. Thirty patients with MDD and thirty healthy control subjects matched for sex, age, and body mass index completed standard overnight polysomnography. Depression severity was assessed using the Beck Depression Inventory (BDI). Time- and frequency-domain, and fractal HRV parameters were derived from 5-min electrocardiogram segments during light sleep, deep sleep, rapid eye movement (REM) sleep, and the pre- and post-sleep wake periods. Detrended fluctuation analysis (DFA) alpha-1 values during REM sleep were significantly higher in patients with MDD than in control subjects, and a significant correlation existed between DFA alpha-1 and BDI score in all subjects. DFA alpha-1 was the strongest predictor for the BDI score, along with REM density as a covariate. This study found that compared with controls, patients with MDD show reduced complexity in heart rate during REM sleep, which may represent lower cardiovascular adaptability in these patients, and could lead to cardiac disease. Moreover, DFA alpha-1 values measured during REM sleep may be useful as an indicator for the diagnosis and monitoring of depression.
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Affiliation(s)
- Hyun Bin Kwon
- Interdisciplinary Program in Bioengineering, Seoul National University, Seoul 03080, Republic of Korea; Institute of Medical and Biological Engineering, Medical Research Center, Seoul National University, Seoul 03080, Republic of Korea
| | - Heenam Yoon
- Interdisciplinary Program in Bioengineering, Seoul National University, Seoul 03080, Republic of Korea
| | - Sang Ho Choi
- Interdisciplinary Program in Bioengineering, Seoul National University, Seoul 03080, Republic of Korea
| | - Jae-Won Choi
- Department of Neuropsychiatry, Eulji University School of Medicine, Eulji General Hospital, Seoul 01830, Republic of Korea
| | - Yu Jin Lee
- Department of Neuropsychiatry and the Center for Sleep and Chronobiology, Seoul National University Hospital, Seoul 03080, Republic of Korea
| | - Kwang Suk Park
- Department of Biomedical Engineering, College of Medicine, Seoul National University, Seoul 03080, Republic of Korea; Institute of Medical and Biological Engineering, Medical Research Center, Seoul National University, Seoul 03080, Republic of Korea.
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42
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Hosseinabadi S, Masoudi AA. Random deposition with a power-law noise model: Multiaffine analysis. Phys Rev E 2019; 99:012130. [PMID: 30780296 DOI: 10.1103/physreve.99.012130] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2018] [Indexed: 06/09/2023]
Abstract
We study the random deposition model with power-law distributed noise and rare-event dominated fluctuation. In this model instead of particles with unit sizes, rods with variable lengths are deposited onto the substrate. The length of each rod is chosen from a power-law distribution P(l)∼l^{-(μ+1)}, and the site at which each rod is deposited is chosen randomly. The results show that for μ<μ_{c}=3 the log-log diagram of roughness, W(t), versus deposition time, t, increases as a step function, where the roughness in each interval acts as W_{loc}(t)≈t^{β_{loc}}. The local growth exponent, β_{loc}, is zero for μ=1. By increasing the μ exponent, the value of β_{loc} is increased. It tends to the growth exponent of the random distribution model with Gaussian noise, β=1/2, at μ_{c}=3. The fractal analysis of the height fluctuations for this model was performed by multifractal detrended fluctuation analysis algorithm. The results show multiaffinity behavior for the height fluctuations at μ<μ_{c} and the multiaffinity strength is greater for smaller values of the μ exponent.
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Affiliation(s)
- S Hosseinabadi
- Department of Physics, East Tehran Branch, Islamic Azad University, Tehran 18735-136, Iran
| | - A A Masoudi
- Department of Physics, Alzahra University, Tehran 1993891167, Iran
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43
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Zhang X, Kou W, Chang EIC, Gao H, Fan Y, Xu Y. Sleep stage classification based on multi-level feature learning and recurrent neural networks via wearable device. Comput Biol Med 2018; 103:71-81. [DOI: 10.1016/j.compbiomed.2018.10.010] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2018] [Revised: 10/10/2018] [Accepted: 10/10/2018] [Indexed: 10/28/2022]
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44
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Yoon H, Choi SH, Kwon HB, Kim SK, Hwang SH, Oh SM, Choi JW, Lee YJ, Jeong DU, Park KS. Sleep-Dependent Directional Coupling of Cardiorespiratory System in Patients With Obstructive Sleep Apnea. IEEE Trans Biomed Eng 2018; 65:2847-2854. [DOI: 10.1109/tbme.2018.2819719] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Mazzotti DR, Lim DC, Sutherland K, Bittencourt L, Mindel JW, Magalang U, Pack AI, de Chazal P, Penzel T. Opportunities for utilizing polysomnography signals to characterize obstructive sleep apnea subtypes and severity. Physiol Meas 2018; 39:09TR01. [PMID: 30047487 DOI: 10.1088/1361-6579/aad5fe] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
BACKGROUND Obstructive sleep apnea (OSA) is a heterogeneous sleep disorder with many pathophysiological pathways to disease. Currently, the diagnosis and classification of OSA is based on the apnea-hypopnea index, which poorly correlates to underlying pathology and clinical consequences. A large number of in-laboratory sleep studies are performed around the world every year, already collecting an enormous amount of physiological data within an individual. Clinically, we have not yet fully taken advantage of this data, but combined with existing analytical approaches, we have the potential to transform the way OSA is managed within an individual patient. Currently, respiratory signals are used to count apneas and hypopneas, but patterns such as inspiratory flow signals can be used to predict optimal OSA treatment. Electrocardiographic data can reveal arrhythmias, but patterns such as heart rate variability can also be used to detect and classify OSA. Electroencephalography is used to score sleep stages and arousals, but specific patterns such as the odds-ratio product can be used to classify how OSA patients responds differently to arousals. OBJECTIVE In this review, we examine these and many other existing computer-aided polysomnography signal processing algorithms and how they can reflect an individual's manifestation of OSA. SIGNIFICANCE Together with current technological advance, it is only a matter of time before advanced automatic signal processing and analysis is widely applied to precision medicine of OSA in the clinical setting.
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Affiliation(s)
- Diego R Mazzotti
- Center for Sleep and Circadian Neurobiology, University of Pennsylvania, Philadelphia, United States of America
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46
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Golbin A. Specific Compensatory Syndromes in Psychiatry: The “Offset” Concept. Psychiatr Ann 2018. [DOI: 10.3928/00485713-20180717-02] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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47
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Complexity-Based Analysis of the Difference Between Normal Subjects and Subjects with Stuttering in Speech Evoked Auditory Brainstem Response. J Med Biol Eng 2018. [DOI: 10.1007/s40846-018-0430-x] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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48
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Satpute AB, Kragel PA, Barrett LF, Wager TD, Bianciardi M. Deconstructing arousal into wakeful, autonomic and affective varieties. Neurosci Lett 2018; 693:19-28. [PMID: 29378297 DOI: 10.1016/j.neulet.2018.01.042] [Citation(s) in RCA: 58] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2017] [Revised: 01/13/2018] [Accepted: 01/22/2018] [Indexed: 12/11/2022]
Abstract
Arousal plays a central role in a wide variety of phenomena, including wakefulness, autonomic function, affect and emotion. Despite its importance, it remains unclear as to how the neural mechanisms for arousal are organized across them. In this article, we review neuroscience findings for three of the most common origins of arousal: wakeful arousal, autonomic arousal, and affective arousal. Our review makes two overarching points. First, research conducted primarily in non-human animals underscores the importance of several subcortical nuclei that contribute to various sources of arousal, motivating the need for an integrative framework. Thus, we outline an integrative neural reference space as a key first step in developing a more systematic understanding of central nervous system contributions to arousal. Second, there is a translational gap between research on non-human animals, which emphasizes subcortical nuclei, and research on humans using non-invasive neuroimaging techniques, which focuses more on gross anatomical characterizations of cortical (e.g. network architectures including the default mode network) and subcortical structures. We forecast the importance of high-field neuroimaging in bridging this gap to examine how the various networks within the neural reference space for arousal operate across varieties of arousal-related phenomena.
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Affiliation(s)
- Ajay B Satpute
- Departments of Psychology and Neuroscience, Pomona College, Claremont, CA, USA; Department of Psychology, Northeastern University, Boston, MA, USA.
| | - Philip A Kragel
- Department of Psychology and Neuroscience, University of Colorado Boulder, Boulder, USA; The Institute of Cognitive Science, University of Colorado Boulder, Boulder, USA
| | - Lisa Feldman Barrett
- Department of Psychology, Northeastern University, Boston, MA, USA; Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Boston, MA, USA; Department of Radiology, Harvard Medical School, Boston, MA, USA; Department of Psychiatry, Massachusetts General Hospital, Boston, MA, USA
| | - Tor D Wager
- Department of Psychology and Neuroscience, University of Colorado Boulder, Boulder, USA; The Institute of Cognitive Science, University of Colorado Boulder, Boulder, USA
| | - Marta Bianciardi
- Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Boston, MA, USA; Department of Radiology, Harvard Medical School, Boston, MA, USA.
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49
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Qin YH, Zhao ZD, Cai SM, Gao L, Stanley HE. Dual-induced multifractality in online viewing activity. CHAOS (WOODBURY, N.Y.) 2018; 28:013114. [PMID: 29390640 DOI: 10.1063/1.5003100] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Although recent studies have found that the long-term correlations relating to the fat-tailed distribution of inter-event times exist in human activity and that these correlations indicate the presence of fractality, the property of fractality and its origin have not been analyzed. We use both detrended fluctuation analysis and multifractal detrended fluctuation analysis to analyze the time series in online viewing activity separating from Movielens and Netflix. We find long-term correlations at both the individual and communal levels and that the extent of correlation at the individual level is determined by the activity level. These long-term correlations also indicate that there is fractality in the pattern of online viewing. We first find a multifractality that results from the combined effect of the fat-tailed distribution of inter-event times (i.e., the times between successive viewing actions of individuals) and the long-term correlations in online viewing activity and verify this finding using three synthesized series. Therefore, it can be concluded that the multifractality in online viewing activity is caused by both the fat-tailed distribution of inter-event times and the long-term correlations and that this enlarges the generic property of human activity to include not just physical space but also cyberspace.
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Affiliation(s)
- Yu-Hao Qin
- Web Sciences Center, School of Computer Science and Engineering, University of Electronic Science and Technology of China, Chengdu 611731, People's Republic of China
| | - Zhi-Dan Zhao
- Web Sciences Center, School of Computer Science and Engineering, University of Electronic Science and Technology of China, Chengdu 611731, People's Republic of China
| | - Shi-Min Cai
- Web Sciences Center, School of Computer Science and Engineering, University of Electronic Science and Technology of China, Chengdu 611731, People's Republic of China
| | - Liang Gao
- Institute of Systems Science, School of Traffic and Transportation, Beijing Jiaotong University, Beijing 100044, People's Republic of China
| | - H Eugene Stanley
- Center for Polymer Studies and Department of Physics, Boston University, Boston, Massachusetts 02215, USA
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50
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Jost K, Scherer S, De Angelis C, Büchler M, Datta AN, Cattin PC, Frey U, Suki B, Schulzke SM. Surface electromyography for analysis of heart rate variability in preterm infants. Physiol Meas 2017; 39:015004. [PMID: 29120348 DOI: 10.1088/1361-6579/aa996a] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
OBJECTIVE Characterizing heart rate variability (HRV) in neonates has gained increased attention and is helpful in quantifying maturation and risk of sepsis in preterm infants. Raw data used to derive HRV in a clinical setting commonly contain noise from motion artifacts. Thoracic surface electromyography (sEMG) potentially allows for pre-emptive removal of motion artifacts and subsequent detection of interbeat interval (IBI) of heart rate to calculate HRV. We tested the feasibility of sEMG in preterm infants to exclude noisy raw data and to derive IBI for HRV analysis. We hypothesized that a stepwise quality control algorithm can identify motion artifacts which influence IBI values, their distribution in the time domain, and outcomes of nonlinear time series analysis. APPROACH This is a prospective observational study in preterm infants <6 days of age. We used 100 sEMG measurements from 24 infants to develop a semi-automatic quality control algorithm including synchronized video recording, threshold-based sEMG envelope curve, optimized QRS-complex detection, and final targeted visual inspection of raw data. MAIN RESULTS Analysis of HRV from sEMG data in preterm infants is feasible. A stepwise algorithm to exclude motion artifacts and improve QRS detection significantly influenced data quality (34% of raw data excluded), distribution of IBI values in the time domain, and nonlinear time series analysis. The majority of unsuitable data (94%) were excluded by automated steps of the algorithm. SIGNIFICANCE Thoracic sEMG is a promising method to assess motion artifacts and calculate HRV in preterm neonates.
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Affiliation(s)
- Kerstin Jost
- Department of Pediatrics, University of Basel Children's Hospital, Basel, Switzerland. Department of Biomedical Engineering, University of Basel, Basel, Switzerland
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