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Yamamoto M, Sakai M, Yu Z, Nakanishi M, Yoshii H. Glial Markers of Suicidal Behavior in the Human Brain-A Systematic Review of Postmortem Studies. Int J Mol Sci 2024; 25:5750. [PMID: 38891940 PMCID: PMC11171620 DOI: 10.3390/ijms25115750] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2024] [Revised: 05/11/2024] [Accepted: 05/14/2024] [Indexed: 06/21/2024] Open
Abstract
Suicide is a major public health priority, and its molecular mechanisms appear to be related to glial abnormalities and specific transcriptional changes. This study aimed to identify and synthesize evidence of the relationship between glial dysfunction and suicidal behavior to understand the neurobiology of suicide. As of 26 January 2024, 46 articles that met the inclusion criteria were identified by searching PubMed and ISI Web of Science. Most postmortem studies, including 30 brain regions, have determined no density or number of total Nissl-glial cell changes in suicidal patients with major psychiatric disorders. There were 17 astrocytic, 14 microglial, and 9 oligodendroglial studies using specific markers of each glial cell and further on their specific gene expression. Those studies suggest that astrocytic and oligodendroglial cells lost but activated microglia in suicides with affective disorder, bipolar disorders, major depression disorders, or schizophrenia in comparison with non-suicided patients and non-psychiatric controls. Although the data from previous studies remain complex and cannot fully explain the effects of glial cell dysfunction related to suicidal behaviors, they provide risk directions potentially leading to suicide prevention.
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Affiliation(s)
- Mana Yamamoto
- Department of Psychiatric Nursing, Graduate School of Medicine, Tohoku University, 2-1 Seiryo-machi, Aoba-ku, Sendai 980-8575, Japan
| | - Mai Sakai
- Department of Psychiatric Nursing, Graduate School of Medicine, Tohoku University, 2-1 Seiryo-machi, Aoba-ku, Sendai 980-8575, Japan
| | - Zhiqian Yu
- Department of Psychiatry, Graduate School of Medicine, Tohoku University, 1-1 Seiryo-machi, Aoba-ku, Sendai 980-8573, Japan
| | - Miharu Nakanishi
- Department of Psychiatric Nursing, Graduate School of Medicine, Tohoku University, 2-1 Seiryo-machi, Aoba-ku, Sendai 980-8575, Japan
| | - Hatsumi Yoshii
- Department of Psychiatric Nursing, Graduate School of Medicine, Tohoku University, 2-1 Seiryo-machi, Aoba-ku, Sendai 980-8575, Japan
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Nikam RD, Lee J, Lee K, Hwang H. Exploring the Cutting-Edge Frontiers of Electrochemical Random Access Memories (ECRAMs) for Neuromorphic Computing: Revolutionary Advances in Material-to-Device Engineering. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2023; 19:e2302593. [PMID: 37300356 DOI: 10.1002/smll.202302593] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2023] [Revised: 05/23/2023] [Indexed: 06/12/2023]
Abstract
Advanced materials and device engineering has played a crucial role in improving the performance of electrochemical random access memory (ECRAM) devices. ECRAM technology has been identified as a promising candidate for implementing artificial synapses in neuromorphic computing systems due to its ability to store analog values and its ease of programmability. ECRAM devices consist of an electrolyte and a channel material sandwiched between two electrodes, and the performance of these devices depends on the properties of the materials used. This review provides a comprehensive overview of material engineering strategies to optimize the electrolyte and channel materials' ionic conductivity, stability, and ionic diffusivity to improve the performance and reliability of ECRAM devices. Device engineering and scaling strategies are further discussed to enhance ECRAM performance. Last, perspectives on the current challenges and future directions in developing ECRAM-based artificial synapses in neuromorphic computing systems are provided.
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Affiliation(s)
- Revannath Dnyandeo Nikam
- Center for Single Atom-based Semiconductor Device, Pohang University of Science and Technology (POSTECH), Pohang, 790-784, Republic of Korea
- Department of Material Science and Engineering, Pohang University of Science and Technology (POSTECH), Pohang, 790-784, Republic of Korea
| | - Jongwon Lee
- Center for Single Atom-based Semiconductor Device, Pohang University of Science and Technology (POSTECH), Pohang, 790-784, Republic of Korea
- Department of Material Science and Engineering, Pohang University of Science and Technology (POSTECH), Pohang, 790-784, Republic of Korea
| | - Kyumin Lee
- Center for Single Atom-based Semiconductor Device, Pohang University of Science and Technology (POSTECH), Pohang, 790-784, Republic of Korea
- Department of Material Science and Engineering, Pohang University of Science and Technology (POSTECH), Pohang, 790-784, Republic of Korea
| | - Hyunsang Hwang
- Center for Single Atom-based Semiconductor Device, Pohang University of Science and Technology (POSTECH), Pohang, 790-784, Republic of Korea
- Department of Material Science and Engineering, Pohang University of Science and Technology (POSTECH), Pohang, 790-784, Republic of Korea
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Manninen T, Aćimović J, Linne ML. Analysis of Network Models with Neuron-Astrocyte Interactions. Neuroinformatics 2023; 21:375-406. [PMID: 36959372 PMCID: PMC10085960 DOI: 10.1007/s12021-023-09622-w] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 02/01/2023] [Indexed: 03/25/2023]
Abstract
Neural networks, composed of many neurons and governed by complex interactions between them, are a widely accepted formalism for modeling and exploring global dynamics and emergent properties in brain systems. In the past decades, experimental evidence of computationally relevant neuron-astrocyte interactions, as well as the astrocytic modulation of global neural dynamics, have accumulated. These findings motivated advances in computational glioscience and inspired several models integrating mechanisms of neuron-astrocyte interactions into the standard neural network formalism. These models were developed to study, for example, synchronization, information transfer, synaptic plasticity, and hyperexcitability, as well as classification tasks and hardware implementations. We here focus on network models of at least two neurons interacting bidirectionally with at least two astrocytes that include explicitly modeled astrocytic calcium dynamics. In this study, we analyze the evolution of these models and the biophysical, biochemical, cellular, and network mechanisms used to construct them. Based on our analysis, we propose how to systematically describe and categorize interaction schemes between cells in neuron-astrocyte networks. We additionally study the models in view of the existing experimental data and present future perspectives. Our analysis is an important first step towards understanding astrocytic contribution to brain functions. However, more advances are needed to collect comprehensive data about astrocyte morphology and physiology in vivo and to better integrate them in data-driven computational models. Broadening the discussion about theoretical approaches and expanding the computational tools is necessary to better understand astrocytes' roles in brain functions.
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Affiliation(s)
- Tiina Manninen
- Faculty of Medicine and Health Technology, Tampere University, Korkeakoulunkatu 3, FI-33720, Tampere, Finland.
| | - Jugoslava Aćimović
- Faculty of Medicine and Health Technology, Tampere University, Korkeakoulunkatu 3, FI-33720, Tampere, Finland
| | - Marja-Leena Linne
- Faculty of Medicine and Health Technology, Tampere University, Korkeakoulunkatu 3, FI-33720, Tampere, Finland.
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Rahiminejad E, Azad F, Parvizi-Fard A, Amiri M, Linares-Barranco B. A Neuromorphic CMOS Circuit With Self-Repairing Capability. IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS 2022; 33:2246-2258. [PMID: 33417568 DOI: 10.1109/tnnls.2020.3045019] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Neurophysiological observations confirm that the brain not only is able to detect the impaired synapses (in brain damage) but also it is relatively capable of repairing faulty synapses. It has been shown that retrograde signaling by astrocytes leads to the modulation of synaptic transmission and thus bidirectional collaboration of astrocyte with nearby neurons is an important aspect of self-repairing mechanism. Specifically, the retrograde signaling via astrocyte can increase the transmission probability of the healthy synapses linked to the neuron. Motivated by these findings, in the present research, a CMOS neuromorphic circuit with self-repairing capabilities is proposed based on astrocyte signaling. In this way, the computational model of self-repairing process is hired as a basis for designing a novel analog integrated circuit in the 180-nm CMOS technology. It is illustrated that the proposed analog circuit is able to successfully recompense the damaged synapses by appropriately modifying the voltage signals of the remaining healthy synapses in the wide range of frequency. The proposed circuit occupies 7500- [Formula: see text] silicon area and its power consumption is about [Formula: see text]. This neuromorphic fault-tolerant circuit can be considered as a key candidate for future silicon neuronal systems and implementation of neurorobotic and neuro-inspired circuits.
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Schuman CD, Kulkarni SR, Parsa M, Mitchell JP, Date P, Kay B. Opportunities for neuromorphic computing algorithms and applications. NATURE COMPUTATIONAL SCIENCE 2022; 2:10-19. [PMID: 38177712 DOI: 10.1038/s43588-021-00184-y] [Citation(s) in RCA: 163] [Impact Index Per Article: 54.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2021] [Accepted: 12/07/2021] [Indexed: 01/06/2024]
Abstract
Neuromorphic computing technologies will be important for the future of computing, but much of the work in neuromorphic computing has focused on hardware development. Here, we review recent results in neuromorphic computing algorithms and applications. We highlight characteristics of neuromorphic computing technologies that make them attractive for the future of computing and we discuss opportunities for future development of algorithms and applications on these systems.
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Affiliation(s)
- Catherine D Schuman
- Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
- Department of Electrical Engineering and Computer Science, University of Tennessee, Knoxville, TN, USA.
| | - Shruti R Kulkarni
- Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA
| | - Maryam Parsa
- Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA
- Department of Electrical and Computer Engineering, George Mason University, Fairfax, VA, USA
| | - J Parker Mitchell
- Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA
| | - Prasanna Date
- Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA
| | - Bill Kay
- Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA
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Garg U, Yang K, Sengupta A. Emulation of Astrocyte Induced Neural Phase Synchrony in Spin-Orbit Torque Oscillator Neurons. Front Neurosci 2021; 15:699632. [PMID: 34712110 PMCID: PMC8546188 DOI: 10.3389/fnins.2021.699632] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2021] [Accepted: 08/25/2021] [Indexed: 12/04/2022] Open
Abstract
Astrocytes play a central role in inducing concerted phase synchronized neural-wave patterns inside the brain. In this article, we demonstrate that injected radio-frequency signal in underlying heavy metal layer of spin-orbit torque oscillator neurons mimic the neuron phase synchronization effect realized by glial cells. Potential application of such phase coupling effects is illustrated in the context of a temporal "binding problem." We also present the design of a coupled neuron-synapse-astrocyte network enabled by compact neuromimetic devices by combining the concepts of local spike-timing dependent plasticity and astrocyte induced neural phase synchrony.
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Affiliation(s)
- Umang Garg
- School of Electrical Engineering and Computer Science, Department of Materials Science and Engineering, The Pennsylvania State University, University Park, PA, United States
- Department of Electronics and Instrumentation Engineering, Birla Institute of Technology and Science, Pilani, India
| | - Kezhou Yang
- School of Electrical Engineering and Computer Science, Department of Materials Science and Engineering, The Pennsylvania State University, University Park, PA, United States
| | - Abhronil Sengupta
- School of Electrical Engineering and Computer Science, Department of Materials Science and Engineering, The Pennsylvania State University, University Park, PA, United States
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Wang J, Cauwenberghs G, Broccard FD. Neuromorphic Dynamical Synapses With Reconfigurable Voltage-Gated Kinetics. IEEE Trans Biomed Eng 2019; 67:1831-1840. [PMID: 31647418 DOI: 10.1109/tbme.2019.2948809] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
OBJECTIVE Although biological synapses express a large variety of receptors in neuronal membranes, the current hardware implementation of neuromorphic synapses often rely on simple models ignoring the heterogeneity of synaptic transmission. Our objective is to emulate different types of synapses with distinct properties. METHODS Conductance-based chemical and electrical synapses were implemented between silicon neurons on a fully programmable and reconfigurable, biophysically realistic neuromorphic VLSI chip. Different synaptic properties were achieved by configuring on-chip digital parameters for the conductances, reversal potentials, and voltage dependence of the channel kinetics. The measured I-V characteristics of the artificial synapses were compared with biological data. RESULTS We reproduced the response properties of five different types of chemical synapses, including both excitatory ( AMPA, NMDA) and inhibitory ( GABAA, GABAC, glycine) ionotropic receptors. In addition, electrical synapses were implemented in a small network of four silicon neurons. CONCLUSION Our work extends the repertoire of synapse types between silicon neurons, providing greater flexibility for the design and implementation of biologically realistic neural networks on neuromorphic chips. SIGNIFICANCE A higher synaptic heterogeneity in neuromorphic chips is relevant for the hardware implementation of energy-efficient population codes as well as for dynamic clamp applications where neural models are implemented in neuromorphic VLSI hardware.
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Li X, Zhong S, Morizio J. 16-Channel biphasic current-mode programmable charge balanced neural stimulation. Biomed Eng Online 2017; 16:104. [PMID: 28806960 PMCID: PMC5556675 DOI: 10.1186/s12938-017-0385-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2017] [Accepted: 07/22/2017] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Neural stimulation is an important method used to activate or inhibit action potentials of the neuronal anatomical targets found in the brain, central nerve and peripheral nerve. The neural stimulator system produces biphasic pulses that deliver balanced charge into tissue from single or multichannel electrodes. The timing and amplitude of these biphasic pulses are precisely controlled by the neural stimulator software or imbedded algorithms. Amplitude mismatch between the anodic current and cathodic current of the biphasic pulse will cause permanently damage for the neural tissues. The main goal of our circuit and layout design is to implement a 16-channel biphasic current mode programmable neural stimulator with calibration to minimize the current mismatch caused by inherent complementary metal oxide semiconductor (CMOS) manufacturing processes. METHODS This paper presents a 16-channel constant current mode neural stimulator chip. Each channel consists of a 7-bit controllable current DAC used as sink and source current driver. To reduce the LSB quantization error and the current mismatch, an automatic calibration circuit and flow diagram is presented in this paper. There are two modes of operation of the stimulator chip-namely, stimulation mode and calibration mode. The chip also includes a digital interface used to control the stimulator parameters and calibration levels specific for each individual channel. RESULTS This stimulator Application Specific Integrated Circuit (ASIC) is designed and fabricated in a 0.18 μm High-Voltage CMOS technology that allows for ±20 V power supply. The full-scale stimulation current was designed to be at 1 mA per channel. The output current was shown to be constant throughout the timing cycles over a wide range of electrode load impedances. The calibration circuit was also designed to reduce the effect of CMOS process variation of the P-channel metal oxide semiconductor (PMOS) and N-channel metal oxide semiconductor (NMOS) devices that will result in charge delivery to have less than 0.13% error. CONCLUSIONS A 16-channel integrated biphasic neural stimulator chip with calibration is presented in this paper. The stimulator circuit design was simulated and the chip layout was completed. The chip layout was verified using design rules check (DRC) and layout versus schematic (LVS) design check using computer aided design (CAD) software. The test results we presented show constant current stimulation with charge balance error within 0.13% least-significant-bit (LSB). This LSB error was consistent throughout a variety stimulation patterns and electrode load impedances.
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Affiliation(s)
- Xiaoran Li
- School of Information and Electronics, Beijing Institute of Technology, Beijing, 100081, China
| | - Shunan Zhong
- School of Information and Electronics, Beijing Institute of Technology, Beijing, 100081, China.
| | - James Morizio
- Department of Electrical and Computer Engineering, Duke University, Durham, NC, 27703, USA.
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Pastur-Romay LA, Cedrón F, Pazos A, Porto-Pazos AB. Deep Artificial Neural Networks and Neuromorphic Chips for Big Data Analysis: Pharmaceutical and Bioinformatics Applications. Int J Mol Sci 2016; 17:E1313. [PMID: 27529225 PMCID: PMC5000710 DOI: 10.3390/ijms17081313] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2016] [Revised: 07/14/2016] [Accepted: 07/25/2016] [Indexed: 12/20/2022] Open
Abstract
Over the past decade, Deep Artificial Neural Networks (DNNs) have become the state-of-the-art algorithms in Machine Learning (ML), speech recognition, computer vision, natural language processing and many other tasks. This was made possible by the advancement in Big Data, Deep Learning (DL) and drastically increased chip processing abilities, especially general-purpose graphical processing units (GPGPUs). All this has created a growing interest in making the most of the potential offered by DNNs in almost every field. An overview of the main architectures of DNNs, and their usefulness in Pharmacology and Bioinformatics are presented in this work. The featured applications are: drug design, virtual screening (VS), Quantitative Structure-Activity Relationship (QSAR) research, protein structure prediction and genomics (and other omics) data mining. The future need of neuromorphic hardware for DNNs is also discussed, and the two most advanced chips are reviewed: IBM TrueNorth and SpiNNaker. In addition, this review points out the importance of considering not only neurons, as DNNs and neuromorphic chips should also include glial cells, given the proven importance of astrocytes, a type of glial cell which contributes to information processing in the brain. The Deep Artificial Neuron-Astrocyte Networks (DANAN) could overcome the difficulties in architecture design, learning process and scalability of the current ML methods.
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Affiliation(s)
- Lucas Antón Pastur-Romay
- Department of Information and Communications Technologies, University of A Coruña, A Coruña 15071, Spain.
| | - Francisco Cedrón
- Department of Information and Communications Technologies, University of A Coruña, A Coruña 15071, Spain.
| | - Alejandro Pazos
- Department of Information and Communications Technologies, University of A Coruña, A Coruña 15071, Spain.
- Instituto de Investigación Biomédica de A Coruña (INIBIC), Complexo Hospitalario Universitario de A Coruña (CHUAC), A Coruña 15006, Spain.
| | - Ana Belén Porto-Pazos
- Department of Information and Communications Technologies, University of A Coruña, A Coruña 15071, Spain.
- Instituto de Investigación Biomédica de A Coruña (INIBIC), Complexo Hospitalario Universitario de A Coruña (CHUAC), A Coruña 15006, Spain.
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Ranjbar M, Amiri M. On the role of astrocyte analog circuit in neural frequency adaptation. Neural Comput Appl 2015. [DOI: 10.1007/s00521-015-2112-8] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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