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For: Fujimoto YK, Terbush RN, Patsalo V, Green DF. Computational models explain the oligosaccharide specificity of cyanovirin-N. Protein Sci 2008;17:2008-14. [PMID: 18809850 PMCID: PMC2578810 DOI: 10.1110/ps.034637.108] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2008] [Revised: 07/30/2008] [Accepted: 07/31/2008] [Indexed: 10/21/2022]
Number Cited by Other Article(s)
1
Woodrum BW, Maxwell J, Allen DM, Wilson J, Krumpe LRH, Bobkov AA, Hill RB, Kibler KV, O'Keefe BR, Ghirlanda G. A Designed "Nested" Dimer of Cyanovirin-N Increases Antiviral Activity. Viruses 2016;8:v8060158. [PMID: 27275831 PMCID: PMC4926178 DOI: 10.3390/v8060158] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2016] [Revised: 05/26/2016] [Accepted: 05/30/2016] [Indexed: 12/19/2022]  Open
2
Santos JA, Kondo MY, Freitas RF, dos Santos MH, Ramalho TC, Assis DM, Juliano L, Juliano MA, Puzer L. The natural flavone fukugetin as a mixed-type inhibitor for human tissue kallikreins. Bioorg Med Chem Lett 2016;26:1485-9. [DOI: 10.1016/j.bmcl.2016.01.039] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2015] [Revised: 01/12/2016] [Accepted: 01/14/2016] [Indexed: 10/22/2022]
3
Li Z, Bolia A, Maxwell JD, Bobkov AA, Ghirlanda G, Ozkan SB, Margulis CJ. A Rigid Hinge Region Is Necessary for High-Affinity Binding of Dimannose to Cyanovirin and Associated Constructs. Biochemistry 2015;54:6951-60. [PMID: 26507789 DOI: 10.1021/acs.biochem.5b00635] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
4
Raja R, Hemaiswarya S, Ganesan V, Carvalho IS. Recent developments in therapeutic applications of Cyanobacteria. Crit Rev Microbiol 2015;42:394-405. [PMID: 25629310 DOI: 10.3109/1040841x.2014.957640] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
5
Bolia A, Woodrum BW, Cereda A, Ruben MA, Wang X, Ozkan SB, Ghirlanda G. A flexible docking scheme efficiently captures the energetics of glycan-cyanovirin binding. Biophys J 2014;106:1142-51. [PMID: 24606938 DOI: 10.1016/j.bpj.2014.01.040] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2013] [Revised: 01/08/2014] [Accepted: 01/10/2014] [Indexed: 01/10/2023]  Open
6
The antiviral lectin cyanovirin-N: probing multivalency and glycan recognition through experimental and computational approaches. Biochem Soc Trans 2014;41:1170-6. [PMID: 24059504 DOI: 10.1042/bst20130154] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
7
Ramadugu SK, Li Z, Kashyap HK, Margulis CJ. The role of Glu41 in the binding of dimannose to P51G-m4-CVN. Biochemistry 2014;53:1477-84. [PMID: 24524298 DOI: 10.1021/bi4014159] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
8
Fujimoto YK, Green DF. Carbohydrate recognition by the antiviral lectin cyanovirin-N. J Am Chem Soc 2012;134:19639-51. [PMID: 23057413 DOI: 10.1021/ja305755b] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
9
Patsalo V, Raleigh DP, Green DF. Rational and computational design of stabilized variants of cyanovirin-N that retain affinity and specificity for glycan ligands. Biochemistry 2011;50:10698-712. [PMID: 22032696 PMCID: PMC3234137 DOI: 10.1021/bi201411c] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
10
Sharma A, Vijayan M. Quaternary association in β-prism I fold plant lectins: Insights from X-ray crystallography, modelling and molecular dynamics. J Biosci 2011;36:793-808. [DOI: 10.1007/s12038-011-9166-2] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/15/2022]
11
Roldós V, Cañada FJ, Jiménez-Barbero J. Carbohydrate-Protein Interactions: A 3D View by NMR. Chembiochem 2011;12:990-1005. [DOI: 10.1002/cbic.201000705] [Citation(s) in RCA: 72] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2010] [Indexed: 12/29/2022]
12
Vorontsov II, Miyashita O. Crystal molecular dynamics simulations to speed up MM/PB(GB)SA evaluation of binding free energies of di-mannose deoxy analogs with P51G-m4-Cyanovirin-N. J Comput Chem 2010;32:1043-53. [DOI: 10.1002/jcc.21683] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2010] [Revised: 07/28/2010] [Accepted: 08/22/2010] [Indexed: 12/26/2022]
13
Frank M, Schloissnig S. Bioinformatics and molecular modeling in glycobiology. Cell Mol Life Sci 2010;67:2749-72. [PMID: 20364395 PMCID: PMC2912727 DOI: 10.1007/s00018-010-0352-4] [Citation(s) in RCA: 59] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2009] [Revised: 03/08/2010] [Accepted: 03/11/2010] [Indexed: 12/11/2022]
14
Carrascal N, Green DF. Energetic decomposition with the generalized-born and Poisson-Boltzmann solvent models: lessons from association of G-protein components. J Phys Chem B 2010;114:5096-116. [PMID: 20355699 DOI: 10.1021/jp910540z] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
15
Vorontsov II, Miyashita O. Solution and crystal molecular dynamics simulation study of m4-cyanovirin-N mutants complexed with di-mannose. Biophys J 2010;97:2532-40. [PMID: 19883596 DOI: 10.1016/j.bpj.2009.08.011] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2009] [Revised: 08/03/2009] [Accepted: 08/04/2009] [Indexed: 11/19/2022]  Open
16
Sharma A, Sekar K, Vijayan M. Structure, dynamics, and interactions of jacalin. Insights from molecular dynamics simulations examined in conjunction with results of X-ray studies. Proteins 2010;77:760-77. [PMID: 19544573 DOI: 10.1002/prot.22486] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
17
Shridhar S, Chattopadhyay D, Yadav G. PLecDom: a program for identification and analysis of plant lectin domains. Nucleic Acids Res 2009;37:W452-8. [PMID: 19474338 PMCID: PMC2703983 DOI: 10.1093/nar/gkp409] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
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