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Xiang JX, Saha M, Zhong KL, Zhang QS, Zhang D, Jueterbock A, Krueger-Hadfield SA, Wang GG, Weinberger F, Hu ZM. Genome-scale signatures of adaptive gene expression changes in an invasive seaweed Gracilaria vermiculophylla. Mol Ecol 2023; 32:613-627. [PMID: 36355347 DOI: 10.1111/mec.16776] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2022] [Revised: 11/02/2022] [Accepted: 11/08/2022] [Indexed: 11/12/2022]
Abstract
Invasive species can successfully and rapidly colonize new niches and expand ranges via founder effects and enhanced tolerance towards environmental stresses. However, the underpinning molecular mechanisms (i.e., gene expression changes) facilitating rapid adaptation to harsh environments are still poorly understood. The red seaweed Gracilaria vermiculophylla, which is native to the northwest Pacific but invaded North American and European coastal habitats over the last 100 years, provides an excellent model to examine whether enhanced tolerance at the level of gene expression contributed to its invasion success. We collected G. vermiculophylla from its native range in Japan and from two non-native regions along the Delmarva Peninsula (Eastern United States) and in Germany. Thalli were reared in a common garden for 4 months at which time we performed comparative transcriptome (mRNA) and microRNA (miRNA) sequencing. MRNA-expression profiling identified 59 genes that were differently expressed between native and non-native thalli. Of these genes, most were involved in metabolic pathways, including photosynthesis, abiotic stress, and biosynthesis of products and hormones in all four non-native sites. MiRNA-based target-gene correlation analysis in native/non-native pairs revealed that some target genes are positively or negatively regulated via epigenetic mechanisms. Importantly, these genes are mostly associated with metabolism and defence capability (e.g., metal transporter Nramp5, senescence-associated protein, cell wall-associated hydrolase, ycf68 protein and cytochrome P450-like TBP). Thus, our gene expression results indicate that resource reallocation to metabolic processes is most likely a predominant mechanism contributing to the range-wide persistence and adaptation of G. vermiculophylla in the invaded range. This study, therefore, provides molecular insight into the speed and nature of invasion-mediated rapid adaption.
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Affiliation(s)
| | - Mahasweta Saha
- Marine Ecology Division, GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel, Kiel, Germany
- Marine Ecology and Biodiversity, Plymouth Marine Laboratory, Plymouth, UK
| | - Kai-Le Zhong
- Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China
| | | | - Di Zhang
- Ocean School, YanTai University, Yantai, China
| | - Alexander Jueterbock
- Algal and Microbial Biotechnology Division, Faculty of Biosciences and Aquaculture, Nord University, Bodø, Norway
| | | | - Gao-Ge Wang
- Institute of Evolution and Marine Biodiversity, College of Marine Life Sciences, Ocean University of China, Qingdao, China
| | - Florian Weinberger
- Marine Ecology Division, GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel, Kiel, Germany
| | - Zi-Min Hu
- Ocean School, YanTai University, Yantai, China
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2
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Impact of invasive alien plants Gutenbergia cordifolia and Tagetes minuta on native taxa in the Ngorongoro crater, Tanzania. SCIENTIFIC AFRICAN 2021. [DOI: 10.1016/j.sciaf.2021.e00946] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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3
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He J, Rindi L, Mintrone C, Benedetti‐Cecchi L. Exogenous disturbances and endogenous self‐organized processes are not mutually exclusive drivers of spatial patterns in macroalgal assemblages. OIKOS 2021. [DOI: 10.1111/oik.07908] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jianyu He
- Dept of Biology, Univ. of Pisa, CoNISMa Pisa Italy
- Marine Science and Technical College, Zhejiang Ocean Univ., Zhoushan City Zhejiang China
| | - Luca Rindi
- Dept of Biology, Univ. of Pisa, CoNISMa Pisa Italy
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Pellecchia A, Fernández TV, Franzitta G, Bertocci I. Recovery ability of lowshore sessile assemblages in a highly contaminated post-industrial area. MARINE ENVIRONMENTAL RESEARCH 2020; 153:104829. [PMID: 31722798 DOI: 10.1016/j.marenvres.2019.104829] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/09/2019] [Revised: 10/23/2019] [Accepted: 10/25/2019] [Indexed: 06/10/2023]
Abstract
The inheritance of environmental contamination left by abandoned industrial plants is widespread globally. Here we compared the patterns of recovery of lowshore algal and invertebrate assemblages between the post-industrial site of Bagnoli-Coroglio and four reference sites distributed along the coast in the Gulf of Naples, southern Tyrrhenian Sea. The structure of whole assemblages, richness of taxa and abundance of individual taxa were followed during one year since an event of experimental disturbance consisting in the removal of all erect organisms from the rocky substrate. Our main findings suggest that the examined benthic assemblages recovered effectively and quickly after a pulse disturbance and, contrarily to initial expectations, that this ability was comparable between the post-industrial site and the reference sites. This result is discussed in terms of several plausible processes and mechanisms, including the general capability of intertidal organisms to recover from physical disturbance, the potential high level of environmental stress affecting the reference sites too, the chance that the most intense impacts of contamination remained restricted to the sediments of the post-industrial site without propagating to adjacent rocky habitats, and the large natural variability of reference sites that may have masked weak effects of the historical contamination. Irrespective of the actual causes, we emphasize the need for including natural variability of the examined system in any future restoration interventions, to guarantee representation of the range of variation of target organisms and of their underlying processes, and to avoid confounding the intended post-industrial impact with the effects of other natural and anthropogenic processes.
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Affiliation(s)
- Antonella Pellecchia
- Stazione Zoologica Anton Dohrn, Villa Comunale, 80121, Naples, Italy; Alma Mater Studiorum, University of Bologna, Ravenna Campus, Via S. Alberto 163, 48123, Ravenna, Italy.
| | | | - Giulio Franzitta
- Stazione Zoologica Anton Dohrn, Villa Comunale, 80121, Naples, Italy
| | - Iacopo Bertocci
- Stazione Zoologica Anton Dohrn, Villa Comunale, 80121, Naples, Italy; Department of Biology, University of Pisa, CoNISMa, Via Derna 1, 56126, Pisa, Italy
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de la Hoz CF, Ramos E, Puente A, Juanes JA. Climate change induced range shifts in seaweeds distributions in Europe. MARINE ENVIRONMENTAL RESEARCH 2019; 148:1-11. [PMID: 31075527 DOI: 10.1016/j.marenvres.2019.04.012] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2019] [Revised: 04/17/2019] [Accepted: 04/29/2019] [Indexed: 06/09/2023]
Abstract
There are evidences of how climate change is affecting seaweeds distribution and the ecosystems services they provide. Therefore, it is necessary to consider these impacts when managing marine areas. One of the most applied tools in recent years to deal with this are species distribution models, however there are still some challenges to solve, such as the inclusion of hydrodynamic predictors and the application of effective, transferable and user-oriented methodologies. Five species (Saccorhiza polyschides, Gelidium spinosum, Sargassum muticum, Pelvetia canaliculata and Cystoseira baccata) in Europe and 15 variables were considered. Nine of them were projected to the RCPs 4.5 and 8.5 for the mid-term (2040-2069) and the long term (2070-2099). Algorithms for each species were applied to generate models that were assessed by comparison of probabilities and observations (area under the curve, true skill statistics, Boyce index, sensitivity, correct classification rate), niches overlap (Schoener's D, Hellinger's I), geographical similarity (interquartile range) and ecological realism. Models built demonstrated very good predictive accuracy and sensitivity, without overfitting risk. A medium overlap in the historical and RCPs environmental conditions were obtained, therefore the models can be considered transferable and results accurate because only some isolated points were detected as outliers, corresponding to low probabilities. The areas of S. polyschides and G. spinosum have been identified to be dramatically reduced, meanwhile S. muticum and C. baccata were predicted to expand their range. P. canaliculata was expected to keep its sites of presence but with a decrease in its probability of occurrence. For all species it was remarkable the importance of hydrodynamic variables and parameters representing extreme conditions. Spatially predictions of the potential species and areas at risk are decisive for defining management strategies and resource allocation. The performance and usefulness of the approach applied in this study have been demonstrated for algae with different ecological requirements (from upper littoral to subtidal) and distributional patterns (native and invasive), therefore results can be used by marine planners with different goals: marine protected areas designation, monitoring efforts guiding, invasions risk assessment or aquaculture facilities zonation.
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Affiliation(s)
- Camino Fernández de la Hoz
- Environmental Hydraulics Institute, Universidad de Cantabria - Avda. Isabel Torres, 15, PCTCAN, 39011, Santander, Spain.
| | - Elvira Ramos
- Environmental Hydraulics Institute, Universidad de Cantabria - Avda. Isabel Torres, 15, PCTCAN, 39011, Santander, Spain.
| | - Araceli Puente
- Environmental Hydraulics Institute, Universidad de Cantabria - Avda. Isabel Torres, 15, PCTCAN, 39011, Santander, Spain.
| | - José A Juanes
- Environmental Hydraulics Institute, Universidad de Cantabria - Avda. Isabel Torres, 15, PCTCAN, 39011, Santander, Spain.
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Bertocci I, Domínguez Godino JA, Freitas C, Incera M, Bio A, Domínguez R. Compounded perturbations in coastal areas: contrasting responses to nutrient enrichment and the regime of storm‐related disturbance depend on life‐history traits. Funct Ecol 2017. [DOI: 10.1111/1365-2435.12815] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Iacopo Bertocci
- CIIMAR/CIMAR Centro Interdisciplinar de Investigação Marinha e Ambiental Terminal de Cruzeiros do Porto de Leixões Av. General Norton de Matos s/n 4450‐208 Matosinhos Portugal
- Stazione Zoologica Anton Dohrn Villa Comunale 80121 Naples Italy
| | - Jorge A. Domínguez Godino
- CIIMAR/CIMAR Centro Interdisciplinar de Investigação Marinha e Ambiental Terminal de Cruzeiros do Porto de Leixões Av. General Norton de Matos s/n 4450‐208 Matosinhos Portugal
- CCMAR CIMAR‐Laboratório Associado Universidade do Algarve Gambelas 8005‐139 Faro Portugal
| | - Cristiano Freitas
- CIIMAR/CIMAR Centro Interdisciplinar de Investigação Marinha e Ambiental Terminal de Cruzeiros do Porto de Leixões Av. General Norton de Matos s/n 4450‐208 Matosinhos Portugal
| | - Monica Incera
- CIIMAR/CIMAR Centro Interdisciplinar de Investigação Marinha e Ambiental Terminal de Cruzeiros do Porto de Leixões Av. General Norton de Matos s/n 4450‐208 Matosinhos Portugal
- Centro Tecnológico del Mar – Fundación CETMAR C/Eduardo Cabello s/n E‐36208 Bouzas Vigo Spain
| | - Ana Bio
- CIIMAR/CIMAR Centro Interdisciplinar de Investigação Marinha e Ambiental Terminal de Cruzeiros do Porto de Leixões Av. General Norton de Matos s/n 4450‐208 Matosinhos Portugal
| | - Rula Domínguez
- CIIMAR/CIMAR Centro Interdisciplinar de Investigação Marinha e Ambiental Terminal de Cruzeiros do Porto de Leixões Av. General Norton de Matos s/n 4450‐208 Matosinhos Portugal
- Departamento de Ecoloxía e Bioloxía Animal Faculdade de Ciencias do Mar Universidade de Vigo Vigo Spain
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Bulleri F, Benedetti‐Cecchi L, Jaklin A, Iveša L. Linking disturbance and resistance to invasion via changes in biodiversity: a conceptual model and an experimental test on rocky reefs. Ecol Evol 2016; 6:2010-21. [PMID: 27066222 PMCID: PMC4767907 DOI: 10.1002/ece3.1956] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2015] [Revised: 12/15/2015] [Accepted: 12/16/2015] [Indexed: 11/08/2022] Open
Abstract
Biological invasions threaten biodiversity worldwide. Nonetheless, a unified theory linking disturbance and resistance to invasion through a mechanistic understanding of the changes caused to biodiversity is elusive. Building on different forms of the disturbance-biodiversity relationship and on the Biotic Resistance Hypothesis (BRH), we constructed conceptual models showing that, according to the main biodiversity mechanism generating invasion resistance (complementary vs. identity effects), disturbance can either promote or hinder invasion. Following the Intermediate Disturbance Hypothesis (IDH), moderate levels of disturbance (either frequency or intensity) are expected to enhance species richness. This will promote invasion resistance when complementarity is more important than species identity. Negative effects of severe disturbance on invasion resistance, due to reductions in species richness, can be either overcompensated or exacerbated by species identity effects, depending on the life-traits becoming dominant within the native species pool. Different invasion resistance scenarios are generated when the diversity-disturbance relationship is negative or positive monotonic. Predictions from these models were experimentally tested on rocky reefs. Macroalgal canopies differing in species richness (1 vs. 2 vs. 3) and identity, were exposed to either a moderate or a severe pulse disturbance. The effects of different canopy-forming species on the seaweed, Caulerpa cylindracea, varied from positive (Cystoseira crinita) to neutral (Cystoseira barbata) to negative (Cystoseira compressa). After 2 years, severely disturbed plots were monopolized by C. compressa and supported less C. cylindracea. Our study shows that the effects of disturbance on invasion depend upon its intensity, the main mechanism through which biodiversity generates invasion resistance and the life-traits selected within the native species pool. Disturbance can sustain invasion resistance when promoting the dominance of competitively subordinate species possessing traits that allow outperforming invaders.
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Affiliation(s)
- Fabio Bulleri
- Dipartimento di BiologiaUniversità di PisaVia Derna 156126PisaItaly
| | | | - Andrej Jaklin
- Ruđer Bošković InstituteCenter for Marine ResearchG. Paliaga 552210RovinjCroatia
| | - Ljiljana Iveša
- Ruđer Bošković InstituteCenter for Marine ResearchG. Paliaga 552210RovinjCroatia
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Tamburello L, Maggi E, Benedetti-Cecchi L, Bellistri G, Rattray AJ, Ravaglioli C, Rindi L, Roberts J, Bulleri F. Variation in the impact of non-native seaweeds along gradients of habitat degradation: a meta-analysis and an experimental test. OIKOS 2015. [DOI: 10.1111/oik.02197] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Affiliation(s)
- Laura Tamburello
- Dipto di Biologia; Univ. of Pisa, CoNISMa; via Derna 1 IT-56126 Pisa Italy
| | - Elena Maggi
- Dipto di Biologia; Univ. of Pisa, CoNISMa; via Derna 1 IT-56126 Pisa Italy
| | | | - Giuseppe Bellistri
- Dipto di Biologia; Univ. of Pisa, CoNISMa; via Derna 1 IT-56126 Pisa Italy
| | - Alex James Rattray
- Dipto di Biologia; Univ. of Pisa, CoNISMa; via Derna 1 IT-56126 Pisa Italy
| | - Chiara Ravaglioli
- Dipto di Biologia; Univ. of Pisa, CoNISMa; via Derna 1 IT-56126 Pisa Italy
| | - Luca Rindi
- Dipto di Biologia; Univ. of Pisa, CoNISMa; via Derna 1 IT-56126 Pisa Italy
| | - Jason Roberts
- Marine Geospatial Ecology Laboratory, Nicholas School of the Environment, Duke Univ.; Durham NC 27708 USA
| | - Fabio Bulleri
- Dipto di Biologia; Univ. of Pisa, CoNISMa; via Derna 1 IT-56126 Pisa Italy
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9
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Caronni S, Calabretti C, Delaria MA, Bernardi G, Navone A, Occhipinti-Ambrogi A, Panzalis P, Ceccherelli G. Consumer depletion alters seagrass resistance to an invasive macroalga. PLoS One 2015; 10:e0115858. [PMID: 25723466 PMCID: PMC4344340 DOI: 10.1371/journal.pone.0115858] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2014] [Accepted: 12/02/2014] [Indexed: 11/18/2022] Open
Abstract
Few field studies have investigated how changes at one trophic level can affect the invasibility of other trophic levels. We examined the hypothesis that the spread of an introduced alga in disturbed seagrass beds with degraded canopies depends on the depletion of large consumers. We mimicked the degradation of seagrass canopies by clipping shoot density and reducing leaf length, simulating natural and anthropogenic stressors such as fish overgrazing and water quality. Caulerpa racemosa was transplanted into each plot and large consumers were excluded from half of them using cages. Potential cage artifacts were assessed by measuring irradiance, scouring by leaf movement, water flow, and sedimentation. Algal invasion of the seagrass bed differed based on the size of consumers. The alga had higher cover and size under the cages, where the seagrass was characterized by reduced shoot density and canopy height. Furthermore, canopy height had a significant effect depending on canopy density. The alteration of seagrass canopies increased the spread of C. racemosa only when large consumers were absent. Our results suggest that protecting declining habitats and/or restoring fish populations will limit the expansion of C. racemosa. Because MPAs also enhance the abundance and size of fish consuming seagrass they can indirectly promote algal invasion. The effects of MPAs on invasive species are context dependent and require balancing opposing forces, such as the conservation of seagrass canopy structure and the protection of fish grazing the seagrass.
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Affiliation(s)
- Sarah Caronni
- Department of Earth and Environmental Sciences, University of Pavia, Via S. Epifanio14, I-27100 Pavia, Italy
| | - Chiara Calabretti
- Department of Earth and Environmental Sciences, University of Pavia, Via S. Epifanio14, I-27100 Pavia, Italy
| | - Maria Anna Delaria
- Department of Science for Nature and Environmental Resources, University of Sassari, Via Piandanna 4, I-07100 Sassari, Italy
| | - Giuseppe Bernardi
- Marine Protected Area Tavolara Punta Coda Cavallo, Via Dante 1, I-07026 Olbia (OT), Italy
| | - Augusto Navone
- Marine Protected Area Tavolara Punta Coda Cavallo, Via Dante 1, I-07026 Olbia (OT), Italy
| | - Anna Occhipinti-Ambrogi
- Department of Earth and Environmental Sciences, University of Pavia, Via S. Epifanio14, I-27100 Pavia, Italy
| | - Pieraugusto Panzalis
- Marine Protected Area Tavolara Punta Coda Cavallo, Via Dante 1, I-07026 Olbia (OT), Italy
| | - Giulia Ceccherelli
- Department of Science for Nature and Environmental Resources, University of Sassari, Via Piandanna 4, I-07100 Sassari, Italy
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Ceccherelli G, Pinna S, Cusseddu V, Bulleri F. The role of disturbance in promoting the spread of the invasive seaweed Caulerpa racemosa in seagrass meadows. Biol Invasions 2014. [DOI: 10.1007/s10530-014-0700-7] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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