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Duan Z, Huang K, Huang W, Wang B, Shi J, Xia H, Li F. Bacterial dispersal enhances the elimination of active fecal coliforms during vermicomposting of fruit and vegetable wastes: The overlooked role of earthworm mucus. J Hazard Mater 2024; 471:134280. [PMID: 38636233 DOI: 10.1016/j.jhazmat.2024.134280] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/19/2024] [Revised: 03/21/2024] [Accepted: 04/09/2024] [Indexed: 04/20/2024]
Abstract
Earthworms play a pivotal role in the elimination of fecal coliforms during vermicomposting of fruit and vegetable waste (FVWs). However, the specific mechanisms underlying the action of earthworm mucus remain unclear. This study investigated the mechanisms of fecal coliform reduction related to earthworm mucus during FVWs vermicomposting by comparing treatments with and without earthworms. The results show that the secretion of earthworm mucus decreased by 13.93 % during the startup phase, but significantly (P < 0.001) increased by 57.80 % during the degradation phase. Compared to the control without earthworms, vermicomposting led to a significant (P < 0.05) 1.22 -fold increase in the population of active bacteria, with a strong positive correlation between mucus characteristics and dominant bacterial phyla. As the dominant fecal coliforms, Escherichia coli and Klebsiella pneumoniae significantly (P < 0.05) declined by 86.20 % and 93.38 %, respectively, in the vermi-reactor relative to the control. Bacterial dispersal limitation served as a key factor constraining the elimination of E. coli (r = 0.73, P < 0.01) and K. pneumoniae (r = 0.77, P < 0.001) during vermicomposting. This study suggests that earthworm mucus increases the active bacterial abundance and cooperation by weakening the bacterial dispersal limitation, thus intensifying competition and antagonism between fecal coliforms and other bacteria.
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Affiliation(s)
- Zihao Duan
- School of Environmental and Municipal Engineering, Lanzhou Jiaotong University, Lanzhou 730070, China
| | - Kui Huang
- School of Environmental and Municipal Engineering, Lanzhou Jiaotong University, Lanzhou 730070, China; River Basin Research Center, Gifu University, 1-1 Yanagido, Gifu 501-1193, Japan.
| | - Wenqi Huang
- School of Environmental and Municipal Engineering, Lanzhou Jiaotong University, Lanzhou 730070, China
| | - Bangchi Wang
- School of Environmental and Municipal Engineering, Lanzhou Jiaotong University, Lanzhou 730070, China
| | - Jiwei Shi
- School of Environmental and Municipal Engineering, Lanzhou Jiaotong University, Lanzhou 730070, China
| | - Hui Xia
- School of Environmental and Municipal Engineering, Lanzhou Jiaotong University, Lanzhou 730070, China; River Basin Research Center, Gifu University, 1-1 Yanagido, Gifu 501-1193, Japan
| | - Fusheng Li
- River Basin Research Center, Gifu University, 1-1 Yanagido, Gifu 501-1193, Japan
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Rapp D, Ross C, Cave V, Maclean P, Jauregui R, Brightwell G. Medium-term storage of calf beddings affects bacterial community and effectiveness to inactivate zoonotic bacteria. PLoS One 2023; 18:e0295843. [PMID: 38100478 PMCID: PMC10723701 DOI: 10.1371/journal.pone.0295843] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2023] [Accepted: 11/30/2023] [Indexed: 12/17/2023] Open
Abstract
Land-spreading of animal faecal wastes -such as animal beddings- can introduce zoonotic enteropathogens into the food system environment. The study evaluated the effectiveness of animal beddings naturally contaminated by calf manure to reduce E. coli O157:H7 or Salmonella enterica. The two pathogens were introduced separately as a four strains-cocktail and at high (>6.5 Log10 g-1) concentration into bedding materials, and their inactivation over a 10 weeks-period was monitored by using a Most Probable Number (MPN) enumeration method. Inactivation of E. coli O157:H7 was more effective in the bedding inoculated immediately after collection from calf pens than in the beddings inoculated after a 2 months-pre-storage period: E. coli O157:H7 levels were reduced by 6.6 Log10 g-1 in unstored bedding (0.5 Log10 g-1 recovered; 95%CI: 0.0-1.2), and by 4.9 Log10 g-1 in pre-stored bedding (2.2 Log10 g-1 recovered; 95%CI: 1.5-2.8) with a significant (p<0.05) difference between unstored and pre-stored. S. enterica was inactivated less effectively as counts were reduced by one order of magnitude, with no significant difference in inactivation between unstored and pre-stored beddings. Low levels of naturally occurring E. coli O157 and Salmonella spp. were detected in the non-inoculated beddings, as well as in the straw prior to use in the animal facility. To better understand the possible biological processes involved, the bacterial community present in the beddings was characterised by short-read 16S rRNA sequencing. Pre-storage of the bedding affected the composition but not the diversity of the bacterial community. Analyses of the key bacterial phyla suggested that the presence of a diverse and stable bacterial community might facilitate inactivation of the introduced pathogens, and a possible role of bacterial orders associated with lignocellulolytic resources. Overall, the study contributed to the understanding of the fate of zoonotic bacteria introduced in animal beddings during storage and identified bedding storage practices pre-and post-use in animal facilities that could be important to prevent the risk of zoonosis dissemination to the environment or to the dairy herds.
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Affiliation(s)
- Delphine Rapp
- Food System Integrity, AgResearch Ltd, Hopkirk Research Institute, Palmerston North, New Zealand
| | - Colleen Ross
- Food System Integrity, AgResearch Ltd, Hopkirk Research Institute, Palmerston North, New Zealand
| | - Vanessa Cave
- Data Science Team, AgResearch Ltd, Ruakura Research Centre, Hamilton, New Zealand
| | - Paul Maclean
- Data Science Team, AgResearch Ltd, Grasslands Research Centre, Palmerston North, New Zealand
| | - Ruy Jauregui
- Data Science Team, AgResearch Ltd, Grasslands Research Centre, Palmerston North, New Zealand
| | - Gale Brightwell
- Food System Integrity, AgResearch Ltd, Hopkirk Research Institute, Palmerston North, New Zealand
- New Zealand Food Safety Science & Research Centre, Hopkirk Research Institute, Palmerston North, New Zealand
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Piveteau P, Druilhe C, Aissani L. What on earth? The impact of digestates and composts from farm effluent management on fluxes of foodborne pathogens in agricultural lands. Sci Total Environ 2022; 840:156693. [PMID: 35700775 DOI: 10.1016/j.scitotenv.2022.156693] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/07/2022] [Revised: 06/10/2022] [Accepted: 06/10/2022] [Indexed: 06/15/2023]
Abstract
The recycling of biomass is the cornerstone of sustainable development in the bioeconomy. In this context, digestates and composts from processed agricultural residues and biomasses are returned to the soil. Whether or not the presence of pathogenic microorganisms in these processed biomasses is a threat to the sustainability of the current on-farm practices is still the subject of debate. In this review, we describe the microbial pathogens that may be present in digestates and composts. We then provide an overview of the current European regulation designed to mitigate health hazards linked to the use of organic fertilisers and soil improvers produced from farm biomasses and residues. Finally, we discuss the many factors that underlie the fate of microbial pathogens in the field. We argue that incorporating land characteristics in the management of safety issues connected with the spreading of organic fertilisers and soil improvers can improve the sustainability of biomass recycling.
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Xie Y, Zhu L, Lyu G, Lu L, Ma J, Ma J. Persistence of E. coli O157:H7 in urban recreational waters from Spring and Autumn: a comparison analysis. Environ Sci Pollut Res Int 2022; 29:39088-39101. [PMID: 35098467 DOI: 10.1007/s11356-021-18407-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/25/2021] [Accepted: 12/26/2021] [Indexed: 06/14/2023]
Abstract
People might get infected by pathogens found in urban recreational waters during water-contact activities, such as swimming, boating, bathing, and yachting. However, the persistence of pathogenic bacteria in those waters was not well documented. In this study, persistence of E. coli O157:H7 (EcO157) in 48 water samples (24 Spring samples and 24 Autumn samples) from the 3 urban recreational waters was investigated. Multivariate statistical analysis was performed to correlate survival data with water physicochemical properties and bacterial communities. Our data showed that EcO157 survived longer in Spring samples than in Autumn samples regardless of the lakes. Results revealed that recreational water physicochemical properties and bacterial community in Spring samples were different from those in Autumn samples. Mantel and Partial Mantel tests, as well as co-occurrence network analysis illustrated that EC salinity, TOC, and bacterial community were correlated with survival time (ttd) (p < 0.05). Variation partition analysis (VPA) indicated that bacterial community, EC, TOC, and TN explained about 64.81% of overall ttd variation in Spring samples, and bacterial community, EC, pH, and TP accounted for about 56.59% of overall ttd variation in Autumn samples. Structural equation model (SEM) illustrated that EC indirectly positively affected ttd through bacterial community. The correlation between bacterial community and ttd was negative in Spring samples and positive in Autumn samples. TN appeared a direct positive effect on ttd in Spring samples. TP displayed a direct negative effect on ttd in Autumn samples. Our results concluded that there was seasonal variation in environmental factors that directly or indirectly affected the survival of EcO157 in urban recreational waters.
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Affiliation(s)
- Yuang Xie
- Key Laboratory of Groundwater Resources and Environment, Ministry of Education, Jilin University, Changchun, 130021, China
- Jilin Provincial Key Laboratory of Water Resources and Environment, College of New Energy and Environment, Jilin University, Changchun, 130021, China
| | - Liyue Zhu
- Songliao River Basin Ecology and Environment Administration, Ministry of Ecology and Environment, Changchun, 130021, China
| | - Guangze Lyu
- Key Laboratory of Groundwater Resources and Environment, Ministry of Education, Jilin University, Changchun, 130021, China
| | - Lu Lu
- Key Laboratory of Groundwater Resources and Environment, Ministry of Education, Jilin University, Changchun, 130021, China
| | - Jinhua Ma
- Key Laboratory of Groundwater Resources and Environment, Ministry of Education, Jilin University, Changchun, 130021, China
| | - Jincai Ma
- Key Laboratory of Groundwater Resources and Environment, Ministry of Education, Jilin University, Changchun, 130021, China.
- Jilin Provincial Key Laboratory of Water Resources and Environment, College of New Energy and Environment, Jilin University, Changchun, 130021, China.
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Qian S, Hou R, Yuan R, Zhou B, Chen Z, Chen H. Removal of Escherichia coli from domestic sewage using biological sand filters: Reduction effect and microbial community analysis. Environ Res 2022; 209:112908. [PMID: 35150718 DOI: 10.1016/j.envres.2022.112908] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2021] [Revised: 01/28/2022] [Accepted: 02/05/2022] [Indexed: 06/14/2023]
Abstract
The recycling of sewage is an economical option to solve the water resource pressure. However, to avoid health risks to humans, pathogens in sewage must be removed before reuse. In this study, a biological sand filter (BSF) was used to remove pathogen indicator Escherichia coli (E. coli) from sewage. The biolayer (schmutzdecke layer) formation process of BSFs, operation performance, factors affecting E. coli removal and microbial community structure were evaluated. The results of schmutzdecke layer culture showed that a large number of microorganisms were attached to the upper medium of BSFs. At the same time, the BSFs could reduce both conventional contaminants and E. coli. The E. coli removal experiments revealed that the removal rate of E. coli was about 96.1% at higher effective medium depth (50 cm), the removal rate was about 95% when set hydraulic loading rate (HLR) to 0.16 m3/m2/h and the removal efficiency reached 93.6% at lower influent bacteria concentration. Finally, the microbial community analysis indicated that different BSFs had similar microbial structure, and the microbial abundance in the schmutzdecke layer was higher than that in the bottom layer in the same BSFs. Besides, Biological action played a significant role in the removal of E. coli, including the bacteriolysis of Bdellovibrio and the competition between other bacteria and E. coli. In summary, BSF was a promising technology for removing E. coli from sewage.
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Affiliation(s)
- Shengtao Qian
- School of Energy and Environmental Engineering, Beijing Key Laboratory of Resource-Oriented Treatment of Industrial Pollutants, University of Science and Technology Beijing, Beijing, 100083, China
| | - Rongrong Hou
- School of Energy and Environmental Engineering, Beijing Key Laboratory of Resource-Oriented Treatment of Industrial Pollutants, University of Science and Technology Beijing, Beijing, 100083, China
| | - Rongfang Yuan
- School of Energy and Environmental Engineering, Beijing Key Laboratory of Resource-Oriented Treatment of Industrial Pollutants, University of Science and Technology Beijing, Beijing, 100083, China.
| | - Beihai Zhou
- School of Energy and Environmental Engineering, Beijing Key Laboratory of Resource-Oriented Treatment of Industrial Pollutants, University of Science and Technology Beijing, Beijing, 100083, China
| | - Zhongbing Chen
- Faculty of Environmental Sciences, Czech University of Life Sciences Prague, Kamýcká 129, 16500, Prague, Czech Republic
| | - Huilun Chen
- School of Energy and Environmental Engineering, Beijing Key Laboratory of Resource-Oriented Treatment of Industrial Pollutants, University of Science and Technology Beijing, Beijing, 100083, China.
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Liao J, Li J, Han Z, Lyu G, Ibekwe AM, Ma J. Persistence of Salmonella Typhimurium in apple-pear (Pyrus bretschneideri Rehd.) orchard soils influenced by bacterial communities and soil properties. Sci Total Environ 2021; 768:144458. [PMID: 33444864 DOI: 10.1016/j.scitotenv.2020.144458] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2020] [Revised: 11/30/2020] [Accepted: 12/07/2020] [Indexed: 06/12/2023]
Abstract
2In this study, we investigated the persistence of Salmonella Typhimurium in 26 soil samples from apple-pear orchards in Yanji, Longjing and Helong in northeastern China. The time to reach detection limit (ttds) of Salmonella Typhimurium in soils varied from 20 to 120 days. Redundancy analysis and variation partition analysis elucidated that bacterial communities, clay content, pH, electrical conductivity (EC) salinity, and NO3--N could explain more than 85% of overall variation of the persistence behaviors. Results of structural equation models and Mantel tests revealed that clay content and EC displayed both direct and indirect effect on ttds, while NO3--N and pH exhibited direct and indirect effect on the survival patterns, respectively. Furthermore, Actinobacteria, Acidobacteria and Deltaproteobacteria at class level showed highly close correlations with ttds. Our results revealed that certain biotic and abiotic factors could greatly contribute to the overall persistence of Salmonella in apple-pear orchard soils.
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Affiliation(s)
- Jiafen Liao
- Key Laboratory of Ground Water Resource and Environment, Ministry of Education, Jilin University, Changchun 130021, China; Jilin Provincial Key Laboratory of Water Resources and Environment, Jilin University, Changchun 130021, China
| | - Jiahang Li
- Key Laboratory of Ground Water Resource and Environment, Ministry of Education, Jilin University, Changchun 130021, China
| | - Ziming Han
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Guangze Lyu
- Key Laboratory of Ground Water Resource and Environment, Ministry of Education, Jilin University, Changchun 130021, China
| | - A Mark Ibekwe
- USDA-ARS, U.S. Salinity Laboratory, Riverside, CA 92507, USA
| | - Jincai Ma
- Key Laboratory of Ground Water Resource and Environment, Ministry of Education, Jilin University, Changchun 130021, China; Jilin Provincial Key Laboratory of Water Resources and Environment, Jilin University, Changchun 130021, China.
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Baker CA, De J, Schneider KR. Influence of soil microbes on Escherichia coli O157:H7 survival in soil rinse and artificial soil. J Appl Microbiol 2021; 131:1531-1538. [PMID: 33583119 DOI: 10.1111/jam.15039] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2020] [Revised: 01/10/2021] [Accepted: 02/10/2021] [Indexed: 11/27/2022]
Abstract
AIMS This research investigated the influence of soil microbiota on Escherichia coli O157:H7 survival in soil rinse and artificial soil. Additionally, the influence of selected soil bacteria on E. coli O157:H7 in soil environments was determined. METHODS AND RESULTS Escherichia coli O157:H7 counts (log CFU per ml or g-1 ) were determined by spread plating: (i) artificial soil amended with soil rinse (filter-sterilized and unfiltered) at 30°C; (ii) unfiltered soil rinse (50 ml) treated with cycloheximide (200 μg ml-1 ), vancomycin (40 μg ml-1 ), heat (80°C, 15 min) and no treatment (control) for 7 days at 30°C and (iii) filtered soil rinse with selected soil bacterial isolates over 7 days. There was a significant difference (P = 0·027) in E. coli O157:H7 counts after 35 days between artificial soils amended with filtered (4·45 ± 0·29) and non-filtered (1·83 ± 0·33) soil rinse. There were significant differences (P < 0·05) in E. coli O157:H7 counts after 3 days of incubation between soil rinse treatments (heat (7·04 ± 0·03), cycloheximide (6·94 ± 0·05), vancomycin (4·26 ± 0·98) and control (5·00 ± 0·93)). Lastly, a significant difference (P < 0·05) in E. coli O157:H7 counts was observed after 3 days of incubation at 30°C in filtered soil rinse when incubated with Paenibacillus alvei versus other soil bacterial isolates evaluated. CONCLUSIONS Soil microbiota isolated from Florida sandy soil influenced E. coli O157:H7 survival. Specifically, P. alvei reduced E. coli O157:H7 by over 3 log CFU per ml after 3 days of incubation at 30°C in filtered soil rinse. SIGNIFICANCE AND IMPACT OF THE STUDY This research identified soil bacterial isolates that may reduce E. coli O157:H7 in the soil environment and be used in future biocontrol applications.
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Affiliation(s)
- C A Baker
- Department of Food Science and Human Nutrition, University of Florida, Gainesville, FL, USA
| | - J De
- Department of Food Science and Human Nutrition, University of Florida, Gainesville, FL, USA
| | - K R Schneider
- Department of Food Science and Human Nutrition, University of Florida, Gainesville, FL, USA
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Han Z, Ma J, Yang CH, Ibekwe AM. Soil salinity, pH, and indigenous bacterial community interactively influence the survival of E. coli O157:H7 revealed by multivariate statistics. Environ Sci Pollut Res Int 2021; 28:5575-5586. [PMID: 32974826 DOI: 10.1007/s11356-020-10942-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/16/2020] [Accepted: 09/20/2020] [Indexed: 06/11/2023]
Abstract
Complexities of biotic-abiotic interactions in soils result in the lack of integrated understanding of environmental variables that restrict the survival of shiga toxin-producing E. coli O157:H7. Herein, we reanalyzed previously published data and highlighted the influence of soil abiotic factors on E. coli O157:H7 survivability and elucidated how these factors took effect indirectly through affecting indigenous bacterial community. Interaction network analysis indicated salinity and pH decreased the relative abundances of some bacterial taxa (e.g., Acidobacteria_Gp4, Acidobacteria_Gp6, and Deltaproteobacteria) which were positively correlated with the survival of E. coli O157:H7 in soils, and vice versa (e.g., Gammaproteobacteria and Flavobacteria) (P < 0.05). An array of multivariate statistical approaches including partial Mantel test, variation partition analysis (VPA), and structural equation model (SEM) further confirmed that biotic and abiotic factors interactively shaped the survival profile of E. coli O157:H7. This study revealed that some bacterial taxa were correlated with survival of E. coli O157:H7 directly, and salinity and pH could affect E. coli O157:H7 survival through changing these bacterial taxa. These findings suggest that salinity in soil might benefit the control of fecal pathogenic E. coli invasion, while soil acidification caused by anthropogenic influences could potentially increase the persistence of E. coli O157:H7 in agro-ecosystem.
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Affiliation(s)
- Ziming Han
- Key Laboratory of Ground Water Resource and Environment, Ministry of Education, Jilin University, Changchun, 130021, China
- Jilin Provincial Key Laboratory of Water Resources and Environment, Jilin University, Changchun, 130021, China
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, 100085, China
| | - Jincai Ma
- Key Laboratory of Ground Water Resource and Environment, Ministry of Education, Jilin University, Changchun, 130021, China.
- Jilin Provincial Key Laboratory of Water Resources and Environment, Jilin University, Changchun, 130021, China.
- College of New Energy and Environment, Jilin University, Changchun, 130021, China.
| | - Ching-Hong Yang
- Department of Biological Sciences, University of Wisconsin, Milwaukee, WI, USA
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Ajiboye TO, Babalola SO, Onwudiwe DC. Photocatalytic Inactivation as a Method of Elimination of E. coli from Drinking Water. Applied Sciences 2021; 11:1313. [DOI: 10.3390/app11031313] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
The presence of microorganisms, specifically the Escherichia coli, in drinking water is of global concern. This is mainly due to the health implications of these pathogens. Several conventional methods have been developed for their removal; however, this pathogen is still found in most drinking water. In the continuous quest for a more effective removal approach, photocatalysis has been considered as an alternative method for the elimination of pathogens including E. coli from water. Photocatalysis has many advantages compared to the conventional methods. It offers the advantage of non-toxicity and utilizes the energy from sunlight, thereby making it a completely green route. Since most photocatalysts could only be active in the ultraviolet region of the solar spectrum, which is less than 5% of the entire spectrum, the challenge associated with photocatalysis is the design of a system for the effective harvest and complete utilization of the solar energy for the photocatalytic process. In this review, different photocatalysts for effective inactivation of E. coli and the mechanism involved in the process were reviewed. Various strategies that have been adopted in order to modulate the band gap energy of these photocatalysts have been explored. In addition, different methods of estimating and detecting E. coli in drinking water were presented. Furthermore, different photocatalytic reactor designs for photocatalytic inactivation of E. coli were examined. Finally, the kinetics of E. coli inactivation was discussed.
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Han Z, Huang G, Liao J, Li J, Lyu G, Ma J. Disentangling survival of Escherichia coli O157:H7 in soils: From a subpopulation perspective. Sci Total Environ 2020; 749:141649. [PMID: 32829282 DOI: 10.1016/j.scitotenv.2020.141649] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2020] [Revised: 06/28/2020] [Accepted: 08/10/2020] [Indexed: 06/11/2023]
Abstract
Soil physicochemical properties and microbial community have been proved to be correlated to survival behaviors of Shiga toxin-producing Escherichia coli O157:H7, but the roles of biotic and abiotic factors in the different stages of inactivation process remain unclear. Here, fruit producing soils were collected, and soils physicochemical properties, bacterial and fungal community structure were characterized. Survival experiments were performed by inoculating E. coli O157:H7 in soils. Double Weibull survival model was found to better fit the experimental data, and two subpopulations with different capability on resistance to stress were identified. The sensitive subpopulation with smaller δ (time needed for first decimal reduction) (i.e., δ1) died off faster compared to the more resistant subpopulation with greater δ (i.e., δ2). Partial Mantel test revealed that ttd (time needed to reach detection limit) was jointly influenced by physical factors, chemical factors, and bacterial composition (P < 0.05); δ1 was shaped by physical factors (P < 0.01) and additional bacterial composition (P < 0.05); and δ2 was strongly steered by bacterial community (P < 0.001). Bacterial co-occurrence network analysis revealed that samples with lower δ2 were coupled with higher network complexity and closer taxa relationship (e.g. higher average (weighted) degree, higher network diameter, higher graph density, and lower modularity), and vice versa. Taken together, the sensitive subpopulation had difficulty in adapting to coarse particles conditions, while resistant subpopulation might eventually succumb to the robust biodiversity. This study provides novel insights into the E. coli O157:H7 survival mechanism through subpopulation perspective and sheds light on the reduction of edaphic colonization by pathogens via agricultural management strategy.
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Affiliation(s)
- Ziming Han
- Key Laboratory of Ground Water Resource and Environment, Ministry of Education, Jilin University, Changchun 130021, China; Jilin Provincial Key Laboratory of Water Resources and Environment, Jilin University, Changchun 130021, China; State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Guannan Huang
- Key Laboratory of Ground Water Resource and Environment, Ministry of Education, Jilin University, Changchun 130021, China
| | - Jiafen Liao
- Key Laboratory of Ground Water Resource and Environment, Ministry of Education, Jilin University, Changchun 130021, China
| | - Jiahang Li
- Key Laboratory of Ground Water Resource and Environment, Ministry of Education, Jilin University, Changchun 130021, China
| | - Guangze Lyu
- Key Laboratory of Ground Water Resource and Environment, Ministry of Education, Jilin University, Changchun 130021, China
| | - Jincai Ma
- Key Laboratory of Ground Water Resource and Environment, Ministry of Education, Jilin University, Changchun 130021, China; Jilin Provincial Key Laboratory of Water Resources and Environment, Jilin University, Changchun 130021, China.
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Li J, Chen Q, Li H, Li S, Liu Y, Yang L, Han X. Impacts of different sources of animal manures on dissemination of human pathogenic bacteria in agricultural soils. Environ Pollut 2020; 266:115399. [PMID: 32814181 DOI: 10.1016/j.envpol.2020.115399] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2020] [Revised: 07/17/2020] [Accepted: 08/06/2020] [Indexed: 06/11/2023]
Abstract
The human pathogenic bacteria (HPB) in animal feces may disseminate to agricultural soils with their land application as organic fertilizer. However, the knowledge about the impacts of different sources and rates of animal manures on the temporal changes of soil HPB remains limited, which hamper our ability to estimate the potential risks of their land application. Here, we constructed an HPB database including 565 bacterial strains. By blasting the 16 S rRNA gene sequences against the database we explored the occurrence and fate of HPB in soil microcosms treated with two rates of swine, poultry or cattle manures. A total of 30 HPB were detected in all of manure and soil samples. Poultry manure at the high level obviously improved the abundance of soil HPB. The application of swine manure could introduce concomitant HPB into the soils. Of which, Pseudomonas syringae pv. syringae B728a and Escherichia coli APEC O78 may deserve more attention because of their survival for a few days in manured soils and being possible hosts of diverse antibiotic resistance genes (ARGs) as revealed by co-occurrence pattern. Bayesian source tracking analysis showed that the HPB derived from swine manure had a higher contribution to soil pathogenic communities than those from poultry or cattle manures in early days of incubation. Mantel test together with variation partitioning analysis suggested that bacterial community and soil physicochemical properties were the dominant factors determining the profile of HPB and contributed 64.7% of the total variations. Overall, our results provided experimental evidence that application of animal manures could facilitate the potential dissemination of HPB in soil environment, which should arouse sufficient attention in agriculture practice and management to avoid the threat to human health.
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Affiliation(s)
- Jinyang Li
- School of Water Conservancy and Environment, University of Jinan, Jinan, 250022, China
| | - Qinglin Chen
- Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Parkville, Victoria, 3010, Australia
| | - Helian Li
- School of Water Conservancy and Environment, University of Jinan, Jinan, 250022, China
| | - Shiwei Li
- School of Water Conservancy and Environment, University of Jinan, Jinan, 250022, China
| | - Yinghao Liu
- School of Water Conservancy and Environment, University of Jinan, Jinan, 250022, China
| | - Liyuan Yang
- School of Water Conservancy and Environment, University of Jinan, Jinan, 250022, China
| | - Xuemei Han
- School of Water Conservancy and Environment, University of Jinan, Jinan, 250022, China.
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12
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Baker CA, Lee S, De J, Jeong KC, Schneider KR. Survival of Escherichia coli O157 in autoclaved and natural sandy soil mesocosms. PLoS One 2020; 15:e0234562. [PMID: 32525952 PMCID: PMC7289397 DOI: 10.1371/journal.pone.0234562] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2020] [Accepted: 05/28/2020] [Indexed: 01/14/2023] Open
Abstract
While the soil microbiome may influence pathogen survival, determining the major contributors that reduce pathogen survival is inconclusive. This research was performed to determine the survival of E. coli O157 in autoclaved and natural (unautoclaved) sandy soils. Soils were inoculated with three different E. coli O157 strains (stx1+/stx2+, stx1-/stx2-, and stx1-/stx2+), and enumerated until extinction at 30°C. There was a significant difference in the survival of E. coli O157 based on soil treatment (autoclaved versus natural) at 30°C on days 1 (P = 0.00022), 3, (P = 2.53e-14), 7 (P = 5.59e-16), 14 (P = 1.072e-12), 30 (P = 7.18e-9), and 56 (P = 0.00029), with greater survival in autoclaved soils. The time to extinction (two consecutive negative enrichments) for all three strains was 169 and 84 days for autoclaved and natural soils, respectively. A separate E. coli O157 trial supplemented with 16S rRNA gene sequencing of the soil microbiome was performed at 15°C and 30°C on days 0, 7, 14, and 28 for each soil treatment. Greater species richness (Chao1, P = 2.2e-16) and diversity (Shannon, P = 2.2e-16) was observed in natural soils in comparison with autoclaved soils. Weighted UniFrac (beta-diversity) showed a clear distinction between soil treatments (P = 0.001). The greatest reduction of E. coli O157 was observed in natural soils at 30°C, and several bacterial taxa positively correlated (relative abundance) with time (day 0 to 28) in these soils (P < 0.05), suggesting that the presence of those bacteria might cause the reduction of E. coli O157. Taken together, a clear distinction in E. coli O157 survival, was observed between autoclaved and natural soils along with corresponding differences in microbial diversity in soil treatments. This research provides further insights into the bacterial taxa that may influence E. coli O157 in soils.
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Affiliation(s)
- Christopher A. Baker
- Department of Food Science and Human Nutrition, University of Florida, Gainesville, FL, United States of America
| | - Shinyoung Lee
- Department of Animal Sciences, Emerging Pathogens Institute, University of Florida, Gainesville, FL, United States of America
| | - Jaysankar De
- Department of Food Science and Human Nutrition, University of Florida, Gainesville, FL, United States of America
| | - Kwangcheol C. Jeong
- Department of Animal Sciences, Emerging Pathogens Institute, University of Florida, Gainesville, FL, United States of America
| | - Keith R. Schneider
- Department of Food Science and Human Nutrition, University of Florida, Gainesville, FL, United States of America
- * E-mail:
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13
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Huang G, Liao J, Han Z, Li J, Zhu L, Lyu G, Lu L, Xie Y, Ma J. Interaction between Fungal Communities, Soil Properties, and the Survival of Invading E. coli O157:H7 in Soils. Int J Environ Res Public Health 2020; 17:ijerph17103516. [PMID: 32443436 PMCID: PMC7277763 DOI: 10.3390/ijerph17103516] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/12/2020] [Revised: 05/14/2020] [Accepted: 05/15/2020] [Indexed: 11/16/2022]
Abstract
Pathogens that invade into the soil cancontaminate food and water, andinfect animals and human beings. It is well documented that individual bacterial phyla are well correlated with the survival of E. coliO157 (EcO157), while the interaction betweenthe fungal communities and EcO157 survival remains largely unknown. In this study, soil samples from Tongliao, Siping, and Yanji in northeast China were collected and characterized. Total DNA was extracted for fungal and bacterial community characterization. EcO157 cells were spiked into the soils, and their survival behavior was investigated. Results showed that both fungal and bacterial communities were significantly correlated (p < 0.01) with the survival of EcO157 in soils, and the relative abundances of fungal groups (Dothideomycetes and Sordariomycetes) and some bacterial phyla (Acidobacteria, Firmicutes, gamma- and delta-Proteobacteria)weresignificantly correlated with ttds (p < 0.01). Soil pH, EC (electric conductance) salinity, and water-soluble nitrate nitrogen were significantly correlated with survival time (time to reach the detection limit, ttd) (p < 0.05). The structural equation model indicated that fungal communities could directly influence ttds, and soil properties could indirectly influence the ttds through fungal communities. The first log reduction time (δ) was mainly correlated with soil properties, while the shape parameter (p) was largely correlated with fungal communities. Our data indicated that both fungal and bacterial communities were closely correlated (p < 0.05)with the survival of EcO157 in soils, and different fungal and bacterial groups might play different roles. Fungal communities and bacterial communities explained 5.87% and 17.32% of the overall variation of survival parameters, respectively. Soil properties explained about one-third of the overall variation of survival parameters. These findings expand our current understanding of the environmental behavior of human pathogens in soils.
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Affiliation(s)
- Guannan Huang
- Key Laboratory of Ground Water Resource and Environment, Ministry of Education, Jilin University, Changchun 130021, China;
- Jilin Provincial Key Laboratory of Water Resources and Environment, Jilin University, Changchun 130021, China; (J.L.); (L.Z.); (G.L.); (L.L.); (Y.X.)
| | - Jiafen Liao
- Jilin Provincial Key Laboratory of Water Resources and Environment, Jilin University, Changchun 130021, China; (J.L.); (L.Z.); (G.L.); (L.L.); (Y.X.)
| | - Ziming Han
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; (Z.H.); (J.L.)
| | - Jiahang Li
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; (Z.H.); (J.L.)
| | - Liyue Zhu
- Jilin Provincial Key Laboratory of Water Resources and Environment, Jilin University, Changchun 130021, China; (J.L.); (L.Z.); (G.L.); (L.L.); (Y.X.)
| | - Guangze Lyu
- Jilin Provincial Key Laboratory of Water Resources and Environment, Jilin University, Changchun 130021, China; (J.L.); (L.Z.); (G.L.); (L.L.); (Y.X.)
| | - Lu Lu
- Jilin Provincial Key Laboratory of Water Resources and Environment, Jilin University, Changchun 130021, China; (J.L.); (L.Z.); (G.L.); (L.L.); (Y.X.)
| | - Yuang Xie
- Jilin Provincial Key Laboratory of Water Resources and Environment, Jilin University, Changchun 130021, China; (J.L.); (L.Z.); (G.L.); (L.L.); (Y.X.)
| | - Jincai Ma
- Key Laboratory of Ground Water Resource and Environment, Ministry of Education, Jilin University, Changchun 130021, China;
- Jilin Provincial Key Laboratory of Water Resources and Environment, Jilin University, Changchun 130021, China; (J.L.); (L.Z.); (G.L.); (L.L.); (Y.X.)
- Correspondence: ; Tel.: +86-431-85168429
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14
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Gu L, Wu JY, Hua ZL, Chu KJ. The response of nitrogen cycling and bacterial communities to E. coli invasion in aquatic environments with submerged vegetation. J Environ Manage 2020; 261:110204. [PMID: 32148275 DOI: 10.1016/j.jenvman.2020.110204] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2019] [Revised: 01/20/2020] [Accepted: 01/26/2020] [Indexed: 06/10/2023]
Abstract
The effects of exogenous Escherichia coli on nitrogen cycling (N-cycling) in freshwater remains unclear. Thus, seven ecosystems, six with submerged plants-Potamogeton crispus (PC) and Myriophyllum aquaticum (MA)-and one with no plants were set up. Habitats were assessed before and after E. coli addition (107 colony-forming units/mL). E. coli colonization of freshwater ecosystems had significant effects on bacterial community structure in plant surface biofilms and surface sediments (ANOVA, P < 0.05). It reduced the relative abundance of nitrosification bacteria (-70.94 ± 26.17%) and nitrifiers (-47.86 ± 23.68%) in biofilms which lead to significant reduction of ammoxidation in water (P < 0.05). The N-cycling intensity from PC systems was affected more strongly by E. coli than were MA systems. Furthermore, the coupling coefficient of exogenous E. coli to indigenous N-cycling bacteria in sediments (6.061, average connectivity degree) was significantly weaker than that in biofilms (9.852). Additionally, at the genus level, E. coli were most-closely associated with N-cycling bacteria such as Prosthecobacter, Hydrogenophaga, and Bacillus in sediments and biofilms according to co-occurrence bacterial network (Spearman). E. coli directly changed their abundance, so that the variability of species composition of N-cycling bacterial taxa was triggered, as well. Overall, exogenous E. coli repressed ammoxidation, but promoted ammonification and denitrification. Our results provided new insights into how pathogens influence the nitrogen cycle in freshwater ecosystems.
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Affiliation(s)
- Li Gu
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lake of Ministry of Education, College of Environment, Hohai University, Nanjing 210098, China; National Engineering Research Center of Water Resources Efficient Utilization and Engineering Safety, Hohai University, Nanjing 210098, China
| | - Jian-Yi Wu
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lake of Ministry of Education, College of Environment, Hohai University, Nanjing 210098, China; National Engineering Research Center of Water Resources Efficient Utilization and Engineering Safety, Hohai University, Nanjing 210098, China.
| | - Zu-Lin Hua
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lake of Ministry of Education, College of Environment, Hohai University, Nanjing 210098, China; National Engineering Research Center of Water Resources Efficient Utilization and Engineering Safety, Hohai University, Nanjing 210098, China.
| | - Ke-Jian Chu
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lake of Ministry of Education, College of Environment, Hohai University, Nanjing 210098, China
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15
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Schierstaedt J, Jechalke S, Nesme J, Neuhaus K, Sørensen SJ, Grosch R, Smalla K, Schikora A. Salmonella
persistence in soil depends on reciprocal interactions with indigenous microorganisms. Environ Microbiol 2020; 22:2639-2652. [DOI: 10.1111/1462-2920.14972] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2019] [Revised: 02/27/2020] [Accepted: 03/01/2020] [Indexed: 11/28/2022]
Affiliation(s)
- Jasper Schierstaedt
- Plant‐Microbe SystemsLeibniz Institute of Vegetable and Ornamental Crops Großbeeren Germany
| | - Sven Jechalke
- Institute for Phytopathology, Centre for BioSystems, Land Use and Nutrition, Justus Liebig University Giessen Giessen Germany
| | - Joseph Nesme
- Section of Microbiology, Department of BiologyUniversity of Copenhagen Copenhagen Denmark
| | - Klaus Neuhaus
- ZIEL ‐ Institute for Food & Health, Core Facility Microbiome/NGS, Technische Universität München Freising Germany
| | - Søren J. Sørensen
- Section of Microbiology, Department of BiologyUniversity of Copenhagen Copenhagen Denmark
| | - Rita Grosch
- Plant‐Microbe SystemsLeibniz Institute of Vegetable and Ornamental Crops Großbeeren Germany
| | - Kornelia Smalla
- Institute for Epidemiology and Pathogen Diagnostics, Julius Kühn‐Institut, Federal Research Centre for Cultivated Plants Braunschweig Germany
| | - Adam Schikora
- Institute for Epidemiology and Pathogen Diagnostics, Julius Kühn‐Institut, Federal Research Centre for Cultivated Plants Braunschweig Germany
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16
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Liang C, Yao Z, Du S, Hong M, Wang K, Zhang D. Sediment pH, not the bacterial diversity, determines Escherichia coli O157:H7 survival in estuarine sediments. Environ Pollut 2019; 252:1078-1086. [PMID: 31252105 DOI: 10.1016/j.envpol.2019.06.019] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2019] [Revised: 05/11/2019] [Accepted: 06/05/2019] [Indexed: 06/09/2023]
Abstract
Shiga toxin-producing Escherichia coli (E. coli) O157:H7 is recognized as a hazardous microorganism in the environment. Its longer survival might contribute to higher contamination risk. In this study, E. coli O157:H7 survival in estuarine sediments collected from south Hangzhou Bay was investigated. The survival time of E. coli O157:H7 in estuarine sediments increased with the distance to the water-land junction. Sediment pH was the most important factor in regulating E. coli O157:H7 survival in estuarine sediments. In addition, sediment nutrients and texture also played significant roles in the survival of E. coli O157:H7 in the sediments. On the other hand, bacterial diversity as determined by the alpha-diversity index had no significant effect on E. coli O157:H7 survival. However, specific families of bacteria were closely associated with E. coli O157:H7 survival in the sediments. Remarkably, some potential bacterial groups, e.g., the Desulfobacteraceae, Desulfobulbaceae and Desulfarculaceae families, which are mainly involved in the sulfur cycle, showed significant negative correlation with the E. coli O157:H7 survival in the sediments. On the whole, abiotic factors showed greater effects on E. coli O157:H7 survival in the test sediments than the bacterial community. Our findings provide a comprehensive understanding of E. coli O157:H7 survival and regulatory factors in estuarine sediments, establishing foundation for the prevention of pathogen contamination.
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Affiliation(s)
- Chunling Liang
- School of Marine Sciences, Ningbo University, Ningbo, 315211, China
| | - Zhiyuan Yao
- School of Marine Sciences, Ningbo University, Ningbo, 315211, China; School of Civil and Environmental Engineering, Ningbo University, Ningbo, 315211, China.
| | - Shicong Du
- School of Marine Sciences, Ningbo University, Ningbo, 315211, China
| | - Man Hong
- School of Marine Sciences, Ningbo University, Ningbo, 315211, China
| | - Kai Wang
- School of Marine Sciences, Ningbo University, Ningbo, 315211, China; Collaborative Innovation Center for Zhejiang Marine High-efficiency and Healthy Aquaculture, Ningbo University, Ningbo, 315211, China
| | - Demin Zhang
- School of Marine Sciences, Ningbo University, Ningbo, 315211, China; Collaborative Innovation Center for Zhejiang Marine High-efficiency and Healthy Aquaculture, Ningbo University, Ningbo, 315211, China.
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17
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Zhao XF, Hao YQ, Zhang DY, Zhang QG. Local biotic interactions drive species-specific divergence in soil bacterial communities. ISME J 2019; 13:2846-2855. [PMID: 31358911 DOI: 10.1038/s41396-019-0477-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2018] [Revised: 06/23/2019] [Accepted: 07/05/2019] [Indexed: 11/09/2022]
Abstract
It is well accepted that environmental heterogeneity and dispersal are key factors determining soil bacterial community composition, yet little is known about the role of local biotic interactions. Here we address this issue with an abundance-manipulation experiment that was conducted in a semiarid grassland. We manually increased the abundance of six randomly chosen resident bacterial species in separate, closed, communities and allowed the communities to recover in situ for 1 year. The single episode of increase in the abundance of different species drove species-specific community divergence accompanied by a decline in local diversity. Four of the six added species caused a decrease in the abundance of their closely related species, suggesting an important role of interspecific competition in driving the observed community divergence. Our results also suggested a lack of effective population regulations to force the relative abundance of manipulated species to revert to original level, which would allow persistence of the divergence among soil bacterial communities. We concluded that biotic interactions were important in determining soil bacterial community composition, which could result in substantial variation in soil bacterial community composition in abiotically homogenous environment.
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Affiliation(s)
- Xin-Feng Zhao
- School of Life Sciences, South China Normal University, Guangzhou, 510631, Guangdong, China.,State Key Laboratory of Earth Surface Processes and Resource Ecology and MOE Key Laboratory for Biodiversity Science and Ecological Engineering, Beijing Normal University, Beijing, 100875, China
| | - Yi-Qi Hao
- School of Life Sciences, South China Normal University, Guangzhou, 510631, Guangdong, China. .,State Key Laboratory of Earth Surface Processes and Resource Ecology and MOE Key Laboratory for Biodiversity Science and Ecological Engineering, Beijing Normal University, Beijing, 100875, China.
| | - Da-Yong Zhang
- State Key Laboratory of Earth Surface Processes and Resource Ecology and MOE Key Laboratory for Biodiversity Science and Ecological Engineering, Beijing Normal University, Beijing, 100875, China
| | - Quan-Guo Zhang
- State Key Laboratory of Earth Surface Processes and Resource Ecology and MOE Key Laboratory for Biodiversity Science and Ecological Engineering, Beijing Normal University, Beijing, 100875, China
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18
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Li J, Ding M, Han Z, Ma J. Persistence of Salmonella Typhimurium in Well Waters from a Rural Area of Changchun City, China. Int J Environ Res Public Health 2018; 15:E1090. [PMID: 29843399 DOI: 10.3390/ijerph15061090] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/31/2018] [Revised: 05/21/2018] [Accepted: 05/25/2018] [Indexed: 12/12/2022]
Abstract
Salmonella-contaminated well water could cause major infection outbreaks worldwide, thus, it is crucial to understand their persistence in those waters. In this study, we investigated the persistence of Salmonella enterica serovar Typhimurium in 15 well waters from a rural area of Changchun City, China. Results illustrated that the time to reach detection limit (ttd), first decimal reduction time (δ), and the shape parameter (p) ranged from 15 to 80 days, from 5.6 to 66.9 days, and from 0.6 to 6.6, respectively. Principal component analysis showed that ttds of S. Typhimurium were positively correlated with total organic carbon, pH, NH4+–N, and total phosphate. Multiple stepwise regression analysis revealed that ttds could be best predicted by NH4+–N and pH. Canonical correspondence analysis and variation partition analysis revealed that NH4+–N and pH, and the rest of the water parameters, could explain 27.60% and 28.15% of overall variation of the survival behavior, respectively. In addition, ttds were found to be correlated (p < 0.01) with δ and p. Our results showed that the longer survival (>2.5 months) S. Typhimurium could constitute an increased health risk to the local communities, and provided insights into the close linkage between well water quality and survival of S. Typhimurium.
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19
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Ding M, Li J, Liu X, Li H, Zhang R, Ma J. Exploring links between water quality and E. coli O157:H7 survival potential in well waters from a rural area of southern Changchun City, China. J Water Health 2018; 16:300-310. [PMID: 29676765 DOI: 10.2166/wh.2017.162] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Waterborne infectious disease outbreak associated with well water contamination is a worldwide public health issue, especially for rural areas in developing countries. In the current study, we characterized 20 well water samples collected from a rural area of southern Changchun city, China, and investigated the survival potential of Escherichia coli O157:H7 in those water samples. The results showed that nitrate and ammonia concentrations in some well water samples exceed the corresponding China drinking water standards, indicating potential contamination by local agricultural farms. Our results also revealed that the average survival time (ttd) of E. coli O157:H7 in all well water samples was 30.09 days, with shortest and longest ttd being 17.95 and 58.10 days, respectively. The ttds were significantly correlated with pH and the ratio of total nitrogen to total phosphorus. In addition, it was found that the shape parameter (p) and first decimal reduction parameter (δ) were negatively (P < 0.05) and positively (P < 0.05) correlated to ttd, respectively. Our study showed that E. coli O157:H7 could survive up to two months in well water, suggesting that this pathogen could constitute a great public health risk.
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Affiliation(s)
- Meiyue Ding
- Key Laboratory of Ground Water Resource and Environment, Ministry of Education, Jilin University, Changchun 130021, China E-mail: ; College of Environmental and Resources, Jilin University, 2699 Qianjin St, Changchun 130021, China
| | - Jiahang Li
- College of Environmental and Resources, Jilin University, 2699 Qianjin St, Changchun 130021, China
| | - Xiaodan Liu
- College of Environmental and Resources, Jilin University, 2699 Qianjin St, Changchun 130021, China
| | - Huiru Li
- College of Environmental and Resources, Jilin University, 2699 Qianjin St, Changchun 130021, China
| | - Rui Zhang
- College of Environmental and Resources, Jilin University, 2699 Qianjin St, Changchun 130021, China
| | - Jincai Ma
- Key Laboratory of Ground Water Resource and Environment, Ministry of Education, Jilin University, Changchun 130021, China E-mail: ; College of Environmental and Resources, Jilin University, 2699 Qianjin St, Changchun 130021, China
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20
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Li P, Chen J, Li Y, Zhang K, Wang H. Possible mechanisms of control of Fusarium wilt of cut chrysanthemum by Phanerochaete chrysosporium in continuous cropping fields: A case study. Sci Rep 2017; 7:15994. [PMID: 29167484 PMCID: PMC5700048 DOI: 10.1038/s41598-017-16125-7] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2017] [Accepted: 11/08/2017] [Indexed: 01/28/2023] Open
Abstract
Continuous cropping is a universal challenge in agriculture because it has adverse physiological effects on plants, resulting in stunting, inferior quality, and even massive loss in harvest due to diseases. In this study, Phanerochaete chrysosporium was inoculated into the field in which cut chrysanthemum had already been continuously cropped for five years to control wilt disease. After 120 days of cultivation, the addition of P. chrysosporium significantly improved the physiological status of plants and changed the bacterial and fungal community structure in the soil. The bacterial quantity in the treatment increased by 1.76 times, but the fungal quantity, especially the quantity of Fusarium oxysporum, decreased significantly in comparison with the control. The investigation into the mechanisms of control of Fusarium wilt of cut chrysanthemum by P. chrysosporium showed that P. chrysosporium in soil can inhibit the growth of F. oxysporum and decrease p-hydroxybenzoic acid (HA), which stimulates the propagation of F. oxysporum. Based on current evidence, the inhibition by P. chrysosporium and change in HA appear to be the main causes of the alleviation of wilt disease in the treatment. Other factors, such as nutrients, might also have an influence on the wilt disease of cut chrysanthemum.
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Affiliation(s)
- Ping Li
- Henan Province Engineering Laboratory for Bioconversion Technology of Functional Microbes, College of Life Sciences, Henan Normal University, Xinxiang, 453007, China
| | - Jingchao Chen
- Henan Province Engineering Laboratory for Bioconversion Technology of Functional Microbes, College of Life Sciences, Henan Normal University, Xinxiang, 453007, China
| | - Yi Li
- Henan Province Engineering Laboratory for Bioconversion Technology of Functional Microbes, College of Life Sciences, Henan Normal University, Xinxiang, 453007, China
| | - Kun Zhang
- Henan Province Engineering Laboratory for Bioconversion Technology of Functional Microbes, College of Life Sciences, Henan Normal University, Xinxiang, 453007, China
| | - Hailei Wang
- Henan Province Engineering Laboratory for Bioconversion Technology of Functional Microbes, College of Life Sciences, Henan Normal University, Xinxiang, 453007, China.
- Advanced Environmental Biotechnology Center, Nanyang Environment and Water Research Institute, Nanyang Technological University, Singapore, 637141, Singapore.
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21
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Zhang T, Hu S, Yang W. Variations of Escherichia coli O157:H7 Survival in Purple Soils. Int J Environ Res Public Health 2017; 14:E1246. [PMID: 29057845 PMCID: PMC5664747 DOI: 10.3390/ijerph14101246] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/27/2017] [Revised: 10/03/2017] [Accepted: 10/03/2017] [Indexed: 11/16/2022]
Abstract
Escherichia coli O157:H7 is a well-recognized cause of human illness. Survival of Escherichia coli O157:H7 in five purple soils from Sichuan Province was investigated. The dynamics of E. coli O157:H7 survival in purple soils were described by the Weibull model. Results showed that this model is suitable to fit survival curves of E. coli O157:H7 in purple soils, with the calculated td value (survival time needed to reach the detection limit of 100 CFU·g-1) ranging from 2.99 days to 26.36 days. The longest survival time of E. coli O157:H7 was observed in neutral purple soils (24.49 days), followed by alkalescent purple soil (18.62 days) and acid purple soil (3.48 days). The redundancy analysis (RDA) revealed that td values were significantly enhanced by soil nutrition (total organic carbon (OC), total nitrogen (TN), available potassium (AK) and the ratio of humic acid to fulvic acid (Ha/Fa)), but were significantly suppressed by iron and aluminum oxide.
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Affiliation(s)
- Taoxiang Zhang
- College of Forestry, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
| | - Suping Hu
- College of Forestry, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
| | - Wenhao Yang
- Fujian Provincial Key Laboratory of Soil Environmental Health and Regulation, College of Resources and Environment, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
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22
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Hailei W, Ping L, Ying W, Lei L, Jianming Y. Metagenomic insight into the bioaugmentation mechanism of Phanerochaete chrysosporium in an activated sludge system treating coking wastewater. J Hazard Mater 2017; 321:820-829. [PMID: 27720470 DOI: 10.1016/j.jhazmat.2016.09.072] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/18/2016] [Revised: 08/31/2016] [Accepted: 09/30/2016] [Indexed: 06/06/2023]
Abstract
Phanerochaete chrysosporium was seeded to a sequencing batch reactor treating phenol wastewater. Compared to the contrast reactor (R1), the bioaugmented reactor (R2) exhibits better performance in sludge settling ability, as well as biomass and phenol removal, even though the added fungus is not persistently surviving in the reactor. Bioaugmentation improved bacterial population, growing up to 10,000 times higher than that of eukaryotes. Metagenomic sequencing results show the bioaugmentation finally increases bacterial and eukaryotic richness, but reduces their community diversity. In contrast to R1, bacterial distribution in R2 is more concentrated in Proteobacteria. The relative abundances of filamentous fungi, yeast and microalgae in R2 are all higher than those in R1 at different treatment phases, and two reactors are finally dominated by different protozoan and metazoan. In conclusion, P. chrysosporium improves reactor performances by influencing microbial community structure, and this phenomenon might be attributed to the ecological competition in sludge and toxicity reduction of phenol wastewater. The novelty of this study emphasizes why a species which is not persistently active in bioreactor still plays a crucial role in enhancing reactor performance. Results obtained here impact the conventional criteria for selection of bioaugmentation microbes used in activated sludge systems.
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Affiliation(s)
- Wang Hailei
- College of Life Sciences, Henan Normal University, Xinxiang 453007, China; Institute of Plasma Physics, Chinese Academy of Sciences, Hefei 230031, China.
| | - Li Ping
- College of Life Sciences, Henan Normal University, Xinxiang 453007, China
| | - Wang Ying
- College of Life Sciences, Henan Normal University, Xinxiang 453007, China
| | - Liu Lei
- College of Life Sciences, Henan Normal University, Xinxiang 453007, China
| | - Yao Jianming
- Institute of Plasma Physics, Chinese Academy of Sciences, Hefei 230031, China
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23
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Ma J, Ibekwe AM, Yang CH, Crowley DE. Bacterial diversity and composition in major fresh produce growing soils affected by physiochemical properties and geographic locations. Sci Total Environ 2016; 563-564:199-209. [PMID: 27135583 DOI: 10.1016/j.scitotenv.2016.04.122] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/08/2016] [Revised: 04/14/2016] [Accepted: 04/15/2016] [Indexed: 05/21/2023]
Abstract
Microbial diversity of agricultural soils has been well documented, but information on leafy green producing soils is limited. In this study, we investigated microbial diversity and community structures in 32 (16 organic, 16 conventionally managed soils) from California (CA) and Arizona (AZ) using pyrosequencing, and identified factors affecting bacterial composition. Results of detrended correspondence analysis (DCA) and dissimilarity analysis showed that bacterial community structures of conventionally managed soils were similar to that of organically managed soils; while the bacterial community structures in soils from Salinas, California were different (P<0.05) from those in soils from Yuma, Arizona and Imperial Valley, California. Canonical correspondence analysis (CCA) and artificial neural network (ANN) analysis of bacterial community structures and soil variables showed that electrical conductivity (EC), clay content, water-holding capacity (WHC), pH, total nitrogen (TN), and organic carbon (OC) significantly (P<0.05) correlated with microbial communities. CCA based variation partitioning analysis (VPA) showed that soil physical properties (clay, EC, and WHC), soil chemical variables (pH, TN, and OC) and sampling location explained 16.3%, 12.5%, and 50.9%, respectively, of total variations in bacterial community structure, leaving 13% of the total variation unexplained. Our current study showed that bacterial community composition and diversity in major fresh produce growing soils from California and Arizona is a function of soil physiochemical characteristics and geographic distances of sampling sites.
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Affiliation(s)
- Jincai Ma
- Key Laboratory of Groundwater Resources and Environment, Ministry of Education, Jilin University, Changchun 130021, China; USDA-ARS U. S. Salinity Laboratory, Riverside, CA 92507, United States
| | - A Mark Ibekwe
- USDA-ARS U. S. Salinity Laboratory, Riverside, CA 92507, United States.
| | - Ching-Hong Yang
- Department of Biological Sciences, University of Wisconsin, Milwaukee, WI 53211, United States
| | - David E Crowley
- Department of Environmental Sciences, University of California, Riverside, CA 92521, United States
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24
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Chen Z, Wang H, Ionita C, Luo F, Jiang X. Effects of Chicken Litter Storage Time and Ammonia Content on Thermal Resistance of Desiccation-Adapted Salmonella spp. Appl Environ Microbiol 2015; 81:6883-9. [PMID: 26209673 PMCID: PMC4561697 DOI: 10.1128/aem.01876-15] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2015] [Accepted: 07/20/2015] [Indexed: 11/20/2022] Open
Abstract
Broiler chicken litter was kept as a stacked heap on a poultry farm, and samples were collected up to 9 months of storage. Chicken litter inoculated with desiccation-adapted Salmonella cells was heat-treated at 75, 80, 85, and 150°C. Salmonella populations decreased in all these samples during heat treatment, and the inactivation rates became lower in chicken litter when storage time was extended from 0 to 6 months. There was no significant difference (P > 0.05) in thermal resistance of Salmonella in 6- and 9-month litter samples, indicating that a threshold for thermal resistance was reached after 6 months. Overall, the thermal resistance of Salmonella in chicken litter was affected by the storage time of the litter. The changes in some chemical, physical, and microbiological properties during storage could possibly contribute to this difference. Moisture and ammonia could be two of the most significant factors influencing the thermal resistance of Salmonella cells in chicken litter. Our results emphasize the importance of adjusting time and temperature conditions for heat processing chicken litter when it is removed from the chicken house at different time intervals.
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Affiliation(s)
- Zhao Chen
- Department of Biological Sciences, Clemson University, Clemson, South Carolina, USA
| | - Hongye Wang
- Department of Food, Nutrition, and Packaging Sciences, Clemson University, Clemson, South Carolina, USA
| | - Claudia Ionita
- Department of Food, Nutrition, and Packaging Sciences, Clemson University, Clemson, South Carolina, USA
| | - Feng Luo
- School of Computing, Clemson University, Clemson, South Carolina, USA
| | - Xiuping Jiang
- Department of Food, Nutrition, and Packaging Sciences, Clemson University, Clemson, South Carolina, USA
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25
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Ibekwe AM, Ma J, Crowley DE, Yang CH, Johnson AM, Petrossian TC, Lum PY. Topological data analysis of Escherichia coli O157:H7 and non-O157 survival in soils. Front Cell Infect Microbiol 2014; 4:122. [PMID: 25250242 PMCID: PMC4155871 DOI: 10.3389/fcimb.2014.00122] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2014] [Accepted: 08/18/2014] [Indexed: 02/01/2023] Open
Abstract
Shiga toxin-producing E. coli O157:H7 and non-O157 have been implicated in many foodborne illnesses caused by the consumption of contaminated fresh produce. However, data on their persistence in soils are limited due to the complexity in datasets generated from different environmental variables and bacterial taxa. There is a continuing need to distinguish the various environmental variables and different bacterial groups to understand the relationships among these factors and the pathogen survival. Using an approach called Topological Data Analysis (TDA); we reconstructed the relationship structure of E. coli O157 and non-O157 survival in 32 soils (16 organic and 16 conventionally managed soils) from California (CA) and Arizona (AZ) with a multi-resolution output. In our study, we took a community approach based on total soil microbiome to study community level survival and examining the network of the community as a whole and the relationship between its topology and biological processes. TDA produces a geometric representation of complex data sets. Network analysis showed that Shiga toxin negative strain E. coli O157:H7 4554 survived significantly longer in comparison to E. coli O157:H7 EDL 933, while the survival time of E. coli O157:NM was comparable to that of E. coli O157:H7 EDL 933 in all of the tested soils. Two non-O157 strains, E. coli O26:H11 and E. coli O103:H2 survived much longer than E. coli O91:H21 and the three strains of E. coli O157. We show that there are complex interactions between E. coli strain survival, microbial community structures, and soil parameters.
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Affiliation(s)
- Abasiofiok M Ibekwe
- Agricultural Research Service-US Salinity Laboratory, United States Department of Agriculture Riverside, CA, USA
| | - Jincai Ma
- Agricultural Research Service-US Salinity Laboratory, United States Department of Agriculture Riverside, CA, USA ; Department of Environmental Sciences, University of California Riverside, CA, USA
| | - David E Crowley
- Department of Environmental Sciences, University of California Riverside, CA, USA
| | - Ching-Hong Yang
- Department of Biological Sciences, University of Wisconsin Milwaukee, WI, USA
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26
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Ma J, Mark Ibekwe A, Crowley DE, Yang CH. Persistence of Escherichia coli O157 and non-O157 strains in agricultural soils. Sci Total Environ 2014; 490:822-829. [PMID: 24907617 DOI: 10.1016/j.scitotenv.2014.05.069] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/11/2014] [Revised: 05/02/2014] [Accepted: 05/16/2014] [Indexed: 06/03/2023]
Abstract
Shiga toxin producing Escherichia coli O157 and non-O157 serogroups are known to cause serious diseases in human. However, research on the persistence of E. coli non-O157 serogroups in preharvest environment is limited. In the current study, we compared the survival behavior of E. coli O157 to that of non-O157 E. coli strains in agricultural soils collected from three major fresh produce growing areas of California (CA) and Arizona (AZ). Results showed that the nonpathogenic E. coli O157:H7 4554 survived longer than the pathogenic E. coli O157:H7 EDL933 in Imperial Valley CA and Yuma AZ, but not in soils from the Salinas area. However, E. coli O157:NM was found to persist significantly longer than E. coli O157:H7 EDL933 in all soil tested from the three regions. Furthermore, two non-O157 (E. coli O26:H21 and E. coli O103:H2) survived significantly longer than E. coli O157:H7 EDL933 in all soils tested. Pearson correlation analysis showed that survival of the E. coli strains was affected by different environmental factors. Our data suggest that survival of E. coli O157 and non-O157 may be strain and soil specific, and therefore, care must be taken in data interpretation with respect to survival of this pathogen in different soils.
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Affiliation(s)
- Jincai Ma
- USDA-ARS U. S. Salinity Laboratory, Riverside, CA 92507, United States; Department of Environmental Sciences, University of California, Riverside, CA 92521, United States
| | - A Mark Ibekwe
- USDA-ARS U. S. Salinity Laboratory, Riverside, CA 92507, United States.
| | - David E Crowley
- Department of Environmental Sciences, University of California, Riverside, CA 92521, United States
| | - Ching-Hong Yang
- Department of Biological Sciences, University of Wisconsin, Milwaukee, WI 53211, United States
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27
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Wang H, Ibekwe AM, Ma J, Wu L, Lou J, Wu Z, Liu R, Xu J, Yates SR. A glimpse of Escherichia coli O157:H7 survival in soils from eastern China. Sci Total Environ 2014; 476-477:49-56. [PMID: 24463024 DOI: 10.1016/j.scitotenv.2014.01.004] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2013] [Revised: 01/02/2014] [Accepted: 01/02/2014] [Indexed: 06/03/2023]
Abstract
Escherichia coli O157:H7 (E. coli O157:H7) is an important food-borne pathogen, which continues to be a major public health concern worldwide. It is known that E. coli O157:H7 survive in soil environment might result in the contamination of fresh produce or water source. To investigate how the soils and their properties affect E. coli O157:H7 survival, we studied E. coli O157:H7 survival dynamics in 14 soils collected in eastern China from the warm-temperate zone to subtropical zone. Results showed that E. coli O157:H7 survival as a function of time can be well described by the Weibull model. The calculated td values (survival time to reach the detection limit, 100 colony forming units per gram oven-dried weight of soil) for the test soils were between 1.4 and 25.8 days. A significantly longer survival time (td) was observed in neutral or alkaline soils from north-eastern China (the warm-temperate zone) than that in acidic soils from south-eastern China (the subtropical zone). Distinct E. coli O157:H7 survival dynamics was related to soil properties. Stepwise multiple regression analysis revealed that the td values were significantly enhanced by soil microbial biomass carbon and total nitrogen, but were significantly reduced by amorphous Al2O3 and relative abundance of Chloroflexi. It should pay more attention to E. coli O157:H7 long survival in soils and its potential environmental contamination risk.
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Affiliation(s)
- Haizhen Wang
- Zhejiang Provincial Key Laboratory of Subtropical Soil and Plant Nutrition, College of Environmental and Natural Resource Sciences, Zhejiang University, Hangzhou 310058, China; USDA-ARS, U.S. Salinity Laboratory, Riverside, CA 92507, USA; Department of Environmental Sciences, University of California, Riverside, CA 92521, USA
| | - A Mark Ibekwe
- USDA-ARS, U.S. Salinity Laboratory, Riverside, CA 92507, USA
| | - Jincai Ma
- USDA-ARS, U.S. Salinity Laboratory, Riverside, CA 92507, USA; Department of Environmental Sciences, University of California, Riverside, CA 92521, USA
| | - Laosheng Wu
- Zhejiang Provincial Key Laboratory of Subtropical Soil and Plant Nutrition, College of Environmental and Natural Resource Sciences, Zhejiang University, Hangzhou 310058, China; Department of Environmental Sciences, University of California, Riverside, CA 92521, USA
| | - Jun Lou
- Zhejiang Provincial Key Laboratory of Subtropical Soil and Plant Nutrition, College of Environmental and Natural Resource Sciences, Zhejiang University, Hangzhou 310058, China
| | - Zhigang Wu
- Department of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA
| | - Renyi Liu
- Department of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA
| | - Jianming Xu
- Zhejiang Provincial Key Laboratory of Subtropical Soil and Plant Nutrition, College of Environmental and Natural Resource Sciences, Zhejiang University, Hangzhou 310058, China.
| | - Scott R Yates
- USDA-ARS, U.S. Salinity Laboratory, Riverside, CA 92507, USA.
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28
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Zhang T, Wang H, Wu L, Lou J, Wu J, Brookes PC, Xu J. Survival of Escherichia coli O157:H7 in soils from Jiangsu Province, China. PLoS One 2013; 8:e81178. [PMID: 24312534 PMCID: PMC3846838 DOI: 10.1371/journal.pone.0081178] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2013] [Accepted: 10/09/2013] [Indexed: 11/18/2022] Open
Abstract
Escherichia coli O157:H7 (E. coli O157:H7) is recognized as a hazardous microorganism in the environment and for public health. The E. coli O157:H7 survival dynamics were investigated in 12 representative soils from Jiangsu Province, where the largest E. coli O157:H7 infection in China occurred. It was observed that E. coli O157:H7 declined rapidly in acidic soils (pH, 4.57 – 5.14) but slowly in neutral soils (pH, 6.51 – 7.39). The survival dynamics were well described by the Weibull model, with the calculated td value (survival time of the culturable E. coli O157:H7 needed to reach the detection limit of 100 CFU g−1) from 4.57 days in an acidic soil (pH, 4.57) to 34.34 days in a neutral soil (pH, 6.77). Stepwise multiple regression analysis indicated that soil pH and soil organic carbon favored E. coli O157:H7 survival, while a high initial ratio of Gram-negative bacteria phospholipid fatty acids (PLFAs) to Gram-positive bacteria PLFAs, and high content of exchangeable potassium inhibited E. coli O157:H7 survival. Principal component analysis clearly showed that the survival profiles in soils with high pH were different from those with low pH.
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Affiliation(s)
- Taoxiang Zhang
- College of Environmental and Natural Resource Sciences, Zhejiang Provincial Key Laboratory of Subtropical Soil and Plant Nutrition, Zhejiang University, Hangzhou, China
| | - Haizhen Wang
- College of Environmental and Natural Resource Sciences, Zhejiang Provincial Key Laboratory of Subtropical Soil and Plant Nutrition, Zhejiang University, Hangzhou, China
- * E-mail: (HW); (JX)
| | - Laosheng Wu
- College of Environmental and Natural Resource Sciences, Zhejiang Provincial Key Laboratory of Subtropical Soil and Plant Nutrition, Zhejiang University, Hangzhou, China
| | - Jun Lou
- College of Environmental and Natural Resource Sciences, Zhejiang Provincial Key Laboratory of Subtropical Soil and Plant Nutrition, Zhejiang University, Hangzhou, China
| | - Jianjun Wu
- College of Environmental and Natural Resource Sciences, Zhejiang Provincial Key Laboratory of Subtropical Soil and Plant Nutrition, Zhejiang University, Hangzhou, China
| | - Philip C. Brookes
- College of Environmental and Natural Resource Sciences, Zhejiang Provincial Key Laboratory of Subtropical Soil and Plant Nutrition, Zhejiang University, Hangzhou, China
| | - Jianming Xu
- College of Environmental and Natural Resource Sciences, Zhejiang Provincial Key Laboratory of Subtropical Soil and Plant Nutrition, Zhejiang University, Hangzhou, China
- * E-mail: (HW); (JX)
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29
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Erickson M, Habteselassie M, Liao J, Webb C, Mantripragada V, Davey L, Doyle M. Examination of factors for use as potential predictors of human enteric pathogen survival in soil. J Appl Microbiol 2013; 116:335-49. [DOI: 10.1111/jam.12373] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2013] [Revised: 10/04/2013] [Accepted: 10/21/2013] [Indexed: 11/29/2022]
Affiliation(s)
- M.C. Erickson
- Department of Food Science and Technology; Center for Food Safety; Griffin GA USA
| | - M.Y. Habteselassie
- Department of Food Science and Technology; Center for Food Safety; Griffin GA USA
- Department of Crops and Soil Science; University of Georgia; Griffin GA USA
| | - J. Liao
- Department of Food Science and Technology; Center for Food Safety; Griffin GA USA
| | - C.C. Webb
- Department of Food Science and Technology; Center for Food Safety; Griffin GA USA
| | - V. Mantripragada
- Department of Crops and Soil Science; University of Georgia; Griffin GA USA
| | - L.E. Davey
- Department of Food Science and Technology; Center for Food Safety; Griffin GA USA
| | - M.P. Doyle
- Department of Food Science and Technology; Center for Food Safety; Griffin GA USA
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30
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Yao Z, Wang H, Wu L, Wu J, Brookes PC, Xu J. Interaction between the microbial community and invading Escherichia coli O157:H7 in soils from vegetable fields. Appl Environ Microbiol 2014; 80:70-6. [PMID: 24123745 DOI: 10.1128/AEM.03046-13] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023] Open
Abstract
The survival of Escherichia coli O157:H7 in soils can contaminate vegetables, fruits, drinking water, etc. However, data on the impact of E. coli O157:H7 on soil microbial communities are limited. In this study, we monitored the changes in the indigenous microbial community by using the phospholipid fatty acid (PLFA) method to investigate the interaction of the soil microbial community with E. coli O157:H7 in soils. Simple correlation analysis showed that the survival of E. coli O157:H7 in the test soils was negatively correlated with the ratio of Gram-negative (G(-)) to Gram-positive (G(+)) bacterial PLFAs (G(-)/G(+) ratio). In particular, levels of 14 PLFAs were negatively correlated with the survival time of E. coli O157:H7. The contents of actinomycetous and fungal PLFAs in the test soils declined significantly (P, <0.05) after 25 days of incubation with E. coli O157:H7. The G(-)/G(+) ratio declined slightly, while the ratio of bacterial to fungal PLFAs (B/F ratio) and the ratio of normal saturated PLFAs to monounsaturated PLFAs (S/M ratio) increased, after E. coli O157:H7 inoculation. Principal component analysis results further indicated that invasion by E. coli O157:H7 had some effects on the soil microbial community. Our data revealed that the toxicity of E. coli O157:H7 presents not only in its pathogenicity but also in its effect on soil microecology. Hence, close attention should be paid to the survival of E. coli O157:H7 and its potential for contaminating soils.
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