1
|
Gillani SW, Ahmad M, Manzoor M, Waheed M, Tribsch A, Shaheen H, Mehmood AB, Fonge BA, Al-Andal A. Synergizing population structure, habitat preferences, and ecological drivers for conservation of Cedrus deodara. BMC PLANT BIOLOGY 2025; 25:599. [PMID: 40335897 PMCID: PMC12057084 DOI: 10.1186/s12870-025-06664-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/06/2025] [Accepted: 05/02/2025] [Indexed: 05/09/2025]
Abstract
BACKGROUND Climate change is impacting forest tree species adversely and making the ecological system vulnerable. The Himalayan cedar (Cedrus deodara), a keystone species in Western Himalayan forests, plays an important ecological role but is under increasing threats from natural and anthropogenic pressures. The current study analyses the population structure, spatial distribution, environmental factors, and future conservation strategies for Himalayan cedar populations in the Kashmir Himalayas. METHODS Field sampling was carried out between 2023 and 2024 in various districts of the Kashmir Himalayas. The quadrat method was used to record the vegetation data across an elevational gradient ranging from 1300 to 2700 m. GIS and spatial analysis were used to map population distribution while, cluster analysis was performed to identify species associations. Canonical Correspondence Analysis (CCA) was applied to identify the influence of environmental factors while, Non-Metric Multidimensional Scaling (NMDS) and SIMPER analysis were used to investigate inter-association dissimilarity. RESULTS The populations showed an average stem density of 110.73 trees/ha and low regeneration rates, with just 15 seedlings per ha on average. Stump density (mean: 90.62 stumps/ha) demonstrated human-induced pressures. GIS and spatial analysis revealed that Cedar populations were mostly found at altitudes ranging from 1900 to 2200 m, with a preference for north-facing slopes. Cluster analysis identified four distinct species associations in which each with a different species richness and ecological composition. Association 3 was the most diverse (Shannon index: 3.31 ± 0.05), while Association 4 showed the highest dominance (0.062 ± 0.002). Canonical Correspondence Analysis (CCA) identified altitude and timber extraction as the key drivers of variation, accounting for 16.2% and 15.2% of the distribution variance, respectively. Grazing, erosion, and fire accelerated the degradation of habitat. Cedar density was influenced by various edaphic parameters, with total nitrogen (R2 = 0.11) and soil moisture (R2 = 0.09) demonstrating the strongest association. Soil pH, electrical conductivity, and total phosphorus exhibited minimal or negligible effects. Associations 1 and 2 were associated with increased soil pH and electrical conductivity, but Associations 3 and 4 were influenced more by nutrient-rich and moisture-retentive soils. Non-Metric Multidimensional Scaling (NMDS) and SIMPER analysis identified a 56.99% dissimilarity between associations, mostly driven by species such as Parrotiopsis jacquemontiana and Viburnum grandiflorum. CONCLUSION The study reveals that Himalayan cedar populations in the Kashmir Himalayas face low regeneration rates and significant anthropogenic pressure. Their distribution is influenced by various factors, including altitude, timber extraction, soil nitrogen, moisture, grazing, erosion, and fire. These findings highlight the necessity for targeted conservation strategies. Future conservation strategies should encompass controlled grazing, regulated timber extraction, soil conservation measures, anti-logging policies, ecotourism initiatives, and collaboration among local communities and policymakers.
Collapse
Affiliation(s)
- Syed Waseem Gillani
- Department of Plant Sciences, Quaid-I-Azim University, Islamabad, 45320, Pakistan
- Department of Environment & Biodiversity, University of Salzburg, Salzburg, Austria
| | - Mushtaq Ahmad
- Department of Plant Sciences, Quaid-I-Azim University, Islamabad, 45320, Pakistan
| | - Muhammad Manzoor
- Department of Plant Sciences, Quaid-I-Azim University, Islamabad, 45320, Pakistan
- Department of Environment & Biodiversity, University of Salzburg, Salzburg, Austria
| | - Muhammad Waheed
- Department of Botany, University of Okara, Okara, 56300, Pakistan
| | - Andreas Tribsch
- Department of Environment & Biodiversity, University of Salzburg, Salzburg, Austria
| | - Hamayun Shaheen
- Department of Botany, University of Azad Jammu and Kashmir, Muzaffarabad, 13100, Pakistan
| | - Abdul Basit Mehmood
- Department of Botany, University of Azad Jammu and Kashmir, Muzaffarabad, 13100, Pakistan
| | - Beatrice Ambo Fonge
- Department of Plant Science, University of Buea, PO BOX 63, Fako, Buea, Division South West Region, Cameroon.
| | - Abeer Al-Andal
- Department of Biology, College of Science, King Khalid University, Abha, 61413, Saudi Arabia
| |
Collapse
|
2
|
Litavský J, Majzlan O, Langraf V, Žarnovičan H. Influence of habitat management and selected environmental parameters on the ground-living communities of harvestmen (Opiliones) in the historical park in Rusovce (Slovakia). ENVIRONMENTAL MONITORING AND ASSESSMENT 2024; 196:1056. [PMID: 39404811 PMCID: PMC11480153 DOI: 10.1007/s10661-024-13233-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/08/2024] [Accepted: 10/10/2024] [Indexed: 10/19/2024]
Abstract
City parks serve as valuable refuges for invertebrates in the urban environment, which are constantly exposed to human influence caused by management practices in the parks. Many harvestman species are suitable bioindicators for monitoring ecological change; however, their effective use in environmental assessment necessitates to expand the insufficient knowledge of ecological environmental specificities of their communities. We studied the diversity and dynamics of harvestman (Opiliones) communities in the historical park in Rusovce, situated in the southwestern part of Bratislava (Slovakia). Seven study sites were investigated, representing areas subjected to different management practices. The research was conducted from March 2019 to April 2020, using pitfall traps. We evaluated the impact of microclimatic variables (soil and air temperature), environmental characteristics (plant diversity and cover of vegetation layers, age of forest stands, thickness of the litter layer), and management practices on the structure of harvestman communities. The study revealed the response of specific harvestman species to temperature variations, emphasizing the importance of microclimatic conditions. Environmental variables, such as the richness of plant species in the shrub layer, the cover of the herb and shrub vegetation layers, and the age of the forest stands, were identified as key factors that influence the dispersal of harvestman species. Furthermore, management practices, especially the presence of monoculture tree plantations, significantly affected the species composition of harvestmen. Examining the sensitivity of Opiliones, important bioindicators, to these factors is crucial for implementing effective conservation strategies in urban green spaces and anthropogenically influenced ecosystems.
Collapse
Affiliation(s)
- Juraj Litavský
- Department of Environmental Ecology and Landscape Management, Faculty of Natural Sciences, Comenius University in Bratislava, Mlynská Dolina, Ilkovičova 6, 842 15, Bratislava, Slovakia.
| | - Oto Majzlan
- Department of Environmental Ecology and Landscape Management, Faculty of Natural Sciences, Comenius University in Bratislava, Mlynská Dolina, Ilkovičova 6, 842 15, Bratislava, Slovakia
| | - Vladimír Langraf
- Department of Zoology and Anthropology, Faculty of Natural Sciences and Informatics, Constantine the Philosopher University in Nitra, Trieda Andreja Hlinku 1, 949 74, Nitra, Slovakia
| | - Hubert Žarnovičan
- Department of Environmental Ecology and Landscape Management, Faculty of Natural Sciences, Comenius University in Bratislava, Mlynská Dolina, Ilkovičova 6, 842 15, Bratislava, Slovakia
| |
Collapse
|
3
|
Louisson Z, Gutiérrez-Ginés MJ, Taylor M, Buckley HL, Hermans SM, Lear G. Soil conditions are a more important determinant of microbial community composition and functional potential than neighboring plant diversity. iScience 2024; 27:110056. [PMID: 38883816 PMCID: PMC11176639 DOI: 10.1016/j.isci.2024.110056] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2023] [Revised: 04/14/2024] [Accepted: 05/17/2024] [Indexed: 06/18/2024] Open
Abstract
Replanting is an important tool for ecological recovery. Management strategies, such as planting areas with monocultures or species mixtures, have implications for restoration success. We used 16S and ITS rRNA gene amplicon sequencing and shotgun metagenomics to assess how the diversity of neighboring tree species impacted soil bacterial and fungal communities, and their functional potential, within the root zone of mānuka (Leptospermum scoparium) trees. We compared data from monoculture and mixed tree species plots and confirmed that soil microbial taxonomic and functional community profiles significantly differed (p < 0.001). Compared to the diversity of neighboring tree species within the plot, soil environmental conditions and geographic distance was more important for structuring the microbial communities. The bacterial communities appeared more impacted by soil conditions, while the fungal communities displayed stronger spatial structuring, possibly due to wider bacterial dispersal. The different mechanisms structuring bacterial and fungal communities could have implications for ecological restoration outcomes.
Collapse
Affiliation(s)
- Ziva Louisson
- School of Biological Sciences, University of Auckland, 3a Symonds Street, Auckland 1010, New Zealand
| | - Maria J Gutiérrez-Ginés
- Institute of Environmental Science and Research Ltd., 27 Creyke Road, Ilam, Christchurch 8041, New Zealand
| | - Matthew Taylor
- Waikato Regional Council, 160 Ward St, Hamilton 3204, New Zealand
| | - Hannah L Buckley
- School of Science, Auckland University of Technology, 34 St Paul Street, Auckland 1010, New Zealand
| | - Syrie M Hermans
- School of Science, Auckland University of Technology, 34 St Paul Street, Auckland 1010, New Zealand
| | - Gavin Lear
- School of Biological Sciences, University of Auckland, 3a Symonds Street, Auckland 1010, New Zealand
| |
Collapse
|
4
|
Wildermuth B, Seifert CL, Husemann M, Schuldt A. Metabarcoding reveals that mixed forests mitigate negative effects of non-native trees on canopy arthropod diversity. ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2023; 33:e2921. [PMID: 37776039 DOI: 10.1002/eap.2921] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Revised: 07/13/2023] [Accepted: 08/18/2023] [Indexed: 10/01/2023]
Abstract
Averting climate change-induced forest diebacks increasingly relies on tree species planted outside of their natural range and on the addition of non-native tree species to mixed-species forests. However, the consequences of such changes for associated biodiversity remain poorly understood, especially for the forest canopy as a largely understudied forest stratum. Here, we used flight interception traps and a metabarcoding approach to study the taxonomic and functional (trophic guilds) composition and taxon richness of canopy arthropods. We sampled 15 monospecific and mixed stands of native European beech, native Norway spruce-planted outside its natural range-and non-native Douglas fir in northwest Germany. We found that the diversity of arthropods was lower in non-native Douglas fir compared with native beech stands. Taxon richness of herbivores was reduced by both conifer species. Other functional guilds, however, were not affected by stand type. Arthropod composition differed strongly between native broadleaved beech and monospecific coniferous (native spruce or non-native Douglas fir) stands, with less pronounced differences between the native and non-native conifers. Beech-conifer mixtures consistently hosted intermediate arthropod diversity and community composition compared with the respective monospecific stands. Moreover, arthropod diversity had a positive relationship with the number of canopy microhabitats. Our study shows that considering arthropod taxa of multiple functional groups reveals the multifaceted impact of non-native tree species on forest canopy arthropod communities. Contrasting with previous studies that primarily focused on the forest floor, we found that native beech hosts a rich diversity of arthropods, compared with lower diversity and distinct communities in economically attractive, and especially in non-native, conifers with few canopy microhabitats. Broadleaf-conifer mixtures did not perform better than native beech stands, but mitigated the negative effects of conifers, making such mixtures a compromise to foster both forest-associated diversity and economic yield.
Collapse
Affiliation(s)
- Benjamin Wildermuth
- Department of Forest Nature Conservation, University of Göttingen, Göttingen, Germany
| | - Carlo L Seifert
- Department of Forest Nature Conservation, University of Göttingen, Göttingen, Germany
| | - Martin Husemann
- Museum of Nature, Leibniz Institute for the Analysis of Biodiversity Change, Hamburg, Germany
| | - Andreas Schuldt
- Department of Forest Nature Conservation, University of Göttingen, Göttingen, Germany
| |
Collapse
|
5
|
Barnes EE, Murphy SM. Bottom-up and top-down pressures mediate competition between two generalist insects. Ecology 2023; 104:e3957. [PMID: 36519183 DOI: 10.1002/ecy.3957] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/14/2021] [Revised: 10/25/2022] [Accepted: 11/03/2022] [Indexed: 12/23/2022]
Abstract
The effects of competition can have far-reaching consequences for individuals, populations, and communities and therefore we should strive toward a deeper understanding of competitive interactions. In some cases, dietary generalists may be predicted to experience weak competition effects because of their ability to use a wide range of host plants. However, competition between insects frequently occurs indirectly, which can hinder insects' abilities to avoid competitive interactions. Therefore, competition may be as strong among dietary generalists as among dietary specialists. Yet competition between insects that are dietary generalists is infrequently studied. We tested for evidence of competitive interactions between two common, temporally separated, generalist insects: the western tent caterpillar (Malacosoma californicum), which feeds early in the season, and the fall webworm (Hyphantria cunea), which feeds later in the season. Both species frequently use a common host plant species (chokecherry) as a preferred host at our field sites. We tested the relative strength of bottom-up effects resulting from competitive interactions between these two generalists with laboratory-rearing trials at the relevant time of year for each insect. We recorded three common fitness measures (development time, pupal mass, and survival) for caterpillars reared on chokecherry with no damage from either of our focal species, with tent caterpillar damage, and with fall webworm damage. To test the strength of top-down pressures on fall webworm larval fitness and any potential interactions with bottom-up effects, we reared larvae in the field either exposed to or protected from predators on host plants that either did or did not have tent caterpillars feeding on them earlier in the season. We found evidence of bottom-up fitness effects on tent caterpillars and top-down and bottom-up fitness effects on fall webworms confirming that tent caterpillars and fall webworms compete indirectly. Tent caterpillars had lower pupal mass when reared on leaves from shrubs damaged by fall webworms. Fall webworms had lower pupal mass and longer development time when reared on leaves from shrubs damaged by tent caterpillars. In field trials, fall webworms reared on shrubs damaged by tent caterpillars had a lower survival and pupal mass. We show evidence of indirect competition in temporally separated generalists through leaf quality (bottom-up effects) and natural enemies (top-down effects).
Collapse
Affiliation(s)
- Elizabeth E Barnes
- Department of Biological Sciences, University of Denver, Denver, Colorado, USA
| | - Shannon M Murphy
- Department of Biological Sciences, University of Denver, Denver, Colorado, USA
| |
Collapse
|
6
|
Diversity and conservation of higher plants in Northwest Yunnan-Southeast Tibet. Glob Ecol Conserv 2023. [DOI: 10.1016/j.gecco.2023.e02396] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023] Open
|
7
|
Klimova A, Rodríguez‐Estrella R, Meng G, Gutiérrez‐Rivera JN, Jimenez‐Jimenez ML, Liu S. Metabarcoding reveals seasonal and spatial patterns of arthropod community assemblages in two contrasting habitats: Desert and oasis of the Baja California Peninsula, Mexico. DIVERS DISTRIB 2023. [DOI: 10.1111/ddi.13672] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023] Open
Affiliation(s)
- Anastasia Klimova
- Centro de Investigaciones Biológicas del Noroeste S.C. La Paz Mexico
| | | | - Guanliang Meng
- Zoological Research Museum Alexander Koenig, Leibniz Institute for the Analysis of Biodiversity Change Bonn Germany
| | | | | | - Shanlin Liu
- Department of Entomology, College of Plant Protection China Agricultural University Beijing China
| |
Collapse
|
8
|
Shi X, Sun G, Yang X, Gao J, Tan L, Song Y, Hu Y, Zhou Z, Zhao H, Hu Z, Zhu S, Cao Y, Liao R, Chen W, Wu Z, Guan X, Ren X, Zhang S. Result of a year-long animal survey in a state-owned forest farm in Beijing, China. Biodivers Data J 2022; 10:e91132. [PMID: 36761514 PMCID: PMC9836563 DOI: 10.3897/bdj.10.e91132] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Accepted: 09/29/2022] [Indexed: 11/12/2022] Open
Abstract
Background Artificial forest can have great potential in serving as habitat to wildlife, depending on different management methods. As the state-owned forest farms now play a new role in ecological conservation in China, the biological richness of this kind of land-use type is understudied. Once owned by a mining company, a largest state-owned forest farm, Jingxi Forest Farm, has been reformed to be a state-owned forest farm with the purpose of conservation since 2017. Although this 116.4 km2 forest farm holds a near-healthy montaine ecosystem very representative in North China, a large proportion of artificial coniferous forest in the forest farm has been proven to hold less biodiversity than natural vegetation. This situation, however, provides a great opportunity for ecological restoration and biodiversity conservation. Therefore, from November 2019 to December 2020, we conducted a set of biodiversity surveys, whose results will serve as a baseline for further restoration and conservation. New information Here, we report the result of a multi-taxa fauna diversity survey conducted in Jingxi Forest Farm mainly in year 2020 with explicit spatial information. It is the first survey of its kind conducted in this area, revealing a total of 19 species of mammals, 86 birds, four reptiles, two amphibians and one fish species, as well as 101 species of insects. Four species of mammals are identified as data-poor species as they have less than 100 occurrence records with coordination in the GBIF database. One species of insect, representing one new provincial record genus of Beijing, is reported.
Collapse
Affiliation(s)
- Xiangying Shi
- College of Environmental Sciences and Engineering, Peking University, Beijing, ChinaCollege of Environmental Sciences and Engineering, Peking UniversityBeijingChina,Shan Shui Conservation Center, Beijing, ChinaShan Shui Conservation CenterBeijingChina
| | - Ge Sun
- Ecology and Nature Conservation Institute,Chinese Academy of Forestry, Beijing, ChinaEcology and Nature Conservation Institute,Chinese Academy of ForestryBeijingChina
| | - Xinyu Yang
- Beijing Forestry Carbon Administration, Beijing, ChinaBeijing Forestry Carbon AdministrationBeijingChina
| | - Junhong Gao
- Beijing Forestry Carbon Administration, Beijing, ChinaBeijing Forestry Carbon AdministrationBeijingChina
| | - Lingdi Tan
- Shan Shui Conservation Center, Beijing, ChinaShan Shui Conservation CenterBeijingChina
| | - Yuexin Song
- Shan Shui Conservation Center, Beijing, ChinaShan Shui Conservation CenterBeijingChina
| | - Yiping Hu
- Shan Shui Conservation Center, Beijing, ChinaShan Shui Conservation CenterBeijingChina
| | - Zunxiu Zhou
- Jingxi Forest Farm, Beijing, ChinaJingxi Forest FarmBeijingChina
| | - Huibin Zhao
- Jingxi Forest Farm, Beijing, ChinaJingxi Forest FarmBeijingChina
| | - Zhihai Hu
- Jingxi Forest Farm, Beijing, ChinaJingxi Forest FarmBeijingChina
| | - Shunwan Zhu
- Jingxi Forest Farm, Beijing, ChinaJingxi Forest FarmBeijingChina
| | - Yufan Cao
- Jingxi Forest Farm, Beijing, ChinaJingxi Forest FarmBeijingChina
| | - Rui Liao
- Sichuan Academy of Forestry, Chengdu, ChinaSichuan Academy of ForestryChengduChina
| | - Wei Chen
- Center for Nature and Society, College of Life Sciences, Peking University, Beijing, ChinaCenter for Nature and Society, College of Life Sciences, Peking UniversityBeijingChina
| | - Zhehao Wu
- Mountain Cats Culture Communication Co., Ltd, Beijing, ChinaMountain Cats Culture Communication Co., LtdBeijingChina
| | - Xiangyu Guan
- Guanxiangyu Ecological Technology Co. Ltd, Beijing, ChinaGuanxiangyu Ecological Technology Co. LtdBeijingChina
| | - Xiaotong Ren
- Institute of Ecology, College of Urban and Environmental Sciences, Peking University, Beijing, ChinaInstitute of Ecology, College of Urban and Environmental Sciences, Peking UniversityBeijingChina
| | - Shen Zhang
- Shan Shui Conservation Center, Beijing, ChinaShan Shui Conservation CenterBeijingChina
| |
Collapse
|
9
|
Roos RE, Birkemoe T, Bokhorst S, Wardle DA, Asplund J. The importance of foundation species identity: a field experiment with lichens and their associated micro-arthropod communities. Basic Appl Ecol 2022. [DOI: 10.1016/j.baae.2022.04.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
|
10
|
Agriculture and climate change are reshaping insect biodiversity worldwide. Nature 2022; 605:97-102. [PMID: 35444282 DOI: 10.1038/s41586-022-04644-x] [Citation(s) in RCA: 121] [Impact Index Per Article: 40.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2021] [Accepted: 03/15/2022] [Indexed: 11/08/2022]
Abstract
Several previous studies have investigated changes in insect biodiversity, with some highlighting declines and others showing turnover in species composition without net declines1-5. Although research has shown that biodiversity changes are driven primarily by land-use change and increasingly by climate change6,7, the potential for interaction between these drivers and insect biodiversity on the global scale remains unclear. Here we show that the interaction between indices of historical climate warming and intensive agricultural land use is associated with reductions of almost 50% in the abundance and 27% in the number of species within insect assemblages relative to those in less-disturbed habitats with lower rates of historical climate warming. These patterns are particularly evident in the tropical realm, whereas some positive responses of biodiversity to climate change occur in non-tropical regions in natural habitats. A high availability of nearby natural habitat often mitigates reductions in insect abundance and richness associated with agricultural land use and substantial climate warming but only in low-intensity agricultural systems. In such systems, in which high levels (75% cover) of natural habitat are available, abundance and richness were reduced by 7% and 5%, respectively, compared with reductions of 63% and 61% in places where less natural habitat is present (25% cover). Our results show that insect biodiversity will probably benefit from mitigating climate change, preserving natural habitat within landscapes and reducing the intensity of agriculture.
Collapse
|
11
|
Li W, Wang W, Chen J, Zhang Z. Assessing effects of the Returning Farmland to Forest Program on vegetation cover changes at multiple spatial scales: The case of northwest Yunnan, China. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2022; 304:114303. [PMID: 34933269 DOI: 10.1016/j.jenvman.2021.114303] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2020] [Revised: 12/01/2021] [Accepted: 12/12/2021] [Indexed: 06/14/2023]
Abstract
Chinese state authorities have successfully accelerated afforestation over large areas through the Returning Farmland to Forest Program (RFFP). However, variation in the implementation of the RFFP among villages may lead to uncertainty in forest transitions at multiple spatial levels. Here, we combined remote sensing analysis with field quadrats and questionnaire surveys to assess the RFFP's effectiveness in increasing vegetation cover at the Lancang watershed, township and natural village levels in Weixi County, a biodiversity hotspot in northwest Yunnan. From 2000 to 2010 and 2010 to 2014, forest coverage increased, and areas of shrubland and agricultural land decreased at both watershed and township levels, which reflected a positive impact of the RFFP. However, the new forests established under the RFFP in the study area mostly consisted of monocultures of walnut and pine trees, a situation that could threaten local biodiversity. Changes in forest and shrub coverage varied among natural villages-gain and loss trends both occurred, indicating a limited impact of the RFFP. Nonparticipating RFFP households also abandoned cropland, and agricultural land area in these villages declined over the study period. At the watershed and township levels, RFFP greatly promoted increases in forest coverage. Elevation, the behavior of village officials and household livelihoods were often the most relevant factors at the natural village level. Interactions among these multiple drivers resulted in cross-scale heterogeneity of vegetation cover changes in northwest Yunnan. Future forest policies need to be tailored to specific regions and be based on assessments of local natural and socioeconomic conditions.
Collapse
Affiliation(s)
- Wenqing Li
- School of Ecology and Environmental Sciences and Yunnan, Key Laboratory for Plateau Mountain Ecology and Restoration of Degraded Environments, Yunnan University, Kunming, 650091, China; CAS Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, 650201, China
| | - Wenli Wang
- School of Ecology and Environmental Sciences and Yunnan, Key Laboratory for Plateau Mountain Ecology and Restoration of Degraded Environments, Yunnan University, Kunming, 650091, China
| | - Jiahui Chen
- CAS Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, 650201, China
| | - Zhiming Zhang
- School of Ecology and Environmental Sciences and Yunnan, Key Laboratory for Plateau Mountain Ecology and Restoration of Degraded Environments, Yunnan University, Kunming, 650091, China.
| |
Collapse
|
12
|
O'Connell DP, Fusi M, Djamaluddin R, Rajagukguk BB, Bachmid F, Kitson JJN, Dunnett Z, Trianto A, Tjoa AB, Diele K, Evans DM. Assessing mangrove restoration practices using species‐interaction networks. Restor Ecol 2021. [DOI: 10.1111/rec.13546] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Affiliation(s)
- Darren P. O'Connell
- School of Biology and Environmental Science University College Dublin Dublin D04 N2E5 Ireland
- School of Natural and Environmental Sciences Newcastle University Newcastle Upon Tyne NE1 7RU UK
| | - Marco Fusi
- School of Applied Sciences Edinburgh Napier University Edinburg EH11 4BN U.K
| | - Rignolda Djamaluddin
- Faculty of Fisheries and Marine Science Sam Ratulangi University Manado North Sulawesi 95115 Indonesia
| | - Bulfrit B. Rajagukguk
- Faculty of Fisheries and Marine Science Sam Ratulangi University Manado North Sulawesi 95115 Indonesia
| | - Fihri Bachmid
- Faculty of Fisheries and Marine Science Sam Ratulangi University Manado North Sulawesi 95115 Indonesia
| | - James J. N. Kitson
- School of Natural and Environmental Sciences Newcastle University Newcastle Upon Tyne NE1 7RU UK
| | - Zoe Dunnett
- School of Natural and Environmental Sciences Newcastle University Newcastle Upon Tyne NE1 7RU UK
| | - Agus Trianto
- Faculty of Fisheries and Marine Sciences Diponegoro University Semarang Central Java 50275 Indonesia
| | - Aiyen B. Tjoa
- Faculty of Agriculture Tadulako University Palu Central Sulawesi 94148 Indonesia
| | - Karen Diele
- School of Applied Sciences Edinburgh Napier University Edinburg EH11 4BN U.K
| | - Darren M. Evans
- School of Natural and Environmental Sciences Newcastle University Newcastle Upon Tyne NE1 7RU UK
| |
Collapse
|
13
|
Schroeder A, Pallavicini A, Edomi P, Pansera M, Camatti E. Suitability of a dual COI marker for marine zooplankton DNA metabarcoding. MARINE ENVIRONMENTAL RESEARCH 2021; 170:105444. [PMID: 34399186 DOI: 10.1016/j.marenvres.2021.105444] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2021] [Revised: 08/02/2021] [Accepted: 08/03/2021] [Indexed: 06/13/2023]
Abstract
As DNA metabarcoding has become an emerging tool for surveying biodiversity, including its application in legally binding assessments, reliable and efficient barcodes are requested, especially for the highly diverse group of zooplankton. This study focuses on comparing the efficiency of two mitochondrial COI barcodes based on the internal primers mlCOIintF and mlCOIintR utilizing mesozooplankton samples collected in a Mediterranean lagoon. Our results indicate that after a slight adjustment, the mlCOIintR primer performs in combination with jdgLCO1490 (herein) very comparably to the much more widely used primer system mlCOIintF/jgHCO2198+dgHCO2198, in terms of level of taxonomic resolution, species detection and their relative abundance in terms of numbers of reads. As for some groups, like Ctenophora, this barcode is not suitable; a combination of them may be the best option to rely on the Folmer region in its entirety without the risk of losing information for a limited primer match.
Collapse
Affiliation(s)
- Anna Schroeder
- National Research Council, Institute of Marine Science (CNR ISMAR) Venice, Arsenale Tesa 104, Castello 2737/F, 30122, Venice, Italy; University of Trieste, Department of Life Sciences, Via Licio Giorgieri 5, 34127, Trieste, Italy.
| | - Alberto Pallavicini
- University of Trieste, Department of Life Sciences, Via Licio Giorgieri 5, 34127, Trieste, Italy; Stazione Zoologica Anton Dohrn, Villa Comunale, 80121, Naples, Italy.
| | - Paolo Edomi
- University of Trieste, Department of Life Sciences, Via Licio Giorgieri 5, 34127, Trieste, Italy.
| | - Marco Pansera
- National Research Council, Institute of Marine Science (CNR ISMAR) Venice, Arsenale Tesa 104, Castello 2737/F, 30122, Venice, Italy; Stazione Zoologica Anton Dohrn, Villa Comunale, 80121, Naples, Italy.
| | - Elisa Camatti
- National Research Council, Institute of Marine Science (CNR ISMAR) Venice, Arsenale Tesa 104, Castello 2737/F, 30122, Venice, Italy.
| |
Collapse
|
14
|
Yang C, Bohmann K, Wang X, Cai W, Wales N, Ding Z, Gopalakrishnan S, Yu DW. Biodiversity Soup II: A bulk‐sample metabarcoding pipeline emphasizing error reduction. Methods Ecol Evol 2021. [DOI: 10.1111/2041-210x.13602] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Affiliation(s)
- Chunyan Yang
- State Key Laboratory of Genetic Resources and Evolution Kunming Institute of ZoologyChinese Academy of Sciences Kunming China
| | - Kristine Bohmann
- Section for Evolutionary Genomics Globe Institute Faculty of Health and Medical Sciences University of Copenhagen Copenhagen Denmark
| | - Xiaoyang Wang
- State Key Laboratory of Genetic Resources and Evolution Kunming Institute of ZoologyChinese Academy of Sciences Kunming China
| | - Wang Cai
- State Key Laboratory of Genetic Resources and Evolution Kunming Institute of ZoologyChinese Academy of Sciences Kunming China
| | - Nathan Wales
- Section for Evolutionary Genomics Globe Institute Faculty of Health and Medical Sciences University of Copenhagen Copenhagen Denmark
- Department of Archaeology University of York York UK
| | - Zhaoli Ding
- Biodiversity Genomics Center Kunming Institute of Zoology Chinese Academy of Sciences Kunming China
| | - Shyam Gopalakrishnan
- Section for Evolutionary Genomics Globe Institute Faculty of Health and Medical Sciences University of Copenhagen Copenhagen Denmark
| | - Douglas W. Yu
- State Key Laboratory of Genetic Resources and Evolution Kunming Institute of ZoologyChinese Academy of Sciences Kunming China
- School of Biological Sciences University of East AngliaNorwich Research Park Norwich UK
- Center for Excellence in Animal Evolution and Genetics Chinese Academy of Sciences Kunming China
| |
Collapse
|
15
|
Zhou X, Leite MFA, Zhang Z, Tian L, Chang J, Ma L, Li X, van Veen JA, Tian C, Kuramae EE. Facilitation in the soil microbiome does not necessarily lead to niche expansion. ENVIRONMENTAL MICROBIOME 2021; 16:4. [PMID: 33902741 PMCID: PMC8067652 DOI: 10.1186/s40793-021-00373-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2020] [Accepted: 01/21/2021] [Indexed: 05/24/2023]
Abstract
BACKGROUND The soil microbiome drives soil ecosystem function, and soil microbial functionality is directly linked to interactions between microbes and the soil environment. However, the context-dependent interactions in the soil microbiome remain largely unknown. RESULTS Using latent variable models (LVMs), we disentangle the biotic and abiotic interactions of soil bacteria, fungi and environmental factors using the Qinghai-Tibetan Plateau soil ecosystem as a model. Our results show that soil bacteria and fungi not only interact with each other but also shift from competition to facilitation or vice versa depending on environmental variation; that is, the nature of their interactions is context-dependent. CONCLUSIONS Overall, elevation is the environmental gradient that most promotes facilitative interactions among microbes but is not a major driver of soil microbial community composition, as evidenced by variance partitioning. The larger the tolerance of a microbe to a specific environmental gradient, the lesser likely it is to interact with other soil microbes, which suggests that facilitation does not necessarily lead to niche expansion.
Collapse
Affiliation(s)
- Xue Zhou
- College of Resources and Environment, Jilin Agricultural University, Changchun, China
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, China
| | - Márcio F A Leite
- Department of Microbial Ecology, Netherlands Institute of Ecology NIOO-KNAW, Wageningen, the Netherlands
| | - Zhenqing Zhang
- Key Laboratory of Wetland Ecology and Environment, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, China
| | - Lei Tian
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, China
| | - Jingjing Chang
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, China
- University of the Chinese Academy of Sciences, Beijing, China
| | - Lina Ma
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, China
- University of the Chinese Academy of Sciences, Beijing, China
| | - Xiujun Li
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, China
| | - Johannes A van Veen
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, China
- Department of Microbial Ecology, Netherlands Institute of Ecology NIOO-KNAW, Wageningen, the Netherlands
| | - Chunjie Tian
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, China.
| | - Eiko E Kuramae
- Department of Microbial Ecology, Netherlands Institute of Ecology NIOO-KNAW, Wageningen, the Netherlands.
- Ecology and biodiversity, Institute of Environmental Biology, Utrecht University, Utrecht, The Netherlands.
| |
Collapse
|
16
|
Lynggaard C, Yu DW, Oliveira G, Caldeira CF, Ramos SJ, Ellegaard MR, Gilbert MTP, Gastauer M, Bohmann K. DNA-Based Arthropod Diversity Assessment in Amazonian Iron Mine Lands Show Ecological Succession Towards Undisturbed Reference Sites. Front Ecol Evol 2020. [DOI: 10.3389/fevo.2020.590976] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023] Open
Abstract
Human activities change natural landscapes, and in doing so endanger biodiversity and associated ecosystem services. To reduce the net impacts of these activities, such as mining, disturbed areas are rehabilitated and restored. During this process, monitoring is important to ensure that desired trajectories are maintained. In the Carajás region of the Brazilian Amazon, exploration for iron ores has transformed the original ecosystem; natural forest and a savanna formation with lateritic iron duricrust outcrops named canga. Here, native vegetation is logged and topsoil removed and deposited in waste piles along with mine waste. During rehabilitation, these waste piles are hydroseeded with non-native plant species to achieve rapid revegetation. Further, seeds of native canga and forest plant species are planted to point ecological succession towards natural ecosystems. In this study, we investigate diversity and composition of the arthropod community along a post-mining rehabilitation and restoration gradient, taking seasonality and primer bias into account. We use DNA metabarcoding of bulk arthropod samples collected in both the dry and rainy seasons from waste-pile benches at various stages of revegetation: non-revegetated exposed soils, initial stage with one-to-three-year-old stands, intermediate stage with four-to-five-year-old stands, and advanced stage with six-to-seven-year-old stands. We use samples from undisturbed cangas and forests as reference sites. In addition, we vegetation diversity and structure were measured to investigate relations between arthropod community and vegetation structure. Our results show that, over time, the arthropod community composition of the waste piles becomes more similar to the reference forests, but not to the reference cangas. Nevertheless, even the communities in the advanced-stage waste piles are different from the reference forests, and full restoration in these highly diverse ecosystems is not achieved, even after 6 to 7 years. Finally, our results show seasonal variation in arthropod communities and primer bias.
Collapse
|
17
|
Liu M, Baker SC, Burridge CP, Jordan GJ, Clarke LJ. DNA
metabarcoding captures subtle differences in forest beetle communities following disturbance. Restor Ecol 2020. [DOI: 10.1111/rec.13236] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
- Mingxin Liu
- School of Natural Sciences University of Tasmania Private Bag 55, Hobart Tasmania 7001 Australia
- ARC Centre for Forest Value University of Tasmania Hobart Tasmania 7001 Australia
| | - Susan C. Baker
- School of Natural Sciences University of Tasmania Private Bag 55, Hobart Tasmania 7001 Australia
- ARC Centre for Forest Value University of Tasmania Hobart Tasmania 7001 Australia
| | - Christopher P. Burridge
- School of Natural Sciences University of Tasmania Private Bag 55, Hobart Tasmania 7001 Australia
| | - Gregory J. Jordan
- School of Natural Sciences University of Tasmania Private Bag 55, Hobart Tasmania 7001 Australia
| | - Laurence J. Clarke
- Antarctic Climate and Ecosystems Cooperative Research Centre University of Tasmania Hobart Tasmania 7001 Australia
- Institute for Marine and Antarctic Studies University of Tasmania Hobart Tasmania 7001 Australia
| |
Collapse
|
18
|
Pereira P, Barceló D, Panagos P. Soil and water threats in a changing environment. ENVIRONMENTAL RESEARCH 2020; 186:109501. [PMID: 32325293 DOI: 10.1016/j.envres.2020.109501] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2020] [Accepted: 04/07/2020] [Indexed: 06/11/2023]
Affiliation(s)
- Paulo Pereira
- Environmental Management Laboratory, Mykolas Romeris University, Vilnius, Lithuania.
| | - Damià Barceló
- Water and Soil Quality Research Group, Institute of Environmental Assessment and Water Research (IDAEA), Barcelona, Spain; Catalan Institution for Research and Advanced Studies (ICRA), Barcelona, Spain
| | - Panos Panagos
- European Commission, Joint Research Centre (JRC), I-21027, Ispra (VA), Italy.
| |
Collapse
|
19
|
Modeling Height–Diameter Relationships for Mixed-Species Plantations of Fraxinus mandshurica Rupr. and Larix olgensis Henry in Northeastern China. FORESTS 2020. [DOI: 10.3390/f11060610] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
The mixture of tree species has gradually become the focus of forest research, especially native species mixing. Mixed-species plantations of Manchurian ash (Fraxinus mandshurica Rupr.) and Changbai larch (Larix olgensis Henry) have successfully been cultivated in Northeast China. Height–diameter (H–D) models were found to be effective in designing the silvicultural planning for mixed-species plantations. Thus, this study aimed to develop a new system of H–D models for juvenile ash and larch mixed-species plantations, based on competition information and tree and stand attributes. The leave-one-out cross-validation was utilized for model validation. The result showed that the H–D relationship was affected not only by the tree attributes (i.e., tree size and competition information) but also by stand characteristics, such as site quality and species proportion of basal area. The best model explained more than 80% and 85% variation of the tree height of ash and larch, respectively. Moreover, model validation also confirmed the high accuracy of the newly developed model’s predictions. We also found that, in terms of total tree height, ash in middle rows were higher than those in side rows, while larch in the middle rows were higher in the early growth period but then became lower than those in the side rows, as the diameter increased. The newly established H–D models would be useful for forestry inventory practice and have the potential to aid decisions in mixed-species plantations of ash and larch.
Collapse
|
20
|
Yang CQ, Lv Q, Zhang AB. Sixteen Years of DNA Barcoding in China: What Has Been Done? What Can Be Done? Front Ecol Evol 2020. [DOI: 10.3389/fevo.2020.00057] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022] Open
|
21
|
Hughes AC, Lechner AM, Chitov A, Horstmann A, Hinsley A, Tritto A, Chariton A, Li BV, Ganapin D, Simonov E, Morton K, Toktomushev K, Foggin M, Tan-Mullins M, Orr MC, Griffiths R, Nash R, Perkin S, Glémet R, Kim M, Yu DW. Horizon Scan of the Belt and Road Initiative. Trends Ecol Evol 2020; 35:583-593. [PMID: 32521242 DOI: 10.1016/j.tree.2020.02.005] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2019] [Revised: 01/29/2020] [Accepted: 02/11/2020] [Indexed: 10/24/2022]
Abstract
The Belt and Road Initiative (BRI) represents the largest infrastructure and development project in human history, and presents risks and opportunities for ecosystems, economies, and communities. Some risks (habitat fragmentation, roadkill) are obvious, however, many of the BRI's largest challenges for development and conservation are not obvious and require extensive consideration to identify. In this first BRI Horizon Scan, we identify 11 frontier issues that may have large environmental and social impacts but are not yet recognised. More generally, the BRI will increase China's participation in international environmental governance. Thus, new cooperative modes of governance are needed to balance geopolitical, societal, and environmental interests. Upgrading and standardising global environmental standards is essential to safeguard ecological systems and human societies.
Collapse
Affiliation(s)
- Alice C Hughes
- Center for Integrative Conservation, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, Yunnan 666303, China; Center of Conservation Biology, Core Botanical Gardens, Chinese Academy of Sciences, Mengla, Yunnan 666303, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Alex M Lechner
- School of Environmental and Geographical Sciences, University of Nottingham Malaysia, 43500 Semenyih, Malaysia
| | - Alexander Chitov
- Faculty of Law, University of Chiang Mai, Chiang Mai 50200, Thailand
| | | | - Amy Hinsley
- WildCRU, Department of Zoology, University of Oxford, OX1 3SZ, UK
| | - Angela Tritto
- Institute of Emerging Market Studies, The Hong Kong University of Science and Technology, Hong Kong, HK-SAR, China
| | - Anthony Chariton
- Department of Biological Sciences, Macquarie University, NSW, Australia
| | - Binbin V Li
- Environmental Research Center, Duke Kunshan University, Kunshan, Jiangsu, China; Nicholas School of the Environment, Duke University, Durham, North, Carolina, NC 27708, USA
| | - Delfin Ganapin
- World Wide Fund for Nature (WWF) International, 1196 Gland, Switzerland
| | - Eugene Simonov
- Rivers without Boundaries International Coalition, Dalian 116650, China; Daursky Biosphere Reserve, Nizhny Tsasuchei, Zabaikalsky Province, Russia
| | - Katherine Morton
- School of East Asian Studies, University of Sheffield, Sheffield, S10 2TD, UK; Schwarzman College, Tsinghua University, Beijing, China
| | - Kemel Toktomushev
- Mountain Societies Research Institute, University of Central Asia, Bishkek 720002, Kyrgyz Republic
| | - Marc Foggin
- Institute of Asian Research, School of Public Policy and Global Affairs, University of British Columbia, Vancouver, BC, Canada
| | - May Tan-Mullins
- School of International Studies, Institute of Asia and Pacific Studies, University of Nottingham, Ningbo, China
| | - Michael C Orr
- Key Laboratory of Zoological Systematics, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
| | - Richard Griffiths
- International Institute for Asian Studies, 2311, GJ, Leiden, The Netherlands
| | - Richard Nash
- Rivers without Boundaries International Coalition, Dalian 116650, China
| | - Scott Perkin
- IUCN Asia Regional Office, Watthana, Bangkok 10110, Thailand
| | - Raphaël Glémet
- IUCN Asia Regional Office, Watthana, Bangkok 10110, Thailand
| | - Minsun Kim
- IUCN Asia Regional Office, Watthana, Bangkok 10110, Thailand
| | - Douglas W Yu
- State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan 650223, China; Center for Excellence in Animal Evolution and Genetics, Chinese Academy of Sciences, Kunming, Yunnan 650223, China; School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, UK
| |
Collapse
|