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Ashraf N, Anas A, Sukumaran V, Gopinath G, Idrees Babu KK, Dinesh Kumar PK. Recent advancements in coral health, microbiome interactions and climate change. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 878:163085. [PMID: 36996987 DOI: 10.1016/j.scitotenv.2023.163085] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/12/2022] [Revised: 03/21/2023] [Accepted: 03/22/2023] [Indexed: 05/13/2023]
Abstract
Corals are the visible indicators of the disasters induced by global climate change and anthropogenic activities and have become a highly vulnerable ecosystem on the verge of extinction. Multiple stressors could act individually or synergistically which results in small to large scale tissue degradation, reduced coral covers, and makes the corals vulnerable to various diseases. The coralline diseases are like the Chicken pox in humans because they spread hastily throughout the coral ecosystem and can devastate the coral cover formed over centuries in an abbreviated time. The extinction of the entire reef ecosystem will alter the ocean and earth's amalgam of biogeochemical cycles causing a threat to the entire planet. The current manuscript provides an overview of the recent advancement in coral health, microbiome interactions and climate change. Culture dependent and independent approaches in studying the microbiome of corals, the diseases caused by microorganisms, and the reservoirs of coral pathogens are also discussed. Finally, we discuss the possibilities of protecting the coral reefs from diseases through microbiome transplantation and the capabilities of remote sensing in monitoring their health status.
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Affiliation(s)
- Nizam Ashraf
- CSIR - National Institute of Oceanography, Regional Centre, Kochi 682018, India
| | - Abdulaziz Anas
- CSIR - National Institute of Oceanography, Regional Centre, Kochi 682018, India.
| | - Vrinda Sukumaran
- CSIR - National Institute of Oceanography, Regional Centre, Kochi 682018, India
| | - Girish Gopinath
- Department of Climate Variability and Aquatic Ecosystems, Kerala University of Fisheries and Ocean Studies (KUFOS), Puduvypu Campus, Kochi 682 508, India
| | - K K Idrees Babu
- Department of Science and Technology, Kavaratti, Lakshadweep 682555, India
| | - P K Dinesh Kumar
- CSIR - National Institute of Oceanography, Regional Centre, Kochi 682018, India
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2
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Young BD, Rosales SM, Enochs IC, Kolodziej G, Formel N, Moura A, D'Alonso GL, Traylor-Knowles N. Different disease inoculations cause common responses of the host immune system and prokaryotic component of the microbiome in Acropora palmata. PLoS One 2023; 18:e0286293. [PMID: 37228141 DOI: 10.1371/journal.pone.0286293] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2023] [Accepted: 05/12/2023] [Indexed: 05/27/2023] Open
Abstract
Reef-building corals contain a complex consortium of organisms, a holobiont, which responds dynamically to disease, making pathogen identification difficult. While coral transcriptomics and microbiome communities have previously been characterized, similarities and differences in their responses to different pathogenic sources has not yet been assessed. In this study, we inoculated four genets of the Caribbean branching coral Acropora palmata with a known coral pathogen (Serratia marcescens) and white band disease. We then characterized the coral's transcriptomic and prokaryotic microbiomes' (prokaryiome) responses to the disease inoculations, as well as how these responses were affected by a short-term heat stress prior to disease inoculation. We found strong commonality in both the transcriptomic and prokaryiomes responses, regardless of disease inoculation. Differences, however, were observed between inoculated corals that either remained healthy or developed active disease signs. Transcriptomic co-expression analysis identified that corals inoculated with disease increased gene expression of immune, wound healing, and fatty acid metabolic processes. Co-abundance analysis of the prokaryiome identified sets of both healthy-and-disease-state bacteria, while co-expression analysis of the prokaryiomes' inferred metagenomic function revealed infected corals' prokaryiomes shifted from free-living to biofilm states, as well as increasing metabolic processes. The short-term heat stress did not increase disease susceptibility for any of the four genets with any of the disease inoculations, and there was only a weak effect captured in the coral hosts' transcriptomic and prokaryiomes response. Genet identity, however, was a major driver of the transcriptomic variance, primarily due to differences in baseline immune gene expression. Despite genotypic differences in baseline gene expression, we have identified a common response for components of the coral holobiont to different disease inoculations. This work has identified genes and prokaryiome members that can be focused on for future coral disease work, specifically, putative disease diagnostic tools.
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Affiliation(s)
- Benjamin D Young
- Department of Marine Biology and Ecology, Rosenstiel School of Marine, Atmospheric and Earth Science, University of Miami, Miami, Florida, United States of America
- Cooperative Institute of Marine and Atmospheric Science, Rosenstiel School of Marine Atmospheric, and Earth Science, University of Miami, Miami, Florida, United States of America
- Atlantic Oceanographic and Meteorological Laboratory, National Oceanic and Atmospheric Administration, Miami, Florida, United States of America
| | - Stephanie M Rosales
- Cooperative Institute of Marine and Atmospheric Science, Rosenstiel School of Marine Atmospheric, and Earth Science, University of Miami, Miami, Florida, United States of America
- Atlantic Oceanographic and Meteorological Laboratory, National Oceanic and Atmospheric Administration, Miami, Florida, United States of America
| | - Ian C Enochs
- Atlantic Oceanographic and Meteorological Laboratory, National Oceanic and Atmospheric Administration, Miami, Florida, United States of America
| | - Graham Kolodziej
- Cooperative Institute of Marine and Atmospheric Science, Rosenstiel School of Marine Atmospheric, and Earth Science, University of Miami, Miami, Florida, United States of America
- Atlantic Oceanographic and Meteorological Laboratory, National Oceanic and Atmospheric Administration, Miami, Florida, United States of America
| | - Nathan Formel
- Biology Department, Woods Hole Oceanographic Institution, Woods Hole, Massachusetts, United States of America
| | - Amelia Moura
- Coral Restoration Foundation, Tavernier, Florida, United States of America
| | | | - Nikki Traylor-Knowles
- Department of Marine Biology and Ecology, Rosenstiel School of Marine, Atmospheric and Earth Science, University of Miami, Miami, Florida, United States of America
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Aguiar DK, Wiegner TN, Colbert SL, Burns J, Abaya L, Beets J, Couch C, Stewart J, Panelo J, Remple K, Nelson C. Detection and impact of sewage pollution on South Kohala's coral reefs, Hawai'i. MARINE POLLUTION BULLETIN 2023; 188:114662. [PMID: 36739712 DOI: 10.1016/j.marpolbul.2023.114662] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/26/2022] [Revised: 01/18/2023] [Accepted: 01/23/2023] [Indexed: 06/18/2023]
Abstract
Sewage pollution from on-site sewage disposal systems and injection wells is impacting coral reefs worldwide. Our study documented the presence and impact of sewage on South Kohala's coral reefs, on Hawai'i Island, through benthic water quality and macroalgal sampling (fecal indicator bacteria, nutrients, δ15N macroalgal tissue), NO3- stable isotope mixing models, water motion measurements, and coral reef surveys. Sewage pollution was moderate on the offshore reef from benthic seeps, and water motion mixed and diluted it across the benthos. These conditions likely contribute to the dominance of turf algae cover, and the severity and prevalence of growth anomalies and algal overgrowth on corals. Use of multiple indicators and studying water motion was necessary to assess sewage pollution and identify environmental drivers associated with impaired coral health conditions. Methods used in this study can be utilized by natural resource managers to identify and reduce anthropogenic stressors to coral reefs.
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Affiliation(s)
- Devon K Aguiar
- Tropical Conservation Biology and Environmental Science Graduate Program, University of Hawai'i at Hilo, 200 W. Kawili St., Hilo, HI 96720, USA.
| | - Tracy N Wiegner
- Marine Science Department, University of Hawai'i at Hilo, 200 W. Kawili St., Hilo, HI 96720, USA.
| | - Steven L Colbert
- Marine Science Department, University of Hawai'i at Hilo, 200 W. Kawili St., Hilo, HI 96720, USA.
| | - John Burns
- Marine Science Department, University of Hawai'i at Hilo, 200 W. Kawili St., Hilo, HI 96720, USA.
| | - Leilani Abaya
- Marine Science Department, University of Hawai'i at Hilo, 200 W. Kawili St., Hilo, HI 96720, USA.
| | - James Beets
- Marine Science Department, University of Hawai'i at Hilo, 200 W. Kawili St., Hilo, HI 96720, USA.
| | - Courtney Couch
- NOAA/Pacific Islands Fisheries Science Center, Ecosystem Sciences Division, NOAA Inouye Regional Center, 1845 Wasp Blvd, Bldg. # 176, Honolulu, HI 96818, USA.
| | - Julia Stewart
- Marine Science Department, University of Hawai'i at Hilo, 200 W. Kawili St., Hilo, HI 96720, USA.
| | - Jazmine Panelo
- Tropical Conservation Biology and Environmental Science Graduate Program, University of Hawai'i at Hilo, 200 W. Kawili St., Hilo, HI 96720, USA.
| | - Kristina Remple
- Daniel K. Inouye Center for Microbial Oceanography Research and Education, Department of Oceanography and Sea Grant College Program, University of Hawai'i at Mānoa, 1950 East West Road, Honolulu, HI 96822, USA.
| | - Craig Nelson
- Daniel K. Inouye Center for Microbial Oceanography Research and Education, Department of Oceanography and Sea Grant College Program, University of Hawai'i at Mānoa, 1950 East West Road, Honolulu, HI 96822, USA.
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Sridharan R, Krishnaswamy VG, Senthil Kumar P, Muralidharan M, Aishwarya S, Sivamurugan V, Rethnaraj C, Nisha JC, Satyanarayana C, Rangasamy G. Isolation of moderately halotolerant bacterial strains, associated with coral Porites lutea from Gulf of Kachchh: Antibacterial activity and PHB production. ENVIRONMENTAL RESEARCH 2023; 218:115006. [PMID: 36493810 DOI: 10.1016/j.envres.2022.115006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/23/2022] [Revised: 11/18/2022] [Accepted: 12/05/2022] [Indexed: 06/17/2023]
Abstract
The marine ecosystem contains a solution for food, shelter, pharmaceutical problems and has a key role in the economy of the country as tourism. The Gulf of Kachchh, known for its high tides and the coral reefs are less explored for its antibiotic activity due to the coral bleaching and diseases. The bacterial strains in the coral Porites lutea are determined to possess antibiotic activity against bacterial strains such as E.coli, P. aeruginosa, S. aureus and S. faecalis. Among thirty bacterial strains isolated from the tissue, skeleton and mucus, two bacterial strains resulted in the better antagonistic activity. The antibiotic compound extracted from both the bacteria elucidated to be 4-[(2E)-4-hydroxypent-2-en-1-yl]-5,6-dihydro-2H-pyran-2-one. Further, through ADMET prediction it was inferred that it is an effective drug lead as it reports less toxicity and better drug-likeliness. The study also includes the effect of Poly Hydroxy Butarate (PHB) production by the isolated bacterial strain.
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Affiliation(s)
- Rajalakshmi Sridharan
- Department of Biotechnology, Stella Maris College (Autonomous), Affiliated to University of Madras, Chennai 600 086, India
| | - Veena Gayathri Krishnaswamy
- Department of Biotechnology, Stella Maris College (Autonomous), Affiliated to University of Madras, Chennai 600 086, India.
| | - P Senthil Kumar
- Department of Chemical Engineering, Sri Sivasubramaniya Nadar College of Engineering, Kalavakkam 603110, Tamil Nadu, India; Centre of Excellence in Water Research (CEWAR), Sri Sivasubramaniya Nadar College of Engineering, Kalavakkam 603110, Tamil Nadu, India; Department of Biotechnology Engineering and Food Technology, Chandigarh University, Mohali 140413, India.
| | - Manasa Muralidharan
- Department of Biotechnology, Stella Maris College (Autonomous), Affiliated to University of Madras, Chennai 600 086, India
| | - S Aishwarya
- Department of Bioinformatics, Stella Maris College (Autonomous), Affiliated to University of Madras, Chennai 600 086, India
| | - V Sivamurugan
- Department of Chemistry, Pachaiyappa's College, Chennai 600 030, India
| | - Chandran Rethnaraj
- Marine Biology Regional Station - Zoological Survey of India, #130 Santhome High Road, Chennai 600028, India
| | - J C Nisha
- Zoological Survey of India - Project Field Station (SAC-ZSI Project), Forest Colony, Jamnagar 361001, India
| | - Chowdula Satyanarayana
- Marine Biology Regional Station - Zoological Survey of India, #130 Santhome High Road, Chennai 600028, India
| | - Gayathri Rangasamy
- School of Engineering, Lebanese American University, Byblos, Lebanon; Department of Sustainable Engineering, Institute of Biotechnology, Saveetha School of Engineering, SIMATS, Chennai 602105, India.
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Glidden CK, Field LC, Bachhuber S, Hennessey SM, Cates R, Cohen L, Crockett E, Degnin M, Feezell MK, Fulton‐Bennett HK, Pires D, Poirson BN, Randell ZH, White E, Gravem SA. Strategies for managing marine disease. ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2022; 32:e2643. [PMID: 35470930 PMCID: PMC9786832 DOI: 10.1002/eap.2643] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/25/2021] [Accepted: 02/24/2022] [Indexed: 06/14/2023]
Abstract
The incidence of emerging infectious diseases (EIDs) has increased in wildlife populations in recent years and is expected to continue to increase with global environmental change. Marine diseases are relatively understudied compared with terrestrial diseases but warrant parallel attention as they can disrupt ecosystems, cause economic loss, and threaten human livelihoods. Although there are many existing tools to combat the direct and indirect consequences of EIDs, these management strategies are often insufficient or ineffective in marine habitats compared with their terrestrial counterparts, often due to fundamental differences between marine and terrestrial systems. Here, we first illustrate how the marine environment and marine organism life histories present challenges and opportunities for wildlife disease management. We then assess the application of common disease management strategies to marine versus terrestrial systems to identify those that may be most effective for marine disease outbreak prevention, response, and recovery. Finally, we recommend multiple actions that will enable more successful management of marine wildlife disease emergencies in the future. These include prioritizing marine disease research and understanding its links to climate change, improving marine ecosystem health, forming better monitoring and response networks, developing marine veterinary medicine programs, and enacting policy that addresses marine and other wildlife diseases. Overall, we encourage a more proactive rather than reactive approach to marine wildlife disease management and emphasize that multidisciplinary collaborations are crucial to managing marine wildlife health.
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Affiliation(s)
- Caroline K. Glidden
- Department of Integrative BiologyOregon State UniversityCorvallisOregonUSA
- Present address:
Department of BiologyStanford UniversityStanfordCaliforniaUSA
| | - Laurel C. Field
- Department of Integrative BiologyOregon State UniversityCorvallisOregonUSA
| | - Silke Bachhuber
- Department of Integrative BiologyOregon State UniversityCorvallisOregonUSA
| | | | - Robyn Cates
- College of Veterinary MedicineOregon State UniversityCorvallisOregonUSA
| | - Lesley Cohen
- College of Veterinary MedicineOregon State UniversityCorvallisOregonUSA
| | - Elin Crockett
- College of Veterinary MedicineOregon State UniversityCorvallisOregonUSA
| | - Michelle Degnin
- College of Veterinary MedicineOregon State UniversityCorvallisOregonUSA
| | - Maya K. Feezell
- Department of Integrative BiologyOregon State UniversityCorvallisOregonUSA
| | | | - Devyn Pires
- College of Veterinary MedicineOregon State UniversityCorvallisOregonUSA
| | | | - Zachary H. Randell
- Department of Integrative BiologyOregon State UniversityCorvallisOregonUSA
| | - Erick White
- Department of Integrative BiologyOregon State UniversityCorvallisOregonUSA
| | - Sarah A. Gravem
- Department of Integrative BiologyOregon State UniversityCorvallisOregonUSA
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Morgan MB, Ross J, Ellwanger J, Phrommala RM, Youngblood H, Qualley D, Williams J. Sea Anemones Responding to Sex Hormones, Oxybenzone, and Benzyl Butyl Phthalate: Transcriptional Profiling and in Silico Modelling Provide Clues to Decipher Endocrine Disruption in Cnidarians. Front Genet 2022; 12:793306. [PMID: 35087572 PMCID: PMC8787064 DOI: 10.3389/fgene.2021.793306] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2021] [Accepted: 12/24/2021] [Indexed: 01/09/2023] Open
Abstract
Endocrine disruption is suspected in cnidarians, but questions remain how occurs. Steroid sex hormones are detected in corals and sea anemones even though these animals do not have estrogen receptors and their repertoire of steroidogenic enzymes appears to be incomplete. Pathways associated with sex hormone biosynthesis and sterol signaling are an understudied area in cnidarian biology. The objective of this study was to identify a suite of genes that can be linked to exposure of endocrine disruptors. Exaiptasia diaphana were exposed to nominal 20ppb concentrations of estradiol (E2), testosterone (T), cholesterol, oxybenzone (BP-3), or benzyl butyl phthalate (BBP) for 4 h. Eleven genes of interest (GOIs) were chosen from a previously generated EST library. The GOIs are 17β-hydroxysteroid dehydrogenases type 14 (17β HSD14) and type 12 (17β HSD12), Niemann-Pick C type 2 (NPC2), Equistatin (EI), Complement component C3 (C3), Cathepsin L (CTSL), Patched domain-containing protein 3 (PTCH3), Smoothened (SMO), Desert Hedgehog (DHH), Zinc finger protein GLI2 (GLI2), and Vitellogenin (VTG). These GOIs were selected because of functional associations with steroid hormone biosynthesis; cholesterol binding/transport; immunity; phagocytosis; or Hedgehog signaling. Quantitative Real-Time PCR quantified expression of GOIs. In silico modelling utilized protein structures from Protein Data Bank as well as creating protein structures with SWISS-MODEL. Results show transcription of steroidogenic enzymes, and cholesterol binding/transport proteins have similar transcription profiles for E2, T, and cholesterol treatments, but different profiles when BP-3 or BBP is present. C3 expression can differentiate between exposures to BP-3 versus BBP as well as exposure to cholesterol versus sex hormones. In silico modelling revealed all ligands (E2, T, cholesterol, BBP, and BP-3) have favorable binding affinities with 17β HSD14, 17β HSD12, NPC2, SMO, and PTCH proteins. VTG expression was down-regulated in the sterol treatments but up-regulated in BP-3 and BBP treatments. In summary, these eleven GOIs collectively generate unique transcriptional profiles capable of discriminating between the five chemical exposures used in this investigation. This suite of GOIs are candidate biomarkers for detecting transcriptional changes in steroidogenesis, gametogenesis, sterol transport, and Hedgehog signaling. Detection of disruptions in these pathways offers new insight into endocrine disruption in cnidarians.
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Affiliation(s)
- Michael B Morgan
- Department of Biology, Berry College, Mount Berry, GA, United States.,Department of Chemistry and Biochemistry, Berry College, Mount Berry, GA, United States
| | - James Ross
- Department of Biology, Berry College, Mount Berry, GA, United States.,Department of Chemistry and Biochemistry, Berry College, Mount Berry, GA, United States.,Department of Microbiology and Immunology, Emory Vaccine Center, Emory University School of Medicine, Atlanta, GA, United States
| | - Joseph Ellwanger
- Department of Biology, Berry College, Mount Berry, GA, United States
| | | | - Hannah Youngblood
- Department of Biology, Berry College, Mount Berry, GA, United States.,Department of Chemistry and Biochemistry, Berry College, Mount Berry, GA, United States.,Department of Cellular Biology and Anatomy, Augusta University, Augusta, GA, United States
| | - Dominic Qualley
- Department of Chemistry and Biochemistry, Berry College, Mount Berry, GA, United States
| | - Jacob Williams
- Department of Biology, Berry College, Mount Berry, GA, United States
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Orel N, Fadeev E, Klun K, Ličer M, Tinta T, Turk V. Bacterial Indicators Are Ubiquitous Members of Pelagic Microbiome in Anthropogenically Impacted Coastal Ecosystem. Front Microbiol 2022; 12:765091. [PMID: 35111137 PMCID: PMC8801744 DOI: 10.3389/fmicb.2021.765091] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2021] [Accepted: 11/25/2021] [Indexed: 01/18/2023] Open
Abstract
Coastal zones are exposed to various anthropogenic impacts, such as different types of wastewater pollution, e.g., treated wastewater discharges, leakage from sewage systems, and agricultural and urban runoff. These various inputs can introduce allochthonous organic matter and microbes, including pathogens, into the coastal marine environment. The presence of fecal bacterial indicators in the coastal environment is usually monitored using traditional culture-based methods that, however, fail to detect their uncultured representatives. We have conducted a year-around in situ survey of the pelagic microbiome of the dynamic coastal ecosystem, subjected to different anthropogenic pressures to depict the seasonal and spatial dynamics of traditional and alternative fecal bacterial indicators. To provide an insight into the environmental conditions under which bacterial indicators thrive, a suite of environmental factors and bacterial community dynamics were analyzed concurrently. Analyses of 16S rRNA amplicon sequences revealed that the coastal microbiome was primarily structured by seasonal changes regardless of the distance from the wastewater pollution sources. On the other hand, fecal bacterial indicators were not affected by seasons and accounted for up to 34% of the sequence proportion for a given sample. Even more so, traditional fecal indicator bacteria (Enterobacteriaceae) and alternative wastewater-associated bacteria (Lachnospiraceae, Ruminococcaceae, Arcobacteraceae, Pseudomonadaceae and Vibrionaceae) were part of the core coastal microbiome, i.e., present at all sampling stations. Microbial source tracking and Lagrangian particle tracking, which we employed to assess the potential pollution source, revealed the importance of riverine water as a vector for transmission of allochthonous microbes into the marine system. Further phylogenetic analysis showed that the Arcobacteraceae in our data set was affiliated with the pathogenic Arcobacter cryaerophilus, suggesting that a potential exposure risk for bacterial pathogens in anthropogenically impacted coastal zones remains. We emphasize that molecular analyses combined with statistical and oceanographic models may provide new insights for environmental health assessment and reveal the potential source and presence of microbial indicators, which are otherwise overlooked by a cultivation approach.
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Affiliation(s)
- Neža Orel
- Marine Biology Station Piran, National Institute of Biology, Piran, Slovenia
- *Correspondence: Neža Orel,
| | - Eduard Fadeev
- Department of Functional and Evolutionary Ecology, University of Vienna, Vienna, Austria
| | - Katja Klun
- Marine Biology Station Piran, National Institute of Biology, Piran, Slovenia
| | - Matjaž Ličer
- Marine Biology Station Piran, National Institute of Biology, Piran, Slovenia
- Office for Meteorology, Hydrology and Oceanography, Slovenian Environment Agency, Ljubljana, Slovenia
| | - Tinkara Tinta
- Marine Biology Station Piran, National Institute of Biology, Piran, Slovenia
- Tinkara Tinta,
| | - Valentina Turk
- Marine Biology Station Piran, National Institute of Biology, Piran, Slovenia
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8
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Li M, Song G, Liu R, Huang X, Liu H. Inactivation and risk control of pathogenic microorganisms in municipal sludge treatment: A review. FRONTIERS OF ENVIRONMENTAL SCIENCE & ENGINEERING 2022; 16:70. [PMID: 34608423 PMCID: PMC8482957 DOI: 10.1007/s11783-021-1504-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/23/2021] [Revised: 06/28/2021] [Accepted: 07/12/2021] [Indexed: 05/05/2023]
Abstract
The rapid global spread of coronavirus disease 2019 (COVID-19) has promoted concern over human pathogens and their significant threats to public health security. The monitoring and control of human pathogens in public sanitation and health facilities are of great importance. Excessive sludge is an inevitable byproduct of sewage that contains human and animal feces in wastewater treatment plants (WWTPs). It is an important sink of different pollutants and pathogens, and the proper treatment and disposal of sludge are important to minimize potential risks to the environment and public health. However, there is a lack of comprehensive analysis of the diversity, exposure risks, assessment methods and inactivation techniques of pathogenic microorganisms in sludge. Based on this consideration, this review summarizes the control performance of pathogenic microorganisms such as enterovirus, Salmonella spp., and Escherichia coli by different sludge treatment technologies, including composting, anaerobic digestion, aerobic digestion, and microwave irradiation, and the mechanisms of pathogenic microorganism inactivation in sludge treatment processes are discussed. Additionally, this study reviews the diversity, detection methods, and exposure risks of pathogenic microorganisms in sludge. This review advances the quantitative assessment of pathogenic microorganism risks involved in sludge reuse and is practically valuable to optimize the treatment and disposal of sludge for pathogenic microorganism control.
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Affiliation(s)
- Mengtian Li
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, 100085 China
- University of Chinese Academy of Sciences, Beijing, 100049 China
| | - Ge Song
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, 100085 China
- University of Chinese Academy of Sciences, Beijing, 100049 China
| | - Ruiping Liu
- Center for Water and Ecology, School of Environment, Tsinghua University, Beijing, 100084 China
| | - Xia Huang
- School of Environment, Tsinghua University, Beijing, 100084 China
| | - Huijuan Liu
- Center for Water and Ecology, School of Environment, Tsinghua University, Beijing, 100084 China
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9
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Sweet M, Burian A, Bulling M. Corals as canaries in the coalmine: Towards the incorporation of marine ecosystems into the 'One Health' concept. J Invertebr Pathol 2021; 186:107538. [PMID: 33545133 DOI: 10.1016/j.jip.2021.107538] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2020] [Revised: 01/14/2021] [Accepted: 01/18/2021] [Indexed: 01/04/2023]
Abstract
'One World - One Health' is a developing concept which aims to explicitly incorporate linkages between the environment and human society into wildlife and human health care. Past work in the field has concentrated on aspects of disease, particularly emerging zoonoses, and focused on terrestrial systems. Here, we argue that marine environments are crucial components of the 'One World - One Health' framework, and that coral reefs are the epitome of its underlying philosophy. That is, they provide vast contributions to a wide range of ecosystem services with strong and direct links to human well-being. Further, the sensitivity of corals to climate change, and the current emergence of a wide range of diseases, make coral reefs ideal study systems to assess links, impacts, and feedback mechanisms that can affect human and ecosystem health. There are well established protocols for monitoring corals, as well as global networks of coral researchers, but there remain substantial challenges to understanding these complex systems, their health and links to provisioning of ecosystem services. We explore these challenges and conclude with a look at how developing technology offers potential ways of addressing them. We argue that a greater integration of coral reef research into the 'One World - One Health' framework will enrich our understanding of the many links within, and between, ecosystems and human society. This will ultimately support the development of measures for improving the health of both humans and the environment.
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Affiliation(s)
- Michael Sweet
- Aquatic Research Facility, Environmental Sustainability Research Centre, University of Derby, UK.
| | - Alfred Burian
- Aquatic Research Facility, Environmental Sustainability Research Centre, University of Derby, UK
| | - Mark Bulling
- Aquatic Research Facility, Environmental Sustainability Research Centre, University of Derby, UK
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10
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Adam TC, Burkepile DE, Holbrook SJ, Carpenter RC, Claudet J, Loiseau C, Thiault L, Brooks AJ, Washburn L, Schmitt RJ. Landscape-scale patterns of nutrient enrichment in a coral reef ecosystem: implications for coral to algae phase shifts. ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2021; 31:e2227. [PMID: 32918509 DOI: 10.1002/eap.2227] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/16/2020] [Revised: 05/01/2020] [Accepted: 06/15/2020] [Indexed: 06/11/2023]
Abstract
Nutrient pollution is altering coastal ecosystems worldwide. On coral reefs, excess nutrients can favor the production of algae at the expense of reef-building corals, yet the role of nutrients in driving community changes such as shifts from coral to macroalgae is not well understood. Here we investigate the potential role of anthropogenic nutrient loading in driving recent coral-to-macroalgae phase shifts on reefs in the lagoons surrounding the Pacific island of Moorea, French Polynesia. We use nitrogen (N) tissue content and stable isotopes (δ15 N) in an abundant macroalga (Turbinaria ornata) together with empirical models of nutrient discharge to describe spatial and temporal patterns of nutrient enrichment in the lagoons. We then employ time series data to test whether recent increases in macroalgae are associated with nutrients. Our results revealed that patterns of N enrichment were linked to several factors, including rainfall, wave-driven circulation, and distance from anthropogenic nutrient sources, especially human sewage. Reefs near large watersheds, where inputs of N from sewage and agriculture are high, have been consistently enriched in N for at least the last decade. In many of these areas, corals have decreased and macroalgae have increased, while reefs with lower levels of N input have maintained high cover of coral and low cover of macroalgae. Importantly, these patchy phase shifts to macroalgae have occurred despite substantial island-wide increases in the density and biomass of herbivorous fishes over the time period. Together, these results indicate that nutrient loading may be an important driver of coral-to-macroalgae phase shifts in the lagoons of Moorea even though the reefs harbor an abundant and diverse herbivore assemblage. These results emphasize the important role that bottom-up factors can play in driving coral-to-macroalgae phase shifts and underscore the critical importance of watershed management for reducing inputs of nutrients and other land-based pollutants to coral reef ecosystems.
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Affiliation(s)
- Thomas C Adam
- Marine Science Institute, University of California, Santa Barbara, California, 93106, USA
| | - Deron E Burkepile
- Marine Science Institute, University of California, Santa Barbara, California, 93106, USA
- Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, California, 93106, USA
| | - Sally J Holbrook
- Marine Science Institute, University of California, Santa Barbara, California, 93106, USA
- Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, California, 93106, USA
| | - Robert C Carpenter
- Department of Biology, California State University Northridge, Northridge, California, 91330, USA
| | - Joachim Claudet
- National Center for Scientific Research, PSL Université Paris, CRIOBE, USR 3278 CNRS-EPHE-UPVD, Maison des Océans, 195 rue Saint-Jacques, Paris, 75005, France
- Laboratoire d'Excellence CORAIL, Moorea, French Polynesia
| | - Charles Loiseau
- National Center for Scientific Research, PSL Université Paris, CRIOBE, USR 3278 CNRS-EPHE-UPVD, Maison des Océans, 195 rue Saint-Jacques, Paris, 75005, France
- Laboratoire d'Excellence CORAIL, Moorea, French Polynesia
| | - Lauric Thiault
- National Center for Scientific Research, PSL Université Paris, CRIOBE, USR 3278 CNRS-EPHE-UPVD, Maison des Océans, 195 rue Saint-Jacques, Paris, 75005, France
- Laboratoire d'Excellence CORAIL, Moorea, French Polynesia
| | - Andrew J Brooks
- Marine Science Institute, University of California, Santa Barbara, California, 93106, USA
| | - Libe Washburn
- Marine Science Institute, University of California, Santa Barbara, California, 93106, USA
- Department of Geography, University of California, Santa Barbara, California, 93106, USA
| | - Russell J Schmitt
- Marine Science Institute, University of California, Santa Barbara, California, 93106, USA
- Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, California, 93106, USA
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11
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Akmal KF, Shahbudin S. Baseline assessment of coral health and disease in Tioman Island Marine Park, Malaysia. COMMUNITY ECOL 2020. [DOI: 10.1007/s42974-020-00030-7] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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12
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Paulino GVB, Félix CR, Silvan CG, Andersen GL, Landell MF. Bacterial community and environmental factors associated to rivers runoff and their possible impacts on coral reef conservation. MARINE POLLUTION BULLETIN 2020; 156:111233. [PMID: 32510379 DOI: 10.1016/j.marpolbul.2020.111233] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2019] [Revised: 04/27/2020] [Accepted: 04/27/2020] [Indexed: 06/11/2023]
Abstract
Rivers potentially conduct important components as result of anthropogenic stressors for coral reefs. Molecular techniques are increasingly being used for monitoring biological and chemical monitoring of rivers and reefs. Here, we use PhyloChips™ to process surface water samples collected along two rivers and associated reefs in an environmental protection area in northeastern Brazil. Our results indicate that a significant part of Operational Taxonomic Units (OTUs) identified were able to survive the transition from freshwater to seawater, several of them belonging to genera implicated in human pathogenesis. The BBC:A ratio and functional prediction suggests that both study rivers are subject to fecal contamination and xenobiotics input and that the bacterial communities were more homogeneous in these environments. We suggest that protection actions adopted for reefs should be broadly extended to the surrounding environment, and that other bacterial group (besides cultivable coliforms) should be included in routine water quality monitoring.
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Affiliation(s)
| | - Ciro Ramon Félix
- Universidade Federal de Alagoas - UFAL, Campus A. C. Simões, Av. Lourival Melo Mota, s/n, CEP: 57072-900 Maceió, AL, Brazil
| | - Cinta Gomez Silvan
- Ecology Department, Earth Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, United States of America
| | - Gary L Andersen
- Ecology Department, Earth Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, United States of America
| | - Melissa Fontes Landell
- Universidade Federal de Alagoas - UFAL, Campus A. C. Simões, Av. Lourival Melo Mota, s/n, CEP: 57072-900 Maceió, AL, Brazil.
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13
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Häder DP, Banaszak AT, Villafañe VE, Narvarte MA, González RA, Helbling EW. Anthropogenic pollution of aquatic ecosystems: Emerging problems with global implications. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 713:136586. [PMID: 31955090 DOI: 10.1016/j.scitotenv.2020.136586] [Citation(s) in RCA: 192] [Impact Index Per Article: 48.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2019] [Revised: 01/05/2020] [Accepted: 01/06/2020] [Indexed: 04/15/2023]
Abstract
Aquatic ecosystems cover over two thirds of our planet and play a pivotal role in stabilizing the global climate as well as providing a large array of services for a fast-growing human population. However, anthropogenic activities increasingly provoke deleterious impacts in aquatic ecosystems. In this paper we discuss five sources of anthropogenic pollution that affect marine and freshwater ecosystems: sewage, nutrients and terrigenous materials, crude oil, heavy metals and plastics. Using specific locations as examples, we show that land-based anthropogenic activities have repercussions in freshwater and marine environments, and we detail the direct and indirect effects that these pollutants have on a range of aquatic organisms, even when the pollutant source is distant from the sink. While the issues covered here do focus on specific locations, they exemplify emerging problems that are increasingly common around the world. All these issues are in dire need of stricter environmental policies and legislations particularly for pollution at industrial levels, as well as solutions to mitigate the effects of anthropogenic pollutants and restore the important services provided by aquatic ecosystems for future generations.
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Affiliation(s)
- Donat-P Häder
- Friedrich-Alexander Universität, Dept. Biology, Neue Str. 9, D-91096 Möhrendorf, Germany.
| | - Anastazia T Banaszak
- Unidad Académica de Sistemas Arrecifales, Instituto de Ciencias del Mar y Limnología, Universidad Nacional Autónoma de México, Puerto Morelos, Mexico
| | - Virginia E Villafañe
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Argentina; Estación de Fotobiología Playa Unión, Casilla de Correos N° 15, 9103 Rawson, Chubut, Argentina
| | - Maite A Narvarte
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Argentina; Centro de Investigación Aplicada y Transferencia Tecnológica en Recursos Marinos Almirante Storni, Escuela Superior de Ciencias Marinas, Universidad Nacional del Comahue, San Martín 247, 8520 San Antonio Oeste, Río Negro, Argentina
| | - Raúl A González
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Argentina; Centro de Investigación Aplicada y Transferencia Tecnológica en Recursos Marinos Almirante Storni, Escuela Superior de Ciencias Marinas, Universidad Nacional del Comahue, San Martín 247, 8520 San Antonio Oeste, Río Negro, Argentina
| | - E Walter Helbling
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Argentina; Estación de Fotobiología Playa Unión, Casilla de Correos N° 15, 9103 Rawson, Chubut, Argentina
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14
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Cramer KL, Jackson JBC, Donovan MK, Greenstein BJ, Korpanty CA, Cook GM, Pandolfi JM. Widespread loss of Caribbean acroporid corals was underway before coral bleaching and disease outbreaks. SCIENCE ADVANCES 2020; 6:eaax9395. [PMID: 32426458 PMCID: PMC7176417 DOI: 10.1126/sciadv.aax9395] [Citation(s) in RCA: 41] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/08/2019] [Accepted: 01/09/2020] [Indexed: 05/12/2023]
Abstract
The mass mortality of acroporid corals has transformed Caribbean reefs from coral- to macroalgal-dominated habitats since systematic monitoring began in the 1970s. Declines have been attributed to overfishing, pollution, sea urchin and coral disease, and climate change, but the mechanisms are unresolved due to the dearth of pre-1970s data. We used paleoecological, historical, and survey data to track Acropora presence and dominance throughout the Caribbean from the prehuman period to present. Declines in dominance from prehuman values first occurred in the 1950s for Acropora palmata and the 1960s for Acropora cervicornis, decades before outbreaks of acroporid disease or bleaching. We compared trends in Acropora dominance since 1950 to potential regional and local drivers. Human population negatively affected and consumption of fertilizer for agriculture positively affected A. palmata dominance, the latter likely due to lower human presence in agricultural areas. The earlier, local roots of Caribbean Acropora declines highlight the urgency of mitigating local human impacts.
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Affiliation(s)
- Katie L. Cramer
- Julie Ann Wrigley Global Institute of Sustainability, Arizona State University, Tempe, AZ 85281, USA
- Center for Oceans, Conservation International, Honolulu, HI 96816, USA
| | - Jeremy B. C. Jackson
- Center for Marine Biodiversity and Conservation, Scripps Institution of Oceanography, UC San Diego, La Jolla, CA 92093, USA
- Center for Biodiversity and Conservation, American Museum of Natural History, New York, NY 10024, USA
- Smithsonian Tropical Research Institute, Apartado Postal 0843-03092, Panamá, República de Panamá
- Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, DC 20013-7012, USA
| | - Mary K. Donovan
- Hawai‘i Institute of Marine Biology, University of Hawai‘i at Mānoa, Kāne’ohe, HI 96744, USA
- Marine Science Institute, University of California Santa Barbara, Santa Barbara, CA 93106, USA
| | - Benjamin J. Greenstein
- School of Social and Natural Sciences, Roger Williams University, Bristol, RI 02809, USA
| | - Chelsea A. Korpanty
- MARUM Center for Marine Environmental Sciences, University of Bremen, Bremen 28359, Germany
| | - Geoffrey M. Cook
- Department of Biology and Health Science, New England College, Henniker, NH 03242, USA
| | - John M. Pandolfi
- Centre for Marine Science and School of Biological Sciences, ARC Centre of Excellence for Coral Reef Studies, The University of Queensland, St Lucia, Queensland 4072, Australia
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15
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Sánchez-Quinto A, Costa JCD, Zamboni NS, Sanches FHC, Principe SC, Viotto EV, Casagranda E, Veiga-Lima FAD, Possamai B, Faroni-Perez L. Development of a conceptual framework for the management of biodiversity and ecosystem services in the Mexican Caribbean. BIOTA NEOTROPICA 2020. [DOI: 10.1590/1676-0611-bn-2019-0901] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Abstract: Coral reefs and mangroves support rich biodiversity and provide ecosystem services that range from food, recreational benefits and coastal protection services, among others. They are one of the most threatened ecosystems by urbanization processes. In this context, we developed a conceptual framework for the management of biodiversity and ecosystem services for these coastal environments. We based our workflow on two sections: “Information base” and “Governance” and use the Puerto Morelos Coastal region as a case study for coastal protection. Puerto Morelos is between two of the most touristic destinations of Mexico (Playa del Carmen and Cancun) that has experienced an increase of population in the past four decades resulting in an intensification of multiple threats to its ecosystems. We characterized the two ecosystems with a “Management Units” strategy. An expert-based ecosystem services matrix was also described in order to connect mangroves and coral reef ecosystems with the multiple beneficiaries. Then an ecosystem model (conceptual model and Global Biodiversity model) was developed. The conceptual model was useful in understanding the interplay processes between systems regarding the ecosystem service of “Coastal Protection”. The Global Biodiversity model evidenced the human-induced shifts in the biodiversity for mangrove and coral reefs ecosystems. Also, a projection for 2035 of “best” and “worst” scenarios was applied using GLOBIO3. A DPSIR conceptual framework was used to analyze environmental problems regarding ecosystem services maintenance. Finally, we evaluated a set of policies associated with these ecosystems that favor coastal protection integrity. This framework facilitates the identification of the most relevant processes and controls about the provision of coastal protection service. It can also be useful to better target management actions and as a tool to identify future management needs to tackle the challenges preventing more effective conservation of coastal environments.
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Affiliation(s)
| | | | | | | | | | - Evangelina V. Viotto
- Centro de Investigación Científica y de Transferencia Tecnológica a la Producción, Argentina
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16
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Alvarez-Filip L, Estrada-Saldívar N, Pérez-Cervantes E, Molina-Hernández A, González-Barrios FJ. A rapid spread of the stony coral tissue loss disease outbreak in the Mexican Caribbean. PeerJ 2019; 7:e8069. [PMID: 31788355 PMCID: PMC6883952 DOI: 10.7717/peerj.8069] [Citation(s) in RCA: 85] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2019] [Accepted: 10/20/2019] [Indexed: 11/20/2022] Open
Abstract
Caribbean reef corals have experienced unprecedented declines from climate change, anthropogenic stressors and infectious diseases in recent decades. Since 2014, a highly lethal, new disease, called stony coral tissue loss disease, has impacted many reef-coral species in Florida. During the summer of 2018, we noticed an anomalously high disease prevalence affecting different coral species in the northern portion of the Mexican Caribbean. We assessed the severity of this outbreak in 2018/2019 using the AGRRA coral protocol to survey 82 reef sites across the Mexican Caribbean. Then, using a subset of 14 sites, we detailed information from before the outbreak (2016/2017) to explore the consequences of the disease on the condition and composition of coral communities. Our findings show that the disease outbreak has already spread across the entire region by affecting similar species (with similar disease patterns) to those previously described for Florida. However, we observed a great variability in prevalence and tissue mortality that was not attributable to any geographical gradient. Using long-term data, we determined that there is no evidence of such high coral disease prevalence anywhere in the region before 2018, which suggests that the entire Mexican Caribbean was afflicted by the disease within a few months. The analysis of sites that contained pre-outbreak information showed that this event considerably increased coral mortality and severely changed the structure of coral communities in the region. Given the high prevalence and lethality of this disease, and the high number of susceptible species, we encourage reef researchers, managers and stakeholders across the Western Atlantic to accord it the highest priority for the near future.
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Affiliation(s)
- Lorenzo Alvarez-Filip
- Biodiversity and Reef Conservation Laboratory, Unidad Académica de Sistemas Arrecifales, Instituto de Ciencias del Mar y Limnología, Universidad Nacional Autónoma de México, Puerto Morelos, Quintana Roo, Mexico
| | - Nuria Estrada-Saldívar
- Biodiversity and Reef Conservation Laboratory, Unidad Académica de Sistemas Arrecifales, Instituto de Ciencias del Mar y Limnología, Universidad Nacional Autónoma de México, Puerto Morelos, Quintana Roo, Mexico
| | - Esmeralda Pérez-Cervantes
- Biodiversity and Reef Conservation Laboratory, Unidad Académica de Sistemas Arrecifales, Instituto de Ciencias del Mar y Limnología, Universidad Nacional Autónoma de México, Puerto Morelos, Quintana Roo, Mexico
| | - Ana Molina-Hernández
- Biodiversity and Reef Conservation Laboratory, Unidad Académica de Sistemas Arrecifales, Instituto de Ciencias del Mar y Limnología, Universidad Nacional Autónoma de México, Puerto Morelos, Quintana Roo, Mexico
| | - Francisco J. González-Barrios
- Biodiversity and Reef Conservation Laboratory, Unidad Académica de Sistemas Arrecifales, Instituto de Ciencias del Mar y Limnología, Universidad Nacional Autónoma de México, Puerto Morelos, Quintana Roo, Mexico
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17
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Meyer JL, Castellanos-Gell J, Aeby GS, Häse CC, Ushijima B, Paul VJ. Microbial Community Shifts Associated With the Ongoing Stony Coral Tissue Loss Disease Outbreak on the Florida Reef Tract. Front Microbiol 2019; 10:2244. [PMID: 31608047 PMCID: PMC6769089 DOI: 10.3389/fmicb.2019.02244] [Citation(s) in RCA: 61] [Impact Index Per Article: 12.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2019] [Accepted: 09/12/2019] [Indexed: 12/31/2022] Open
Abstract
As many as 22 of the 45 coral species on the Florida Reef Tract are currently affected by stony coral tissue loss disease (SCTLD). The ongoing disease outbreak was first observed in 2014 in Southeast Florida near Miami and as of early 2019 has been documented from the northernmost reaches of the reef tract in Martin County down to Key West. We examined the microbiota associated with disease lesions and apparently healthy tissue on diseased colonies of Montastraea cavernosa, Orbicella faveolata, Diploria labyrinthiformis, and Dichocoenia stokesii. Analysis of differentially abundant taxa between disease lesions and apparently healthy tissue identified five unique amplicon sequence variants enriched in the diseased tissue in three of the coral species (all except O. faveolata), namely an unclassified genus of Flavobacteriales and sequences identified as Fusibacter (Clostridiales), Planktotalea (Rhodobacterales), Algicola (Alteromonadales), and Vibrio (Vibrionales). In addition, several groups of likely opportunistic or saprophytic colonizers such as Epsilonbacteraeota, Patescibacteria, Clostridiales, Bacteroidetes, and Rhodobacterales were also enriched in SCTLD disease lesions. This work represents the first microbiological characterization of SCTLD, as an initial step toward identifying the potential pathogen(s) responsible for SCTLD.
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Affiliation(s)
- Julie L. Meyer
- Soil and Water Sciences Department, University of Florida, Gainesville, FL, United States
| | - Jessy Castellanos-Gell
- Soil and Water Sciences Department, University of Florida, Gainesville, FL, United States
| | - Greta S. Aeby
- Smithsonian Marine Station, Fort Pierce, FL, United States
| | - Claudia C. Häse
- Carlson College of Veterinary Medicine, Oregon State University, Corvallis, OR, United States
| | - Blake Ushijima
- Smithsonian Marine Station, Fort Pierce, FL, United States
- Carlson College of Veterinary Medicine, Oregon State University, Corvallis, OR, United States
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18
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Pollock FJ, Lamb JB, van de Water JAJM, Smith HA, Schaffelke B, Willis BL, Bourne DG. Reduced diversity and stability of coral-associated bacterial communities and suppressed immune function precedes disease onset in corals. ROYAL SOCIETY OPEN SCIENCE 2019; 6:190355. [PMID: 31312497 PMCID: PMC6599770 DOI: 10.1098/rsos.190355] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2019] [Accepted: 05/08/2019] [Indexed: 05/28/2023]
Abstract
Disease is an emerging threat to coral reef ecosystems worldwide, highlighting the need to understand how environmental conditions interact with coral immune function and associated microbial communities to affect holobiont health. Increased coral disease incidence on reefs adjacent to permanently moored platforms on Australia's Great Barrier Reef provided a unique case study to investigate environment-host-microbe interactions in situ. Here, we evaluate coral-associated bacterial community (16S rRNA amplicon sequencing), immune function (protein-based prophenoloxidase-activating system), and water quality parameters before, during and after a disease event. Over the course of the study, 31% of tagged colonies adjacent to platforms developed signs of white syndrome (WS), while all control colonies on a platform-free reef remained visually healthy. Corals adjacent to platforms experienced significant reductions in coral immune function. Additionally, the corals at platform sites that remained visually healthy throughout the study had reduced bacterial diversity compared to healthy colonies at the platform-free site. Interestingly, prior to the observation of macroscopic disease, corals that would develop WS had reduced bacterial diversity and significantly greater community heterogeneity between colonies compared to healthy corals at the same location. These results suggest that activities associated with offshore marine infrastructure impacts coral immunocompetence and associated bacterial community, which affects the susceptibility of corals to disease.
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Affiliation(s)
- F. Joseph Pollock
- College of Science and Engineering, James Cook University, Townsville, Queensland, Australia
- ARC Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Queensland, Australia
- Australian Institute of Marine Science, Townsville, Queensland, Australia
- AIMS@JCU, Australian Institute of Marine Science and James Cook University, Townsville, Queensland, Australia
- Department of Ecology and Evolutionary Biology, Pennsylvania State University, University Park, PA, USA
| | - Joleah B. Lamb
- Department of Ecology and Evolutionary Biology, University of California, Irvine, CA, USA
| | - Jeroen A. J. M. van de Water
- College of Science and Engineering, James Cook University, Townsville, Queensland, Australia
- ARC Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Queensland, Australia
- Australian Institute of Marine Science, Townsville, Queensland, Australia
- AIMS@JCU, Australian Institute of Marine Science and James Cook University, Townsville, Queensland, Australia
- Centre Scientifique de Monaco, 8 Quai Antoine 1er, Monaco, Monaco
| | - Hillary A. Smith
- College of Science and Engineering, James Cook University, Townsville, Queensland, Australia
| | - Britta Schaffelke
- Australian Institute of Marine Science, Townsville, Queensland, Australia
| | - Bette L. Willis
- College of Science and Engineering, James Cook University, Townsville, Queensland, Australia
- ARC Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Queensland, Australia
- AIMS@JCU, Australian Institute of Marine Science and James Cook University, Townsville, Queensland, Australia
| | - David G. Bourne
- College of Science and Engineering, James Cook University, Townsville, Queensland, Australia
- Australian Institute of Marine Science, Townsville, Queensland, Australia
- AIMS@JCU, Australian Institute of Marine Science and James Cook University, Townsville, Queensland, Australia
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19
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Draft Genome Sequences of 38 Serratia marcescens Isolates Associated with Acroporid Serratiosis. Microbiol Resour Announc 2019; 8:8/14/e00194-19. [PMID: 30948466 PMCID: PMC6449557 DOI: 10.1128/mra.00194-19] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023] Open
Abstract
Serratia marcescens is a Gram-negative bacterium causally linked to acroporid serratiosis, a form of white pox disease implicated in the decline of elkhorn corals. We report draft genomes of 38 S. marcescens isolates collected from host and nonhost sources. Serratia marcescens is a Gram-negative bacterium causally linked to acroporid serratiosis, a form of white pox disease implicated in the decline of elkhorn corals. We report draft genomes of 38 S. marcescens isolates collected from host and nonhost sources. The availability of these genomes will aid future analyses of acroporid serratiosis.
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20
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Abaya LM, Wiegner TN, Beets JP, Colbert SL, Carlson KM, Kramer KL. Spatial distribution of sewage pollution on a Hawaiian coral reef. MARINE POLLUTION BULLETIN 2018; 130:335-347. [PMID: 29866567 DOI: 10.1016/j.marpolbul.2018.03.028] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2017] [Revised: 03/16/2018] [Accepted: 03/16/2018] [Indexed: 06/08/2023]
Abstract
While sewage pollution is contributing to the global decline of coral reefs, its offshore extent and direct reef impacts from water column mixing and benthic seeps are poorly documented. We addressed this knowledge gap on a Hawaiian coral reef using sewage indicator and benthic cover measurements, macroalgal bioassays, and a pollution scoring tool. Fecal indicator bacteria (FIB) and nutrient concentrations were spatially variable in surface and benthic waters, with shoreline values being highest. Shoreline macroalgae δ15N and %N indicated high nitrogen loads containing sewage, while offshore surface and benthic values suggested lower nitrogen loads from environmental sources. Coral cover was negatively correlated with FIB, macroalgal δ15N, and nutrient concentrations. Benthic salinity and temperature measurements detected daily tidal groundwater pulses which may explain these associations. While pollution scores revealed that sewage was largely concentrated along the shoreline, results showed some reached the reef and may be contributing to its declining condition.
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Affiliation(s)
- Leilani M Abaya
- Tropical Conservation Biology and Environmental Science Graduate Program, University of Hawai'i at Hilo, 200 W. Kawili St., Hilo, HI 96720, USA; Marine Science Department, University of Hawai'i at Hilo, 200 W. Kawili St, Hilo, HI 96720, USA.
| | - Tracy N Wiegner
- Marine Science Department, University of Hawai'i at Hilo, 200 W. Kawili St, Hilo, HI 96720, USA.
| | - James P Beets
- Marine Science Department, University of Hawai'i at Hilo, 200 W. Kawili St, Hilo, HI 96720, USA.
| | - Steven L Colbert
- Marine Science Department, University of Hawai'i at Hilo, 200 W. Kawili St, Hilo, HI 96720, USA.
| | - Kaile'a M Carlson
- Marine Science Department, University of Hawai'i at Hilo, 200 W. Kawili St, Hilo, HI 96720, USA; National Park Service, Kaloko-Honokōhau NHP, 73-4786 Kanalani St., #14, Kailua Kona, HI 96743, USA.
| | - K Lindsey Kramer
- Marine Science Department, University of Hawai'i at Hilo, 200 W. Kawili St, Hilo, HI 96720, USA; Pacific Cooperative Studies Unit - Hawai'i Division of Aquatic Resources, 75-308B Kealakehe Pkwy, Kailua Kona, HI 96740, USA.
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21
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Abaya LM, Wiegner TN, Colbert SL, Beets JP, Carlson KM, Kramer KL, Most R, Couch CS. A multi-indicator approach for identifying shoreline sewage pollution hotspots adjacent to coral reefs. MARINE POLLUTION BULLETIN 2018; 129:70-80. [PMID: 29680569 DOI: 10.1016/j.marpolbul.2018.02.005] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/28/2017] [Revised: 02/01/2018] [Accepted: 02/02/2018] [Indexed: 06/08/2023]
Abstract
Sewage pollution is contributing to the global decline of coral reefs. Identifying locations where it is entering waters near reefs is therefore a management priority. Our study documented shoreline sewage pollution hotspots in a coastal community with a fringing coral reef (Puakō, Hawai'i) using dye tracer studies, sewage indicator measurements, and a pollution scoring tool. Sewage reached shoreline waters within 9 h to 3 d. Fecal indicator bacteria concentrations were high and variable, and δ15N macroalgal values were indicative of sewage at many stations. Shoreline nutrient concentrations were two times higher than those in upland groundwater. Pollution hotspots were identified with a scoring tool using three sewage indicators. It confirmed known locations of sewage pollution from dye tracer studies. Our study highlights the need for a multi-indicator approach and scoring tool to identify sewage pollution hotspots. This approach will be useful for other coastal communities grappling with sewage pollution.
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Affiliation(s)
- Leilani M Abaya
- Tropical Conservation Biology and Environmental Science Graduate Program, University of Hawai'i at Hilo, 200 W. Kawili St., Hilo, HI 96720, USA; Marine Science Department, University of Hawai'i at Hilo, 200 W. Kawili St., Hilo, HI 96720, USA.
| | - Tracy N Wiegner
- Marine Science Department, University of Hawai'i at Hilo, 200 W. Kawili St., Hilo, HI 96720, USA.
| | - Steven L Colbert
- Marine Science Department, University of Hawai'i at Hilo, 200 W. Kawili St., Hilo, HI 96720, USA.
| | - James P Beets
- Marine Science Department, University of Hawai'i at Hilo, 200 W. Kawili St., Hilo, HI 96720, USA.
| | - Kaile'a M Carlson
- Marine Science Department, University of Hawai'i at Hilo, 200 W. Kawili St., Hilo, HI 96720, USA; National Park Service, Kaloko-Honokōhau National Historic Park, 73-4786 Kanalani St., #14, Kailua-Kona, HI 96743, USA.
| | - K Lindsey Kramer
- Marine Science Department, University of Hawai'i at Hilo, 200 W. Kawili St., Hilo, HI 96720, USA; Pacific Cooperative Studies Unit, Hawai'i Division of Aquatic Resources, 75-308B Kealakehe Pkwy, Kailua Kona, HI 96740, USA
| | - Rebecca Most
- The Nature Conservancy, 923 Nuuanu Ave., Honolulu, HI 96817, USA.
| | - Courtney S Couch
- The Nature Conservancy, 923 Nuuanu Ave., Honolulu, HI 96817, USA; Hawai'i Institute of Marine Biology, P.O. Box 1346, Kāne'ohe, HI 96744, USA
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22
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Arias-González JE, Fung T, Seymour RM, Garza-Pérez JR, Acosta-González G, Bozec YM, Johnson CR. A coral-algal phase shift in Mesoamerica not driven by changes in herbivorous fish abundance. PLoS One 2017; 12:e0174855. [PMID: 28445546 PMCID: PMC5405933 DOI: 10.1371/journal.pone.0174855] [Citation(s) in RCA: 58] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2016] [Accepted: 03/16/2017] [Indexed: 01/12/2023] Open
Abstract
Coral-algal phase shifts in which coral cover declines to low levels and is replaced by algae have often been documented on coral reefs worldwide. This has motivated coral reef management responses that include restriction and regulation of fishing, e.g. herbivorous fish species. However, there is evidence that eutrophication and sedimentation can be at least as important as a reduction in herbivory in causing phase shifts. These threats arise from coastal development leading to increased nutrient and sediment loads, which stimulate algal growth and negatively impact corals respectively. Here, we first present results of a dynamic process-based model demonstrating that in addition to overharvesting of herbivorous fish, bottom-up processes have the potential to precipitate coral-algal phase shifts on Mesoamerican reefs. We then provide an empirical example that exemplifies this on coral reefs off Mahahual in Mexico, where a shift from coral to algal dominance occurred over 14 years, during which there was little change in herbivore biomass but considerable development of tourist infrastructure. Our results indicate that coastal development can compromise the resilience of coral reefs and that watershed and coastal zone management together with the maintenance of functional levels of fish herbivory are critical for the persistence of coral reefs in Mesoamerica.
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Affiliation(s)
- Jesús Ernesto Arias-González
- Laboratorio de Ecología de Ecosistemas de Arrecifes Coralinos, Departamento de Recursos del Mar, Centro de Investigación y Estudios Avanzados I.P.N.-Unidad Mérida. Carr. Ant. Progreso Km. 6, A.P. 73 Cordemex, Mérida, Yucatan, Mexico
- * E-mail:
| | - Tak Fung
- National University of Singapore, Department of Biological Sciences, 14 Science Drive 4, Singapore, Singapore
| | - Robert M. Seymour
- Centre for Mathematics & Physics in the Life Sciences & Experimental Biology, & Department of Mathematics, University College London, London United Kingdom
| | - Joaquín Rodrigo Garza-Pérez
- Unidad Multidisciplinaria de Docencia e Investigación Sisal, Facultad de Ciencias, Universidad Nacional Autónoma de México, Puerto de Abrigo S/N, Sisal Yucatán Mexico
| | - Gilberto Acosta-González
- Unidad de Ciencias del Agua. Centro de Investigación Científica de Yucatán A.C. Calle 8 no. 29 Mza 39 SM 64. Cancún. Q. Roo. C.P. México
| | - Yves-Marie Bozec
- Marine Spatial Ecology Lab, School of Biological Sciences & Australian Research Council Centre of Excellence for Coral Reef Studies, University of Queensland, St. Lucia, Queensland, Australia
| | - Craig R. Johnson
- Institute for Marine & Antarctic Studies, Private Bag 129, University of Tasmania, Hobart, TAS, Australia
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23
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Sutherland KP, Berry B, Park A, Kemp DW, Kemp KM, Lipp EK, Porter JW. Shifting white pox aetiologies affecting Acropora palmata in the Florida Keys, 1994-2014. Philos Trans R Soc Lond B Biol Sci 2016; 371:rstb.2015.0205. [PMID: 26880837 DOI: 10.1098/rstb.2015.0205] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
We propose 'the moving target hypothesis' to describe the aetiology of a contemporary coral disease that differs from that of its historical disease state. Hitting the target with coral disease aetiology is a complex pursuit that requires understanding of host and environment, and may lack a single pathogen solution. White pox disease (WPX) affects the Caribbean coral Acropora palmata. Acroporid serratiosis is a form of WPX for which the bacterial pathogen (Serratia marcescens) has been established. We used long-term (1994-2014) photographic monitoring to evaluate historical and contemporary epizootiology and aetiology of WPX affecting A. palmata at eight reefs in the Florida Keys. Ranges of WPX prevalence over time (0-71.4%) were comparable for the duration of the 20-year study. Whole colony mortality and disease severity were high in historical (1994-2004), and low in contemporary (2008-2014), outbreaks of WPX. Acroporid serratiosis was diagnosed for some historical (1999, 2003) and contemporary (2012, 2013) outbreaks, but this form of WPX was not confirmed for all WPX cases. Our results serve as a context for considering aetiology as a moving target for WPX and other coral diseases for which pathogens are established and/or candidate pathogens are identified. Coral aetiology investigations completed to date suggest that changes in pathogen, host and/or environment alter the disease state and complicate diagnosis.
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Affiliation(s)
| | - Brett Berry
- Odum School of Ecology, University of Georgia, Athens, GA 30602, USA
| | - Andrew Park
- Odum School of Ecology, University of Georgia, Athens, GA 30602, USA
| | - Dustin W Kemp
- Odum School of Ecology, University of Georgia, Athens, GA 30602, USA
| | - Keri M Kemp
- Odum School of Ecology, University of Georgia, Athens, GA 30602, USA Department of Environmental Health Science, University of Georgia, Athens, GA 30602, USA
| | - Erin K Lipp
- Department of Environmental Health Science, University of Georgia, Athens, GA 30602, USA
| | - James W Porter
- Odum School of Ecology, University of Georgia, Athens, GA 30602, USA
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Chu ND, Vollmer SV. Caribbean corals house shared and host-specific microbial symbionts over time and space. ENVIRONMENTAL MICROBIOLOGY REPORTS 2016; 8:493-500. [PMID: 27083502 DOI: 10.1111/1758-2229.12412] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
The rise of coral diseases has triggered a surge of interest in coral microbial communities. But to fully understand how the coral microbiome may cause or respond to disease, we must first understand structure and variation in the healthy coral microbiome. We used 16S rRNA sequencing to characterize the microbiomes of 100 healthy coral colonies from six Caribbean coral species (Acropora cervicornis, A. palmata, Diploria labyrinthiformis, Diploria strigosa, Porites astreoides and P. furcata) across four reefs and three time points over 1 year. We found host species to be the strongest driver of coral microbiome structure across site and time. Analysis of the core microbiome revealed remarkable similarity in the bacterial taxa represented across coral hosts and many bacterial phylotypes shared across all corals sampled. Some of these widespread bacterial taxa have been identified in Pacific corals, indicating that a core coral microbiome may extend across oceans. Core bacterial phylotypes that were unique to each coral were taxonomically diverse, suggesting that different coral hosts provide persistent, divergent niches for bacteria.
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Affiliation(s)
- Nathaniel D Chu
- Marine Science Center, Northeastern University, 430 Nahant Road, Nahant, MA, 01908, USA
- Smithsonian Tropical Research Institute, Bocas del Toro, Panama
- Microbiology Graduate Program, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA
| | - Steven V Vollmer
- Marine Science Center, Northeastern University, 430 Nahant Road, Nahant, MA, 01908, USA
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Ziegler M, Roik A, Porter A, Zubier K, Mudarris MS, Ormond R, Voolstra CR. Coral microbial community dynamics in response to anthropogenic impacts near a major city in the central Red Sea. MARINE POLLUTION BULLETIN 2016; 105:629-40. [PMID: 26763316 DOI: 10.1016/j.marpolbul.2015.12.045] [Citation(s) in RCA: 110] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2015] [Revised: 11/25/2015] [Accepted: 12/22/2015] [Indexed: 05/20/2023]
Abstract
Coral-associated bacteria play an increasingly recognized part in coral health. We investigated the effect of local anthropogenic impacts on coral microbial communities on reefs near Jeddah, the largest city on the Saudi Arabian coast of the central Red Sea. We analyzed the bacterial community structure of water and corals (Pocillopora verrucosa and Acropora hemprichii) at sites that were relatively unimpacted, exposed to sedimentation & local sewage, or in the discharge area of municipal wastewaters. Coral microbial communities were significantly different at impacted sites: in both corals the main symbiotic taxon decreased in abundance. In contrast, opportunistic bacterial families, such as e.g. Vibrionaceae and Rhodobacteraceae, were more abundant in corals at impacted sites. In conclusion, microbial community response revealed a measurable footprint of anthropogenic impacts to coral ecosystems close to Jeddah, even though the corals appeared visually healthy.
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Affiliation(s)
- Maren Ziegler
- Red Sea Research Center, Division of Biological and Environmental Science and Engineering, 4700 King Abdullah University of Science and Technology (KAUST), 23955-6900 Thuwal, Saudi Arabia
| | - Anna Roik
- Red Sea Research Center, Division of Biological and Environmental Science and Engineering, 4700 King Abdullah University of Science and Technology (KAUST), 23955-6900 Thuwal, Saudi Arabia
| | - Adam Porter
- College of Life and Environmental Sciences: Biosciences, Geoffrey Pope Building, University of Exeter, Stocker Road, Exeter EX4 4QD, United Kingdom
| | - Khalid Zubier
- Faculty of Marine Science, King Abdulaziz University, PO Box 80207, Jeddah 21589, Saudi Arabia
| | - Mohammed S Mudarris
- Faculty of Marine Science, King Abdulaziz University, PO Box 80207, Jeddah 21589, Saudi Arabia
| | - Rupert Ormond
- Faculty of Marine Science, King Abdulaziz University, PO Box 80207, Jeddah 21589, Saudi Arabia; Centre for Marine Biotechnology and Biodiversity, School of Life Sciences, Heriot-Watt University, Riccarton, Edinburgh EH14 4AS, Scotland, United Kingdom
| | - Christian R Voolstra
- Red Sea Research Center, Division of Biological and Environmental Science and Engineering, 4700 King Abdullah University of Science and Technology (KAUST), 23955-6900 Thuwal, Saudi Arabia.
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26
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Poole AZ, Kitchen SA, Weis VM. The Role of Complement in Cnidarian-Dinoflagellate Symbiosis and Immune Challenge in the Sea Anemone Aiptasia pallida. Front Microbiol 2016; 7:519. [PMID: 27148208 PMCID: PMC4840205 DOI: 10.3389/fmicb.2016.00519] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2015] [Accepted: 03/29/2016] [Indexed: 01/04/2023] Open
Abstract
The complement system is an innate immune pathway that in vertebrates, is responsible for initial recognition and ultimately phagocytosis and destruction of microbes. Several complement molecules including C3, Factor B, and mannose binding lectin associated serine proteases (MASP) have been characterized in invertebrates and while most studies have focused on their conserved role in defense against pathogens, little is known about their role in managing beneficial microbes. The purpose of this study was to (1) characterize complement pathway genes in the symbiotic sea anemone Aiptasia pallida, (2) investigate the evolution of complement genes in invertebrates, and (3) examine the potential dual role of complement genes Factor B and MASP in the onset and maintenance of cnidarian-dinoflagellate symbiosis and immune challenge using qPCR based studies. The results demonstrate that A. pallida has multiple Factor B genes (Ap_Bf-1, Ap_Bf-2a, and Ap_Bf-2b) and one MASP gene (Ap_MASP). Phylogenetic analysis indicates that the evolutionary history of complement genes is complex, and there have been many gene duplications or gene loss events, even within members of the same phylum. Gene expression analyses revealed a potential role for complement in both onset and maintenance of cnidarian-dinoflagellate symbiosis and immune challenge. Specifically, Ap_Bf-1 and Ap_MASP are significantly upregulated in the light at the onset of symbiosis and in response to challenge with the pathogen Serratia marcescens suggesting that they play a role in the initial recognition of both beneficial and harmful microbes. Ap_Bf-2b in contrast, was generally downregulated during the onset and maintenance of symbiosis and in response to challenge with S. marcescens. Therefore, the exact role of Ap_Bf-2b in response to microbes remains unclear, but the results suggest that the presence of microbes leads to repressed expression. Together, these results indicate functional divergence between Ap_Bf-1 and Ap_Bf-2b, and that Ap_Bf-1 and Ap_MASP may be functioning together in an ancestral hybrid of the lectin and alternative complement pathways. Overall, this study provides information on the role of the complement system in a basal metazoan and its role in host-microbe interactions.
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Affiliation(s)
- Angela Z Poole
- Department of Integrative Biology, Oregon State UniversityCorvallis, OR, USA; Department of Biology, Western Oregon UniverstiyMonmouth, OR, USA
| | - Sheila A Kitchen
- Department of Integrative Biology, Oregon State University Corvallis, OR, USA
| | - Virginia M Weis
- Department of Integrative Biology, Oregon State University Corvallis, OR, USA
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27
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Yoshioka RM, Kim CJS, Tracy AM, Most R, Harvell CD. Linking sewage pollution and water quality to spatial patterns of Porites lobata growth anomalies in Puako, Hawaii. MARINE POLLUTION BULLETIN 2016; 104:313-321. [PMID: 26781454 DOI: 10.1016/j.marpolbul.2016.01.002] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/28/2015] [Revised: 12/29/2015] [Accepted: 01/05/2016] [Indexed: 06/05/2023]
Abstract
Sewage pollution threatens the health of coastal populations and ecosystems, including coral reefs. We investigated spatial patterns of sewage pollution in Puako, Hawaii using enterococci concentrations and δ(15)N Ulva fasciata macroalgal bioassays to assess relationships with the coral disease Porites lobata growth anomalies (PGAs). PGA severity and enterococci concentrations were high, spatially variable, and positively related. Bioassay algal δ(15)N showed low sewage pollution at the reef edge while high values of resident algae indicated sewage pollution nearshore. Neither δ(15)N metric predicted PGA measures, though bioassay δ(15)N was negatively related to coral cover. Furthermore, PGA prevalence was much higher than previously recorded in Hawaii and the greater Indo-Pacific, highlighting Puako as an area of concern. Although further work is needed to resolve the relationship between sewage pollution and coral cover and disease, these results implicate sewage pollution as a contributor to diminished reef health.
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Affiliation(s)
- Reyn M Yoshioka
- Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY 14853, USA.
| | - Catherine J S Kim
- Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY 14853, USA
| | - Allison M Tracy
- Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY 14853, USA
| | - Rebecca Most
- The Nature Conservancy, 923 Nuuanu Ave., Honolulu, HI 96817, USA
| | - C Drew Harvell
- Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY 14853, USA
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28
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Burge CA, Friedman CS, Getchell R, House M, Lafferty KD, Mydlarz LD, Prager KC, Sutherland KP, Renault T, Kiryu I, Vega-Thurber R. Complementary approaches to diagnosing marine diseases: a union of the modern and the classic. Philos Trans R Soc Lond B Biol Sci 2016; 371:20150207. [PMID: 26880839 PMCID: PMC4760137 DOI: 10.1098/rstb.2015.0207] [Citation(s) in RCA: 35] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/21/2015] [Indexed: 01/01/2023] Open
Abstract
Linking marine epizootics to a specific aetiology is notoriously difficult. Recent diagnostic successes show that marine disease diagnosis requires both modern, cutting-edge technology (e.g. metagenomics, quantitative real-time PCR) and more classic methods (e.g. transect surveys, histopathology and cell culture). Here, we discuss how this combination of traditional and modern approaches is necessary for rapid and accurate identification of marine diseases, and emphasize how sole reliance on any one technology or technique may lead disease investigations astray. We present diagnostic approaches at different scales, from the macro (environment, community, population and organismal scales) to the micro (tissue, organ, cell and genomic scales). We use disease case studies from a broad range of taxa to illustrate diagnostic successes from combining traditional and modern diagnostic methods. Finally, we recognize the need for increased capacity of centralized databases, networks, data repositories and contingency plans for diagnosis and management of marine disease.
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Affiliation(s)
- Colleen A Burge
- Institute of Marine and Environmental Technology, University of Maryland Baltimore County, 701 E Pratt Street, Baltimore, MD 21202, USA
| | - Carolyn S Friedman
- School of Aquatic and Fishery Sciences, University of Washington, Box 355020, Seattle, WA 98195, USA
| | - Rodman Getchell
- Department of Microbiology and Immunology, C4-177 Vet Med Center, College of Veterinary Medicine, Cornell University, 930 Campus Road, Ithaca, NY 14853, USA
| | - Marcia House
- Northwest Indian Fisheries Commission, 6730 Martin Way East, Olympia, WA 98516, USA
| | - Kevin D Lafferty
- US Geological Survey, Western Ecological Research Center, c/o Marine Science Institute, University of California, Santa Barbara, CA 93106, USA
| | - Laura D Mydlarz
- Department of Biology, University of Texas Arlington, 501 South Nedderman, Arlington, TX 76019, USA
| | - Katherine C Prager
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA 90095, USA Fogarty International Center, National Institutes of Health, Bethesda, MD 20892, USA
| | | | - Tristan Renault
- Ifremer, Département Ressources Biologiques et Environnement, rue de l'Ile d'Yeu, 44311 Nantes Cedex 03, France
| | - Ikunari Kiryu
- National Research Institute of Aquaculture, Fisheries Research Agency, Mie 516-0193, Japan
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29
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Miller J, Sweet MJ, Wood E, Bythell J. Baseline coral disease surveys within three marine parks in Sabah, Borneo. PeerJ 2016; 3:e1391. [PMID: 26732905 PMCID: PMC4699778 DOI: 10.7717/peerj.1391] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2015] [Accepted: 10/16/2015] [Indexed: 11/20/2022] Open
Abstract
Two of the most significant threats to coral reefs worldwide are bleaching and disease. However, there has been a scarcity of research on coral disease in South-East Asia, despite the high biodiversity and the strong dependence of local communities on the reefs in the region. This study provides baseline data on coral disease frequencies within three national parks in Sabah, Borneo, which exhibit different levels of human impacts and management histories. High mean coral cover (55%) and variable disease frequency (mean 0.25 diseased colonies m(-2)) were found across the three sites. Highest disease frequency (0.44 diseased colonies per m(2)) was seen at the site closest to coastal population centres. Bleaching and pigmentation responses were actually higher at Sipadan, the more remote, offshore site, whereas none of the other coral diseases detected in the other two parks were detected in Sipadan. Results of this study offer a baseline dataset of disease in these parks and indicate the need for continued monitoring, and suggest that coral colonies in parks under higher anthropogenic stressors and with lower coral cover may be more susceptible to contracting disease.
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Affiliation(s)
- Jennifer Miller
- School of Biology, Newcastle University , Newcastle upon Tyne , UK
| | - Michael J Sweet
- School of Biology, Newcastle University , Newcastle upon Tyne , UK
| | - Elizabeth Wood
- Marine Conservation Society, Ross-On-Wye, UK; Semporna Islands Darwin Project, Tun Sakaran Marine Park Complex, Malaysia
| | - John Bythell
- School of Biology, Newcastle University , Newcastle upon Tyne , UK
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30
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Wear SL, Thurber RV. Sewage pollution: mitigation is key for coral reef stewardship. Ann N Y Acad Sci 2015; 1355:15-30. [PMID: 25959987 PMCID: PMC4690507 DOI: 10.1111/nyas.12785] [Citation(s) in RCA: 78] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2014] [Revised: 03/21/2015] [Accepted: 04/07/2015] [Indexed: 01/04/2023]
Abstract
Coral reefs are in decline worldwide, and land-derived sources of pollution, including sewage, are a major force driving that deterioration. This review presents evidence that sewage discharge occurs in waters surrounding at least 104 of 112 reef geographies. Studies often refer to sewage as a single stressor. However, we show that it is more accurately characterized as a multiple stressor. Many of the individual agents found within sewage, specifically freshwater, inorganic nutrients, pathogens, endocrine disrupters, suspended solids, sediments, and heavy metals, can severely impair coral growth and/or reproduction. These components of sewage may interact with each other to create as-yet poorly understood synergisms (e.g., nutrients facilitate pathogen growth), and escalate impacts of other, non-sewage–based stressors. Surprisingly few published studies have examined impacts of sewage in the field, but those that have suggest negative effects on coral reefs. Because sewage discharge proximal to sensitive coral reefs is widespread across the tropics, it is imperative for coral reef–focused institutions to increase investment in threat-abatement strategies for mitigating sewage pollution.
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Affiliation(s)
- Stephanie L Wear
- Institute of Marine Sciences, University of North Carolina at Chapel Hill, Morehead City, North Carolina.,The Nature Conservancy, Beaufort, North Carolina
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31
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Systematic Analysis of White Pox Disease in Acropora palmata of the Florida Keys and Role of Serratia marcescens. Appl Environ Microbiol 2015; 81:4451-7. [PMID: 25911491 DOI: 10.1128/aem.00116-15] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2015] [Accepted: 04/20/2015] [Indexed: 12/30/2022] Open
Abstract
White pox disease (WPD) affects the threatened elkhorn coral, Acropora palmata. Owing in part to the lack of a rapid and simple diagnostic test, there have been few systematic assessments of the prevalence of acroporid serratiosis (caused specifically by Serratia marcescens) versus general WPD signs. Six reefs in the Florida Keys were surveyed between 2011 and 2013 to determine the disease status of A. palmata and the prevalence of S. marcescens. WPD was noted at four of the six reefs, with WPD lesions found on 8 to 40% of the colonies surveyed. S. marcescens was detected in 26.9% (7/26) of the WPD lesions and in mucus from apparently healthy colonies both during and outside of disease events (9%; 18/201). S. marcescens was detected with greater frequency in A. palmata than in the overlying water column, regardless of disease status (P = 0.0177). S. marcescens could not be cultured from A. palmata but was isolated from healthy colonies of other coral species and was identified as pathogenic pulsed-field gel electrophoresis type PDR60. WPD lesions were frequently observed on the reef, but unlike in prior outbreaks, no whole-colony death was observed. Pathogenic S. marcescens was circulating on the reef but did not appear to be the primary pathogen in these recent WPD episodes, suggesting that other pathogens or stressors may contribute to signs of WPD. Results highlight the critical importance of diagnostics in coral disease investigations, especially given that field manifestation of disease may be similar, regardless of the etiological agent.
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32
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Campbell AM, Fleisher J, Sinigalliano C, White JR, Lopez JV. Dynamics of marine bacterial community diversity of the coastal waters of the reefs, inlets, and wastewater outfalls of southeast Florida. Microbiologyopen 2015; 4:390-408. [PMID: 25740409 PMCID: PMC4475383 DOI: 10.1002/mbo3.245] [Citation(s) in RCA: 54] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2014] [Revised: 01/09/2015] [Accepted: 01/26/2015] [Indexed: 02/01/2023] Open
Abstract
Coastal waters adjacent to populated southeast Florida possess different habitats (reefs, oceanic inlets, sewage outfalls) that may affect the composition of their inherent microbiomes. To determine variation according to site, season, and depth, over the course of 1 year, we characterized the bacterioplankton communities within 38 nearshore seawater samples derived from the Florida Area Coastal Environment (FACE) water quality survey. Six distinct coastal locales were profiled – the Port Everglades and Hillsboro Inlets, Hollywood and Broward wastewater outfalls, and associated reef sites using culture-independent, high-throughput pyrosequencing of the 16S rRNA V4 region. More than 227,000 sequences helped describe longitudinal taxonomic profiles of marine bacteria and archaea. There were 4447 unique operational taxonomic units (OTUs) identified with a mean OTU count of 5986 OTUs across all sites. Bacterial taxa varied significantly by season and by site using weighted and unweighted Unifrac, but depth was only supported by weighted Unifrac, suggesting a change due to presence/absence of certain OTUs. Abundant microbial taxa across all samples included Synechococcus, Pelagibacteraceae, Bacteroidetes, and various Proteobacteria. Unifrac analysis confirmed significant differences at inlet sites relative to reef and outfalls. Inlet-based bacterioplankton significantly differed in greater abundances of Rhodobacteraceae and Cryomorphaceae, and depletion of SAR406 sequences. This study also found higher counts of Firmicutes, Chloroflexi, and wastewater associated SBR1093 bacteria at the outfall and reef sites compared to inlet sites. This study profiles local bacterioplankton populations in a much broader context, beyond culturing and quantitative PCR, and expands upon the work completed by the National Oceanic and Atmospheric Administration FACE program.
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Affiliation(s)
- Alexandra M Campbell
- Center of Excellence in Coral Reef Ecosystem Research, Nova Southeastern University, Dania Beach, Florida, 33004
| | - Jay Fleisher
- School of Osteopathic Medicine, Nova Southeastern University, 3301 College Avenue, Davie, Florida, 33004
| | - Christopher Sinigalliano
- Atlantic Oceanographic and Meteorological Laboratory, National Oceanic and Atmospheric Administration, Miami, Florida, 33149
| | | | - Jose V Lopez
- Center of Excellence in Coral Reef Ecosystem Research, Nova Southeastern University, Dania Beach, Florida, 33004
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Zhang J, Ormälä-Odegrip AM, Mappes J, Laakso J. Top-down effects of a lytic bacteriophage and protozoa on bacteria in aqueous and biofilm phases. Ecol Evol 2014; 4:4444-53. [PMID: 25512841 PMCID: PMC4264894 DOI: 10.1002/ece3.1302] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2014] [Revised: 06/26/2014] [Accepted: 09/30/2014] [Indexed: 01/09/2023] Open
Abstract
Lytic bacteriophages and protozoan predators are the major causes of bacterial mortality in natural microbial communities, which also makes them potential candidates for biological control of bacterial pathogens. However, little is known about the relative impact of bacteriophages and protozoa on the dynamics of bacterial biomass in aqueous and biofilm phases. Here, we studied the temporal and spatial dynamics of bacterial biomass in a microcosm experiment where opportunistic pathogenic bacteria Serratia marcescens was exposed to particle-feeding ciliates, surface-feeding amoebas, and lytic bacteriophages for 8 weeks, ca. 1300 generations. We found that ciliates were the most efficient enemy type in reducing bacterial biomass in the open water, but least efficient in reducing the biofilm biomass. Biofilm was rather resistant against bacterivores, but amoebae had a significant long-term negative effect on bacterial biomass both in the open-water phase and biofilm. Bacteriophages had only a minor long-term effect on bacterial biomass in open-water and biofilm phases. However, separate short-term experiments with the ancestral bacteriophages and bacteria revealed that bacteriophages crash the bacterial biomass dramatically in the open-water phase within the first 24 h. Thereafter, the bacteria evolve phage-resistance that largely prevents top-down effects. The combination of all three enemy types was most effective in reducing biofilm biomass, whereas in the open-water phase the ciliates dominated the trophic effects. Our results highlight the importance of enemy feeding mode on determining the spatial distribution and abundance of bacterial biomass. Moreover, the enemy type can be crucially important predictor of whether the rapid defense evolution can significantly affect top-down regulation of bacteria.
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Affiliation(s)
- Ji Zhang
- Centre of Excellence in Biological Interactions, Department of Biological and Environmental Science, University of Jyväskylä P.O. Box 35, 40014, Jyväskylä, Finland ; Department of Biosciences, University of Helsinki P.O. Box 65, 00014, Helsinki, Finland
| | - Anni-Maria Ormälä-Odegrip
- Centre of Excellence in Biological Interactions, Department of Biological and Environmental Science, University of Jyväskylä P.O. Box 35, 40014, Jyväskylä, Finland ; Department of Biosciences, University of Helsinki P.O. Box 65, 00014, Helsinki, Finland
| | - Johanna Mappes
- Centre of Excellence in Biological Interactions, Department of Biological and Environmental Science, University of Jyväskylä P.O. Box 35, 40014, Jyväskylä, Finland
| | - Jouni Laakso
- Centre of Excellence in Biological Interactions, Department of Biological and Environmental Science, University of Jyväskylä P.O. Box 35, 40014, Jyväskylä, Finland ; Department of Biosciences, University of Helsinki P.O. Box 65, 00014, Helsinki, Finland
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Muller EM, van Woesik R. Genetic susceptibility, colony size, and water temperature drive white-pox disease on the coral Acropora palmata. PLoS One 2014; 9:e110759. [PMID: 25372835 PMCID: PMC4220941 DOI: 10.1371/journal.pone.0110759] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2014] [Accepted: 09/19/2014] [Indexed: 11/20/2022] Open
Abstract
Outbreaks of coral diseases are one of the greatest threats to reef corals in the Caribbean, yet the mechanisms that lead to coral diseases are still largely unknown. Here we examined the spatial-temporal dynamics of white-pox disease on Acropora palmata coral colonies of known genotypes. We took a Bayesian approach, using Integrated Nested Laplace Approximation algorithms, to examine which covariates influenced the presence of white-pox disease over seven years. We showed that colony size, genetic susceptibility of the coral host, and high-water temperatures were the primary tested variables that were positively associated with the presence of white-pox disease on A. palmata colonies. Our study also showed that neither distance from previously diseased individuals, nor colony location, influenced the dynamics of white-pox disease. These results suggest that white-pox disease was most likely a consequence of anomalously high water temperatures that selectively compromised the oldest colonies and the most susceptible coral genotypes.
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Affiliation(s)
- Erinn M. Muller
- Mote Marine Laboratory, Sarasota, Florida, United States of America
- * E-mail:
| | - Robert van Woesik
- Department of Biological Sciences, Florida Institute of Technology, Melbourne, Florida, United States of America
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Zhang J, Ketola T, Örmälä-Odegrip AM, Mappes J, Laakso J. Coincidental loss of bacterial virulence in multi-enemy microbial communities. PLoS One 2014; 9:e111871. [PMID: 25365586 PMCID: PMC4218854 DOI: 10.1371/journal.pone.0111871] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2014] [Accepted: 10/03/2014] [Indexed: 01/17/2023] Open
Abstract
The coincidental virulence evolution hypothesis suggests that outside-host selection, such as predation, parasitism and resource competition can indirectly affect the virulence of environmentally-growing bacterial pathogens. While there are some examples of coincidental environmental selection for virulence, it is also possible that the resource acquisition and enemy defence is selecting against it. To test these ideas we conducted an evolutionary experiment by exposing the opportunistic pathogen bacterium Serratia marcescens to the particle-feeding ciliate Tetrahymena thermophila, the surface-feeding amoeba Acanthamoeba castellanii, and the lytic bacteriophage Semad11, in all possible combinations in a simulated pond water environment. After 8 weeks the virulence of the 384 evolved clones were quantified with fruit fly Drosophila melanogaster oral infection model, and several other life-history traits were measured. We found that in comparison to ancestor bacteria, evolutionary treatments reduced the virulence in most of the treatments, but this reduction was not clearly related to any changes in other life-history traits. This suggests that virulence traits do not evolve in close relation with these life-history traits, or that different traits might link to virulence in different selective environments, for example via resource allocation trade-offs.
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Affiliation(s)
- Ji Zhang
- Centre of Excellence in Biological Interactions, Department of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland
- Department of Biological and Environmental Science, University of Helsinki, Helsinki, Finland
- * E-mail:
| | - Tarmo Ketola
- Centre of Excellence in Biological Interactions, Department of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland
| | | | - Johanna Mappes
- Centre of Excellence in Biological Interactions, Department of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland
| | - Jouni Laakso
- Centre of Excellence in Biological Interactions, Department of Biological and Environmental Science, University of Jyväskylä, Jyväskylä, Finland
- Department of Biological and Environmental Science, University of Helsinki, Helsinki, Finland
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Randall CJ, Jordan-Garza AG, Muller EM, Van Woesik R. Relationships between the history of thermal stress and the relative risk of diseases of Caribbean corals. Ecology 2014; 95:1981-94. [PMID: 25163129 DOI: 10.1890/13-0774.1] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The putative increase in coral diseases in the Caribbean has led to extensive declines in coral populations. Coral diseases are a consequence of the complex interactions among the coral hosts, the pathogens, and the environment. Yet, the relative influence that each of these components has on the prevalence of coral diseases is unclear. Also unknown is the extent to which historical thermal-stress events have influenced the prevalence of contemporary coral diseases and the potential adjustment of coral populations to thermal stress. We used a Bayesian approach to test the hypothesis that in 2012 the relative risk of four signs of coral disease (white signs, dark spots, black bands, and yellow signs) differed at reef locations with different thermal histories. We undertook an extensive spatial study of coral diseases at four locations in the Caribbean region (10(3) km), two with and two without a history of frequent thermal anomalies (approximately 4-6 years) over the last 143 years (1870-2012). Locations that historically experienced frequent thermal anomalies had a significantly higher risk of corals displaying white signs, and had a lower risk of corals displaying dark spots, than locations that did not historically experience frequent thermal anomalies. By contrast, there was no relationship between the history of thermal stress and the relative risk of corals displaying black bands and yellow signs, at least at the spatial scale of our observations.
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Krediet CJ, Meyer JL, Gimbrone N, Yanong R, Berzins I, Alagely A, Castro H, Ritchie KB, Paul VJ, Teplitski M. Interactions between the tropical sea anemone Aiptasia pallida and Serratia marcescens, an opportunistic pathogen of corals. ENVIRONMENTAL MICROBIOLOGY REPORTS 2014; 6:287-292. [PMID: 24983533 DOI: 10.1111/1758-2229.12151] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/20/2014] [Accepted: 01/29/2014] [Indexed: 06/03/2023]
Abstract
Coral reefs are under increasing stress caused by global and local environmental changes, which are thought to increase the susceptibility of corals to opportunistic pathogens. In the absence of an easily culturable model animal, the understanding of the mechanisms of disease progression in corals remains fairly limited. In the present study, we tested the susceptibility of the tropical sea anemone Aiptasia pallida to an opportunistic coral pathogen (Serratia marcescens). A. pallida was susceptible to S. marcescens PDL100 and responded to this opportunistic coral pathogen with darkening of the tissues and retraction of tentacles, followed by complete disintegration of polyp tissues. Histological observations revealed loss of zooxanthellae and structural changes in eosinophilic granular cells in response to pathogen infection. A screen of S. marcescens mutants identified a motility and tetrathionate reductase mutants as defective in virulence in the A. pallida infection model. In co-infections with the wild-type strain, the tetrathionate reductase mutant was less fit within the surface mucopolysaccharide layer of the host coral Acropora palmata.
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Affiliation(s)
- Cory J Krediet
- Interdisciplinary Ecology Graduate Program, School of Natural Resources and Environment, University of Florida-IFAS, Gainesville, FL, 32610, USA
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Lesser MP, Jarett JK. Culture-dependent and culture-independent analyses reveal no prokaryotic community shifts or recovery ofSerratia marcescensinAcropora palmatawith white pox disease. FEMS Microbiol Ecol 2014; 88:457-67. [DOI: 10.1111/1574-6941.12311] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2013] [Revised: 01/28/2014] [Accepted: 02/24/2014] [Indexed: 12/01/2022] Open
Affiliation(s)
- Michael P. Lesser
- Department of Molecular, Cellular and Biomedical Science; University of New Hampshire; Durham NH USA
| | - Jessica K. Jarett
- Department of Molecular, Cellular and Biomedical Science; University of New Hampshire; Durham NH USA
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Burge CA, Mark Eakin C, Friedman CS, Froelich B, Hershberger PK, Hofmann EE, Petes LE, Prager KC, Weil E, Willis BL, Ford SE, Harvell CD. Climate change influences on marine infectious diseases: implications for management and society. ANNUAL REVIEW OF MARINE SCIENCE 2014; 6:249-77. [PMID: 23808894 DOI: 10.1146/annurev-marine-010213-135029] [Citation(s) in RCA: 262] [Impact Index Per Article: 26.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Infectious diseases are common in marine environments, but the effects of a changing climate on marine pathogens are not well understood. Here we review current knowledge about how the climate drives host-pathogen interactions and infectious disease outbreaks. Climate-related impacts on marine diseases are being documented in corals, shellfish, finfish, and humans; these impacts are less clearly linked for other organisms. Oceans and people are inextricably linked, and marine diseases can both directly and indirectly affect human health, livelihoods, and well-being. We recommend an adaptive management approach to better increase the resilience of ocean systems vulnerable to marine diseases in a changing climate. Land-based management methods of quarantining, culling, and vaccinating are not successful in the ocean; therefore, forecasting conditions that lead to outbreaks and designing tools/approaches to influence these conditions may be the best way to manage marine disease.
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Affiliation(s)
- Colleen A Burge
- Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, New York 14853; , *
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Use of quantitative real-time PCR for direct detection of serratia marcescens in marine and other aquatic environments. Appl Environ Microbiol 2013; 80:1679-83. [PMID: 24375136 DOI: 10.1128/aem.02755-13] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
Abstract
Serratia marcescens is the etiological agent of acroporid serratiosis, a distinct form of white pox disease in the threatened coral Acropora palmata. The pathogen is commonly found in untreated human waste in the Florida Keys, which may contaminate both nearshore and offshore waters. Currently there is no direct method for detection of this bacterium in the aquatic or reef environment, and culture-based techniques may underestimate its abundance in marine waters. A quantitative real-time PCR assay was developed to detect S. marcescens directly from environmental samples, including marine water, coral mucus, sponge tissue, and wastewater. The assay targeted the luxS gene and was able to distinguish S. marcescens from other Serratia species with a reliable quantitative limit of detection of 10 cell equivalents (CE) per reaction. The method could routinely discern the presence of S. marcescens for as few as 3 CE per reaction, but it could not be reliably quantified at this level. The assay detected environmental S. marcescens in complex sewage influent samples at up to 761 CE ml(-1) and in septic system-impacted residential canals in the Florida Keys at up to 4.1 CE ml(-1). This detection assay provided rapid quantitative abilities and good sensitivity and specificity, which should offer an important tool for monitoring this ubiquitous pathogen that can potentially impact both human health and coral health.
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Easson CG, Slattery M, Momm HG, Olson JB, Thacker RW, Gochfeld DJ. Exploring individual- to population-level impacts of disease on coral reef sponges: using spatial analysis to assess the fate, dynamics, and transmission of Aplysina Red Band Syndrome (ARBS). PLoS One 2013; 8:e79976. [PMID: 24244583 PMCID: PMC3828202 DOI: 10.1371/journal.pone.0079976] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2013] [Accepted: 10/07/2013] [Indexed: 11/18/2022] Open
Abstract
Background Marine diseases are of increasing concern for coral reef ecosystems, but often their causes, dynamics and impacts are unknown. The current study investigated the epidemiology of Aplysina Red Band Syndrome (ARBS), a disease affecting the Caribbean sponge Aplysina cauliformis, at both the individual and population levels. The fates of marked healthy and ARBS-infected sponges were examined over the course of a year. Population-level impacts and transmission mechanisms of ARBS were investigated by monitoring two populations of A. cauliformis over a three year period using digital photography and diver-collected data, and analyzing these data with GIS techniques of spatial analysis. In this study, three commonly used spatial statistics (Ripley’s K, Getis-Ord General G, and Moran’s Index) were compared to each other and with direct measurements of individual interactions using join-counts, to determine the ideal method for investigating disease dynamics and transmission mechanisms in this system. During the study period, Hurricane Irene directly impacted these populations, providing an opportunity to assess potential storm effects on A. cauliformis and ARBS. Results Infection with ARBS caused increased loss of healthy sponge tissue over time and a higher likelihood of individual mortality. Hurricane Irene had a dramatic effect on A. cauliformis populations by greatly reducing sponge biomass on the reef, especially among diseased individuals. Spatial analysis showed that direct contact between A. cauliformis individuals was the likely transmission mechanism for ARBS within a population, evidenced by a significantly higher number of contact-joins between diseased sponges compared to random. Of the spatial statistics compared, the Moran’s Index best represented true connections between diseased sponges in the survey area. This study showed that spatial analysis can be a powerful tool for investigating disease dynamics and transmission in a coral reef ecosystem.
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Affiliation(s)
- Cole G. Easson
- Environmental Toxicology Research Program, University of Mississippi, University, Mississippi, United States of America
- * E-mail:
| | - Marc Slattery
- Environmental Toxicology Research Program, University of Mississippi, University, Mississippi, United States of America
- National Center for Natural Products Research, University of Mississippi, University, Mississippi, United States of America
- Department of Pharmacognosy, University of Mississippi, University, Mississippi, United States of America
| | - Henrique G. Momm
- Department of Geosciences, Middle Tennessee State University, Murfreesboro, Tennessee, United States of America
| | - Julie B. Olson
- Department of Biological Sciences, University of Alabama, Tuscaloosa, Alabama, United States of America
| | - Robert W. Thacker
- Department of Biology, University of Alabama at Birmingham, Birmingham, Alabama, United States of America
| | - Deborah J. Gochfeld
- Environmental Toxicology Research Program, University of Mississippi, University, Mississippi, United States of America
- National Center for Natural Products Research, University of Mississippi, University, Mississippi, United States of America
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Camus A, Berliner A, Clauss T, Hatcher N, Marancik D. Serratia marcescens associated ampullary system infection and septicaemia in a bonnethead shark, Sphyrna tiburo (L.). JOURNAL OF FISH DISEASES 2013; 36:891-895. [PMID: 23534484 DOI: 10.1111/jfd.12107] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/18/2012] [Revised: 02/11/2013] [Accepted: 02/15/2013] [Indexed: 06/02/2023]
Affiliation(s)
- A Camus
- Department of Pathology, College of Veterinary Medicine, University of Georgia, Athens, GA, USA
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Petersen LM, Tisa LS. Friend or foe? A review of the mechanisms that driveSerratiatowards diverse lifestyles. Can J Microbiol 2013; 59:627-40. [DOI: 10.1139/cjm-2013-0343] [Citation(s) in RCA: 78] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Found widespread around the globe, Serratia are Gram-negative bacteria capable of thriving in a diverse number of environments that include water, soil, and the digestive tracts of various animals. Known for their ability to produce a myriad of extracellular enzymes, these bacteria also produce various secondary metabolites that directly contribute to their survival. While the effects Serratia species have on other organisms range from parasitic to symbiotic, what these bacteria have in common is their ability to resist attack, respond appropriately to environmental conditions, and outcompete other microorganisms when colonizing their respective niche. This review highlights the mechanisms utilized by Serratia species that drive their ubiquitous nature, with emphasis on the latest findings. Also discussed is how secreted compounds drive these bacteria towards pathogenic, mutualistic, and antagonistic associations.
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Affiliation(s)
- Lauren M. Petersen
- Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, 46 College Road, Durham, NH 03824-2617, USA
| | - Louis S. Tisa
- Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, 46 College Road, Durham, NH 03824-2617, USA
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Culturable heterotrophic bacteria associated with healthy and bleached scleractinian Madracis decactis and the fireworm Hermodice carunculata from the remote St. Peter and St. Paul Archipelago, Brazil. Curr Microbiol 2013; 68:38-46. [PMID: 23979060 DOI: 10.1007/s00284-013-0435-1] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2013] [Accepted: 06/25/2013] [Indexed: 10/26/2022]
Abstract
We report on the first characterization of the culturable heterotrophic bacteria of the scleractinian Madracis decactis. In addition, we characterized the culturable bacteria associated with the fireworm Hermodice carunculata, observed predating partially bleached coral colonies. Our study was carried out in the remote St. Peter and St. Paul Archipelago (SPSPA), Mid-Atlantic Ridge, Brazil. We constituted a 403 isolates collection and subsequently characterized it by means of pyrH and 16S rRNA partial sequences. We identified Photobacterium, Bacillus, and Vibrio species as members of the culturable microbiota of healthy M. decactis. V. campbellii, V. harveyi, V. communis, and V. maritimus were the most commonly found Vibrio species in healthy corals, representing more than 60 % of all vibrio isolates. Most of the vibrios isolated from the fireworm's tissues (n = 143; >90 %) were identified as V. shiloi. However, we did not recover V. shiloi from bleached M. decactis. Instead, we isolated V. communis, a novel Photobacterium species, Bacillus, Kocuria, and Pseudovibrio, suggesting a possible role of other facultative anaerobic bacteria and/or environmental features (such as water quality) in the onset of bleaching in SPSPA's M. decactis.
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Abstract
Irrefutable evidence of coral reef degradation worldwide and increasing pressure from rising seawater temperatures and ocean acidification associated with climate change have led to a focus on reef resilience and a call to “manage” coral reefs for resilience. Ideally, global action to reduce emission of carbon dioxide and other greenhouse gases will be accompanied by local action. Effective management requires reduction of local stressors, identification of the characteristics of resilient reefs, and design of marine protected area networks that include potentially resilient reefs. Future research is needed on how stressors interact, on how climate change will affect corals, fish, and other reef organisms as well as overall biodiversity, and on basic ecological processes such as connectivity. Not all reef species and reefs will respond similarly to local and global stressors. Because reef-building corals and other organisms have some potential to adapt to environmental changes, coral reefs will likely persist in spite of the unprecedented combination of stressors currently affecting them. The biodiversity of coral reefs is the basis for their remarkable beauty and for the benefits they provide to society. The extraordinary complexity of these ecosystems makes it both more difficult to predict their future and more likely they will have a future.
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Affiliation(s)
- Caroline S. Rogers
- US Geological Survey, Southeast Ecological Science Center, Caribbean Field Station, St. John, VI 00830, USA
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46
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Krediet CJ, Carpinone EM, Ritchie KB, Teplitski M. Characterization of the gacA-dependent surface and coral mucus colonization by an opportunistic coral pathogen Serratia marcescens PDL100. FEMS Microbiol Ecol 2013; 84:290-301. [PMID: 23278392 DOI: 10.1111/1574-6941.12064] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2012] [Revised: 11/05/2012] [Accepted: 12/11/2012] [Indexed: 12/22/2022] Open
Abstract
Opportunistic pathogens rely on global regulatory systems to assess the environment and to control virulence and metabolism to overcome host defenses and outcompete host-associated microbiota. In Gammaproteobacteria, GacS/GacA is one such regulatory system. GacA orthologs direct the expression of the csr (rsm) small regulatory RNAs, which through their interaction with the RNA-binding protein CsrA (RsmA), control genes with functions in carbon metabolism, motility, biofilm formation, and virulence. The csrB gene was controlled by gacA in Serratia marcescens PDL100. A disruption of the S. marcescens gacA gene resulted in an increased fitness of the mutant on mucus of the host coral Acropora palmata and its high molecular weight fraction, whereas the mutant was as competitive as the wild type on the low molecular weight fraction of the mucus. Swarming motility and biofilm formation were reduced in the gacA mutant. This indicates a critical role for gacA in the efficient utilization of specific components of coral mucus and establishment within the surface mucopolysaccharide layer. While significantly affecting early colonization behaviors (coral mucus utilization, swarming motility, and biofilm formation), gacA was not required for virulence of S. marcescens PDL100 in either a model polyp Aiptasia pallida or in brine shrimp Artemia nauplii.
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Affiliation(s)
- Cory J Krediet
- Interdisciplinary Ecology, University of Florida-IFAS, Gainesville, FL 32610-3610, USA
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Spatial and species variations in bacterial communities associated with corals from the Red Sea as revealed by pyrosequencing. Appl Environ Microbiol 2012; 78:7173-84. [PMID: 22865078 DOI: 10.1128/aem.01111-12] [Citation(s) in RCA: 77] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023] Open
Abstract
Microbial associations with corals are common and are most likely symbiotic, although their diversity and relationships with environmental factors and host species remain unclear. In this study, we adopted a 16S rRNA gene tag-pyrosequencing technique to investigate the bacterial communities associated with three stony Scleractinea and two soft Octocorallia corals from three locations in the Red Sea. Our results revealed highly diverse bacterial communities in the Red Sea corals, with more than 600 ribotypes detected and up to 1,000 species estimated from a single coral species. Altogether, 21 bacterial phyla were recovered from the corals, of which Gammaproteobacteria was the most dominant group, and Chloroflexi, Chlamydiae, and the candidate phylum WS3 were reported in corals for the first time. The associated bacterial communities varied greatly with location, where environmental conditions differed significantly. Corals from disturbed areas appeared to share more similar bacterial communities, but larger variations in community structures were observed between different coral species from pristine waters. Ordination methods identified salinity and depth as the most influential parameters affecting the abundance of Vibrio, Pseudoalteromonas, Serratia, Stenotrophomonas, Pseudomonas, and Achromobacter in the corals. On the other hand, bacteria such as Chloracidobacterium and Endozoicomonas were more sensitive to the coral species, suggesting that the host species type may be influential in the associated bacterial community, as well. The combined influences of the coral host and environmental factors on the associated microbial communities are discussed. This study represents the first comparative study using tag-pyrosequencing technology to investigate the bacterial communities in Red Sea corals.
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Abstract
Serratia species, in particular Serratia marcescens, are significant human pathogens. S. marcescens has a long and interesting taxonomic, medical experimentation, military experimentation, and human clinical infection history. The organisms in this genus, particularly S. marcescens, were long thought to be nonpathogenic. Because S. marcescens was thought to be a nonpathogen and is usually red pigmented, the U.S. military conducted experiments that attempted to ascertain the spread of this organism released over large areas. In the process, members of both the public and the military were exposed to S. marcescens, and this was uncovered by the press in the 1970s, leading to U.S. congressional hearings. S. marcescens was found to be a certain human pathogen by the mid-1960s. S. marcescens and S. liquefaciens have been isolated as causative agents of numerous outbreaks and opportunistic infections, and the association of these organisms with point sources such as medical devices and various solutions given to hospitalized patients is striking. Serratia species appear to be common environmental organisms, and this helps to explain the large number of nosocomial infections due to these bacteria. Since many nosocomial infections are caused by multiply antibiotic-resistant strains of S. marcescens, this increases the danger to hospitalized patients, and hospital personnel should be vigilant in preventing nosocomial outbreaks due to this organism. S. marcescens, and probably other species in the genus, carries several antibiotic resistance determinants and is also capable of acquiring resistance genes. S. marcescens and S. liquefaciens are usually identified well in the clinical laboratory, but the other species are rare enough that laboratory technologists may not recognize them. 16S rRNA gene sequencing may enable better identification of some of the less common Serratia species.
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Futch JC, Griffin DW, Banks K, Lipp EK. Evaluation of sewage source and fate on southeast Florida coastal reefs. MARINE POLLUTION BULLETIN 2011; 62:2308-2316. [PMID: 21962922 DOI: 10.1016/j.marpolbul.2011.08.046] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2010] [Revised: 08/30/2011] [Accepted: 08/31/2011] [Indexed: 05/31/2023]
Abstract
Water, sponge and coral samples were collected from stations impacted by a variety of pollution sources and screened for human enteric viruses as conservative markers for human sewage. While human enteroviruses and adenoviruses were not detected, noroviruses (NoV; human genogroups I and II) were detected in 31% of samples (especially in sponge tissue). Stations near inlets were the only ones to show multiple sample types positive for NoV. Fecal indicator bacteria and enteric viruses were further evaluated at multiple inlet stations on an outgoing tide. Greatest indicator concentrations and highest prevalence of viruses were found at the mouth of the inlet and offshore in the inlet plume. Results suggest that inlets moving large volumes of water into the coastal zone with tides may be an important source of fecal contaminants. Efforts to reduce run-off or unintended release of water into the Intracoastal Waterway may lower contaminants entering sensitive coastal areas.
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Affiliation(s)
- J Carrie Futch
- The University of Georgia, Department of Environmental Health Science, Athens, GA 30602, USA
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Tamaki H, Zhang R, Angly FE, Nakamura S, Hong PY, Yasunaga T, Kamagata Y, Liu WT. Metagenomic analysis of DNA viruses in a wastewater treatment plant in tropical climate. Environ Microbiol 2011; 14:441-52. [PMID: 22040222 DOI: 10.1111/j.1462-2920.2011.02630.x] [Citation(s) in RCA: 83] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Viruses have been detected in the different stages of wastewater treatment plants (WWTPs) at concentrations of 10(8) -10(10) ml(-1) of virus-like particles (VLPs), 10-1000 times higher than in natural aquatic environments, suggesting that WWTPs can be considered as an important reservoir and source of viruses. This study revealed novel diversity and function with the DNA viral communities in the influent, activated sludge, anaerobic digester, and effluent of a domestic WWTP using metagenomics. WWTP was a very specific environment, with less than 5% of the > 936 000 metagenomic sequences obtained (∼70-119 Mbp per sample) similar to sequences present in other environmental viromes. Many viruses found in the WWTP were novel, resulting in only < 5-20% of the reads being phylogenetically or functionally assigned. DNA metabolism was observed as the most abundant function with DNA methylase detected at levels 4.2-fold higher than other published viromes, while carbohydrate and amino acids metabolisms were 3.7- and 4.2-fold less abundant respectively. These specific aspects of the WWTP community functions are likely due to high biomass concentration, turnover rate and microbial activity in WWTPs, and likely include mechanisms that help viruses increase their infectivity. Among ∼500 genotypes estimated in individual WWTP viromes, > 82% were shared. These data suggested that VLPs of most viral types could be present between 1 and 30 days in the process before they were discharged. Viruses in WWTP and the discharged ones can have potential impacts on the functioning of the wastewater treatment system and on the dynamics of microbial community in the surrounding aquatic environments respectively.
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Affiliation(s)
- Hideyuki Tamaki
- Department of Civil and Environmental Engineering, University of Illinois at Urbana-Champaign, 205 North Mathews Avenue, Urbana, IL 61801, USA
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