No evidence for substantial aerobic methane emission by terrestrial plants: a 13C-labelling approach

Radiation and temperature drive diurnal variation of aerobic methane emissions from Scots pine canopy

Methane emissions from plant foliage may play an important role in the global methane cycle, but their size and the underlying source processes remain poorly understood. Here, we quantify methane fluxes from the shoots of Scots pine trees, a dominant tree species in boreal forests, to identify source processes and environmental drivers, and we evaluate whether these fluxes can be constrained at the ecosystem-level by eddy covariance flux measurements. We show that shoot-level measurements conducted in forest, garden, or greenhouse settings; on mature trees and saplings; manually and with an automated CO2-, temperature-, and water-controlled chamber system; and with multiple methane analyzers all resulted in comparable daytime fluxes (0.144 ± 0.019 to 0.375 ± 0.074 nmol CH4 g-1 foliar d.w. h-1). We further find that these emissions exhibit a pronounced diurnal cycle that closely follows photosynthetically active radiation and is further modulated by temperature. These diurnal patterns indicate that methane production is associated with diurnal cycle of sunlight, indicating that this production is either a byproduct of photosynthesis-associated biochemical reactions (e.g., the methionine cycle) or produced through nonenzymatic photochemical reactions in plant biomass. Moreover, we identified a light-dependent component in stand-level methane fluxes, which showed order-of-magnitude agreement with shoot-level measurements (0.968 ± 0.031 nmol CH4 g-1 h-1) and which provides an upper limit for shoot methane emissions.

Solar radiation drives methane emissions from the shoots of Scots pine

Plants are recognized as sources of aerobically produced methane (CH₄ ), but the seasonality, environmental drivers and significance of CH₄ emissions from the canopies of evergreen boreal trees remain poorly understood. We measured the CH₄ fluxes from the shoots of Pinus sylvestris (Scots pine) and Picea abies (Norway spruce) saplings in a static, non-steady-state chamber setup to investigate if the shoots of boreal conifers are a source of CH₄ during spring. We found that the shoots of Scots pine emitted CH₄ and these emissions correlated with the photosynthetically active radiation. For Norway spruce, the evidence for CH₄ emissions from the shoots was inconclusive. Our study shows that the canopies of evergreen boreal trees are a potential source of CH₄ in the spring and that these emissions are driven by a temperature-by-light interaction effect of solar radiation either directly or indirectly through its effects on tree physiological processes.

Isotopic gas analysis by means of mid-infrared photoacoustic spectroscopy targeting human exhaled air

There is a great need for cost-efficient non-invasive medical diagnostic tools for analyzing humanly exhaled air. Compared to present day methods, photoacoustic spectroscopy (PAS) can provide a compact and portable (bedside), sensitive and inexpensive solution. We demonstrate a novel portable photoacoustic spectroscopic platform for isotopic measurements of methane (CH₄). We identify and discriminate the ¹²CH₄- and ¹³CH₄ isotopologues and determine their mixing ratio. An Allan deviation analysis shows that the noise equivalent concentration for CH₄ is 200 ppt (pmol/mol) at 100 s of integration time, corresponding to a normalized noise equivalent absorption coefficient of 5.1×10^-9Wcm^-1Hz^-1/2, potentially making the PAS sensor a truly disruptive instrument for bedside monitoring using isotope tracers by providing real-time metabolism data to clinical personnel.

Differential effects of environmental stressors on physiological processes and methane emissions in pea (Pisum sativum) plants at various growth stages

Many studies have investigated the effects of one or two environmental factors on methane (CH4) emissions from plants at a single growth stage, but the impact that multiple co-occurring stress factors may have on emissions at different growth stages has rarely been studied. The objective of this study was to examine the effects of temperature, ultraviolet-B (UVB) radiation, and watering regime on CH4 emissions and some relevant physiological characteristics of pea (Pisum sativum L. cv. 237 J Sundance) plants at three growth stages. We grew plants under two temperature regimes (22/18 °C and 28/24 °C; 16 h light/8 h dark), two UVB levels [0 and 5 kJ m-2 d-1] and two watering regimes (well-watered, watering plants to field capacity, and water-stressed, watering plants at wilting point). Measurements were then taken after 10, 20, and 30 days of growth under experimental conditions, following seven days of initial growth under 22/18 °C. Higher temperatures, UVB5, and water stress adversely affected photosynthesis and chlorophyll fluorescence, but increased CH4 emissions, which decreased with increased plant age. Also, interaction of higher temperatures and UVB5 reversed the pattern of CH4 emissions at growth stages, compared to that of other treatments. We conclude that CH4 emission decreases with plant age, and it is affected by stress factors through changes in physiological activities of plants.

Light quality and quantity regulate aerobic methane emissions from plants

Studies have been mounting in support of the finding that plants release aerobic methane (CH₄ ), and that these emissions are increased by both short-term and long-term environmental stress. It remains unknown whether or not they are affected by variation in light quantity and quality, whether emissions change over time, and whether they are influenced by physiological parameters. Light is the primary energy source of plants, and therefore an important regulator of plant growth and development. Both shade-intolerant sunflower and shade-tolerant chrysanthemum were investigated for the release of aerobic CH₄ emissions, using either low or high light intensity, and varying light quality, including control, low or normal red:far-red ratio (R:FR), and low or high levels of blue, to discern the relationship between light and CH₄ emissions. It was found that low levels of light act as an environmental stress, facilitating CH₄ release from both species. R:FR and blue lights increased emissions under low light, but the results varied with species, providing evidence that both light quantity and quality regulate CH₄ emissions. Emission rates of 6.79-41.13 ng g^-1 DW h^-1 and 18.53-180.25 ng g^-1 DW h^-1 were observed for sunflower and chrysanthemum, respectively. Moreover, emissions decreased with age as plants acclimated to environmental conditions. Since effects were similar in both species, there may be a common trend among a number of shade-tolerant and shade-intolerant species. Light quantity and quality are influenced by factors including cloud covering, so it is important to know how plants will be affected in the context of aerobic CH₄ emissions.

Interactive effects of temperature and UVB radiation on methane emissions from different organs of pea plants grown in hydroponic system

There is no information on variation of methane (CH4) emissions from plant organs exposed to multiple environmental factors. We investigated the interactive effects of temperature and ultraviolet-B (UVB) radiation on CH4 emissions from different organs of pea (Pisum sativum L. var. UT234 Lincoln). Plants were grown hydroponically under two temperatures (22/18°C and 28/24°C; 16h day/8h night) and two levels of UVB radiation [0 and 5kJm-2 d-1] in controlled-environment growth chambers for ten days, after two weeks of initial growth under ambient temperatures. Methane emission, dry mass, growth index, electrical conductivity (EC), pectin, total chlorophyll content, gas exchange and flavonoids were measured in the appropriate plant organs - leaf, stem and root. Higher temperatures increased CH4 emissions, leaf mass ratio, and shoot: root mass ratio. Neither temperature nor UVB had significant effects on leaf, stem, root and total dry mass, EC, pectin, total chlorophyll, as well as specific leaf mass. Among plant organs, there were differences in CH4, EC, pectin and total chlorophyll. Methane and EC were highest for the stem and lowest for the leaf; leaf had highest, but stem had lowest, pectin content; total chlorophyll was highest in the leaf but lowest in the root. Higher temperatures decreased leaf flavonoids, net carbon dioxide assimilation, and water use efficiency. Overall, environmental stressors increased aerobic CH4 emission rates, which varied with plant organs.

Emission of methane, carbon monoxide, carbon dioxide and short-chain hydrocarbons from vegetation foliage under ultraviolet irradiation

The original report that plants emit methane (CH4 ) under aerobic conditions caused much debate and controversy. Critics questioned experimental techniques, possible mechanisms for CH4 production and the nature of estimating global emissions. Several studies have now confirmed that aerobic CH4 emissions can be detected from plant foliage but the extent of the phenomenon in plants and the precise mechanisms and precursors involved remain uncertain. In this study, we investigated the role of environmentally realistic levels of ultraviolet (UV) radiation in causing the emission of CH4 and other gases from foliage obtained from a wide variety of plant types. We related our measured emissions to the foliar content of methyl esters and lignin and to the epidermal UV absorbance of the species investigated. Our data demonstrate that the terrestrial vegetation foliage sampled did emit CH4 , with a range in emissions of 0.6-31.8 ng CH4  g(-1) leaf DW h(-1) , which compares favourably with the original reports of experimental work. In addition to CH4 emissions, our data show that carbon monoxide, ethene and propane are also emitted under UV stress but we detected no significant emissions of carbon dioxide or ethane.

Methane and nitrous oxide exchange over a managed hay meadow

The methane (CH4) and nitrous oxide (N2O) exchange of a temperate mountain grassland near Neustift, Austria, was measured during 2010-2012 over a time period of 22 months using the eddy covariance method. Exchange rates of both compounds at the site were low, with 97% of all half-hourly CH4 and N2O fluxes ranging between ±200 and ±50 ng m-2 s-1, respectively. The meadow acted as a sink for both compounds during certain time periods, but was a clear source of CH4 and N2O on an annual timescale. Therefore, both gases contributed to an increase of the global warming potential (GWP), effectively reducing the sink strength in terms of CO2 equivalents of the investigated grassland site. In 2011, our best guess estimate showed a net greenhouse gas (GHG) sink of -32 g CO2 equ. m-2 yr-1 for the meadow, whereby 55% of the CO2 sink strength of -71 g CO2m-2 yr-1 was offset by CH4 (N2O) emissions of 7 (32) g CO2 equ. m-2 yr-1. When all data were pooled, the ancillary parameters explained 27 (42)% of observed CH4 (N2O) flux variability, and up to 62 (76)% on shorter timescales in-between management dates. In the case of N2O fluxes, we found the highest emissions at intermediate soil water contents and at soil temperatures close to 0 or above 14 °C. In comparison to CO2, H2O and energy fluxes, the interpretation of CH4 and N2O exchange was challenging due to footprint heterogeneity regarding their sources and sinks, uncertainties regarding post-processing and quality control. Our results emphasize that CH4 and N2O fluxes over supposedly well-aerated and moderately fertilized soils cannot be neglected when evaluating the GHG impact of temperate managed grasslands.

The influence of plants on atmospheric methane in an agriculture-dominated landscape

The primary objective of this study was to clarify the influence of crop plants on atmospheric methane (CH4) in an agriculture-dominated landscape in the Upper Midwest of the United States. Measurements were carried out at two contrasting scales. At the plant scale, CH4 fluxes from soybean and corn plants were measured with a laser-based plant chamber system. At the landscape scale, the land surface flux was estimated with a modified Bowen ratio technique using measurements made on a tall tower. The chamber data revealed a diurnal pattern for the plant CH4 flux: it was positive (an emission rate of 0.4±0.1 nmol m(-2) s(-1), average of soybean and corn, in reference to the unit ground area) during the day, and negative (an uptake rate of -0.8±0.8 nmol m(-2) s(-1)) during the night. At the landscape scale, the flux was estimated to be 14.8 nmol m(-2) s(-1) at night and highly uncertain during the day, but the available references and the flux estimates from the equilibrium methods suggested that the CH4 flux during the entire observation period was similar to the estimated nighttime flux. Thus, soybean and corn plants have a negligible role in the landscape-scale CH4 budget.

Abiotic methanogenesis from organosulphur compounds under ambient conditions

Methane in the environment is produced by both biotic and abiotic processes. Biomethanation involves the formation of methane by microbes that live in oxygen-free environments. Abiotic methane formation proceeds under conditions at elevated temperature and/or pressure. Here we present a chemical reaction that readily forms methane from organosulphur compounds under highly oxidative conditions at ambient atmospheric pressure and temperature. When using iron(II/III), hydrogen peroxide and ascorbic acid as reagents, S-methyl groups of organosulphur compounds are efficiently converted into methane. In a first step, methyl sulphides are oxidized to the corresponding sulphoxides. In the next step, demethylation of the sulphoxide via homolytic bond cleavage leads to methyl radical formation and finally to methane in high yields. Because sulphoxidation of methyl sulphides is ubiquitous in the environment, this novel chemical route might mimic methane formation in living aerobic organisms.

Aerobic methane emissions from stinkweed (Thlaspi arvense) capsules

Aerobic methane (CH4) emission from plant vegetative parts has been confirmed by many studies. However, the origin of aerobic CH4 from plants and its emission from reproductive parts have not been well documented. We determined the effects of developmental stages (early, mid, late) and incubation conditions (darkness, dim light, bright light) on CH4 emissions from stinkweed (Thlaspi arvense) capsules. We found that CH4 emissions from capsules varied with developmental stage and incubation light. Methane emission was highest for the late harvested capsules and for those incubated under lower (dim) light condition. Our results also showed a significant negative correlation between CH4 emission and capsule moisture content. We conclude that CH4 emissions vary with capsule age and diurnal light environment.

Environmental impacts on the diversity of methane-cycling microbes and their resultant function

Methane is an important anthropogenic greenhouse gas that is produced and consumed in soils by microorganisms responding to micro-environmental conditions. Current estimates show that soil consumption accounts for 5–15% of methane removed from the atmosphere on an annual basis. Recent variability in atmospheric methane concentrations has called into question the reliability of estimates of methane consumption and calls for novel approaches in order to predict future atmospheric methane trends. This review synthesizes the environmental and climatic factors influencing the consumption of methane from the atmosphere by non-wetland, terrestrial soil microorganisms. In particular, we focus on published efforts to connect community composition and diversity of methane-cycling microbial communities to observed rates of methane flux. We find abundant evidence for direct connections between shifts in the methane-cycling microbial community, due to climate and environmental changes, and observed methane flux levels. These responses vary by ecosystem and associated vegetation type. This information will be useful in process-based models of ecosystem methane flux responses to shifts in environmental and climatic parameters.

Biological and Chemical Diversity of Biogenic Volatile Organic Emissions into the Atmosphere

Biogenic volatile organic compounds (BVOC) emitted by terrestrial ecosystems into the atmosphere play an important role in determining atmospheric constituents including the oxidants and aerosols that control air quality and climate. Accurate quantitative estimates of BVOC emissions are needed to understand the processes controlling the earth system and to develop effective air quality and climate management strategies. The large uncertainties associated with BVOC emission estimates must be reduced, but this is challenging due to the large number of compounds and biological sources. The information on the immense biological and chemical diversity of BVOC is reviewed with a focus on observations that have been incorporated into the MEGAN2.1 BVOC emission model. Strategies for improving current BVOC emission modeling approaches by better representations of this diversity are presented. The current gaps in the available data for parameterizing emission models and the priorities for future measurements are discussed.

Methane emissions from wetlands: biogeochemical, microbial, and modeling perspectives from local to global scales

Understanding the dynamics of methane (CH4 ) emissions is of paramount importance because CH4 has 25 times the global warming potential of carbon dioxide (CO2 ) and is currently the second most important anthropogenic greenhouse gas. Wetlands are the single largest natural CH4 source with median emissions from published studies of 164 Tg yr(-1) , which is about a third of total global emissions. We provide a perspective on important new frontiers in obtaining a better understanding of CH4 dynamics in natural systems, with a focus on wetlands. One of the most exciting recent developments in this field is the attempt to integrate the different methodologies and spatial scales of biogeochemistry, molecular microbiology, and modeling, and thus this is a major focus of this review. Our specific objectives are to provide an up-to-date synthesis of estimates of global CH4 emissions from wetlands and other freshwater aquatic ecosystems, briefly summarize major biogeophysical controls over CH4 emissions from wetlands, suggest new frontiers in CH4 biogeochemistry, examine relationships between methanogen community structure and CH4 dynamics in situ, and to review the current generation of CH4 models. We highlight throughout some of the most pressing issues concerning global change and feedbacks on CH4 emissions from natural ecosystems. Major uncertainties in estimating current and future CH4 emissions from natural ecosystems include the following: (i) A number of important controls over CH4 production, consumption, and transport have not been, or are inadequately, incorporated into existing CH4 biogeochemistry models. (ii) Significant errors in regional and global emission estimates are derived from large spatial-scale extrapolations from highly heterogeneous and often poorly mapped wetland complexes. (iii) The limited number of observations of CH4 fluxes and their associated environmental variables loosely constrains the parameterization of process-based biogeochemistry models.

Online, real-time detection of volatile emissions from plant tissue

Trace gas monitoring plays an important role in many areas of life sciences ranging from agrotechnology, microbiology, molecular biology, physiology, and phytopathology. In plants, many processes can be followed by their low-concentration gas emission, for compounds such as ethylene, nitric oxide, ethanol or other volatile organic compounds (VOCs). For this, numerous gas-sensing devices are currently available based on various methods. Among them are the online trace gas detection methods; these have attracted much interest in recent years. Laser-based infrared spectroscopy and proton transfer reaction mass spectrometry are the two most widely used methods, thanks to their high sensitivity at the single part per billion level and their response time of seconds. This paper starts with a short description of each method and presents performances within a wide variety of biological applications. Using these methods, the dynamics of trace gases for ethylene, nitric oxide and other VOCs released by plants under different conditions are recorded and analysed under natural conditions. In this way many hypotheses can be tested, revealing the role of the key elements in signalling and action mechanisms in plants.

Terrestrial plant methane production and emission

In this minireview, we evaluate all experimental work published on the phenomenon of aerobic methane (CH(4) ) generation in terrestrial plants and plant. Clearly, despite much uncertainty and skepticism, we conclude that the phenomenon is true. Four stimulating factors have been observed to induce aerobic plant CH(4) production, i.e. cutting injuries, increasing temperature, ultraviolet radiation and reactive oxygen species. Further, we analyze rates of measured emission of aerobically produced CH(4) in pectin and in plant tissues from different studies and argue that pectin is very far from the sole contributing precursor. In consequence, scaling up of aerobic CH(4) emission needs to take into consideration other potential sources than pectin. Due to the large uncertainties related to effects of stimulating factors, genotypic responses and type of precursors, we conclude that current attempts for upscaling aerobic CH(4) into a global budget is inadequate. Thus it is too early to draw the line under the aerobic methane emission in plants. Future work is needed for establishing the relative contribution of several proven potential CH(4) precursors in plant material.

Release of methane from aerobic soil: an indication of a novel chemical natural process?

Methane (CH(4)) formation under aerobic conditions has been intensely debated, especially since the discovery of CH(4) generation by both dried plant material and living plants. In this study we test the hypothesis that non-microbial CH(4) formation also occurs in soils. All lyophilised soil samples investigated under aerobic conditions released CH(4) at temperatures ranging from 30 to 70°C exceeding that allowing normal enzymatic activity to proceed. No emissions were observed for single mineral soil components such as quartz sand, clay mineral and iron oxide. Methane release rates from the soils investigated were found to increase both with increasing temperature and higher organic carbon content. Addition of water to dried soils increased CH(4) release rates up to 8-fold those observed with the dried material. Our results suggest the existence of a chemical process in soils that produces CH(4) under aerobic conditions, a finding which has not been hitherto reported.

Enhanced formation of methane in plant cell cultures by inhibition of cytochrome c oxidase

The claim of methane (CH₄) formation in plants has caused much controversy and debate within the scientific community over the past 4 years. Here, using both stable isotope and concentration measurements, we demonstrate that CH₄ formation occurs in plant cell cultures that were grown in the dark under sterile conditions. Under non-stress conditions the plant cell cultures produced trace amounts [0.3-0.6 ng g⁻¹ dry weight (DW) h⁻¹] of CH₄ but these could be increased by one to two orders of magnitude (up to 12 ng g⁻¹ DW h⁻¹) when sodium azide, a compound known to disrupt electron transport flow at the cytochrome c oxidase (complex IV) in plant mitochondria, was added to the cell cultures. The addition of other electron transport chain (ETC) inhibitors did not result in significant CH₄ formation indicating that a site-specific disturbance of the ETC at complex IV causes CH₄ formation in plant cells. Our study is an important first step in providing more information on non-microbial CH₄ formation from living plants particularly under abiotic stress conditions that might affect the electron transport flow at the cytochrome c oxidase in plant mitochondria.

Stressed crops emit more methane despite the mitigating effects of elevated carbon dioxide

Recent studies using single environmental variables show that under aerobic conditions terrestrial plants can emit methane (CH4). However, the effects of multiple environmental factors - as components of global climate change - on aerobic CH4 emissions have been little studied. We examined the combined effects of temperature, carbon dioxide (CO2) and watering regime on CH4 emissions from six commonly cultivated crop species: faba bean, sunflower, pea, canola, barley and wheat. Plants were grown from seeds in controlled-environment growth chambers under two temperature regimes (24°C day/20°C night and 30°C day/26°C night), two CO2 concentrations (380 and 760µmolmol-1) and two watering regimes (well watered and water stressed). Plants were grown first under 24/20°C for 1 week from sowing, and then placed under experimental conditions for a further week. After the specified time, plant growth, gas exchange and CH4 emission rates were determined. Our results revealed that higher temperature and water stress significantly enhance CH4 emissions from plants, whereas elevated CO2 had the opposite effect and partially reverses the promotive effects of these factors. We suggest that the despite the mitigating effects of rising atmospheric CO2, CH4 emission may be higher in the face of ongoing global climate change in warmer and drier environments.

A carbon cycle science update since IPCC AR-4

We review important advances in our understanding of the global carbon cycle since the publication of the IPCC AR4. We conclude that: the anthropogenic emissions of CO2 due to fossil fuel burning have increased up through 2008 at a rate near to the high end of the IPCC emission scenarios; there are contradictory analyses whether an increase in atmospheric fraction, that might indicate a declining sink strength of ocean and/or land, exists; methane emissions are increasing, possibly through enhanced natural emission from northern wetland, methane emissions from dry plants are negligible; old-growth forest take up more carbon than expected from ecological equilibrium reasoning; tropical forest also take up more carbon than previously thought, however, for the global budget to balance, this would imply a smaller uptake in the northern forest; the exchange fluxes between the atmosphere and ocean are increasingly better understood and bottom up and observation-based top down estimates are getting closer to each other; the North Atlantic and Southern ocean take up less CO2, but it is unclear whether this is part of the 'natural' decadal scale variability; large-scale fires and droughts, for instance in Amazonia, but also at Northern latitudes, have lead to significant decreases in carbon uptake on annual timescales; the extra uptake of CO2 stimulated by increased N-deposition is, from a greenhouse gas forcing perspective, counterbalanced by the related additional N2O emissions; the amount of carbon stored in permafrost areas appears much (two times) larger than previously thought; preservation of existing marine ecosystems could require a CO2 stabilization as low as 450 ppm; Dynamic Vegetation Models show a wide divergence for future carbon trajectories, uncertainty in the process description, lack of understanding of the CO2 fertilization effect and nitrogen-carbon interaction are major uncertainties.

Global methane emission estimates from ultraviolet irradiation of terrestrial plant foliage

*Several studies have reported in situ methane (CH(4)) emissions from vegetation foliage, but there remains considerable debate about its significance as a global source. Here, we report a study that evaluates the role of ultraviolet (UV) radiation-driven CH(4) emissions from foliar pectin as a global CH(4) source. *We combine a relationship for spectrally weighted CH(4) production from pectin with a global UV irradiation climatology model, satellite-derived leaf area index (LAI) and air temperature data to estimate the potential global CH(4) emissions from vegetation foliage. *Our results suggest that global foliar CH(4) emissions from UV-irradiated pectin could account for 0.2-1.0 Tg yr(-1), of which 60% is from tropical latitudes, corresponding to < 0.2% of total CH(4) sources. *Our estimate is one to two orders of magnitude lower than previous estimates of global foliar CH(4) emissions. Recent studies have reported that pectin is not the only molecular source of UV-driven CH(4) emissions and that other environmental stresses may also generate CH(4). Consequently, further evaluation of such mechanisms of CH(4) generation is needed to confirm the contribution of foliage to the global CH(4) budget.

Methane formation by oxidation of ascorbic acid using iron minerals and hydrogen peroxide

The possibility of methane formation in an oxidative environment has been intensely debated, especially since the discovery of methane generation by living plants. However, recent studies with animal tissue suggested that under specific conditions aerobic methane formation is also possible. Here, we investigated the generation of methane in an abiotic model system using bioavailable substances. We show formation of methane in a highly oxidative media, using ascorbic acid, ferrihydrite and hydrogen peroxide as reagents. Methane production was shown to be related to reagent ratio, reaction volume and pH. A 2:1 ratio of hydrogen peroxide to ascorbic acid, catalytic amounts of ferrihydrite and acidic conditions (pH 3) enhanced formation of methane. We further show that gaseous oxygen has a strong influence with higher levels found to inhibit methane formation. This study is a first step towards providing an insight for the reaction mechanism of methane formation that would be applicable to aerobic environments.

Abiotic stresses and induced BVOCs

Plants produce a wide spectrum of biogenic volatile organic compounds (BVOCs) in various tissues above and below ground to communicate with other plants and organisms. However, BVOCs also have various functions in biotic and abiotic stresses. For example abiotic stresses enhance BVOCs emission rates and patterns, altering the communication with other organisms and the photochemical cycles. Recent new insights on biosynthesis and eco-physiological control of constitutive or induced BVOCs have led to formulation of hypotheses on their functions which are presented in this review. Specifically, oxidative and thermal stresses are relieved in the presence of volatile terpenes. Terpenes, C6 compounds, and methyl salicylate are thought to promote direct and indirect defence by modulating the signalling that biochemically activate defence pathways.

Effects of temperature, ultraviolet radiation and pectin methyl esterase on aerobic methane release from plant material

This study examines the effects of different irradiance types on aerobic methane (CH(4)) efflux rates from terrestrial plant material. Furthermore, the role of the enzyme pectin methyl esterase (PME) on CH(4) efflux potential was also examined. Different types of plant tissue and purified pectin were incubated in glass vials with different combinations of irradiation and/or temperature. Purified dry pectin was incubated in solution, and with or without PME. Before and after incubation, the concentration of CH(4) was measured with a gas chromatograph. Rates of CH(4) emission were found to depend exponentially on temperature and linearly on UV-B irradiance. UV-B had a greater stimulating effect than UV-A, while visible light had no effect on emission rates. PME was found to substantially reduce the potential for aerobic CH(4) emissions upon demethylation of pectin.

The global methane cycle: recent advances in understanding the microbial processes involved

The global budget of atmospheric CH4 , which is on the order of 500-600 Tg CH4 per year, is mainly the result of environmental microbial processes, such as archaeal methanogenesis in wetlands, rice fields, ruminant and termite digestive systems and of microbial methane oxidation under anoxic and oxic conditions. This review highlights recent progress in the research of anaerobic CH4 oxidation, of CH4 production in the plant rhizosphere, of CH4 serving as substrate for the aquatic trophic food chain and the discovery of novel aerobic methanotrophs. It also emphasizes progress and deficiencies in our knowledge of microbial utilization of low atmospheric CH4 concentrations in soil, CH4 production in the plant canopy, intestinal methanogenesis and CH4 production in pelagic water.

Methane emissions from six crop species exposed to three components of global climate change: temperature, ultraviolet-B radiation and water stress

We examined the effects of temperature, ultraviolet-B (UVB) radiation and watering regime on aerobic methane (CH(4)) emission from six crops-faba bean, sunflower, pea, canola, barley and wheat. Plants were grown in controlled-environment growth chambers under two temperature regimes (24/20 and 30/26 degrees C), three levels of UVB radiation [0 (zero), 5 (ambient) and 10 (enhanced) kJ m(-2) d(-1)] and two watering regimes (well watered and water stressed). A gas chromatograph with a flame ionization detector was used to measure CH(4) emission rates [ng g(-1) dry weight (DW) h(-1)] from detached fresh leaves of each species and attached leaves of pea plants. Plant growth [stem height, leaf area (LA) and aboveground dry matter (AG biomass)] and gas exchange [net CO(2) assimilation (A(N)), transpiration (E) and water use efficiency (WUE)] were also determined. We found that higher temperature, water stress and UVB radiation at the zero and enhanced levels significantly enhanced CH(4) emissions. Crop species varied in CH(4) emission, which was highest for pea and lowest for barley. Higher temperature and water stress reduced all growth parameters, whereas ambient and enhanced UVB decreased stem height but increased LA and AG biomass. Higher temperature decreased A(N) and WUE but increased E, whereas water stress decreased A(N) but increased E and WUE. Zero and enhanced UVB reduced A(N) and E. Growth and gas exchange varied with species. Overall, CH(4) emission was negatively correlated with stem height and AG biomass. We conclude that CH(4) emissions may increase under climatic stress conditions and this extra source might contribute to the 'greenhouse effect'.

Nonmicrobial aerobic methane emission from poplar shoot cultures under low-light conditions

The aerobic formation of methane in plants has been reported previously, but has been questioned by a number of researchers. Recently, isotopic evidence demonstrated that ultraviolet irradiation and heating lead to photochemical or thermal aerobic methane formation mainly from plant pectin in the absence of microbial methane production. However, the origin of aerobic methane formation from plant material observed under low temperature and low-light/dark conditions is still unclear. Here we show that Grey poplar (Populus × canescens, syn. Populus tremula × Populus alba) plants derived from cell cultures under sterile conditions released 13C-labeled methane under low-light conditions after feeding the plants with 13CO2. Molecular biological analysis proved the absence of any microbial contamination with known methanogenic microorganisms and ruled out the possibility that methane emission from our poplar shoot cultures under aerobic low-light/dark and ambient temperature conditions could be of microbial origin. The CH4 release rates in our experiment were in the range of 0.16-0.7 ng g-1 DW h-1, adding evidence to the growing opinion that the quantitative role of aerobic methane emissions from plants in the global methane budget, at least from cold temperate or boreal regions, is only of minor importance.

Methane emission by plant communities in an alpine meadow on the Qinghai-Tibetan Plateau: a new experimental study of alpine meadows and oat pasture

Recently, plant-derived methane (CH(4)) emission has been questioned because limited evidence of the chemical mechanism has been identified to account for the process. We conducted an experiment with four treatments (i.e. winter-grazed, natural alpine meadow; naturally restored alpine meadow eight years after cultivation; oat pasture and bare soil without roots) during the growing seasons of 2007 and 2008 to examine the question of CH(4) emission by plant communities in the alpine meadow. Each treatment consumed CH(4) in closed, opaque chambers in the field, but two types of alpine meadow vegetation reduced CH(4) consumption compared with bare soil, whereas oat pasture increased consumption. This result could imply that meadow vegetation produces CH(4). However, measurements of soil temperature and water content showed significant differences between vegetated and bare soil and appeared to explain differences in CH(4) production between treatments. Our study strongly suggests that the apparent CH(4) production by vegetation, when compared with bare soil in some previous studies, might represent differences in soil temperature and water-filled pore space and not the true vegetation sources of CH(4).

Environmental effects of ozone depletion and its interactions with climate change: progress report, 2008

After the enthusiastic celebration of the 20th Anniversary of the Montreal Protocol on Substances that Deplete the Ozone Layer in 2007, the work for the protection of the ozone layer continues. The Environmental Effects Assessment Panel is one of the three expert panels within the Montreal Protocol. This EEAP deals with the increase of the UV irradiance on the Earth's surface and its effects on human health, animals, plants, biogeochemistry, air quality and materials. For the past few years, interactions of ozone depletion with climate change have also been considered. It has become clear that the environmental problems will be long-lasting. In spite of the fact that the worldwide production of ozone depleting chemicals has already been reduced by 95%, the environmental disturbances are expected to persist for about the next half a century, even if the protective work is actively continued, and completed. The latest full report was published in Photochem. Photobiol. Sci., 2007, 6, 201-332, and the last progress report in Photochem. Photobiol. Sci., 2008, 7, 15-27. The next full report on environmental effects is scheduled for the year 2010. The present progress report 2008 is one of the short interim reports, appearing annually.

Methane emissions by alpine plant communities in the Qinghai-Tibet Plateau

For the first time to our knowledge, we report here methane emissions by plant communities in alpine ecosystems in the Qinghai-Tibet Plateau. This has been achieved through long-term field observations from June 2003 to July 2006 using a closed chamber technique. Strong methane emission at the rate of 26.2+/-1.2 and 7.8+/-1.1microg CH4 m-2h-1 was observed for a grass community in a Kobresia humilis meadow and a Potentilla fruticosa meadow, respectively. A shrub community in the Potentilla meadow consumed atmospheric methane at the rate of 5.8+/-1.3microg CH4 m-2h-1 on a regional basis; plants from alpine meadows contribute at least 0.13Tg CH4 yr-1 in the Tibetan Plateau. This finding has important implications with regard to the regional methane budget and species-level difference should be considered when assessing methane emissions by plants.

Emission of methane from plants

It has been proposed that plants are capable of producing methane by a novel and unidentified biochemical pathway. Emission of methane with an apparently biological origin was recorded from both whole plants and detached leaves. This was the first report of methanogenesis in an aerobic setting, and was estimated to account for 10-45 per cent of the global methane source. Here, we show that plants do not contain a known biochemical pathway to synthesize methane. However, under high UV stress conditions, there may be spontaneous breakdown of plant material, which releases methane. In addition, plants take up and transpire water containing dissolved methane, leading to the observation that methane is released. Together with a new analysis of global methane levels from satellite retrievals, we conclude that plants are not a major source of the global methane production.

The role of ultraviolet radiation, photosensitizers, reactive oxygen species and ester groups in mechanisms of methane formation from pectin

Ultraviolet (UV) radiation has recently been demonstrated to drive an aerobic production of methane (CH(4)) from plant tissues and pectins, as do agents that generate reactive oxygen species (ROS) in vivo independently of UV. As the major building-blocks of pectin do not absorb solar UV found at the earth's surface (i.e. >280 nm), we explored the hypothesis that UV radiation affects pectin indirectly via generation of ROS which themselves release CH(4) from pectin. Decreasing the UV absorbance of commercial pectin by ethanol washing diminished UV-dependent CH(4) production, and this was restored by the addition of the UV photosensitizer tryptophan. Certain ROS scavengers [mannitol, a hydroxyl radical ((*)OH) scavenger; 1,4-diazabicyclo[2.2.2] octane; and iodide] strongly inhibited UV-induced CH(4) production from dry pectin. Furthermore, pectin solutions emitted CH(4) in darkness upon the addition of (*)OH, but not superoxide or H(2)O(2). Model carbohydrates reacted similarly if they possessed -CH(3) groups [e.g. methyl esters or (more weakly) acetyl esters but not rhamnose]. We conclude that UV evokes CH(4) production from pectic methyl groups by interacting with UV photosensitizers to generate (*)OH. We suggest that diverse processes generating (*)OH could contribute to CH(4) emissions independently of UV irradiation, and that environmental stresses and constitutive physiological processes generating ROS require careful evaluation in studies of CH(4) formation from foliage.

Laser-based systems for trace gas detection in life sciences

Infrared gas phase spectroscopy is becoming very common in many life science applications. Here we present three types of trace gas detection systems based on CO2 laser and continuous wave (cw) optical parametric oscillator (OPO) in combination with photoacoustic spectroscopy and cw quantum cascade laser (QCL) in combination with wavelength modulation spectroscopy. Examples are included to illustrate the suitability of CO2 laser system to monitor in real time ethylene emission from various dynamic processes in plants and microorganisms as well as from car exhausts. The versatility of an OPO-based detector is demonstrated by simultaneous detection of 13C-methane and 12C-methane (at 3240 nm) at similar detection limits of 0.1 parts per billion by volume. Recent progress on a QCL-based spectrometer using a continuous wave QCL (output power 25 mW, tuning range of 1891–1908 cm-1) is presented and a comparison is made to a standard chemiluminescence instrument for analysis of NO in exhaled breath.

Ultraviolet radiation drives methane emissions from terrestrial plant pectins

Recent studies demonstrating an in situ formation of methane (CH(4)) within foliage and separate observations that soil-derived CH(4) can be released from the stems of trees have continued the debate about the role of vegetation in CH(4) emissions to the atmosphere. Here, a study of the role of ultraviolet (UV) radiation in the formation of CH(4) and other trace gases from plant pectins in vitro and from leaves of tobacco (Nicotiana tabacum) in planta is reported. Plant pectins were investigated for CH(4 )production under UV irradiation before and after de-methylesterification and with and without the singlet oxygen scavenger 1,4-diazabicyclo[2.2.2]octane (DABCO). Leaves of tobacco were also investigated under UV irradiation and following leaf infiltration with the singlet oxygen generator rose bengal or the bacterial pathogen Pseudomonas syringae. Results demonstrated production of CH(4), ethane and ethylene from pectins and from tobacco leaves following all treatments, that methyl-ester groups of pectin are a source of CH(4), and that reactive oxygen species (ROS) arising from environmental stresses have a potential role in mechanisms of CH(4) formation. Rates of CH(4 )production were lower than those previously reported for intact plants in sunlight but the results clearly show that foliage can emit CH(4) under aerobic conditions.

Methoxyl groups of plant pectin as a precursor of atmospheric methane: evidence from deuterium labelling studies

* The observation that plants produce methane (CH4) under aerobic conditions has caused considerable controversy among the scientific community and the general public. It led to much discussion and debate not only about its contribution to the global CH4 budget but also about the authenticity of the observation itself. Previous results suggested that methoxyl groups of the abundant plant structural component pectin might play a key role in the in situ formation process of CH4. Here, this effect is investigated using an isotope labelling study. * Polysaccharides, pectin and polygalacturonic acid, with varying degrees of trideuterium-labelled methyl groups in the methoxyl moieties, were investigated for CH4 formation under UV irradiation and heating. * A strong deuterium signal in the emitted CH4 was observed from these labelled polysaccharides. * Results clearly demonstrate that ester methyl groups of pectin can serve as a precursor of CH4, supporting the idea of a novel chemical route of CH4 formation in plants under oxic environmental conditions.

Aerobic methane emission from plants in the Inner Mongolia steppe

Traditionally, methane (CH4) emission from terrestrial plants is thought to originate from belowground microbial metabolism under anaerobic conditions, with subsequent transport to the atmosphere through stems. However, a recent study reported aerobic CH4 emission from plants by an unrecognized process, a result that has since been questioned. We investigated CH4 emissions under aerobic conditions from aboveground tissues of 44 species indigenous to the temperate Inner Mongolia steppe. Ten herbaceous hydrophytes (wetland-adapted plants) were examined, two of which--Glyceria spiculosa and Scirpus yagara--emitted CH4 from stems but not from detached leaves. Of 34 xerophytes (arid-adapted plants) examined, 7 out of 9 shrub species emitted CH4 from detached leaves but not stems, whereas none of 25 herbaceous xerophytes emitted CH4. The herbaceous hydrophyte, S. yagara, emitted highly 13C-depleted CH4, suggesting a microbial origin. Achillea frigida exhibited the highest CH4 emission rates among the shrubs and continuously emitted relatively 13C-enriched CH4 from detached leaves, indicating that CH4 was derived directly from plant tissues under aerobic conditions. Because woody species are relatively rare in the Inner Mongolia steppe, aerobic, plant-derived CH4 emission is probably negligible in this region. Our results may imply a larger role for aerobic CH4 production in upland ecosystems dominated by woody species or in ecosystems where woody encroachment is occurring as a result of global change.