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Langille BL, Kess T, Brachmann M, Nugent CM, Messmer A, Duffy SJ, Holborn MK, Van Wyngaarden M, Knutsen TM, Kent M, Boyce D, Gregory RS, Gauthier J, Fairchild EA, Pietrak M, Eddy S, de Leaniz CG, Consuegra S, Whittaker B, Bentzen P, Bradbury IR. Fine-scale environmentally associated spatial structure of lumpfish ( Cyclopterus lumpus) across the Northwest Atlantic. Evol Appl 2023; 16:1619-1636. [PMID: 37752959 PMCID: PMC10519416 DOI: 10.1111/eva.13590] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2023] [Revised: 07/10/2023] [Accepted: 08/14/2023] [Indexed: 09/28/2023] Open
Abstract
Lumpfish, Cyclopterus lumpus, have historically been harvested throughout Atlantic Canada and are increasingly in demand as a solution to controlling sea lice in Atlantic salmon farms-a process which involves both the domestication and the transfer of lumpfish between geographic regions. At present, little is known regarding population structure and diversity of wild lumpfish in Atlantic Canada, limiting attempts to assess the potential impacts of escaped lumpfish individuals from salmon pens on currently at-risk wild populations. Here, we characterize the spatial population structure and genomic-environmental associations of wild populations of lumpfish throughout the Northwest Atlantic using both 70K SNP array data and whole-genome re-sequencing data (WGS). At broad spatial scales, our results reveal a large environmentally associated genetic break between the southern populations (Gulf of Maine and Bay of Fundy) and northern populations (Newfoundland and the Gulf of St. Lawrence), linked to variation in ocean temperature and ice cover. At finer spatial scales, evidence of population structure was also evident in a distinct coastal group in Newfoundland and significant isolation by distance across the northern region. Both evidence of consistent environmental associations and elevated genome-wide variation in F ST values among these three regional groups supports their biological relevance. This study represents the first extensive description of population structure of lumpfish in Atlantic Canada, revealing evidence of broad and fine geographic scale environmentally associated genomic diversity. Our results will facilitate the commercial use of lumpfish as a cleaner fish in Atlantic salmon aquaculture, the identification of lumpfish escapees, and the delineation of conservation units of this at-risk species throughout Atlantic Canada.
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Affiliation(s)
- Barbara L. Langille
- Northwest Atlantic Fisheries Centre, Fisheries and Oceans CanadaSt. John'sNewfoundland and LabradorCanada
| | - Tony Kess
- Northwest Atlantic Fisheries Centre, Fisheries and Oceans CanadaSt. John'sNewfoundland and LabradorCanada
| | - Matthew Brachmann
- Northwest Atlantic Fisheries Centre, Fisheries and Oceans CanadaSt. John'sNewfoundland and LabradorCanada
| | - Cameron M. Nugent
- Northwest Atlantic Fisheries Centre, Fisheries and Oceans CanadaSt. John'sNewfoundland and LabradorCanada
| | - Amber Messmer
- Northwest Atlantic Fisheries Centre, Fisheries and Oceans CanadaSt. John'sNewfoundland and LabradorCanada
| | - Steven J. Duffy
- Northwest Atlantic Fisheries Centre, Fisheries and Oceans CanadaSt. John'sNewfoundland and LabradorCanada
| | - Melissa K. Holborn
- Northwest Atlantic Fisheries Centre, Fisheries and Oceans CanadaSt. John'sNewfoundland and LabradorCanada
| | - Mallory Van Wyngaarden
- Northwest Atlantic Fisheries Centre, Fisheries and Oceans CanadaSt. John'sNewfoundland and LabradorCanada
| | | | - Matthew Kent
- Department of Animal and Aquacultural Sciences, Faculty of Biosciences, Centre for Integrative GeneticsNorwegian University of Life SciencesÅsNorway
| | - Danny Boyce
- Department of Ocean Sciences, Ocean Sciences CentreMemorial University of NewfoundlandSt John'sNewfoundland and LabradorCanada
| | - Robert S. Gregory
- Northwest Atlantic Fisheries Centre, Fisheries and Oceans CanadaSt. John'sNewfoundland and LabradorCanada
| | - Johanne Gauthier
- Maurice Lamontagne Institute, Fisheries and Oceans CanadaQuebecCanada
| | | | - Michael Pietrak
- USDA, Agricultural Research ServiceNational Cold Water Marine Aquaculture CenterFranklinMaineUSA
| | - Stephen Eddy
- University of Maine Center for Cooperative Aquaculture ResearchFranklinMaineUSA
| | | | - Sofia Consuegra
- Centre for Sustainable Aquatic Research, Swansea UniversitySwanseaUK
| | - Ben Whittaker
- Centre for Sustainable Aquatic Research, Swansea UniversitySwanseaUK
| | - Paul Bentzen
- Marine Gene Probe Laboratory, Department of BiologyDalhousie UniversityHalifaxNova ScotiaCanada
| | - Ian R. Bradbury
- Northwest Atlantic Fisheries Centre, Fisheries and Oceans CanadaSt. John'sNewfoundland and LabradorCanada
- Marine Gene Probe Laboratory, Department of BiologyDalhousie UniversityHalifaxNova ScotiaCanada
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Timi JT, Buchmann K. A century of parasitology in fisheries and aquaculture. J Helminthol 2023; 97:e4. [PMID: 36631485 DOI: 10.1017/S0022149X22000797] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
Fish parasitological research associated with fisheries and aquaculture has expanded remarkably over the past century. The application of parasites as biological tags has been one of the fields in which fish parasitology has generated new insight into fish migration and stock assessments worldwide. It is a well-established discipline whose methodological issues are regularly reviewed and updated. Therefore, no concepts or case-studies will be repeated here; instead, we summarize some of the main recent findings and achievements of this methodology. These include the extension of its use in hosts other than bony fishes; the improvements in the selection of parasite tags; the recognition of the host traits affecting the use of parasite tags; and the increasingly recognized need for integrative, multidisciplinary studies combining parasites with classical methods and modern techniques, such as otolith microchemistry and genetics. Archaeological evidence points to the existence of parasitic problems associated with aquaculture activities more than a thousand years ago. However, the main surge of research within aquaculture parasitology occurred with the impressive development of aquaculture over the past century. Protozoan and metazoan parasites, causing disease in domesticated fish in confined environments, have attracted the interest of parasitologists and, due to their economic importance, funding was made available for basic and applied research. This has resulted in a profusion of basic knowledge about parasite biology, physiology, parasite-host interactions, life cycles and biochemistry. Due to the need for effective control methods, various solutions targeting host-parasite interactions (immune responses and host finding), genetics and pharmacological aspects have been in focus.
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Abstract
Finfish aquaculture in freshwater and marine environments is continuously expanding globally, and the potential for a substantial further increase is well documented. The industry is supplying fish products for human consumption to the same extent as capture fisheries, and new fish species for domestication are still being selected by the industry. The challenge faced by all aquacultured species, classical and novel, is the range of pathogens associated with each new fish type. A fish host in its natural environment carries a series of more or less specific parasites (specialists and generalists). Some of these show a marked ability to propagate in aquaculture settings. They may then elicit disease when infection intensities in the confined aquaculture environment reach high levels. In addition, the risk of transmission of parasites from aquaculture enterprises to wild fish stocks adds to the parasitic challenge. Control programmes of various kinds are needed and these may include chemotherapeutants and medicines as the farmer's first and convenient choice, but mechanical, biological, immunological and genetic control methods are available solutions. New methods are still to be developed by scrutinizing the life cycle of each particular parasite species and pin-pointing the vulnerable stage to be targeted. As parasites exhibit a huge potential for adaptation to environmental changes, one must realize that only one approach rarely is sufficient. The present work therefore elaborates on and advocates for implementation of integrated control strategies for diseases caused by protozoan and metazoan parasites.
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Etayo A, Le HTMD, Araujo P, Lie KK, Sæle Ø. Dietary Lipid Modulation of Intestinal Serotonin in Ballan Wrasse ( Labrus bergylta)- In Vitro Analyses. Front Endocrinol (Lausanne) 2021; 12:560055. [PMID: 33833735 PMCID: PMC8021958 DOI: 10.3389/fendo.2021.560055] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/07/2020] [Accepted: 03/01/2021] [Indexed: 12/28/2022] Open
Abstract
Serotonin (5-HT) is pivotal in the complex regulation of gut motility and consequent digestion of nutrients via multiple receptors. We investigated the serotonergic system in an agastric fish species, the ballan wrasse (Labrus bergylta) as it represents a unique model for intestinal function. Here we present evidence of the presence of enterochromaffin cells (EC cells) in the gut of ballan wrasse comprising transcriptomic data on EC markers like adra2a, trpa1, adgrg4, lmxa1, spack1, serpina10, as well as the localization of 5-HT and mRNA of the rate limiting enzyme; tryptophan hydroxylase (tph1) in the gut epithelium. Second, we examined the effects of dietary marine lipids on the enteric serotonergic system in this stomach-less teleost by administrating a hydrolyzed lipid bolus in ex vivo guts in an organ bath system. Modulation of the mRNA expression from the tryptophan hydroxylase tph1 (EC cells isoform), tph2 (neural isoform), and other genes involved in the serotonergic machinery were tracked. Our results showed no evidence to confirm that the dietary lipid meal did boost the production of 5-HT within the EC cells as mRNA tph1 was weakly regulated postprandially. However, dietary lipid seemed to upregulate the post-prandial expression of tph2 found in the serotonergic neurons. 5-HT in the intestinal tissue increased 3 hours after "exposure" of lipids, as was observed in the mRNA expression of tph2. This suggest that serotonergic neurons and not EC cells are responsible for the substantial increment of 5-HT after a lipid-reach "meal" in ballan wrasse. Cells expressing tph1 were identified in the gut epithelium, characteristic for EC cells. However, Tph1 positive cells were also present in the lamina propria. Characterization of these cells together with their implications in the serotonergic system will contribute to broad the scarce knowledge of the serotonergic system across teleosts.
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Barrett LT, Overton K, Stien LH, Oppedal F, Dempster T. Effect of cleaner fish on sea lice in Norwegian salmon aquaculture: a national scale data analysis. Int J Parasitol 2020; 50:787-796. [PMID: 32035989 DOI: 10.1016/j.ijpara.2019.12.005] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2019] [Revised: 11/25/2019] [Accepted: 12/03/2019] [Indexed: 11/24/2022]
Abstract
The salmon aquaculture industry has adopted the use of invertivorous 'cleaner fishes' (CF) for biological control of sea louse infestations on farmed salmon. At present, ~50 million CF are used annually in Norway alone, with variable success in experimental and industrial contexts. We used a national scale database of louse counts, delousing treatments and CF stocking events on Norwegian salmon farms to test for evidence of CF efficacy at 488 sites that completed a grow-out cycle within 2016-2018. Our analysis revealed that sites using more CF over the duration of a grow-out cycle did not have fewer lice on average, likely because CF use is reactive and in proportion to the scale of the louse problem. Over time within sites, we found that (i) sites using more CF early in the grow-out cycle were able to wait slightly longer (conservatively, a 5.2 week delay with 5000 CF stocked week-1) before conducting the first delousing treatment, and (ii) CF stocking events were followed, on average, by a small reduction in louse population growth rates. However, both effects were small and highly variable, and louse population growth rates remained positive on average, even when large numbers of CF were used (tens of thousands per site). Moreover, effects of CF on louse density tended to be short-lived, likely reflecting mortality and escape of stocked CF. Overall, the data indicate that while some sites consistently obtain good results from CF, there is also widespread suboptimal use. A better understanding of factors affecting CF efficacy in commercial sea cages is required to inform legislation and drive more efficient and ethical use of CF by the salmon aquaculture industry.
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Affiliation(s)
- Luke T Barrett
- Sustainable Aquaculture Laboratory - Temperate and Tropical (SALTT), School of BioSciences, University of Melbourne, Victoria 3010, Australia.
| | - Kathy Overton
- Sustainable Aquaculture Laboratory - Temperate and Tropical (SALTT), School of BioSciences, University of Melbourne, Victoria 3010, Australia
| | - Lars H Stien
- Institute of Marine Research, Matre Research Station, 5984 Matredal, Norway
| | - Frode Oppedal
- Institute of Marine Research, Matre Research Station, 5984 Matredal, Norway
| | - Tim Dempster
- Sustainable Aquaculture Laboratory - Temperate and Tropical (SALTT), School of BioSciences, University of Melbourne, Victoria 3010, Australia
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McEwan GF, Groner ML, Cohen AAB, Imsland AKD, Revie CW. Modelling sea lice control by lumpfish on Atlantic salmon farms: interactions with mate limitation, temperature and treatment rules. Dis Aquat Organ 2019; 133:69-82. [PMID: 31089004 DOI: 10.3354/dao03329] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Atlantic salmon farming is one of the largest aquaculture sectors in the world. A major impact on farm economics, fish welfare and, potentially, nearby wild salmonid populations, is the sea louse ectoparasite Lepeophtheirus salmonis. Sea louse infestations are most often controlled through application of chemicals, but in most farming regions, sea lice have evolved resistance to the small set of available chemicals. Therefore, alternative treatment methodologies are becoming more widely used. One increasingly common alternative treatment involves the co-culture of farmed salmon with cleaner fish, which prey on sea lice. However, despite their wide use, little is understood about the situations in which cleaner fish are most effective. For example, previous work suggests that a low parasite density results in sea lice finding it difficult to acquire mates, reducing fecundity and population growth. Other work suggests that environmental conditions such as temperature and external sea louse pressure have substantial impact on this mate limitation threshold and may even remove the effect entirely. We used an Agent-Based Model (ABM) to simulate cleaner fish on a salmon farm to explore interactions between sea louse mating behaviour, cleaner fish feeding rate, temperature and external sea louse pressure. We found that sea louse mating has a substantial effect on sea louse infestations under a variety of environmental conditions. Our results suggest that cleaner fish can control sea louse infestations most effectively by maintaining the population below critical density thresholds.
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Affiliation(s)
- Gregor F McEwan
- Department of Health Management, University of Prince Edward Island, Charlottetown, PE C1A 4P3, Canada
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7
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Cox R, Groner ML, Todd CD, Gettinby G, Patanasatienkul T, Revie CW. Mate limitation in sea lice infesting wild salmon hosts: the influence of parasite sex ratio and aggregation. Ecosphere 2017. [DOI: 10.1002/ecs2.2040] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Affiliation(s)
- R. Cox
- Department of Health Management; Atlantic Veterinary College; University of Prince Edward Island; Charlottetown Prince Edward Island C1A 4P3 Canada
| | - M. L. Groner
- Department of Health Management; Atlantic Veterinary College; University of Prince Edward Island; Charlottetown Prince Edward Island C1A 4P3 Canada
| | - C. D. Todd
- Scottish Oceans Institute; University of St. Andrews; St. Andrews KY16 8LB UK
| | - G. Gettinby
- Department of Mathematics and Statistics; University of Strathclyde; Glasgow G1 1XH UK
| | - T. Patanasatienkul
- Department of Health Management; Atlantic Veterinary College; University of Prince Edward Island; Charlottetown Prince Edward Island C1A 4P3 Canada
| | - C. W. Revie
- Department of Health Management; Atlantic Veterinary College; University of Prince Edward Island; Charlottetown Prince Edward Island C1A 4P3 Canada
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8
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Dunkley K, Cable J, Perkins SE. The selective cleaning behaviour of juvenile blue-headed wrasse (Thalassoma bifasciatum) in the Caribbean. Behav Processes 2017; 147:5-12. [PMID: 29247694 DOI: 10.1016/j.beproc.2017.12.005] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2017] [Revised: 12/01/2017] [Accepted: 12/06/2017] [Indexed: 11/29/2022]
Abstract
Through the removal of parasites, dead skin and mucus from the bodies of visiting reef fish (clients), cleaner fish have a significant ecosystem function in the ecology of coral reefs. Cleaners gain nutrition from these interactions and through offering a 'service' are afforded protection from predators. Given these benefits, it is unclear why more fish do not engage in cleaning, and why part-time cleaning strategies exist. On coral reefs, dedicated species clean throughout their life, whereas some species are facultative, employing opportunistic and/or temporary cleaning strategies. Here, we investigate the cleaning behaviour of a facultative species to assess the relative importance of this interaction to the cleaner. Using a combination of focal and event sampling from a coral reef in Tobago, we show that cleaning is not an essential food source for facultative juvenile blue-headed wrasse (Thalassoma bifasciatum), as cleaning rate was unrelated to their foraging rate on the substrate. These wrasse displayed two cleaning strategies: stationary versus wandering cleaning, with cleaning frequency being highest for stationary cleaners. A specific cleaning location facilitated increased cleaning frequency, and wrasse cleaning rate decreased as cleaner or client abundance increased. We also compared juvenile blue-headed wrasse cleaning behaviour to a resident dedicated cleaner, the sharknose goby (Elacatinus evelynae), and showed that, in comparison, juvenile wrasse clean a narrower client range, predominately cleaning three species of gregarious free-ranging surgeonfish (Acanthurus spp.). The wrasse, however, frequently approached these clients without cleaning, which suggests that their selective cleaning strategy may be driven by the acquisition of a particular parasitic food source. Juvenile blue-headed wrasse are generalist foragers, and may thus be limited in their cleaning behaviour by their nutritional requirements, the availability of a suitable cleaning site, and fish density, which ultimately means that they do not adopt more dedicated cleaning roles within the reef community.
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Affiliation(s)
- Katie Dunkley
- School of Biosciences, Cardiff University, Sir Martin Evans Building, Museum Avenue, Cardiff, CF10 3AX, UK.
| | - Jo Cable
- School of Biosciences, Cardiff University, Sir Martin Evans Building, Museum Avenue, Cardiff, CF10 3AX, UK
| | - Sarah E Perkins
- School of Biosciences, Cardiff University, Sir Martin Evans Building, Museum Avenue, Cardiff, CF10 3AX, UK
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McEwan GF, Groner ML, Burnett DL, Fast MD, Revie CW. Managing aquatic parasites for reduced drug resistance: lessons from the land. J R Soc Interface 2017; 13:rsif.2016.0830. [PMID: 28003529 DOI: 10.1098/rsif.2016.0830] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2016] [Accepted: 11/28/2016] [Indexed: 11/12/2022] Open
Abstract
Atlantic salmon farming is one of the largest aquaculture industries in the world. A major problem in salmon farms is the sea louse ectoparasite Lepeophtheirus salmonis, which can cause stress, secondary infection and sometimes mortality in the salmon host. Sea lice have substantial impacts on farm economics and potentially nearby wild salmonid populations. The most common method of controlling sea louse infestations is application of chemicals. However, most farming regions worldwide have observed resistance to the small set of treatment chemicals that are available. Despite this, there has been little investigation of treatment strategies for managing resistance in aquaculture. In this article, we compare four archetypical treatment strategies inspired by agriculture, where the topic has a rich history of study, and add a fifth strategy common in aquaculture. We use an agent-based model (ABM) to simulate these strategies and their varying applications of chemicals over time and space. We analyse the ABM output to compare how the strategies perform in controlling louse abundance, number of treatments required and levels of resistance in the sea louse population. Our results indicated that among the approaches considered applying chemicals in combination was the most effective over the long term.
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Affiliation(s)
- Gregor F McEwan
- Centre for Veterinary and Epidemiological Research, Department of Health Management, Atlantic Veterinary College, University of Prince Edward Island, 550 University Avenue, Charlottetown, Prince Edward Island, Canada C1A 4P3
| | - Maya L Groner
- Departments of Fisheries Management and Aquatic Health Sciences, Virginia Institute of Marine Science, 1375 Greate Road, Gloucester Point, VA 23062-1346, USA
| | - Danielle L Burnett
- Centre for Veterinary and Epidemiological Research, Department of Health Management, Atlantic Veterinary College, University of Prince Edward Island, 550 University Avenue, Charlottetown, Prince Edward Island, Canada C1A 4P3
| | - Mark D Fast
- Hoplite Research Group, Department of Pathology and Microbiology, Atlantic Veterinary College, University of Prince Edward Island, 550 University Avenue, Charlottetown, Prince Edward Island, Canada C1A 4P3
| | - Crawford W Revie
- Centre for Veterinary and Epidemiological Research, Department of Health Management, Atlantic Veterinary College, University of Prince Edward Island, 550 University Avenue, Charlottetown, Prince Edward Island, Canada C1A 4P3
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Aldrin M, Huseby R, Stien A, Grøntvedt R, Viljugrein H, Jansen P. A stage-structured Bayesian hierarchical model for salmon lice populations at individual salmon farms – Estimated from multiple farm data sets. Ecol Modell 2017. [DOI: 10.1016/j.ecolmodel.2017.05.019] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Groner ML, Rogers LA, Bateman AW, Connors BM, Frazer LN, Godwin SC, Krkošek M, Lewis MA, Peacock SJ, Rees EE, Revie CW, Schlägel UE. Lessons from sea louse and salmon epidemiology. Philos Trans R Soc Lond B Biol Sci 2016; 371:rstb.2015.0203. [PMID: 26880836 DOI: 10.1098/rstb.2015.0203] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023] Open
Abstract
Effective disease management can benefit from mathematical models that identify drivers of epidemiological change and guide decision-making. This is well illustrated in the host-parasite system of sea lice and salmon, which has been modelled extensively due to the economic costs associated with sea louse infections on salmon farms and the conservation concerns associated with sea louse infections on wild salmon. Consequently, a rich modelling literature devoted to sea louse and salmon epidemiology has been developed. We provide a synthesis of the mathematical and statistical models that have been used to study the epidemiology of sea lice and salmon. These studies span both conceptual and tactical models to quantify the effects of infections on host populations and communities, describe and predict patterns of transmission and dispersal, and guide evidence-based management of wild and farmed salmon. As aquaculture production continues to increase, advances made in modelling sea louse and salmon epidemiology should inform the sustainable management of marine resources.
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Affiliation(s)
- Maya L Groner
- Department of Health Management, Centre for Veterinary and Epidemiological Research, Atlantic Veterinary College, University of Prince Edward Island, 550 University Avenue, Charlottetown, Prince Edward Island, Canada C1A 4P3
| | - Luke A Rogers
- Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks Street, Toronto, Ontario, Canada M5S 3B2
| | - Andrew W Bateman
- Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks Street, Toronto, Ontario, Canada M5S 3B2 Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada T6G 2E9 Salmon Coast Field Station, Simoom Sound, British Columbia, Canada V0P 1S0
| | - Brendan M Connors
- Salmon Coast Field Station, Simoom Sound, British Columbia, Canada V0P 1S0 ESSA Technologies Ltd, Vancouver, British Columbia, Canada V6H 3H4 School of Resource and Environmental Management, Simon Fraser University, Burnaby, British Columbia, Canada V5A 1S6
| | - L Neil Frazer
- Salmon Coast Field Station, Simoom Sound, British Columbia, Canada V0P 1S0 Department of Geology and Geophysics, School of Ocean and Earth Science and Technology, University of Hawaii at Manoa, Honolulu, Hawaii 96822, USA
| | - Sean C Godwin
- Earth to Ocean Research Group, Department of Biological Sciences, Simon Fraser University, Burnaby, British Columbia, Canada V5A 1S6
| | - Martin Krkošek
- Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks Street, Toronto, Ontario, Canada M5S 3B2 Salmon Coast Field Station, Simoom Sound, British Columbia, Canada V0P 1S0
| | - Mark A Lewis
- Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada T6G 2E9 Department of Mathematical and Statistical Sciences, University of Alberta, Edmonton, Alberta, Canada T6G 2G1
| | - Stephanie J Peacock
- Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada T6G 2E9
| | - Erin E Rees
- Department of Health Management, Centre for Veterinary and Epidemiological Research, Atlantic Veterinary College, University of Prince Edward Island, 550 University Avenue, Charlottetown, Prince Edward Island, Canada C1A 4P3
| | - Crawford W Revie
- Department of Health Management, Centre for Veterinary and Epidemiological Research, Atlantic Veterinary College, University of Prince Edward Island, 550 University Avenue, Charlottetown, Prince Edward Island, Canada C1A 4P3
| | - Ulrike E Schlägel
- Department of Mathematical and Statistical Sciences, University of Alberta, Edmonton, Alberta, Canada T6G 2G1
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Groner ML, Maynard J, Breyta R, Carnegie RB, Dobson A, Friedman CS, Froelich B, Garren M, Gulland FMD, Heron SF, Noble RT, Revie CW, Shields JD, Vanderstichel R, Weil E, Wyllie-Echeverria S, Harvell CD. Managing marine disease emergencies in an era of rapid change. Philos Trans R Soc Lond B Biol Sci 2016; 371:rstb.2015.0364. [PMID: 26880835 DOI: 10.1098/rstb.2015.0364] [Citation(s) in RCA: 69] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023] Open
Abstract
Infectious marine diseases can decimate populations and are increasing among some taxa due to global change and our increasing reliance on marine environments. Marine diseases become emergencies when significant ecological, economic or social impacts occur. We can prepare for and manage these emergencies through improved surveillance, and the development and iterative refinement of approaches to mitigate disease and its impacts. Improving surveillance requires fast, accurate diagnoses, forecasting disease risk and real-time monitoring of disease-promoting environmental conditions. Diversifying impact mitigation involves increasing host resilience to disease, reducing pathogen abundance and managing environmental factors that facilitate disease. Disease surveillance and mitigation can be adaptive if informed by research advances and catalysed by communication among observers, researchers and decision-makers using information-sharing platforms. Recent increases in the awareness of the threats posed by marine diseases may lead to policy frameworks that facilitate the responses and management that marine disease emergencies require.
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Affiliation(s)
- Maya L Groner
- Centre for Veterinary Epidemiological Research, Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, Prince Edward Island, Canada C1A 4P3
| | - Jeffrey Maynard
- Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY 14853, USA Laboratoire d'Excellence 'CORAIL' USR 3278 CNRS-EPHE, CRIOBE, Papetoai, Moorea, French Polynesia
| | - Rachel Breyta
- School of Aquatic and Fisheries Sciences, University of Washington, Seattle, WA 98195, USA
| | - Ryan B Carnegie
- Department of Aquatic Health Sciences, Virginia Institute of Marine Science, College of William and Mary, Gloucester Point, VA 23062, USA
| | - Andy Dobson
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ 08544, USA
| | - Carolyn S Friedman
- School of Aquatic and Fisheries Sciences, University of Washington, Seattle, WA 98195, USA
| | - Brett Froelich
- Institute of Marine Sciences, University of North Carolina-Chapel Hill, Morehead City, NC 28557, USA
| | - Melissa Garren
- Division of Science and Environmental Policy, California State University Monterey Bay, 100 Campus Center, Seaside, CA 93955, USA
| | | | - Scott F Heron
- NOAA Coral Reef Watch, NESDIS Center for Satellite Applications and Research, 5830 University Research Ct., E/RA3, College Park, MD 20740, USA Marine Geophysical Laboratory, Physics Department, College of Science, Technology and Engineering, James Cook University, Townsville, Queensland 4814, Australia
| | - Rachel T Noble
- Institute of Marine Sciences, University of North Carolina-Chapel Hill, Morehead City, NC 28557, USA
| | - Crawford W Revie
- Centre for Veterinary Epidemiological Research, Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, Prince Edward Island, Canada C1A 4P3
| | - Jeffrey D Shields
- Department of Aquatic Health Sciences, Virginia Institute of Marine Science, College of William and Mary, Gloucester Point, VA 23062, USA
| | - Raphaël Vanderstichel
- Centre for Veterinary Epidemiological Research, Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, Prince Edward Island, Canada C1A 4P3
| | - Ernesto Weil
- Department of Marine Sciences, University of Puerto Rico, Mayaguez, PR 00680, USA
| | - Sandy Wyllie-Echeverria
- Friday Harbor Laboratories, University of Washington, Friday Harbor, WA 98250, USA Center for Marine and Environmental Studies, University of the Virgin Islands, St Thomas, VI 00802, USA
| | - C Drew Harvell
- Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY 14853, USA
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McEwan GF, Groner ML, Fast MD, Gettinby G, Revie CW. Using Agent-Based Modelling to Predict the Role of Wild Refugia in the Evolution of Resistance of Sea Lice to Chemotherapeutants. PLoS One 2015; 10:e0139128. [PMID: 26485023 PMCID: PMC4618729 DOI: 10.1371/journal.pone.0139128] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2015] [Accepted: 09/08/2015] [Indexed: 11/18/2022] Open
Abstract
A major challenge for Atlantic salmon farming in the northern hemisphere is infestation by the sea louse parasite Lepeophtheirus salmonis. The most frequent method of controlling these sea louse infestations is through the use of chemical treatments. However, most major salmon farming areas have observed resistance to common chemotherapeutants. In terrestrial environments, many strategies employed to manage the evolution of resistance involve the use of refugia, where a portion of the population is left untreated to maintain susceptibility. While refugia have not been deliberately used in Atlantic salmon farming, wild salmon populations that migrate close to salmon farms may act as natural refugia. In this paper we describe an agent-based model that explores the influence of different sizes of wild salmon populations on resistance evolution in sea lice on a salmon farm. Using the model, we demonstrate that wild salmon populations can act as refugia that limit the evolution of resistance in the sea louse populations. Additionally, we demonstrate that an increase in the size of the population of wild salmon results in an increased effect in slowing the evolution of resistance. We explore the effect of a population fitness cost associated with resistance, finding that in some cases it substantially reduces the speed of evolution to chemical treatments.
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Affiliation(s)
- Gregor F. McEwan
- Centre for Veterinary and Epidemiological Research, Department of Health Management, Atlantic Veterinary College, University of Prince Edward Island, 550 University Ave, Charlottetown, PE, Canada, C1A 4P3
- * E-mail:
| | - Maya L. Groner
- Centre for Veterinary and Epidemiological Research, Department of Health Management, Atlantic Veterinary College, University of Prince Edward Island, 550 University Ave, Charlottetown, PE, Canada, C1A 4P3
| | - Mark D. Fast
- Department of Anatomy and Physiology, Atlantic Veterinary College, University of Prince Edward Island, 550 University Ave, Charlottetown, PE, Canada, C1A 4P3
| | - George Gettinby
- Department of Mathematics & Statistics, University of Strathclyde, Richmond Street, Glasgow, G1 1XH, Scotland, UK
| | - Crawford W. Revie
- Centre for Veterinary and Epidemiological Research, Department of Health Management, Atlantic Veterinary College, University of Prince Edward Island, 550 University Ave, Charlottetown, PE, Canada, C1A 4P3
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Murray AG. A Modelling Framework for Assessing the Risk of Emerging Diseases Associated with the Use of Cleaner Fish to Control Parasitic Sea Lice on Salmon Farms. Transbound Emerg Dis 2014; 63:e270-7. [DOI: 10.1111/tbed.12273] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2014] [Indexed: 11/30/2022]
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Leclercq E, Davie A, Migaud H. Delousing efficiency of farmed ballan wrasse (Labrus bergylta) against Lepeophtheirus salmonis infecting Atlantic salmon (Salmo salar) post-smolts. Pest Manag Sci 2014; 70:1274-1282. [PMID: 24293262 DOI: 10.1002/ps.3692] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/09/2013] [Accepted: 11/29/2013] [Indexed: 06/02/2023]
Abstract
BACKGROUND Cleaner-fish (wrasse, Labridae) are increasingly deployed within the Atlantic salmon (Salmo salar L.) industry as a biological control against sea-lice (Lepeophtheirus salmonis Krøyer). Two tank-based trials were performed to test the effect of farmed ballan wrasse (Labrus bergylta Ascanius) body mass and supplementary feeding on the delousing of Atlantic salmon post-smolts with an initial infection level of ∼12 lice salmon(-1) and a ∼5% wrasse:salmon ratio. RESULTS Sea-louse levels below 0.5 lice salmon(-1) were obtained within 84 h, and preferential preying upon larger motile stages was found. The wrasse body mass and the availability of fresh, opened blue mussels (Mytilus edulis L.) did not significantly affect delousing efficiency. The functional predator response was linear, showing no minimum prey density threshold for sea-louse foraging and no satiation plateau, in spite of the high consumption rates measured. Sea-louse infection levels declined following a one-phase exponential decay model, with a standardised decline time constant of 0.8-1.3% h(-1) for each wrasse stocked per 100 salmon. CONCLUSIONS Farmed ballan wrasse are confirmed as highly effective therapeutic and preventive biological controls against sea-lice. The study supports the current minimum hatchery size target (10 mm total length) and the use of supplementary feeding to sustain the wrasse stocks in operation. The functional predator response and the standardised decline time constant of sea-louse abundance are proposed as useful indicators of delousing efficiency.
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Affiliation(s)
- Eric Leclercq
- Institute of Aquaculture, University of Stirling, Stirling, Scotland, UK
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Groner ML, Gettinby G, Stormoen M, Revie CW, Cox R. Modelling the impact of temperature-induced life history plasticity and mate limitation on the epidemic potential of a marine ectoparasite. PLoS One 2014; 9:e88465. [PMID: 24505493 PMCID: PMC3914972 DOI: 10.1371/journal.pone.0088465] [Citation(s) in RCA: 47] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2013] [Accepted: 01/07/2014] [Indexed: 11/19/2022] Open
Abstract
Temperature is hypothesized to contribute to increased pathogenicity and virulence of many marine diseases. The sea louse (Lepeophtheirus salmonis) is an ectoparasite of salmonids that exhibits strong life-history plasticity in response to temperature; however, the effect of temperature on the epidemiology of this parasite has not been rigorously examined. We used matrix population modelling to examine the influence of temperature on demographic parameters of sea lice parasitizing farmed salmon. Demographically-stochastic population projection matrices were created using parameters from the existing literature on vital rates of sea lice at different fixed temperatures and yearly temperature profiles. In addition, we quantified the effectiveness of a single stage-specific control applied at different times during a year with seasonal temperature changes. We found that the epidemic potential of sea lice increased with temperature due to a decrease in generation time and an increase in the net reproductive rate. In addition, mate limitation constrained population growth more at low temperatures than at high temperatures. Our model predicts that control measures targeting preadults and chalimus are most effective regardless of the temperature. The predictions from this model suggest that temperature can dramatically change vital rates of sea lice and can increase population growth. The results of this study suggest that sea surface temperatures should be considered when choosing salmon farm sites and designing management plans to control sea louse infestations. More broadly, this study demonstrates the utility of matrix population modelling for epidemiological studies.
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Affiliation(s)
- Maya L. Groner
- Centre for Veterinary Epidemiological Research, Department of Health Management, Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, Prince Edward Island, Canada
- * E-mail:
| | - George Gettinby
- Department of Mathematics and Statistics, University of Strathclyde, Glasgow, Scotland, United Kingdom
| | - Marit Stormoen
- Centre of Epidemiology and Biostatistics, Norwegian School of Veterinary Science, Oslo, Norway
| | - Crawford W. Revie
- Centre for Veterinary Epidemiological Research, Department of Health Management, Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, Prince Edward Island, Canada
| | - Ruth Cox
- Centre for Veterinary Epidemiological Research, Department of Health Management, Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, Prince Edward Island, Canada
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Affiliation(s)
- Okechukwu O. Igboeli
- Hoplite Research Group, Department of Pathology and Microbiology, Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, Prince Edward Island, Canada
| | - John F. Burka
- Department of Biomedical Sciences, Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, Prince Edward Island, Canada
| | - Mark D. Fast
- Hoplite Research Group, Department of Pathology and Microbiology, Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, Prince Edward Island, Canada
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Abstract
Capturing the dynamism that pervades biological systems requires a computational approach that can accommodate both the continuous features of the system environment as well as the flexible and heterogeneous nature of component interactions. This presents a serious challenge for the more traditional mathematical approaches that assume component homogeneity to relate system observables using mathematical equations. While the homogeneity condition does not lead to loss of accuracy while simulating various continua, it fails to offer detailed solutions when applied to systems with dynamically interacting heterogeneous components. As the functionality and architecture of most biological systems is a product of multi-faceted individual interactions at the sub-system level, continuum models rarely offer much beyond qualitative similarity. Agent-based modelling is a class of algorithmic computational approaches that rely on interactions between Turing-complete finite-state machines--or agents--to simulate, from the bottom-up, macroscopic properties of a system. In recognizing the heterogeneity condition, they offer suitable ontologies to the system components being modelled, thereby succeeding where their continuum counterparts tend to struggle. Furthermore, being inherently hierarchical, they are quite amenable to coupling with other computational paradigms. The integration of any agent-based framework with continuum models is arguably the most elegant and precise way of representing biological systems. Although in its nascence, agent-based modelling has been utilized to model biological complexity across a broad range of biological scales (from cells to societies). In this article, we explore the reasons that make agent-based modelling the most precise approach to model biological systems that tend to be non-linear and complex.
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