Quantification of Aquabirnaviruses Isolated from Different Host Species by Real-Time RT-PCR

Real-time reverse transcription (RT)-PCR was developed to detect and quantify successfully aquatic birnaviruses (ABVs) from fish tissue and seawater samples. This method detected marine birnavirus (MABV) RNA in several samples, and the detection was specific for ABVs. Monitoring the MABV strain Y-6 RNA quantification by real-time RT-PCR showed replication kinetics of MABV after experimental infection in vitro. We found the quantity of ABVs isolated from different host species by using combined virus absorption in cell culture and real-time RT-PCR. Although all specimens showed no symptoms of viral infection, ABVs were detected regardless of host species. In conclusion, real-time RT-PCR was shown to be a sensitive and reliable tool to detect and quantify ABVs in cultured fish. This method is useful procedure to show details of horizontal or vertical infections by ABVs in the breeding water of aquatic animals.

Viral surveillance of cultured Rainbow Trout in the eastern Black Sea, Turkey

To study the presence and spread of viral fish pathogens in Rainbow Trout Oncorhynchus mykiss in the eastern Black Sea region of Turkey, 172 pooled samples (seven fish per pool) of Rainbow Trout fry from 28 hatcheries were examined from December 2006 to July 2007. Forty-three pools (seven broodfish per pool) of seminal and ovarian fluids from 182 female and 119 male brood Rainbow Trout were also sampled during spawning. Moreover, reproductive fluids (22 pools) of wild trout (Salmo trutta labrax, S. t. caspius, S. t. abanticus, and S. t. macrostigma), captured by electroshocking in the rivers in and around the region, were sampled. Triplicate groups of 40 or 80 Rainbow Trout fry was also challenged with two similar isolates to determine their virulence on trout fry. Enzyme-linked immunosorbent assay was performed on the samples producing cytopathic effect on CHSE-214 cells. The positive results were confirmed with a reverse transcriptase polymerase chain reaction assay. Neither infectious hematopoietic necrosis virus (IHNV) nor viral hemorrhagic septicemia virus (VHSV) was detected during the survey. Of the 28 hatcheries sampled in the Black Sea region, 15 from six provinces tested positive for infectious pancreatic necrosis virus (IPNV) in trout fry. Unexpectedly, all reproductive fluids from both male and female cultured and wild broodstock tested negative for IPNV. Nucleotide sequences of the VP2/NS region of IPNV showed that all isolates collected (n = 38) in the region and surrounding areas belonged to the genogroup III. The findings strongly suggest that IPNV is endemic in the fry of farmed Rainbow Trout within the region. Virus prevention measures should be taken to prevent in-farm spread of these highly contagious, low-virulence isolates.

Detection of Infectious Pancreatic Necrosis Virus in Subclinically Infected Atlantic Salmon by Virus Isolation in Cell Culture or Real-Time Reverse Transcription Polymerase Chain Reaction: Influence of Sample Preservation and Storage

Infectious pancreatic necrosis, an important problem of the salmon industry worldwide, is caused by Infectious pancreatic necrosis virus (IPNV). Fish surviving an IPNV infection become virus carriers, and the identification of infected fish is highly relevant to disease control. The target organ for IPNV diagnosis is the kidney, where the virus persists, usually with low virus loads. The current study documents a real-time reverse transcription polymerase chain reaction (real-time RT-PCR) assay that proved 100 times more sensitive than a conventional RT-PCR. Cell culture and real-time RT-PCR were compared for their ability to detect IPNV in carrier Atlantic salmon kidney samples after different preservation and storage procedures. Storage of whole tissue at −80°C for 1 month and storage of tissue homogenized in transport medium (TM) at +4°C for 1 week before investigation in cell cultures resulted in a marked reduction of virus infectivity. For detection by real-time RT-PCR, storage of whole tissue was suboptimal, whereas storage of tissue homogenized in TM did not affect virus detection. The results of the present study demonstrate that both cell culture and real-time RT-PCR are reliable tests for the detection of low amounts of IPNV in kidneys of carrier Atlantic salmon, and both methods are relatively robust against minor preservation and storage deviations, or both. Preservation of tissues in RNA stabilization solution seems only necessary when samples are to be shipped at ambient temperatures or when laboratory testing might be delayed. Independent of detection method, these results indicate that for long-term storage, samples are best kept at −80°C after homogenization in TM.

Experimental vertical transmission of Macrobrachium rosenbergii nodavirus (MrNV) and extra small virus (XSV) from brooders to progeny in Macrobrachium rosenbergii and Artemia

White tail disease (WTD) is a serious problem in hatcheries and nursery ponds of Macrobrachium rosenbergii in India. Experiments were carried out to determine the possibility of vertical transmission of M. rosenbergii nodavirus (MrNV) and extra small virus (XSV) in M. rosenbergii and Artemia. Prawn broodstock inoculated with MrNV and XSV by oral or immersion challenge survived without any clinical signs of WTD. The brooders spawned 5-7 days after inoculation and the eggs hatched. The survival rate of larvae gradually decreased, and 100% mortality was observed at the post-larvae (PL) stage. Whitish muscle, the typical sign of WTD, was seen in advanced larval developmental stages. The ovarian tissue and fertilized eggs were found to be positive for MrNV/XSV by reverse transcriptase-polymerase chain reaction (RT-PCR) whereas the larval stages showed positive by RT nested PCR (nRT-PCR). In Artemia, reproductive cysts and nauplii derived from challenged brooders were normal and survival rates were within the expected range for normal rearing conditions. The reproductive cysts were found to be positive for MrNV/XSV by RT-PCR whereas the nauplii showed MrNV/XSV-positive by nRT-PCR. The PL of M. rosenbergii fed nauplii derived from challenged Artemia brooders died at 9 days post-inoculum with clinical signs of WTD.

Infectious pancreatic necrosis in Atlantic salmon, Salmo salar L

A clinical and histopathological review was carried out of 21 outbreaks of acute infectious pancreatic necrosis (IPN) in Scottish Atlantic salmon, Salmo salar L., farms (13 marine and eight fresh water) during 1991-2004. A distinctive syndrome was evident in both post-smolts in sea water and fry in fresh water, where liver lesions, which had not previously been associated with IPN, became a consistent finding in addition to the more typical pancreatic and intestinal changes. Initial cases were described in post-smolts in Shetland, but by the end of the period of investigation this type of pathology had extended down the West coast of Scotland and into Ireland. Limited viral strain analysis suggested that similar strains were involved in both fresh water and sea water and that these differed from earlier isolates from rainbow trout, Oncorhynchus mykiss (Walbaum). In fresh water, recovered fish frequently developed a greatly distended intestine associated with accumulation of undigested food. In sea water, after the initial, often significant (50% or more), losses, there were many fish which failed to grow and became chronically emaciated and prone to sea louse infection. Although use of transfer diets containing immune enhancers and the selection of IPN resistant broodstock has reduced losses the disease remains a serious cause of economic loss.

Prevention of infectious diseases in aquaculture

Infectious diseases remain one of the most important limitations to the successful propagation of aquatic animals. Most of the losses caused by pathogens in aquaculture could be prevented by health inspection, adequate environment and sound management practices. Effective control measures, mainly based upon 1) avoidance of pathogens 2) modification of the environment 3) improvement of host resistance 4) vaccination and 5) chemoprophylaxis are described.

Adsorption to fish sperm of vertically transmitted fish viruses

More than 99 percent of a vertically transmitted fish rhabdovirus, infectious hematopoietic necrosis virus, was removed from suspension in less than 1 minute by adsorption to the surface membrane of sperm from two genera of salmonid fishes. The vertically transmitted, infectious pancreatic necrosis virus adsorbed to a lesser degree, but no adsorption occurred with a second fish rhabdovirus that is not vertically transmitted. Such adsorption may be involved in vertical transmission of these viruses.

The viral diseases of fish: a review through 1978. Part 1: Diseases of proven viral etiology

In this review, a survey is made of the published literature on the viral diseases of fish available up to and including the year 1978. It is divided into two main sections. Part 1 describes 11 diseases where a virus has been isolated and proven to be the causative agent. Part 2 discusses 16 diseases where there is reason to suspect viral etiology because of evidence deriving from electron microscopy or transmission experiments with bacteria-free filtrates of homogenates of diseased tissue, but where final proof of a causative relationship is lacking. The review attempts to provide the most significant information on the disease process itself, in most cases including external signs, fish species susceptible, pathology, geographic distribution, existence of carriers, methods of transmission, and control. It also gives the most recent and significant data concerning the nature of the causative virus, including its cultural, biological, and physicochemical properties, where such information is available.