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For: Yao MC, Chao JL. RNA-guided DNA deletion in Tetrahymena: an RNAi-based mechanism for programmed genome rearrangements. Annu Rev Genet 2006;39:537-59. [PMID: 16285871 DOI: 10.1146/annurev.genet.39.073003.095906] [Citation(s) in RCA: 94] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Number Cited by Other Article(s)
1
Zhang L, Cervantes MD, Pan S, Lindsley J, Dabney A, Kapler GM. Transcriptome analysis of the binucleate ciliate Tetrahymena thermophila with asynchronous nuclear cell cycles. Mol Biol Cell 2023;34:rs1. [PMID: 36475712 PMCID: PMC9930529 DOI: 10.1091/mbc.e22-08-0326] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]  Open
2
Phenotypic plasticity through disposable genetic adaptation in ciliates. Trends Microbiol 2021;30:120-130. [PMID: 34275698 DOI: 10.1016/j.tim.2021.06.007] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2020] [Revised: 06/16/2021] [Accepted: 06/17/2021] [Indexed: 12/28/2022]
3
Cheng YH, Liu CFJ, Yu YH, Jhou YT, Fujishima M, Tsai IJ, Leu JY. Genome plasticity in Paramecium bursaria revealed by population genomics. BMC Biol 2020;18:180. [PMID: 33250052 PMCID: PMC7702705 DOI: 10.1186/s12915-020-00912-2] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2019] [Accepted: 10/29/2020] [Indexed: 11/25/2022]  Open
4
Timoshevskiy VA, Timoshevskaya NY, Smith JJ. Germline-Specific Repetitive Elements in Programmatically Eliminated Chromosomes of the Sea Lamprey (Petromyzon marinus). Genes (Basel) 2019;10:E832. [PMID: 31652530 PMCID: PMC6826781 DOI: 10.3390/genes10100832] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2019] [Revised: 10/17/2019] [Accepted: 10/19/2019] [Indexed: 12/26/2022]  Open
5
Lin CYG, Chao JL, Tsai HK, Chalker D, Yao MC. Setting boundaries for genome-wide heterochromatic DNA deletions through flanking inverted repeats in Tetrahymena thermophila. Nucleic Acids Res 2019;47:5181-5192. [PMID: 30918956 PMCID: PMC6547420 DOI: 10.1093/nar/gkz209] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2018] [Revised: 03/03/2019] [Accepted: 03/26/2019] [Indexed: 12/13/2022]  Open
6
Neeb ZT, Nowacki M. RNA-mediated transgenerational inheritance in ciliates and plants. Chromosoma 2018;127:19-27. [PMID: 29230532 PMCID: PMC5818585 DOI: 10.1007/s00412-017-0655-4] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2017] [Revised: 12/05/2017] [Accepted: 12/05/2017] [Indexed: 11/30/2022]
7
Tsypin LM, Turkewitz AP. The Co-regulation Data Harvester: automating gene annotation starting from a transcriptome database. SOFTWAREX 2017;6:165-171. [PMID: 29104906 PMCID: PMC5663188 DOI: 10.1016/j.softx.2017.06.006] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
8
Brown SC, Bourge M, Maunoury N, Wong M, Wolfe Bianchi M, Lepers-Andrzejewski S, Besse P, Siljak-Yakovlev S, Dron M, Satiat-Jeunemaître B. DNA Remodeling by Strict Partial Endoreplication in Orchids, an Original Process in the Plant Kingdom. Genome Biol Evol 2017;9:1051-1071. [PMID: 28419219 PMCID: PMC5546068 DOI: 10.1093/gbe/evx063] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 04/11/2017] [Indexed: 12/12/2022]  Open
9
Hamilton EP, Kapusta A, Huvos PE, Bidwell SL, Zafar N, Tang H, Hadjithomas M, Krishnakumar V, Badger JH, Caler EV, Russ C, Zeng Q, Fan L, Levin JZ, Shea T, Young SK, Hegarty R, Daza R, Gujja S, Wortman JR, Birren BW, Nusbaum C, Thomas J, Carey CM, Pritham EJ, Feschotte C, Noto T, Mochizuki K, Papazyan R, Taverna SD, Dear PH, Cassidy-Hanley DM, Xiong J, Miao W, Orias E, Coyne RS. Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genome. eLife 2016;5. [PMID: 27892853 PMCID: PMC5182062 DOI: 10.7554/elife.19090] [Citation(s) in RCA: 113] [Impact Index Per Article: 12.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2016] [Accepted: 11/14/2016] [Indexed: 12/30/2022]  Open
10
Lin CYG, Lin IT, Yao MC. Programmed Minichromosome Elimination as a Mechanism for Somatic Genome Reduction in Tetrahymena thermophila. PLoS Genet 2016;12:e1006403. [PMID: 27806059 PMCID: PMC5091840 DOI: 10.1371/journal.pgen.1006403] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2016] [Accepted: 10/04/2016] [Indexed: 01/12/2023]  Open
11
Programmed Genome Rearrangements in Tetrahymena. Microbiol Spectr 2016;2. [PMID: 26104448 DOI: 10.1128/microbiolspec.mdna3-0012-2014] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]  Open
12
Woo TT, Chao JL, Yao MC. Dynamic distributions of long double-stranded RNA in Tetrahymena during nuclear development and genome rearrangements. J Cell Sci 2016;129:1046-58. [DOI: 10.1242/jcs.178236] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2015] [Accepted: 01/05/2016] [Indexed: 11/20/2022]  Open
13
Tóth KF, Pezic D, Stuwe E, Webster A. The piRNA Pathway Guards the Germline Genome Against Transposable Elements. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2016;886:51-77. [PMID: 26659487 DOI: 10.1007/978-94-017-7417-8_4] [Citation(s) in RCA: 132] [Impact Index Per Article: 14.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/04/2022]
14
Gebert D, Rosenkranz D. RNA-based regulation of transposon expression. WILEY INTERDISCIPLINARY REVIEWS-RNA 2015;6:687-708. [DOI: 10.1002/wrna.1310] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2015] [Revised: 09/08/2015] [Accepted: 09/13/2015] [Indexed: 11/12/2022]
15
Assumpção CB, Calcagno DQ, Araújo TMT, Santos SEBD, Santos ÂKCRD, Riggins GJ, Burbano RR, Assumpção PP. The role of piRNA and its potential clinical implications in cancer. Epigenomics 2015;7:975-84. [PMID: 25929784 PMCID: PMC4750480 DOI: 10.2217/epi.15.37] [Citation(s) in RCA: 70] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]  Open
16
Lee KJ, Conley AB, Lunyak VV, Jordan IK. Do human transposable element small RNAs serve primarily as genome defenders or genome regulators? Mob Genet Elements 2014;2:19-25. [PMID: 22754749 PMCID: PMC3383446 DOI: 10.4161/mge.19031] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]  Open
17
Mochizuki K, Kurth HM. Loading and pre-loading processes generate a distinct siRNA population in Tetrahymena. Biochem Biophys Res Commun 2013;436:497-502. [PMID: 23770361 PMCID: PMC3714595 DOI: 10.1016/j.bbrc.2013.05.133] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2013] [Accepted: 05/30/2013] [Indexed: 12/04/2022]
18
Xiong J, Lu Y, Feng J, Yuan D, Tian M, Chang Y, Fu C, Wang G, Zeng H, Miao W. Tetrahymena functional genomics database (TetraFGD): an integrated resource for Tetrahymena functional genomics. DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION 2013;2013:bat008. [PMID: 23482072 PMCID: PMC3594985 DOI: 10.1093/database/bat008] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
19
Gao S, Liu Y. Intercepting noncoding messages between germline and soma. Genes Dev 2012;26:1774-9. [PMID: 22895251 DOI: 10.1101/gad.199992.112] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
20
Hirano T. Condensins: universal organizers of chromosomes with diverse functions. Genes Dev 2012;26:1659-78. [PMID: 22855829 DOI: 10.1101/gad.194746.112] [Citation(s) in RCA: 279] [Impact Index Per Article: 21.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
21
The Paramecium germline genome provides a niche for intragenic parasitic DNA: evolutionary dynamics of internal eliminated sequences. PLoS Genet 2012;8:e1002984. [PMID: 23071448 PMCID: PMC3464196 DOI: 10.1371/journal.pgen.1002984] [Citation(s) in RCA: 128] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2012] [Accepted: 08/09/2012] [Indexed: 12/30/2022]  Open
22
Zahler AM, Neeb ZT, Lin A, Katzman S. Mating of the stichotrichous ciliate Oxytricha trifallax induces production of a class of 27 nt small RNAs derived from the parental macronucleus. PLoS One 2012;7:e42371. [PMID: 22900016 PMCID: PMC3416858 DOI: 10.1371/journal.pone.0042371] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2012] [Accepted: 07/06/2012] [Indexed: 01/04/2023]  Open
23
Lin IT, Chao JL, Yao MC. An essential role for the DNA breakage-repair protein Ku80 in programmed DNA rearrangements in Tetrahymena thermophila. Mol Biol Cell 2012;23:2213-25. [PMID: 22513090 PMCID: PMC3364183 DOI: 10.1091/mbc.e11-11-0952] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]  Open
24
Wei W, Ba Z, Gao M, Wu Y, Ma Y, Amiard S, White CI, Rendtlew Danielsen JM, Yang YG, Qi Y. A role for small RNAs in DNA double-strand break repair. Cell 2012;149:101-12. [PMID: 22445173 DOI: 10.1016/j.cell.2012.03.002] [Citation(s) in RCA: 443] [Impact Index Per Article: 34.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2011] [Revised: 01/15/2012] [Accepted: 03/07/2012] [Indexed: 12/13/2022]
25
Tetrahymena thermophila JMJD3 homolog regulates H3K27 methylation and nuclear differentiation. EUKARYOTIC CELL 2012;11:601-14. [PMID: 22427430 DOI: 10.1128/ec.05290-11] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
26
Role of ATG8 and autophagy in programmed nuclear degradation in Tetrahymena thermophila. EUKARYOTIC CELL 2012;11:494-506. [PMID: 22366125 DOI: 10.1128/ec.05296-11] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
27
Unusual augmentation of germline genome size in Cyclops kolensis (Crustacea, Copepoda): further evidence in support of a revised model of chromatin diminution. Chromosome Res 2012;19:911-23. [PMID: 21953028 DOI: 10.1007/s10577-011-9234-3] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
28
Genome-Scale Analysis of Programmed DNA Elimination Sites in Tetrahymena thermophila. G3-GENES GENOMES GENETICS 2011;1:515-22. [PMID: 22384362 PMCID: PMC3276166 DOI: 10.1534/g3.111.000927] [Citation(s) in RCA: 56] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/21/2011] [Accepted: 09/30/2011] [Indexed: 01/31/2023]
29
Li W, Saraiya AA, Wang CC. Gene regulation in Giardia lambia involves a putative microRNA derived from a small nucleolar RNA. PLoS Negl Trop Dis 2011;5:e1338. [PMID: 22028939 PMCID: PMC3196473 DOI: 10.1371/journal.pntd.0001338] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2011] [Accepted: 08/15/2011] [Indexed: 12/21/2022]  Open
30
Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE. Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles. Genome Res 2011;21:1462-77. [PMID: 21685128 PMCID: PMC3166831 DOI: 10.1101/gr.121426.111] [Citation(s) in RCA: 144] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2011] [Accepted: 06/08/2011] [Indexed: 11/24/2022]
31
Ishizu H, Nagao A, Siomi H. Gatekeepers for Piwi-piRNA complexes to enter the nucleus. Curr Opin Genet Dev 2011;21:484-90. [PMID: 21764576 DOI: 10.1016/j.gde.2011.05.001] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2011] [Accepted: 05/21/2011] [Indexed: 01/05/2023]
32
Xiong J, Yuan D, Fillingham JS, Garg J, Lu X, Chang Y, Liu Y, Fu C, Pearlman RE, Miao W. Gene network landscape of the ciliate Tetrahymena thermophila. PLoS One 2011;6:e20124. [PMID: 21637855 PMCID: PMC3102692 DOI: 10.1371/journal.pone.0020124] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2011] [Accepted: 04/13/2011] [Indexed: 01/03/2023]  Open
33
Aldag I, Bockau U, Rossdorf J, Laarmann S, Raaben W, Herrmann L, Weide T, Hartmann MWW. Expression, secretion and surface display of a human alkaline phosphatase by the ciliate Tetrahymena thermophila. BMC Biotechnol 2011;11:11. [PMID: 21281462 PMCID: PMC3042934 DOI: 10.1186/1472-6750-11-11] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2010] [Accepted: 01/31/2011] [Indexed: 01/31/2023]  Open
34
Modulating somatic DNA copy number through maternal RNA. Proc Natl Acad Sci U S A 2010;107:21951-2. [PMID: 21149732 DOI: 10.1073/pnas.1017135108] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]  Open
35
Rautian MS. Molecular genome organization in ciliates. RUSS J GENET+ 2010. [DOI: 10.1134/s1022795410090115] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
36
Silencing USP22 by asymmetric structure of interfering RNA inhibits proliferation and induces cell cycle arrest in bladder cancer cells. Mol Cell Biochem 2010;346:11-21. [PMID: 20824490 DOI: 10.1007/s11010-010-0585-4] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2010] [Accepted: 08/28/2010] [Indexed: 10/19/2022]
37
Matsuda A, Shieh AWY, Chalker DL, Forney JD. The conjugation-specific Die5 protein is required for development of the somatic nucleus in both Paramecium and Tetrahymena. EUKARYOTIC CELL 2010;9:1087-99. [PMID: 20495055 PMCID: PMC2901671 DOI: 10.1128/ec.00379-09] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2009] [Accepted: 05/14/2010] [Indexed: 02/02/2023]
38
Steinel NC, Brady BL, Carpenter AC, Yang-Iott KS, Bassing CH. Posttranscriptional silencing of VbetaDJbetaCbeta genes contributes to TCRbeta allelic exclusion in mammalian lymphocytes. THE JOURNAL OF IMMUNOLOGY 2010;185:1055-62. [PMID: 20562258 DOI: 10.4049/jimmunol.0903099] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
39
Braun L, Cannella D, Ortet P, Barakat M, Sautel CF, Kieffer S, Garin J, Bastien O, Voinnet O, Hakimi MA. A complex small RNA repertoire is generated by a plant/fungal-like machinery and effected by a metazoan-like Argonaute in the single-cell human parasite Toxoplasma gondii. PLoS Pathog 2010;6:e1000920. [PMID: 20523899 PMCID: PMC2877743 DOI: 10.1371/journal.ppat.1000920] [Citation(s) in RCA: 94] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2010] [Accepted: 04/23/2010] [Indexed: 12/21/2022]  Open
40
Cheng CY, Vogt A, Mochizuki K, Yao MC. A domesticated piggyBac transposase plays key roles in heterochromatin dynamics and DNA cleavage during programmed DNA deletion in Tetrahymena thermophila. Mol Biol Cell 2010;21:1753-62. [PMID: 20357003 PMCID: PMC2869380 DOI: 10.1091/mbc.e09-12-1079] [Citation(s) in RCA: 116] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]  Open
41
Whole chromosome elimination and chromosome terminus elimination both contribute to somatic differentiation in Taiwanese hagfish Paramyxine sheni. Chromosome Res 2010;18:383-400. [DOI: 10.1007/s10577-010-9122-2] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2009] [Accepted: 01/15/2010] [Indexed: 10/19/2022]
42
Sidahmed AME, Wilkie B. Endogenous antiviral mechanisms of RNA interference: a comparative biology perspective. Methods Mol Biol 2010;623:3-19. [PMID: 20217541 DOI: 10.1007/978-1-60761-588-0_1] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
43
Huvos P. Varied truncation and clustering characterize some short repeats identified in micronucleus-specific DNA of Tetrahymena thermophila. Gene 2009;448:174-9. [PMID: 19619624 DOI: 10.1016/j.gene.2009.07.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2009] [Revised: 07/07/2009] [Accepted: 07/12/2009] [Indexed: 10/20/2022]
44
Dave D, Wloga D, Gaertig J. Manipulating ciliary protein-encoding genes in Tetrahymena thermophila. Methods Cell Biol 2009;93:1-20. [PMID: 20409809 DOI: 10.1016/s0091-679x(08)93001-6] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
45
Motl JA, Chalker DL. Subtraction by addition: domesticated transposases in programmed DNA elimination. Genes Dev 2009;23:2455-60. [PMID: 19884252 DOI: 10.1101/gad.1864609] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
46
Claycomb JM, Batista PJ, Pang KM, Gu W, Vasale JJ, van Wolfswinkel JC, Chaves DA, Shirayama M, Mitani S, Ketting RF, Conte D, Mello CC. The Argonaute CSR-1 and its 22G-RNA cofactors are required for holocentric chromosome segregation. Cell 2009;139:123-34. [PMID: 19804758 DOI: 10.1016/j.cell.2009.09.014] [Citation(s) in RCA: 346] [Impact Index Per Article: 21.6] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2009] [Revised: 07/01/2009] [Accepted: 09/11/2009] [Indexed: 12/11/2022]
47
Programmed loss of millions of base pairs from a vertebrate genome. Proc Natl Acad Sci U S A 2009;106:11212-7. [PMID: 19561299 DOI: 10.1073/pnas.0902358106] [Citation(s) in RCA: 111] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]  Open
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Patrushev LI, Minkevich IG. The problem of the eukaryotic genome size. BIOCHEMISTRY (MOSCOW) 2009;73:1519-52. [PMID: 19216716 DOI: 10.1134/s0006297908130117] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Grant-Downton R, Hafidh S, Twell D, Dickinson HG. Small RNA pathways are present and functional in the angiosperm male gametophyte. MOLECULAR PLANT 2009;2:500-12. [PMID: 19825633 DOI: 10.1093/mp/ssp003] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
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Kurth HM, Mochizuki K. 2'-O-methylation stabilizes Piwi-associated small RNAs and ensures DNA elimination in Tetrahymena. RNA (NEW YORK, N.Y.) 2009;15:675-85. [PMID: 19240163 PMCID: PMC2661841 DOI: 10.1261/rna.1455509] [Citation(s) in RCA: 117] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2008] [Accepted: 12/17/2008] [Indexed: 05/23/2023]
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