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Jelocnik M, White RT, Clune T, O'Connell J, Foxwell J, Hair S, Besier S, Tom L, Phillips N, Robbins A, Bogema D, Vaz PK, Legione AR, Jenkins C, Jacobson C. Molecular characterisation of the Australian and New Zealand livestock Chlamydia pecorum strains confirms novel but clonal ST23 in association with ovine foetal loss. Vet Microbiol 2023; 283:109774. [PMID: 37216721 DOI: 10.1016/j.vetmic.2023.109774] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2022] [Revised: 05/07/2023] [Accepted: 05/09/2023] [Indexed: 05/24/2023]
Abstract
Chlamydia pecorum is a veterinary pathogen associated with abortions and perinatal mortality in sheep. Recent studies investigating foetal and perinatal lamb mortality in sheep from Australia and New Zealand identified C. pecorum clonal sequence type (ST)23 strains in aborted and stillborn lambs. Presently, there is limited genotypic information on C. pecorum strains associated with reproductive disease, although whole genome sequencing (WGS) of one abortigenic ST23 C. pecorum strain identified unique features, including a deletion in the CDS1 locus of the chlamydial plasmid. We applied WGS on two ST23 strains detected in aborted and stillborn lambs from Australia and used phylogenetic and comparative analyses to compare these to the other available C. pecorum genomes. To re-evaluate the genetic diversity of contemporary strains, we applied C. pecorum genotyping, and chlamydial plasmid sequencing to a range of C. pecorum positive samples and isolates from ewes, aborted foetuses and stillborn lambs, cattle and a goat from diverse geographical regions across Australia and New Zealand.The two new C. pecorum genomes are nearly identical to the genome of the Australian abortigenic strain including the unique deletion in the chlamydial plasmid. Genotyping revealed that these novel C. pecorum ST23 strains are widespread and associated with sheep abortions on Australian and New Zealand farms. In addition, a goat C. pecorum strain (denoted ST 304) from New Zealand was also characterised. This study expands the C. pecorum genome catalogue and describes a comprehensive molecular characterisation of the novel livestock ST23 strains associated with foetal and lamb mortality.
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Affiliation(s)
- Martina Jelocnik
- University of the Sunshine Coast, Centre for Bioinnovation, Sippy Downs, Sunshine Coast, Queensland 4557, Australia.
| | - Rhys T White
- University of the Sunshine Coast, Centre for Bioinnovation, Sippy Downs, Sunshine Coast, Queensland 4557, Australia; The University of Queensland, School of Chemistry and Molecular Biosciences, Australian Infectious Disease Research Centre, Brisbane, Queensland 4072, Australia; The University of Queensland, Australian Centre for Ecogenomics, Brisbane, Queensland 4072, Australia.
| | - Tom Clune
- Murdoch University, Centre for Animal Production and Health, Perth, Western Australia 6150, Australia.
| | - John O'Connell
- Ministry for Primary Industries, Diagnostic and Surveillance Services Directorate, Upper Hutt 5140, New Zealand. john.o'
| | - Jonathan Foxwell
- Animal Health Laboratory, Ministry for Primary Industries, 66 Ward Street, Upper Hutt 5018, New Zealand.
| | - Sam Hair
- Department of Primary Industries and Regional Development, South Perth, WA 6151, Australia.
| | - Shane Besier
- Department of Primary Industries and Regional Development, South Perth, WA 6151, Australia.
| | - La Tom
- Murdoch University, Centre for Animal Production and Health, Perth, Western Australia 6150, Australia.
| | - Nyree Phillips
- Murdoch University, Centre for Animal Production and Health, Perth, Western Australia 6150, Australia.
| | - Amy Robbins
- University of the Sunshine Coast, Centre for Bioinnovation, Sippy Downs, Sunshine Coast, Queensland 4557, Australia.
| | - Daniel Bogema
- NSW Department of Primary Industries, Elizabeth Macarthur Agricultural Institute, Menangle, New South Wales 2568, Australia.
| | - Paola K Vaz
- The University of Melbourne, Melbourne Veterinary School, Asia Pacific Centre for Animal Health, Parkville, Victoria 3010, Australia.
| | - Alistair R Legione
- The University of Melbourne, Melbourne Veterinary School, Asia Pacific Centre for Animal Health, Parkville, Victoria 3010, Australia.
| | - Cheryl Jenkins
- NSW Department of Primary Industries, Elizabeth Macarthur Agricultural Institute, Menangle, New South Wales 2568, Australia.
| | - Caroline Jacobson
- Murdoch University, Centre for Animal Production and Health, Perth, Western Australia 6150, Australia.
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Clune T, Bruce M, Glanville E, Campbell AJD, Lockwood A, Hancock S, Thompson AN, Beetson S, Brookes D, Trengove C, O'Handley R, Jacobson C. Seropositivity to
Campylobacter
and association with abortion and lamb mortality in maiden ewes from Western Australia, South Australia and Victoria. Aust Vet J 2022; 100:397-406. [PMID: 35665919 PMCID: PMC9544749 DOI: 10.1111/avj.13173] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2022] [Revised: 04/27/2022] [Accepted: 05/01/2022] [Indexed: 11/29/2022]
Abstract
This case‐control study investigated associations between Campylobacter fetus or Campylobacter jejuni titre and reproductive outcomes in 22 flocks of Merino and non‐Merino maiden ewes aged 1–2 years old. Campylobacter titres were also determined for multiparous ewes aged 3 years or older on the same farms. C. fetus ‘positivity’ (titre ≥1:80) was detected for 12% (57/462; 95% confidence interval [95% CI] 9.6 to 15.6) of maiden ewes and 31% (65/210; 95% CI 25.0 to 37.4) of mature ewes. The odds for failing to rear a lamb in C. fetus‐‘exposed’ maiden ewes (titre ≥1:10) was 2.01 times that of seronegative ewes (95% CI 1.09 to 3.77; P = 0.027), but there was no association between C. fetus‐‘positivity’ (titre ≥1:80) and failure to rise (OR 1.69; 95% CI 0.77 to 3.76; P = 0.191). C. fetus abortions were confirmed with microbial culture in one maiden ewe flock. In this flock, C. fetus titres fluctuated and often waned by lamb marking, highlighting the value of necropsies during abortion investigations. C. jejuni‐‘positivity’ (titre ≥1:80) was detected for 44% (204/462; 95% CI 39.7 to 48.7) maiden ewes, but odds of failing to rear were decreased for C. jejuni‐‘positive’ ewes (OR 0.52; 95% CI 0.32 to 0.83; P = 0.007). The association between Campylobacter serology and the reproductive outcome was inconsistent in these flocks. Serology should be considered in the context of other risk factors and used in conjunction with other strategies to investigate the impact of Campylobacter exposure on ewe reproductive performance such as monitoring for abortions and lamb necropsies to determine aetiological diagnosis, and vaccination trials.
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Affiliation(s)
- T Clune
- Centre for Animal Production and Health, Food Futures Institute Murdoch University South Street Murdoch Western Australia 6150 Australia
| | - M Bruce
- Centre for Biosecurity and One Health, Harry Butler Institute Murdoch University South Street Murdoch Western Australia 6150 Australia
| | - E Glanville
- Mackinnon Project, Faculty of Veterinary and Agricultural Sciences University of Melbourne Werribee Victoria 3030 Australia
| | - AJD Campbell
- Nossal Institute for Global Health, Melbourne School of Population and Global Health University of Melbourne Melbourne Victoria 3010 Australia
| | - A Lockwood
- Centre for Animal Production and Health, Food Futures Institute Murdoch University South Street Murdoch Western Australia 6150 Australia
| | - S Hancock
- Centre for Animal Production and Health, Food Futures Institute Murdoch University South Street Murdoch Western Australia 6150 Australia
| | - AN Thompson
- Centre for Animal Production and Health, Food Futures Institute Murdoch University South Street Murdoch Western Australia 6150 Australia
| | - S Beetson
- Centre for Animal Production and Health, Food Futures Institute Murdoch University South Street Murdoch Western Australia 6150 Australia
| | - D Brookes
- Mackinnon Project, Faculty of Veterinary and Agricultural Sciences University of Melbourne Werribee Victoria 3030 Australia
| | - C Trengove
- School of Animal and Veterinary Sciences University of Adelaide Roseworthy South Australia 5371 Australia
| | - R O'Handley
- School of Animal and Veterinary Sciences University of Adelaide Roseworthy South Australia 5371 Australia
| | - C Jacobson
- Centre for Animal Production and Health, Food Futures Institute Murdoch University South Street Murdoch Western Australia 6150 Australia
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Clune T, Lockwood A, Hancock S, Thompson AN, Bruce M, Beetson S, Campbell AJ, Glanville E, Brookes D, Trengove C, O’Handley R, Jacobson C. Toxoplasma gondii is not an important contributor to poor reproductive performance of primiparous ewes from southern Australia: a prospective cohort study. BMC Vet Res 2022; 18:109. [PMID: 35305646 PMCID: PMC8933891 DOI: 10.1186/s12917-022-03211-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2021] [Accepted: 03/10/2022] [Indexed: 11/15/2022] Open
Abstract
Background Toxoplasma gondii causes reproductive losses in sheep worldwide, including Australia. The reproductive performance of primiparous ewes is typically lower than for mature, multiparous ewes, and younger ewes are more likely to be immunologically naïve and therefore more susceptible to reproductive disease if T. gondii infection occurs during pregnancy. The aim of this study was to assess the impact of infection with T. gondii on the reproductive performance of primiparous ewes in southern Australia using a prospective cohort study. This will inform the need for targeted control strategies for T. gondii in Australian sheep. Results Toxoplasma gondii seropositivity using indirect ELISA was detected at 16/28 farms located across southern Australia. Apparent seropositivity to T. gondii was lower in primiparous ewes (1.1, 95% confidence interval (CI) 0.6, 1.8) compared to mature, multiparous ewes (8.1, 95% CI 6.0, 10.5; P < 0.001). Toxoplasma gondii seroconversion during the gestation and lambing period was confirmed for 11/1097 (1.0, 95% CI 0.5, 1.7) of pregnant primiparous ewes that failed to raise a lamb, and 1/161 (0.6, 95% CI 0.1, 2.9) primiparous ewes with confirmed mid-pregnancy abortion. Conclusions Low frequency of detection of T. gondii seroconversion during gestation and low frequency of seropositivity to T. gondii suggests that toxoplasmosis was not an important contributor to reproductive losses in primiparous ewes on farms located over a wide geographical area in southern Australia. Supplementary Information The online version contains supplementary material available at 10.1186/s12917-022-03211-w.
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Abortion and Lamb Mortality between Pregnancy Scanning and Lamb Marking for Maiden Ewes in Southern Australia. Animals (Basel) 2021; 12:ani12010010. [PMID: 35011116 PMCID: PMC8749747 DOI: 10.3390/ani12010010] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2021] [Revised: 11/24/2021] [Accepted: 11/29/2021] [Indexed: 12/01/2022] Open
Abstract
Simple Summary The reproductive efficiency of ewes in their first breeding season (maiden ewes) can be inconsistent and disappointing. The frequency of abortion and its relative contribution to lamb losses in maiden ewe flocks in Australia has not been well studied. This study measured abortion and lamb mortality occurring between pregnancy diagnosis (scanning) and lamb marking in 30 flocks of maiden ewes on Australian sheep farms. The study included flocks of ewe lambs that had lambed for the first time at approximately one-year-old (n = 19) and two-tooth ewes that had lambed for the first time at two-years-old (n = 11). Abortion was detected in 14/19 flocks of ewe lambs and 6/11 flocks of two-tooth ewes using repeated scans. On average 5.7% of ewe lambs and 0.9% of two-tooth ewes aborted; however, abortion rates between flocks ranged from 0–50% for ewe lambs and 0–4.4% for two-tooth ewes. Lamb mortality from birth to marking represented the greatest contributor to overall lamb mortality occurring after pregnancy scanning but abortions were an important contributor to the overall losses in some ewe lamb flocks. This study highlights the variability in reproductive performance for maiden ewes and indicates that addressing losses due to abortion may improve reproductive performance in some ewe lamb flocks. Abstract The contribution of abortions to the overall mortality of lambs born to maiden (primiparous) ewes in Australia remains unclear. This cohort study aimed to quantify abortion and lamb mortality for ewe lambs and maiden Merino two-tooth ewes. Lamb mortality from pregnancy scanning to marking were determined for 19 ewe lamb and 11 Merino two-tooth ewe flocks across southern Australia. Average lamb mortality from scanning to marking was 35.8% (range 14.3–71.1%) for the ewe lambs and 29.4% (range 19.7–52.7%) for the two-tooth ewes. Mid-pregnancy abortion was detected in 5.7% of ewes (range 0–50%) in the ewe lamb flocks and 0.9% of ewes (range 0–4.4%) in the two-tooth ewe flocks. Mid-pregnancy abortion affecting ≥2% of ewes was observed in 6/19 ewe lamb flocks and 2/11 two-tooth ewe flocks. Lamb mortality from birth to marking represented the greatest contributor to foetal and lamb mortality after scanning, but mid-pregnancy abortion was an important contributor to lamb mortality in some ewe lamb flocks. Variability between the flocks indicates scope to improve the overall reproductive performance for maiden ewes by reducing foetal and lamb losses. Addressing mid-pregnancy abortion may improve the reproductive performance in some flocks.
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Clune T, Lockwood A, Hancock S, Thompson AN, Beetson S, Bruce M, Campbell AJ, Glanville E, Brookes D, Trengove C, O'Handley R, Jacobson C. Seropositivity to Coxiella burnetii in primiparous and multiparous ewes from southern Australia: A cross-sectional study. Comp Immunol Microbiol Infect Dis 2021; 80:101727. [PMID: 34875542 DOI: 10.1016/j.cimid.2021.101727] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2021] [Revised: 11/23/2021] [Accepted: 11/24/2021] [Indexed: 11/26/2022]
Abstract
The role of infectious diseases including coxiellosis in causing poorer reproductive performance of primiparous ewes are not well studied. The aims of this study were to determine if natural exposure to Coxiella burnetii is widespread in breeding ewes and whether seropositivity is associated with poor reproductive performance of primiparous ewes. Seropositivity to Coxiella burnetii was 0.08% (CI95% 0.01, 0.36) in primiparous ewes and 0.36% (CI95% 0.07, 1.14) in mature ewes. Coxiella burnetii was not detected in aborted or stillborn lambs using qPCR. These findings suggest C. burnetii infection was unlikely to be an important contributor to abortion and perinatal mortalities observed for primiparous ewe flocks, and exposure to C. burnetii was not widespread in ewes on farms located over wide geographical region of southern Australia. Whilst ewes on these farms were not an important reservoir for C. burnetii, sporadic zoonotic transmission from sheep is reported and has public health implications.
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Affiliation(s)
- Tom Clune
- Centre for Animal Production and Health, Food Futures Institute, Murdoch University, South Street, Murdoch, Western Australia 6150, Australia
| | - Amy Lockwood
- Centre for Animal Production and Health, Food Futures Institute, Murdoch University, South Street, Murdoch, Western Australia 6150, Australia
| | - Serina Hancock
- Centre for Animal Production and Health, Food Futures Institute, Murdoch University, South Street, Murdoch, Western Australia 6150, Australia
| | - Andrew N Thompson
- Centre for Animal Production and Health, Food Futures Institute, Murdoch University, South Street, Murdoch, Western Australia 6150, Australia
| | - Sue Beetson
- Centre for Animal Production and Health, Food Futures Institute, Murdoch University, South Street, Murdoch, Western Australia 6150, Australia
| | - Mieghan Bruce
- Centre for Animal Production and Health, Food Futures Institute, Murdoch University, South Street, Murdoch, Western Australia 6150, Australia; Centre for Biosecurity and One Health, Harry Butler Institute, Murdoch University, South Street, Murdoch, Western Australia 6150, Australia
| | - Angus J Campbell
- Nossal Institute for Global Health, Melbourne School of Population and Global Health, University of Melbourne, Victoria 3010, Australia; Mackinnon Project, Faculty of Veterinary & Agricultural Sciences, University of Melbourne, Werribee, Victoria 3030, Australia
| | - Elsa Glanville
- Mackinnon Project, Faculty of Veterinary & Agricultural Sciences, University of Melbourne, Werribee, Victoria 3030, Australia
| | - Daniel Brookes
- Mackinnon Project, Faculty of Veterinary & Agricultural Sciences, University of Melbourne, Werribee, Victoria 3030, Australia
| | - Colin Trengove
- School of Animal and Veterinary Science, Adelaide University, Roseworthy, South Australia 5371, Australia
| | - Ryan O'Handley
- School of Animal and Veterinary Science, Adelaide University, Roseworthy, South Australia 5371, Australia
| | - Caroline Jacobson
- Centre for Animal Production and Health, Food Futures Institute, Murdoch University, South Street, Murdoch, Western Australia 6150, Australia.
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Real-Time Fluorometric Isothermal LAMP Assay for Detection of Chlamydia pecorum in Rapidly Processed Ovine Abortion Samples: A Veterinary Practitioner's Perspective. Pathogens 2021; 10:pathogens10091157. [PMID: 34578188 PMCID: PMC8470028 DOI: 10.3390/pathogens10091157] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2021] [Revised: 09/02/2021] [Accepted: 09/06/2021] [Indexed: 02/07/2023] Open
Abstract
Traditional methods of detecting Chlamydia pecorum in tissue samples such as polymerase chain reaction or cell culture are laborious and costly. We evaluated the use of a previously developed C. pecorum LAMP assay using minimally processed ovine samples. Cotyledon (n = 16), foetal liver (n = 22), foetal lung (n = 2), and vaginal (n = 6) swabs, in addition to cotyledon (n = 6) and foetal liver (n = 8) tissue samples, were rapidly processed and used for LAMP testing without DNA extraction. Overall, LAMP test results were highly congruent with the in-house reference qPCR, with 80.43% (37/46; 72.73% positive agreement (PA); 84.75% negative agreement (NA)) overall agreeance for swab samples, and 85.71% (12/14; 80% PA; 88.89% NA) overall agreeance for tissue samples. Out of the 11 total discrepant results, discrepancy was mainly observed in samples (n = 10) with less than 100 copies/µL C. pecorum DNA. While sensitivity could be improved, the simplicity, low cost, and accuracy of detection makes this test amenable for use at point-of-care for detecting C. pecorum in sheep.
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Clune T, Besier S, Hair S, Hancock S, Lockwood A, Thompson A, Jelocnik M, Jacobson C. Chlamydia pecorum detection in aborted and stillborn lambs from Western Australia. Vet Res 2021; 52:84. [PMID: 34116730 PMCID: PMC8196467 DOI: 10.1186/s13567-021-00950-w] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2021] [Accepted: 05/18/2021] [Indexed: 12/26/2022] Open
Abstract
Lamb survival is an important welfare and productivity issue for sheep industries worldwide. Lower lamb survival has been reported for primiparous ewes, but the causes of this are not well studied. The aim of this study was to determine causes of perinatal deaths for lambs born to primiparous ewes in Western Australia, and identify if infectious diseases are implicated. Lamb mortality from birth to marking were determined for 11 primiparous ewe flocks on 10 farms in Western Australia. Lamb mortality from birth to marking averaged 14% for single-born and 26% for multiple-born lambs. Lamb necropsies (n = 298) identified starvation–mismosthering–exposure (34%), dystocia (24%) and stillbirth (15%) as the most common causes of perinatal lamb death. There was no evidence of exotic abortigenic pathogens in aborted and stillborn lambs (n = 35). Chlamydia pecorum was detected by qPCR in 15/35 aborted and stillborn lambs on 5/6 farms. Preliminary molecular characterisation of C. pecorum detected in samples from aborted and stillborn lambs (n = 8) using both Multilocus Sequence Typing and ompA genotyping indicated all strains were genetically identical to previously described pathogenic livestock strains, denoted ST23, and dissimilar to gastrointestinal strains. High frequency of detection of a pathogenic C. pecorum strains ST23 associated with ovine abortion and stillbirth on multiple farms located across a wide geographic area has not been previously reported. Chlamydia pecorum may contribute to reproductive wastage for primiparous sheep in Western Australia. Further investigation to understand C. pecorum epidemiology and impact on sheep reproduction is warranted.
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Affiliation(s)
- Tom Clune
- Centre for Animal Production and Health, Murdoch University, South Street, Murdoch, WA, 6150, Australia
| | - Shane Besier
- Department of Primary Industries and Regional Development, South Perth, WA, 6151, Australia
| | - Sam Hair
- Department of Primary Industries and Regional Development, South Perth, WA, 6151, Australia
| | - Serina Hancock
- Centre for Animal Production and Health, Murdoch University, South Street, Murdoch, WA, 6150, Australia
| | - Amy Lockwood
- Centre for Animal Production and Health, Murdoch University, South Street, Murdoch, WA, 6150, Australia
| | - Andrew Thompson
- Centre for Animal Production and Health, Murdoch University, South Street, Murdoch, WA, 6150, Australia
| | - Martina Jelocnik
- Genecology Research Centre, University of the Sunshine Coast, 90 Sippy Downs Drive, Sippy Downs, QLD, 4557, Australia
| | - Caroline Jacobson
- Centre for Animal Production and Health, Murdoch University, South Street, Murdoch, WA, 6150, Australia.
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