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Song X, Zhang F, Tao X, Li Y, Fan T, Wu J, Ma L, Liu L, Pu Y, Wang W, Yang G, Sun W. Cloning and Functional Analysis of Glyoxalase I Gene BrGLYI 13 in Brassica rapa L. Int J Mol Sci 2025; 26:2737. [PMID: 40141379 PMCID: PMC11942965 DOI: 10.3390/ijms26062737] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2025] [Revised: 03/11/2025] [Accepted: 03/14/2025] [Indexed: 03/28/2025] Open
Abstract
Glyoxalase I (GLYI) is a key enzyme that detoxifies methylglyoxal, a toxic byproduct of glycolysis, and is essential for plant pollination. However, the genome-wide identification and functional analysis of GLYI in Brassica rapa L. (B. rapa) remain limited. This study identified 17 BrGLYI genes (BrGLYI1-BrGLYI17) from the B. rapa genome. The self-compatible line 039-1 and the self-incompatible line GAU-28-5 were used as experimental materials, and Real-Time Quantitative Reverse Transcription PCR (RT-qPCR) was performed to examine the effect of BrGLYI genes on self-compatibility in winter B. rapa. Preliminary results showed that BrGLYI13 exhibited significant tissue specificity, with higher expression in the flowers of 039-1 compared to GAU-28-5. The open reading frame of BrGLYI13 (852 bp) was cloned from both 039-1 and GAU-28-5 cDNA, with no base mutations observed between the two lines. RT-qPCR revealed higher BrGLYI13 expression in the stigma of 039-1 compared to GAU-28-5. Based on the functional conservation and sequence homology, BrGLYI13 is speculated to play a similar role to that of AtGLYI3 in methylglyoxal detoxification and stress response. Furthermore, the knockout of AtGLYI3 resulted in reduced silique lengths and seed numbers. These findings suggest that BrGLYI13 is involved in the self-compatibility response in B. rapa and promotes the silique length and seed number in the Arabidopsis mutant, providing a basis for further research on the mechanisms of self-compatibility in B. rapa.
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Affiliation(s)
- Xiaojia Song
- College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (X.S.); (F.Z.); (X.T.); (Y.L.); (T.F.); (J.W.); (Y.P.)
- State Key Laboratory of Arid Land Crop Science, Lanzhou 730070, China; (L.M.); (L.L.)
| | - Feng Zhang
- College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (X.S.); (F.Z.); (X.T.); (Y.L.); (T.F.); (J.W.); (Y.P.)
- State Key Laboratory of Arid Land Crop Science, Lanzhou 730070, China; (L.M.); (L.L.)
| | - Xiaolei Tao
- College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (X.S.); (F.Z.); (X.T.); (Y.L.); (T.F.); (J.W.); (Y.P.)
- State Key Laboratory of Arid Land Crop Science, Lanzhou 730070, China; (L.M.); (L.L.)
| | - Yapeng Li
- College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (X.S.); (F.Z.); (X.T.); (Y.L.); (T.F.); (J.W.); (Y.P.)
- State Key Laboratory of Arid Land Crop Science, Lanzhou 730070, China; (L.M.); (L.L.)
| | - Tingting Fan
- College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (X.S.); (F.Z.); (X.T.); (Y.L.); (T.F.); (J.W.); (Y.P.)
- State Key Laboratory of Arid Land Crop Science, Lanzhou 730070, China; (L.M.); (L.L.)
| | - Junyan Wu
- College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (X.S.); (F.Z.); (X.T.); (Y.L.); (T.F.); (J.W.); (Y.P.)
- State Key Laboratory of Arid Land Crop Science, Lanzhou 730070, China; (L.M.); (L.L.)
| | - Li Ma
- State Key Laboratory of Arid Land Crop Science, Lanzhou 730070, China; (L.M.); (L.L.)
| | - Lijun Liu
- State Key Laboratory of Arid Land Crop Science, Lanzhou 730070, China; (L.M.); (L.L.)
| | - Yuanyuan Pu
- College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (X.S.); (F.Z.); (X.T.); (Y.L.); (T.F.); (J.W.); (Y.P.)
- State Key Laboratory of Arid Land Crop Science, Lanzhou 730070, China; (L.M.); (L.L.)
| | - Wangtian Wang
- College of Life Science and Technology, Gansu Agricultural University, Lanzhou 730070, China;
| | - Gang Yang
- College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (X.S.); (F.Z.); (X.T.); (Y.L.); (T.F.); (J.W.); (Y.P.)
- State Key Laboratory of Arid Land Crop Science, Lanzhou 730070, China; (L.M.); (L.L.)
| | - Wancang Sun
- College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (X.S.); (F.Z.); (X.T.); (Y.L.); (T.F.); (J.W.); (Y.P.)
- State Key Laboratory of Arid Land Crop Science, Lanzhou 730070, China; (L.M.); (L.L.)
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Kumar P, Roy A, Mukul SJ, Singh AK, Singh DK, Nalli A, Banerjee P, Babu KSD, Raman B, Kruparani SP, Siddiqi I, Sankaranarayanan R. A translation proofreader of archaeal origin imparts multi-aldehyde stress tolerance to land plants. eLife 2024; 12:RP92827. [PMID: 38372335 PMCID: PMC10942605 DOI: 10.7554/elife.92827] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/20/2024] Open
Abstract
Aldehydes, being an integral part of carbon metabolism, energy generation, and signalling pathways, are ingrained in plant physiology. Land plants have developed intricate metabolic pathways which involve production of reactive aldehydes and its detoxification to survive harsh terrestrial environments. Here, we show that physiologically produced aldehydes, i.e., formaldehyde and methylglyoxal in addition to acetaldehyde, generate adducts with aminoacyl-tRNAs, a substrate for protein synthesis. Plants are unique in possessing two distinct chiral proofreading systems, D-aminoacyl-tRNA deacylase1 (DTD1) and DTD2, of bacterial and archaeal origins, respectively. Extensive biochemical analysis revealed that only archaeal DTD2 can remove the stable D-aminoacyl adducts on tRNA thereby shielding archaea and plants from these system-generated aldehydes. Using Arabidopsis as a model system, we have shown that the loss of DTD2 gene renders plants susceptible to these toxic aldehydes as they generate stable alkyl modification on D-aminoacyl-tRNAs, which are recycled only by DTD2. Bioinformatic analysis identifies the expansion of aldehyde metabolising repertoire in land plant ancestors which strongly correlates with the recruitment of archaeal DTD2. Finally, we demonstrate that the overexpression of DTD2 offers better protection against aldehydes than in wild type Arabidopsis highlighting its role as a multi-aldehyde detoxifier that can be explored as a transgenic crop development strategy.
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Affiliation(s)
- Pradeep Kumar
- CSIR–Centre for Cellular and Molecular BiologyHyderabadIndia
- Academy of Scientific and Innovative Research (AcSIR), CSIR–CCMB CampusHyderabadIndia
- Academy of Scientific and Innovative Research (AcSIR)GhaziabadIndia
| | - Ankit Roy
- CSIR–Centre for Cellular and Molecular BiologyHyderabadIndia
| | - Shivapura Jagadeesha Mukul
- CSIR–Centre for Cellular and Molecular BiologyHyderabadIndia
- Academy of Scientific and Innovative Research (AcSIR), CSIR–CCMB CampusHyderabadIndia
- Academy of Scientific and Innovative Research (AcSIR)GhaziabadIndia
| | | | | | - Aswan Nalli
- CSIR–Centre for Cellular and Molecular BiologyHyderabadIndia
| | | | | | | | | | - Imran Siddiqi
- CSIR–Centre for Cellular and Molecular BiologyHyderabadIndia
- Academy of Scientific and Innovative Research (AcSIR), CSIR–CCMB CampusHyderabadIndia
| | - Rajan Sankaranarayanan
- CSIR–Centre for Cellular and Molecular BiologyHyderabadIndia
- Academy of Scientific and Innovative Research (AcSIR), CSIR–CCMB CampusHyderabadIndia
- Academy of Scientific and Innovative Research (AcSIR)GhaziabadIndia
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Alam NB, Jain M, Mustafiz A. Pyramiding D-lactate dehydrogenase with the glyoxalase pathway enhances abiotic stress tolerance in plants. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 207:108391. [PMID: 38309183 DOI: 10.1016/j.plaphy.2024.108391] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2023] [Revised: 12/18/2023] [Accepted: 01/19/2024] [Indexed: 02/05/2024]
Abstract
Methylglyoxal is a common cytotoxic metabolite produced in plants during multiple biotic and abiotic stress. To mitigate the toxicity of MG, plants utilize the glyoxalase pathway comprising glyoxalase I (GLYI), glyoxalase II (GLYII), or glyoxalase III (GLYIII). GLYI and GLYII are the key enzymes of glyoxalase pathways that play an important role in abiotic stress tolerance. Earlier research showed that MG level is lower when both GLYI and GLYII are overexpressed together, compared to GLYI or GLYII single gene overexpressed transgenic plants. D-lactate dehydrogenase (D-LDH) is an integral part of MG detoxification which metabolizes the end product (D-lactate) of the glyoxalase pathway. In this study, two Arabidopsis transgenic lines were constructed using gene pyramiding technique: GLYI and GLYII overexpressed (G-I + II), and GLYI, GLYII, and D-LDH overexpressed (G-I + II + D) plants. G-I + II + D exhibits lower MG and D-lactate levels and enhanced abiotic stress tolerance than the G-I + II and wild-type plants. Further study explores the stress tolerance mechanism of G-I + II + D plants through the interplay of different regulators and plant hormones. This, in turn, modulates the expression of ABA-dependent stress-responsive genes like RAB18, RD22, and RD29B to generate adaptive responses during stress. Therefore, there might be a potential correlation between ABA and MG detoxification pathways. Furthermore, higher STY46, GPX3, and CAMTA1 transcripts were observed in G-I + II + D plants during abiotic stress. Thus, our findings suggest that G-I + II + D has significantly improved MG detoxification, reduced oxidative stress-induced damage, and provided a better protective mechanism against abiotic stresses than G-I + II or wild-type plants.
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Affiliation(s)
- Nazmir Binta Alam
- Plant Molecular Biology Laboratory, Faculty of Life Sciences and Biotechnology, South Asian University, New Delhi, 110068, India
| | - Muskan Jain
- Plant Molecular Biology Laboratory, Faculty of Life Sciences and Biotechnology, South Asian University, New Delhi, 110068, India
| | - Ananda Mustafiz
- Plant Molecular Biology Laboratory, Faculty of Life Sciences and Biotechnology, South Asian University, New Delhi, 110068, India.
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