Iron and callose homeostatic regulation in rice roots under low phosphorus

Regulation of iron homeostasis by IMA1 and bHLH104 under phosphate starvation in Arabidopsis

Phosphate (Pi) starvation disrupts iron (Fe) nutrition at phenotypic, physiological, and transcriptional levels. The alteration of Fe homeostasis plays an important role in the adaptive response to Pi starvation. However, utilizing the antagonistic mechanism between P and Fe nutrition to improve adaptation to Pi deficiency in plants still needs to be explored. Here, we constructed inducible and constitutive expression of Fe regulators IMA1 and bHLH104, driven by the CaMV 35S promoter and the promoters of Pi-starvation responsive genes (proIPS1 and proPHT1;4), respectively. The Fe regulators bHLH104 and IMA1 were successfully upregulated in a constitutive and inducible manner under Pi deficiency in these transgenic plants. Regardless of Pi condition, upregulation of bHLH104 and IMA1 had no significant influence on primary root length or root Fe distribution. Nevertheless, the upregulation of bHLH104 and IMA1 induced Fe accumulation in the shoots of transgenic plants, particularly under Pi deficiency. Correspondingly, shoot chlorophyll content increased under Fe deficiency in the transgenic plants. In addition, in situ FeIII distribution revealed that bHLH104 and IMA1 likely interfere with Fe distribution through different pathways. The inducible upregulation of IMA1 significantly led to shoot zinc (Zn) accumulation under Pi deficiency, while the inducible upregulation of bHLH104 resulted in a decrease in shoot Zn and manganese (Mn) contents. The enhancement of Fe and Zn accumulation under the inducible expression of IMA1 under Pi deficiency was attributed to the induction of high expression of key Fe-uptake genes FRO2 and IRT1. The expression of the Zn and Mn uptake genes was also affected in these transgenic plants, which correlated with the changes in Zn and Mn contents. Overall, IMA1 is an excellent candidate for enhancing plant Fe and Zn accumulation and can be specifically induced under conditions of Pi deficiency.

An intron-split microRNA mediates cleavage of the mRNA encoded by low phosphate root in Solanaceae

MAIN CONCLUSION

A microRNA with a non-canonical precursor structure harbours an intron in between its miRNA-5p and miRNA-3p relevant for its biogenesis, is conserved across Solanaceae, and targets the mRNA of low phosphate root. Hundreds of miRNAs have been identified in plants and great advances have been accomplished in the understanding of plant miRNA biogenesis, mechanisms and functions. Still, many miRNAs, particularly those with less conventional features, remain to be discovered. Likewise, additional layers of regulation from miRNA generation to action and turnover are still being revealed. The current study describes a microRNA not previously identified given its unusual intron-split stem-loop structure, that has been previously observed only within the monocot-specific miRNA444 family. It shows its conservation across a branch of Solanales including agriculturally relevant Solanaceae family, where its transcripts had already been predicted in several species within sequence databases. The miRNA is absent in Arabidopsis thaliana but present in Solanum lycopersicum, Nicotiana benthamiana, Petunia axillaris, and Ipomoea nil. It proves that at least two different pri-miRNA variants are produced from this miRNA gene, one spliced and the other one retaining the intron. It demonstrates the dual function of its intron in the miRNA biogenesis. On the one hand, its presence in the pri-miRNA positively influences mature miRNA accumulation, but on the other hand, it needs to be removed from the pri-miRNA for efficient mature miRNA production. Finally, it sets low phosphate root as one of its targets, a protein known to be involved in root growth regulation under phosphate starvation in other plant species.

The Phosphorus-Iron Nexus: Decoding the Nutrients Interaction in Soil and Plant

Phosphorus (P) and iron (Fe) are two essential mineral nutrients in plant growth. It is widely observed that interactions of P and Fe could influence their availability in soils and affect their homeostasis in plants, which has received significant attention in recent years. This review presents a summary of latest advances in the activation of insoluble Fe-P complexes by soil properties, microorganisms, and plants. Furthermore, we elucidate the physiological and molecular mechanisms underlying how plants adapt to Fe-P interactions. This review also discusses the current limitations and presents potential avenues for promoting sustainable agriculture through the optimization of P and Fe utilization efficiency in crops.

Physiological and molecular mechanisms of plant-root responses to iron toxicity

The chemical form and physiological activity of iron (Fe) in soil are dependent on soil pH and redox potential (Eh), and Fe levels in soils are frequently elevated to the point of causing Fe toxicity in plants, with inhibition of normal physiological activities and of growth and development. In this review, we describe how iron toxicity triggers important physiological changes, including nitric-oxide (NO)-mediated potassium (K+) efflux at the tips of roots and accumulation of reactive oxygen species (ROS) and reactive nitrogen (RNS) in roots, resulting in physiological stress. We focus on the root system, as the first point of contact with Fe in soil, and describe the key processes engaged in Fe transport, distribution, binding, and other mechanisms that are drawn upon to defend against high-Fe stress. We describe the root-system regulation of key physiological processes and of morphological development through signaling substances such as ethylene, auxin, reactive oxygen species, and nitric oxide, and discuss gene-expression responses under high Fe. We especially focus on studies on the physiological and molecular mechanisms in rice and Arabidopsis under high Fe, hoping to provide a valuable theoretical basis for improving the ability of crop roots to adapt to soil Fe toxicity.

Inhibitory effect of exogenous mineral elements (Si, P, Zn, Ca, Mn, Se, Fe, S) on rice Cd accumulation and soil Cd bioavailability in Cd-contaminated farmlands: A meta-analysis

A promising strategy for safely remediating Cd-contaminated farmland has been the application of mineral elements, which can reduce Cd accumulation in rice and inhibit its bioavailability in Cd-contaminated farmlands. However, there is still a lack of systematic and quantitative evaluations regarding how different mineral elements affect rice Cd accumulation and soil Cd bioavailability. Here, a meta-analysis was conducted based on 1062 individual observations from 137 published works to explore the effects of Si, P, Zn, Ca, Mn, Se, Fe and S in rice Cd accumulation and soil Cd bioavailability, we aimed to identify key factors that control the reduction of Cd concentration in rice grains. The results showed that the presence of exogenous elements had dramatically reduced rice grains Cd concentrations in the following decreasing order: Fe (43.03%) > P (38.45%) > Si (33.24%) > Ca (31.90%) > Se (29.83%) > Zn (25.95%) > Mn (23.26%) > S (18.78%). The elements of Ca, P and Si had strongly reduced Cd bioavailability in soils by 29.87%, 27.80% and 22.70%, respectively. The effects of these elements on Cd bioavailability appeared to be controlled by soil physio-chemical properties, such as pH, soil organic carbon (SOC) but also water management, application amounts and elemental forms. Overall, this study provides valuable insights into the potential of using exogenous mineral elements to mitigate Cd contamination in rice and farmlands, and facilitates the selection and application of mineral elements for the safe utilization of Cd-contaminated farmlands, taking into account soil properties and other factors that affect their effect.

Phosphate starvation: response mechanisms and solutions

Phosphorus is essential to plant growth and agricultural crop yields, yet the challenges associated with phosphorus fertilization in agriculture, such as aquatic runoff pollution and poor phosphorus bioavailability, are increasingly difficult to manage. Comprehensively understanding the dynamics of phosphorus uptake and signaling mechanisms will inform the development of strategies to address these issues. This review describes regulatory mechanisms used by specific tissues in the root apical meristem to sense and take up phosphate from the rhizosphere. The major regulatory mechanisms and related hormone crosstalk underpinning phosphate starvation responses, cellular phosphate homeostasis, and plant adaptations to phosphate starvation are also discussed, along with an overview of the major mechanism of plant systemic phosphate starvation responses. Finally, this review discusses recent promising genetic engineering strategies for improving crop phosphorus use and computational approaches that may help further design strategies for improved plant phosphate acquisition. The mechanisms and approaches presented include a wide variety of species including not only Arabidopsis but also crop species such as Oryza sativa (rice), Glycine max (soybean), and Triticum aestivum (wheat) to address both general and species-specific mechanisms and strategies. The aspects of phosphorus deficiency responses and recently employed strategies of improving phosphate acquisition that are detailed in this review may provide insights into the mechanisms or phenotypes that may be targeted in efforts to improve crop phosphorus content and plant growth in low phosphorus soils.

Phenotypes and Molecular Mechanisms Underlying the Root Response to Phosphate Deprivation in Plants

Phosphorus (P) is an essential macronutrient for plant growth. The roots are the main organ for nutrient and water absorption in plants, and they adapt to low-P soils by altering their architecture for enhancing absorption of inorganic phosphate (Pi). This review summarizes the physiological and molecular mechanisms underlying the developmental responses of roots to Pi starvation, including the primary root, lateral root, root hair, and root growth angle, in the dicot model plant Arabidopsis thaliana and the monocot model plant rice (Oryza sativa). The importance of different root traits and genes for breeding P-efficient roots in rice varieties for Pi-deficient soils are also discussed, which we hope will benefit the genetic improvement of Pi uptake, Pi-use efficiency, and crop yields.