Detecting COVID-19 in chest images based on deep transfer learning and machine learning algorithms

Prediction of malnutrition in kids by integrating ResNet-50-based deep learning technique using facial images

In recent times, severe acute malnutrition (SAM) in India is considered a serious issue as per UNICEF 2022 records. In that record, 35.5% of children under age 5 are stunted, 19.3% are wasted, and 32% are underweight. Malnutrition, defined as these three conditions, affects 5.7 million children globally. This research utilizes an artificial intelligence-based image segmentation technique to predict malnutrition in children. The primary goal of this research is to use a deep learning model to eliminate the need for multiple manual diagnostic tests and simplify the prediction of malnutrition in kids. The traditional model uses text-based data and takes more time with continuous monitoring of kids by analysing body mass index (BMI) over different periods. Children in rural areas often miss medical expert appointments, and a lack of knowledge among parents can lead to severe malnutrition. The aim of the proposed system is to eliminate the need for manual blood tests and regular visits to medical experts. This study uses the ResNet-50 deep learning model's built-in shortcut connection to solve the image-based vanishing gradient problem. This makes training more efficient for image segmentation tasks in predicting malnutrition. The model is 98.49% accurate in predicting the kids who are malnourished among the kids who are healthy. It is evident from the results that the proposed system serves better than other deep learning models, such as XG Boost (75.29% accuracy), VGG 16 (94% accuracy), Xception (95.41% accuracy), and MobileNet (92.42% accuracy). Hence, the proposed technique is effective in detecting malnutrition and diagnose it earlier, without using predictive analysis function or advice from the medical experts.

COVID-19 severity detection using chest X-ray segmentation and deep learning

COVID-19 has resulted in a significant global impact on health, the economy, education, and daily life. The disease can range from mild to severe, with individuals over 65 or those with underlying medical conditions being more susceptible to severe illness. Early testing and isolation are vital due to the virus's variable incubation period. Chest radiographs (CXR) have gained importance as a diagnostic tool due to their efficiency and reduced radiation exposure compared to CT scans. However, the sensitivity of CXR in detecting COVID-19 may be lower. This paper introduces a deep learning framework for accurate COVID-19 classification and severity prediction using CXR images. U-Net is used for lung segmentation, achieving a precision of 0.9924. Classification is performed using a Convulation-capsule network, with high true positive rates of 86% for COVID-19, 93% for pneumonia, and 85% for normal cases. Severity assessment employs ResNet50, VGG-16, and DenseNet201, with DenseNet201 showing superior accuracy. Empirical results, validated with 95% confidence intervals, confirm the framework's reliability and robustness. This integration of advanced deep learning techniques with radiological imaging enhances early detection and severity assessment, improving patient management and resource allocation in clinical settings.

Assessing risk factors for malnutrition among women in Bangladesh and forecasting malnutrition using machine learning approaches

BACKGROUND

This paper presents an in-depth examination of malnutrition in women in Bangladesh. Malnutrition in women is a major public health issue related to different diseases and has negative repercussions for children, such as premature birth, decreased infection resistance, and an increased risk of death. Moreover, malnutrition is a severe problem in Bangladesh. Data from the Bangladesh Demographic Health Survey (BDHS) conducted in 2017-18 was used to identify risk factors for malnourished women and to create a machine learning-based strategy to detect their nutritional status.

METHODS

A total of 17022 women participants are taken to conduct the research. All the participants are from different regions and different ages. A chi-square test with a five percent significance level is used to identify possible risk variables for malnutrition in women and six machine learning-based classifiers (Naïve Bayes, two types of Decision Tree, Logistic Regression, Random Forest, and Gradient Boosting Machine) were used to predict the malnutrition of women. The models are being evaluated using different parameters like accuracy, sensitivity, specificity, positive predictive value, negative predictive value, [Formula: see text] score, and area under the curve (AUC).

RESULTS

Descriptive data showed that 45% of the population studied were malnourished women, and the chi-square test illustrated that all fourteen variables are significantly associated with malnutrition in women and among them, age and wealth index had the most influence on their nutritional status, while water source had the least impact. Random Forest had an accuracy of 60% and 60.2% for training and test data sets, respectively. CART and Gradient Boosting Machine also had close accuracy like Random Forest but based on other performance metrics such as kappa and [Formula: see text] scores Random Forest got the highest rank among others. Also, it had the highest accuracy and [Formula: see text] scores in k-fold validation along with the highest AUC (0.604).

CONCLUSION

The Random Forest (RF) approach is a reasonably superior machine learning-based algorithm for forecasting women's nutritional status in Bangladesh in comparison to other ML algorithms investigated in this work. The suggested approach will aid in forecasting which women are at high susceptibility to malnutrition, hence decreasing the strain on the healthcare system.

Learning without forgetting by leveraging transfer learning for detecting COVID-19 infection from CT images

COVID-19, a global pandemic, has killed thousands in the last three years. Pathogenic laboratory testing is the gold standard but has a high false-negative rate, making alternate diagnostic procedures necessary to fight against it. Computer Tomography (CT) scans help diagnose and monitor COVID-19, especially in severe cases. But, visual inspection of CT images takes time and effort. In this study, we employ Convolution Neural Network (CNN) to detect coronavirus infection from CT images. The proposed study utilized transfer learning on the three pre-trained deep CNN models, namely VGG-16, ResNet, and wide ResNet, to diagnose and detect COVID-19 infection from the CT images. However, when the pre-trained models are retrained, the model suffers the generalization capability to categorize the data in the original datasets. The novel aspect of this work is the integration of deep CNN architectures with Learning without Forgetting (LwF) to enhance the model's generalization capabilities on both trained and new data samples. The LwF makes the network use its learning capabilities in training on the new dataset while preserving the original competencies. The deep CNN models with the LwF model are evaluated on original images and CT scans of individuals infected with Delta-variant of the SARS-CoV-2 virus. The experimental results show that of the three fine-tuned CNN models with the LwF method, the wide ResNet model's performance is superior and effective in classifying original and delta-variant datasets with an accuracy of 93.08% and 92.32%, respectively.

Computer-aided diagnostic for classifying chest X-ray images using deep ensemble learning

BACKGROUND

Nowadays doctors and radiologists are overwhelmed with a huge amount of work. This led to the effort to design different Computer-Aided Diagnosis systems (CAD system), with the aim of accomplishing a faster and more accurate diagnosis. The current development of deep learning is a big opportunity for the development of new CADs. In this paper, we propose a novel architecture for a convolutional neural network (CNN) ensemble for classifying chest X-ray (CRX) images into four classes: viral Pneumonia, Tuberculosis, COVID-19, and Healthy. Although Computed tomography (CT) is the best way to detect and diagnoses pulmonary issues, CT is more expensive than CRX. Furthermore, CRX is commonly the first step in the diagnosis, so it's very important to be accurate in the early stages of diagnosis and treatment.

RESULTS

We applied the transfer learning technique and data augmentation to all CNNs for obtaining better performance. We have designed and evaluated two different CNN-ensembles: Stacking and Voting. This system is ready to be applied in a CAD system to automated diagnosis such a second or previous opinion before the doctors or radiology's. Our results show a great improvement, 99% accuracy of the Stacking Ensemble and 98% of accuracy for the the Voting Ensemble.

CONCLUSIONS

To minimize missclassifications, we included six different base CNN models in our architecture (VGG16, VGG19, InceptionV3, ResNet101V2, DenseNet121 and CheXnet) and it could be extended to any number as well as we expect extend the number of diseases to detected. The proposed method has been validated using a large dataset created by mixing several public datasets with different image sizes and quality. As we demonstrate in the evaluation carried out, we reach better results and generalization compared with previous works. In addition, we make a first approach to explainable deep learning with the objective of providing professionals more information that may be valuable when evaluating CRXs.

Machine learning approach for automated predicting of COVID-19 severity based on clinical and paraclinical characteristics: Serum levels of zinc, calcium, and vitamin D

Background & aims

Considering that no standard therapy has yet been found for the novel coronavirus disease (COVID-19), identifying severe cases as early as possible, and such that treatment procedures can be escalated seems necessary. Hence, the present study aimed to develop a machine learning (ML) approach for automated severity assessment of COVID-19 based on clinical and paraclinical characteristics like serum levels of zinc, calcium, and vitamin D.

Methods

In this analytical cross-sectional study which was conducted from May 2020 to May 2021, clinical and paraclinical data sets of COVID-19-positive patients with known outcomes were investigated by combining statistical comparison and correlation methods with ML algorithms, including Decision Tree (DT), Random Forest (RF), and Support Vector Machine (SVM).

Results

Our work revealed that some patients' characteristics including age, gender, cardiovascular diseases as an underlying condition, and anorexia as disease symptoms, and also some parameters which are measurable in blood samples including FBS and serum levels of calcium are factors that can be considered in predicting COVID-19 severity. In this regard, we developed ML predictive models that indicated accuracy and precision scores >90% for disease severity prediction. The SVM algorithm indicated better results than other algorithms by having a precision of 95.5%, recall of 94%, F1 score of 94.8%, the accuracy of 95%, and AUC of 94%.

Conclusions

Our results indicated that clinical and paraclinical features like calcium serum levels can be used for automated severity assessment of COVID-19.

Deep transfer learning to quantify pleural effusion severity in chest X-rays

PURPOSE

The detection of pleural effusion in chest radiography is crucial for doctors to make timely treatment decisions for patients with chronic obstructive pulmonary disease. We used the MIMIC-CXR database to develop a deep learning model to quantify pleural effusion severity in chest radiographs.

METHODS

The Medical Information Mart for Intensive Care Chest X-ray (MIMIC-CXR) dataset was divided into patients 'with' or 'without' chronic obstructive pulmonary disease (COPD). The label of pleural effusion severity was obtained from the extracted COPD radiology reports and classified into four categories: no effusion, small effusion, moderate effusion, and large effusion. A total of 200 datasets were randomly sampled to manually check each item and determine whether the tags are correct. A professional doctor re-tagged these items as a verification cohort without knowing their previous tags. The learning models include eight common network structures including Resnet, DenseNet, and GoogleNET. Three data processing methods (no sampling, downsampling, and upsampling) and two loss algorithms (focal loss and cross-entropy loss) were used for unbalanced data. The Neural Network Intelligence tool was applied to train the model. Receiver operating characteristic curves, Area under the curve, and confusion matrix were employed to evaluate the model results. Grad-CAM was used for model interpretation.

RESULTS

Among the 8533 patients, 15,620 chest X-rays with clearly marked pleural effusion severity were obtained (no effusion, 5685; small effusion, 4877; moderate effusion, 3657; and large effusion, 1401). The error rate of the manual check label was 6.5%, and the error rate of the doctor's relabeling was 11.0%. The highest accuracy rate of the optimized model was 73.07. The micro-average AUCs of the testing and validation cohorts was 0.89 and 0.90, respectively, and their macro-average AUCs were 0.86 and 0.89, respectively. The AUC of the distinguishing results of each class and the other three classes were 0.95 and 0.94, 0.76 and 0.83, 0.85 and 0.83, and 0.87 and 0.93.

CONCLUSION

The deep transfer learning model can grade the severity of pleural effusion.

Tracking and predicting COVID-19 radiological trajectory on chest X-rays using deep learning

Radiological findings on chest X-ray (CXR) have shown to be essential for the proper management of COVID-19 patients as the maximum severity over the course of the disease is closely linked to the outcome. As such, evaluation of future severity from current CXR would be highly desirable. We trained a repurposed deep learning algorithm on the CheXnet open dataset (224,316 chest X-ray images of 65,240 unique patients) to extract features that mapped to radiological labels. We collected CXRs of COVID-19-positive patients from an open-source dataset (COVID-19 image data collection) and from a multi-institutional local ICU dataset. The data was grouped into pairs of sequential CXRs and were categorized into three categories: ‘Worse’, ‘Stable’, or ‘Improved’ on the basis of radiological evolution ascertained from images and reports. Classical machine-learning algorithms were trained on the deep learning extracted features to perform immediate severity evaluation and prediction of future radiological trajectory. Receiver operating characteristic analyses and Mann-Whitney tests were performed. Deep learning predictions between “Worse” and “Improved” outcome categories and for severity stratification were significantly different for three radiological signs and one diagnostic (‘Consolidation’, ‘Lung Lesion’, ‘Pleural effusion’ and ‘Pneumonia’; all P < 0.05). Features from the first CXR of each pair could correctly predict the outcome category between ‘Worse’ and ‘Improved’ cases with a 0.81 (0.74–0.83 95% CI) AUC in the open-access dataset and with a 0.66 (0.67–0.64 95% CI) AUC in the ICU dataset. Features extracted from the CXR could predict disease severity with a 52.3% accuracy in a 4-way classification. Severity evaluation trained on the COVID-19 image data collection had good out-of-distribution generalization when testing on the local dataset, with 81.6% of intubated ICU patients being classified as critically ill, and the predicted severity was correlated with the clinical outcome with a 0.639 AUC. CXR deep learning features show promise for classifying disease severity and trajectory. Once validated in studies incorporating clinical data and with larger sample sizes, this information may be considered to inform triage decisions.

Effect of image transformation on EfficientNet model for COVID-19 CT image classification

The Novel Corona Virus 2019 has drastically affected millions of people all around the world and was a huge threat to the human race since its evolution in 2019. Chest CT images are considered to be one of the indicative sources for diagnosis of COVID-19 by most of the researchers in the research community. Several researchers have proposed various models for the prediction of COVID-19 using CT images using Artificial Intelligence based algorithms (Alimadadi e al., 2020 [19], Srinivasa Rao and Vazquez, 2020 [20], Vaishya et al., 2020 [21]). EfficientNet is one of the powerful Convolutional Neural Network models proposed by Tan and Le (2019). The objective of this study is to explore the effect of image enhancement algorithms such as Laplace transform, Wavelet transforms, Adaptive gamma correction and Contrast limited adaptive histogram equalization (CLAHE) on Chest CT images for the classification of Covid-19 using the EfficientNet algorithm. SARS- COV-2 (Soares et al., 2020) dataset is used in this study. The images were preprocessed and brightness augmented. The EfficientNet algorithm is implemented and the performance is evaluated by adding the four image enhancement algorithms. The CLAHE based EfficientNet model yielded an accuracy of 94.56%, precision of 95%, recall of 91%, and F1 of 93%. This study shows that adding a CLAHE image enhancement to the EfficientNet model improves the performance of the powerful Convolutional Neural Network model in classifying the CT images for Covid-19.

Role of Artificial Intelligence in COVID-19 Detection

The global pandemic of coronavirus disease (COVID-19) has caused millions of deaths and affected the livelihood of many more people. Early and rapid detection of COVID-19 is a challenging task for the medical community, but it is also crucial in stopping the spread of the SARS-CoV-2 virus. Prior substantiation of artificial intelligence (AI) in various fields of science has encouraged researchers to further address this problem. Various medical imaging modalities including X-ray, computed tomography (CT) and ultrasound (US) using AI techniques have greatly helped to curb the COVID-19 outbreak by assisting with early diagnosis. We carried out a systematic review on state-of-the-art AI techniques applied with X-ray, CT, and US images to detect COVID-19. In this paper, we discuss approaches used by various authors and the significance of these research efforts, the potential challenges, and future trends related to the implementation of an AI system for disease detection during the COVID-19 pandemic.