Inactivity and the passive slowing effect of cold on resting metabolism as the primary drivers of energy savings in overwintering fishes

Contrasting Population Trajectories of Temperate Reef Fishes and Invertebrates Following Seasonal and Multi-Decadal Temperature Change

Temperature perturbations from climate change affect ecosystems through short-term pulse events, such as heatwaves, and chronic long-term shifts. Temperate rocky reef ecosystems have been observed to show substantial ecological change as a result of short-term temperature fluctuations, but the longer-term impacts of temperature change remain poorly understood. Here, we investigate temperate reef fishes and mobile invertebrates along Tasmania's east coast, contrasting trends in species richness, abundance, and community structure across seasons within a year to those observed over three decades of warming. Fishes exhibited dynamic seasonal shifts, but interannual changes in richness and abundance balanced out over decades with limited overall net change. In contrast, invertebrate communities changed little seasonally but suffered significant long-term losses. Our study revealed short-term ecological changes driven by temperature to be incongruent with long-term shifts. Species responded in varying ways, depending on life history and ecology. Fishes apparently tracked short temperature pulses, while less mobile invertebrates, such as echinoderms and molluscs, tolerated short-term fluctuations but exhibited long-term decline. Multi-scale studies across a broad range of taxa are needed to clarify thermal responses. The most vulnerable taxa-those facing long-term thermal stress-may be overlooked through decisions based on short-term studies, risking major biodiversity loss.

Is the diel cycle of routine metabolic rate in mummichog (Fundulus heteroclitus) affected by near-infrared lighting used for visualizing behavior of fishes at night?

The metabolic rate of a freely moving fish (routine metabolic rate) is tightly coupled with volitional movement (spontaneous activity), both of which commonly show strong daily cycles linked to the species-specific diel activity pattern. Mummichog (Fundulus heteroclitus), an important estuarine fish in the north western Atlantic Ocean, are historically reported as diurnal (i.e., more active during daylight). Our recent laboratory studies on a Bay of Fundy population, however, showed a free-running (i.e., similarly active daytime and night-time) or even nocturnal (i.e., more active at night-time) diel activity pattern. In the laboratory, near-infrared (NIR) illumination is commonly used with a NIR-sensitive camera to visualize fish activity across the light-dark periods of the day. Because NIR light is close to the visible light spectrum and certain fishes show sensitivity to NIR, the use of NIR with mummichog possibly could disturb the animals and obscure the identification of their true diel activity pattern. We aimed to determine if NIR illumination (940 nm wavelength) influences the diel activity pattern of mummichog. We used measurements of routine metabolic rate (oxygen consumption rate, MO2) as a proxy for activity, as evaluating the effect of NIR requires treatments where NIR lights are off, which precludes visualization and direct assessment of fish activity at night-time. We measured routine MO2 of mummichogs over 6 days, exposed to either NIR off-on-off (2 days for each off or on period) or the opposite sequence of NIR on-off-on (to control for time-dependent effects). NIR lights did not influence the diel cycle of routine MO2, and activity by proxy, in mummichog. Thus, NIR illumination is a suitable method to visualize mummichog during light-dark diel cycles. Routine MO2, and presumably activity, was similar or higher during night-time periods compared to daytime periods, confirming a free-running or nocturnal activity pattern for at least certain populations of mummichog.

Calibrating acceleration transmitters to quantify the seasonal energetic costs of activity in lake trout

Bioenergetics models are powerful tools used to address a range of questions in fish biology. However, these models are rarely informed by free-swimming activity data, introducing error. To quantify the costs of activity in free-swimming fish, calibrations produced from standardized laboratory trials can be applied to estimate energy expenditure from sensor data for specific tags and species. Using swim tunnel respirometry, we calibrated acceleration sensor-equipped transmitting tags to estimate the aerobic metabolic rates (ṀO2) of lake trout (Salvelinus namaycush) at three environmentally relevant temperatures. Aerobic and swim performance were also assessed. Like other calibrations, we found strong relationships between ṀO2 and acceleration or swimming speed, and jackknife validations and data simulations suggest that our models accurately predict metabolic costs of activity in adult lake trout (~5% algebraic error and ~20% absolute error). Aerobic and swim performance metrics were similar to those reported in other studies, but their critical swimming speed was lower than expected. Additionally, lake trout exhibited a wide aerobic scope, suggesting that the avoidance of waters ≥15°C may be related to selection for optimal growing temperatures. The ability to quantify the free-swimming energetic costs of activity will advance our understanding of lake trout ecology and may yield improvements to bioenergetics model.

Using heart rate and acceleration biologgers to estimate winter activity costs in free-swimming largemouth bass

Winter is a critical period for largemouth bass (Micropterus nigricans) with winter severity and duration limiting their population growth at northern latitudes. Unfortunately, we have an incomplete understanding of their winter behaviour and energy use in the wild. More winter-focused research is needed to better understand their annual energy budget, improve bioenergetics models, and establish baselines to assess the impacts of climate warming; however, winter research is challenging due to ice cover. Implantable tags show promise for winter-focused research as they can be deployed prior to ice formation. Here, using swim tunnel respirometry, we calibrated heart rate and acceleration biologgers to enable estimations of metabolic rate (ṀO2) and swimming speed in free-swimming largemouth bass across a range of winter-relevant temperatures. In addition, we assessed their aerobic and swim performance. Calculated group thermal sensitivities of most performance metrics indicated the passive physicochemical effects of temperature, suggesting little compensation in the cold; however, resting metabolic rate and critical swimming speed showed partial compensation. We found strong relationships between acceleration and swimming speed, as well as between ṀO2 and heart rate, acceleration, or swimming speed. Jackknife validations indicated that these modeled relationships accurately estimate swimming speed and ṀO2 from biologger recordings. However, there were relatively few reliable heart rate recordings to model the ṀO2 relationship. Recordings of heart rate were high-quality during holding but dropped during experimentation, potentially due to interference from aerobic muscles during swimming. The models informed by acceleration or swimming speed appear to be best suited for field applications.

Metabolic rate and mitochondrial physiology adjustments in Arctic char (Salvelinus alpinus) during cyclic hypoxia

Diel fluctuations of oxygen levels characterize cyclic hypoxia and pose a significant challenge to wild fish populations. Although recent research has been conducted on the effects of hypoxia and reoxygenation, mechanisms by which fish acclimatize to cyclic hypoxia remain unclear, especially in hypoxia-sensitive species. We hypothesized that acclimation to cyclic hypoxia requires a downregulation of aerobic metabolic rate and an upregulation of mitochondrial respiratory capacities to mitigate constraints on aerobic metabolism and the elevated risk of oxidative stress upon reoxygenation. We exposed Arctic char (Salvelinus alpinus) to 10 days of cyclic hypoxia and measured their metabolic rate and mitochondrial physiology to determine how they cope with fluctuating oxygen concentrations. We measured oxygen consumption as a proxy of metabolic rate and observed that Arctic char defend their standard metabolic rate but decrease their routine metabolic rate during hypoxic phases, presumably through the repression of spontaneous swimming activities. At the mitochondrial level, acute cyclic hypoxia increases oxygen consumption without ADP (CI-LEAK) in the liver and heart. Respiration in the presence of ADP (OXPHOS) temporarily increases in the liver and decreases in the heart. Cytochrome c oxidase oxygen affinity also increases at day 3 in the liver. However, no change occurs in the brain, which is likely primarily preserved through preferential perfusion (albeit not measured in this study). Finally, in vivo measurements of reactive oxygen species revealed the absence of an oxidative burst in mitochondria in the cyclic hypoxia group. Our study shows that Arctic char acclimatize to cyclic hypoxia through organ-specific mitochondrial adjustments.

The effects of winter cold on acute copper bioaccumulation and toxicity in brook char (Salvelinus fontinalis)

Freshwater fish that are acutely exposed to copper (Cu) can experience disturbances of ion regulation and ammonia excretion. Temperature has been shown to affect Cu bioaccumulation and toxicity in fish, but the focus has largely been on warm temperature effects. Yet, acclimation of freshwater fish to near-freezing temperatures encountered during the winter of temperate regions can challenge fish condition and physiology, including ion regulation. Thus, temperate freshwater fish might be particularly sensitive to Cu in the winter. We investigated how winter cold affects acute Cu bioaccumulation and toxicity in juvenile brook char (Salvelinus fontinalis). Following gradual acclimation to cold temperature (-2 °C/week from 14 °C, then 4 weeks at 3 °C) vs. a warmer temperature around the species thermal optimum (14 °C for 9 weeks), and following a cold challenge (-3 °C/day from 14 °C, then 24 h at 3 °C) vs. a cold acclimation (-2 °C/week from 14 °C, then 13 weeks at 3 °C), we measured gill-Cu bioaccumulation, net fluxes of ammonia (NH3), chloride (Cl-) and net and unidirectional fluxes of sodium (Na+) over a 30-h Cu exposure. Overall, winter cold did not appear to be challenging to brook char, as cold-acclimated fish had a higher fish condition and showed no sign of ion regulation impairment or increased Cu sensitivity. Contrary to our prediction, we found that Cu bioaccumulation over a 30-h Cu exposure was not significantly affected by acclimation temperature. Effects of temperature on Cu physiological effects were relatively limited (mainly on inhibition of Na+ influx and of NH3 excretion), with slightly greater effects observed in 14 °C-acclimated fish.

Resting cell formation in the marine diatom Thalassiosira pseudonana

Resting cells represent a survival strategy employed by diatoms to endure prolonged periods of unfavourable conditions. In the oceans, many diatoms sink at the end of their blooming season and therefore need to endure cold and dark conditions in the deeper layers of the water column. How they survive these conditions is largely unknown. We conducted an integrative analysis encompassing methods from histology, physiology, biochemistry, and genetics to reveal the biological mechanism of resting-cell formation in the model diatom Thalassiosira pseudonana. Resting-cell formation was triggered by a decrease in light and temperature with subsequent catabolism of storage compounds. Resting cells were characterised by an acidic and viscous cytoplasm and altered morphology of the chloroplast ultrastructure. The formation of resting cells in T. pseudonana is an energy demanding process required for a biophysical alteration of the cytosol and chloroplasts to endure the unfavourable conditions of the deeper ocean as photosynthetic organisms. However, most resting cells (> 90%) germinate upon return to favorable growth conditions.

Exploring opportunities of Artificial Intelligence in aquaculture to meet increasing food demand

The increasing global population drives a rising demand for food, particularly fish as a preferred protein source, straining capture fisheries. Overfishing has depleted wild stocks, emphasizing the need for advanced aquaculture technologies. Unlike agriculture, aquaculture has not seen substantial technological advancements. Artificial Intelligence (AI) tools like Internet of Things (IoT), machine learning, cameras, and algorithms offer solutions to reduce human intervention, enhance productivity, and monitor fish health, feed optimization, and water resource management. However, challenges such as data collection, standardization, model accuracy, interpretability, and integration with existing aquaculture systems persist. This review explores the adoption of AI techniques and tools to advance the aquaculture industry and bridge the gap between food supply and demand.

Among-individual variation in thermal plasticity of fish metabolic rates causes profound variation in temperature-specific trait repeatability, but does not co-vary with behavioural plasticity

Conspecifics of the same age and size differ consistently in the pace with which they expend energy. This among-individual variation in metabolic rate is thought to influence behavioural variation, since differences in energy requirements should motivate behaviours that facilitate energy acquisition, such as being bold or active in foraging. While there is evidence for links between metabolic rate and behaviour in constant environments, we know little about whether metabolic rate and behaviour change together when the environment changes-that is, if metabolic and behavioural plasticity co-vary. We investigated this using a fish that becomes dormant in winter and strongly reduces its activity when the environment cools, the cunner (Tautogolabrus adspersus). We found strong and predictable among-individual variation in thermal plasticity of metabolic rates, from resting to maximum levels, but no evidence for among-individual variation in thermal plasticity of movement activity, meaning that these key physiological and behavioural traits change independently when the environment changes. The strong among-individual variation in metabolic rate plasticity resulted in much higher repeatability (among-individual consistency) of metabolic rates at warm than cold temperatures, indicating that the potential for metabolic rate to evolve under selection is temperature-dependent, as repeatability can set the upper limit to heritability. This article is part of the theme issue 'The evolutionary significance of variation in metabolic rates'.

Environmental variation associated with overwintering elicits marked metabolic plasticity in a temperate salmonid, Salvelinus fontinalis

Poleward winters commonly expose animals, including fish, to frigid temperatures and low food availability. Fishes that remain active over winter must therefore balance trade-offs between conserving energy and maintaining physiological performance in the cold, yet the extent and underlying mechanisms of these trade-offs are not well understood. We investigated the metabolic plasticity of brook char (Salvelinus fontinalis), a temperate salmonid, from the biochemical to whole-animal level in response to cold and food deprivation. Acute cooling (1°C day-1) from 14°C to 2°C had no effect on food consumption but reduced activity by 77%. We then assessed metabolic performance and demand over 90 days with exposure to warm (8°C) or cold winter (2°C) temperatures while fish were fed or starved. Resting metabolic rate (RMR) decreased substantially during initial cooling from 8°C to 2°C (Q10=4.2-4.5) but brook char exhibited remarkable thermal compensation during acclimation (Q10=1.4-1.6). Conversely, RMR was substantially lower (40-48%) in starved fish, conserving energy. Thus, the absolute magnitude of thermal plasticity may be masked or modified under food restriction. This reduction in RMR was associated with atrophy and decreases in in vivo protein synthesis rates, primarily in non-essential tissues. Remarkably, food deprivation had no effect on maximum oxygen uptake rates and thus aerobic capacity, supporting the notion that metabolic capacity can be decoupled from RMR in certain contexts. Overall, our study highlights the multi-faceted energetic flexibility of Salvelinus spp. that likely contributes to their success in harsh and variable environments and may be emblematic of winter-active fishes more broadly.

Three steps down: Metabolic depression in winter-acclimatized crucian carp (Carassius carassius L.)

Acclimatization of certain ectothermic vertebrates to winter conditions is associated with reduced energy consumption (winter dormancy). Principally, this may be achieved by reducing movement activity, depression of basal cellular functions, or by switching from aerobic to anaerobic energy production to sustain low energy consumption during anoxia. Therefore, we determined standard (SMR), routine (RMR) and anoxic (AMR) metabolic rates in summer- (SumA; 20 °C) and winter-acclimatized (WinA; 2 °C) crucian carp (Carassius carassius), an anoxia-tolerant teleost fish. At 20 °C, RMR was 39% lower in WinA than SumA fish (p < 0.05), indicating reduced movements in winter. SMR, measured for the first time in crucian carp, was 45% lower in WinA than SumA fish at 10 °C (p < 0.05), indicating significant reduction of energy consumption in vital cellular processes. At 2 °C, AMR - measured from ethanol production- was 78% and 97% of the SMR and RMR levels at the same temperature, respectively. The current study revealed that the winter dormancy in anoxia-tolerant crucian carp is achieved in 3 different steps: (1) by active reduction of SMR, possibly in anticipation of seasonal anoxia, (2) acute Arrhenius Q10 effect that slows SMR as well as RMR, and (3) direct response to the absence of oxygen (AMR). Furthermore, the anoxic energy production was strongly dependent on body mass with scaling exponents of -0.335 and - 0.421 for WinA and SumA fish, respectively.

Thermal constraints on exercise and metabolic performance do not explain the use of dormancy as an overwintering strategy in the cunner (Tautogolabrus adspersus)

Winter cold slows ectotherm physiology, potentially constraining activities and ecological opportunities at poleward latitudes. Yet, many fishes are winter-active, facilitated by thermal compensation that improves cold performance. Conversely, winter-dormant fishes (e.g. cunner, Tautogolabrus adspersus) become inactive and non-feeding overwinter. Why are certain fishes winter-dormant? We hypothesized that winter dormancy is an adaptive behavioural response arising in poleward species that tolerate severe, uncompensated constraints of cold on their physiological performance. We predicted that below their dormancy threshold of 7--8°C, exercise and metabolic performance of cunner are greatly decreased, even after acclimation (i.e. shows above-normal, uncompensated thermal sensitivity, Q10>1-3). We measured multiple key performance metrics (e.g. C-start maximum velocity, chase swimming speed, aerobic scope) in cunner after acute exposure to 26-2°C (3°C intervals using 14°C-acclimated fish) or acclimation (5-8 weeks) to 14-2°C (3°C intervals bracketing the dormancy threshold). Performance declined with cooling, and the acute Q10 of all six performance rate metrics was significantly greater below the dormancy threshold temperature (Q10,acute8-2°C=1.5-4.9, mean=3.3) than above (Q10,acute14-8°C=1.1-1.9, mean=1.5), inferring a cold constraint. However, 2°C acclimation (temporally more relevant to seasonal cooling) improved performance, abolishing the acute constraint (Q10,acclimated8-2°C=1.4-3.0, mean=2.0; also cf. Q10,acclimated14-8°C=1.2-2.9, mean=1.7). Thus, dormant cunner show partial cold-compensation of exercise and metabolic performance, similar to winter-active species. However, responsiveness to C-start stimuli was greatly cold-constrained even following acclimation, suggesting dormancy involves sensory limitation. Thermal constraints on metabolic and exercise physiology are not significant drivers of winter dormancy in cunner. In fact, compensatory plasticity at frigid temperatures is retained even in a dormant fish.

Whole-genome sequencing reveals fine-scale environment-associated divergence near the range limits of a temperate reef fish

Environmental variation is increasingly recognized as an important driver of diversity in marine species despite the lack of physical barriers to dispersal and the presence of pelagic stages in many taxa. A robust understanding of the genomic and ecological processes involved in structuring populations is lacking for most marine species, often hindering management and conservation action. Cunner (Tautogolabrus adspersus) is a temperate reef fish with both pelagic early life-history stages and strong site-associated homing as adults; the species is also of interest for use as a cleaner fish in salmonid aquaculture in Atlantic Canada. We aimed to characterize genomic and geographic differentiation of cunner in the Northwest Atlantic. To achieve this, a chromosome-level genome assembly for cunner was produced and used to characterize spatial population structure throughout Atlantic Canada using whole-genome sequencing. The genome assembly spanned 0.72 Gbp and 24 chromosomes; whole-genome sequencing of 803 individuals from 20 locations from Newfoundland to New Jersey identified approximately 11 million genetic variants. Principal component analysis revealed four regional Atlantic Canadian groups. Pairwise FST and selection scans revealed signals of differentiation and selection at discrete genomic regions, including adjacent peaks on chromosome 10 across multiple pairwise comparisons (i.e. FST 0.5-0.75). Redundancy analysis suggested association of environmental variables related to benthic temperature and oxygen range with genomic structure. Results suggest regional scale diversity in this temperate reef fish and can directly inform the collection and translocation of cunner for aquaculture applications and the conservation of wild populations throughout the Northwest Atlantic.

The effects of winter cold acclimation on acute and chronic cadmium bioaccumulation and toxicity in the banded killifish (Fundulus diaphanus)

Temperate freshwater fishes can experience large seasonal temperature fluctuations that could affect their exposure and sensitivity to trace metals. Yet, temperature effects are overlooked in ecotoxicology studies, especially for cold temperatures typical of the winter. In the present study, the effects of long-term cold acclimation on Cd bioaccumulation and toxicity were investigated in a freshwater fish, the banded killifish (Fundulus diaphanus). Killifish were acclimated to 14 °C or gradually cooled (2 °C/week) to 4 °C and cold acclimated for 6 weeks. Then, both acclimation groups were exposed to environmentally realistic waterborne Cd concentrations (0, 0.5 or 5 µg Cd L-1) for a further 28 d at their respective acclimation temperatures. Tissue metal bioaccumulation, fish survival, condition, and markers of oxidative and ionoregulation stress, were measured after 0, 2, 5 and 28 days of Cd exposure. Cadmium tissue accumulation increased over the exposure duration and was typically lower in cold-acclimated fish. In agreement with this lower bioaccumulation, fewer Cd toxic effects were observed in cold-acclimated fish. There was little evidence of a difference in intrinsic Cd sensitivity between 4 °C- and 14 °C-acclimated fish, as Cd toxicity appeared to closely follow Cd bioaccumulation. Our study suggests that current environmental water quality guidelines would be protective in the winter for the abundant and ecologically-important banded killifish.

Metabolic resilience of the Australasian snapper (Chrysophrys auratus) to marine heatwaves and hypoxia

Marine organisms are under threat from a simultaneous combination of climate change stressors, including warming sea surface temperatures (SST), marine heatwave (MHW) episodes, and hypoxic events. This study sought to investigate the impacts of these stressors on the Australasian snapper (C. auratus) - a finfish species of high commercial and recreational importance, from the largest snapper fishery in Aotearoa New Zealand (SNA1). A MHW scenario was simulated from 21°C (current February SST average for north-eastern New Zealand) to a future predicted level of 25°C, with the whole-animal and mitochondrial metabolic performance of snapper in response to hypoxia and elevated temperature tested after 1-, 10-, and 30-days of thermal challenge. It was hypothesised that key indicators of snapper metabolic performance would decline after 1-day of MHW stress, but that partial recovery might arise as result of thermal plasticity after chronic (e.g., 30-day) exposures. In contrast to this hypothesis, snapper performance remained high throughout the MHW: 1) Aerobic metabolic scope increased after 1-day of 25°C exposure and remained high. 2) Hypoxia tolerance, measured as the critical O₂ pressure and O₂ pressure where loss of equilibrium occurred, declined after 1-day of warm-acclimation, but recovered quickly with no observable difference from the 21°C control following 30-days at 25°C. 3) The performance of snapper mitochondria was also maintained, with oxidative phosphorylation respiration and proton leak flux across the inner mitochondrial membrane of the heart remaining mostly unaffected. Collectively, the results suggest that heart mitochondria displayed resilience, or plasticity, in snapper chronically exposed to 25°C. Therefore, contrary to the notion of climate change having adverse metabolic effects, future temperatures approaching 25°C may be tolerated by C. auratus in Northern New Zealand. Even in conjunction with supplementary hypoxia, 25°C appears to represent a metabolically optimal temperature for this species.

Metabolic rate increases with acclimation temperature and is associated with mitochondrial function in some tissues of threespine stickleback

The metabolic rate (ṀO2) of eurythermal fishes changes in response to temperature, yet it is unclear how changes in mitochondrial function contribute to changes in ṀO2. We hypothesized that ṀO2 would increase with acclimation temperature in the threespine stickleback (Gasterosteus aculeatus) in parallel with metabolic remodeling at the cellular level but that changes in metabolism in some tissues, such as liver, would contribute more to changes in ṀO2 than others. Threespine stickleback were acclimated to 5, 12 and 20°C for 7 to 21 weeks. At each temperature, standard and maximum metabolic rate (SMR and MMR, respectively), and absolute aerobic scope (AAS) were quantified, along with mitochondrial respiration rates in liver, oxidative skeletal and cardiac muscles, and the maximal activity of citrate synthase (CS) and lactate dehydrogenase (LDH) in liver, and oxidative and glycolytic skeletal muscles. SMR, MMR and AAS increased with acclimation temperature, along with rates of mitochondrial phosphorylating respiration in all tissues. Low SMR and MMR at 5°C were associated with low or undetectable rates of mitochondrial complex II activity and a greater reliance on complex I activity in liver, oxidative skeletal muscle and heart. SMR was positively correlated with cytochrome c oxidase (CCO) activity in liver and oxidative muscle, but not mitochondrial proton leak, whereas MMR was positively correlated with CCO activity in liver. Overall, the results suggest that changes in ṀO2 in response to temperature are driven by changes in some aspects of mitochondrial function in some, but not all, tissues of threespine stickleback.