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Moreni G, Zou L, Pennartz CMA, Mejias JF. Synaptic plasticity facilitates oscillations in a V1 cortical column model with multiple interneuron types. Front Comput Neurosci 2025; 19:1568143. [PMID: 40370493 PMCID: PMC12075120 DOI: 10.3389/fncom.2025.1568143] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2025] [Accepted: 04/08/2025] [Indexed: 05/16/2025] Open
Abstract
Neural rhythms are ubiquitous in cortical recordings, but it is unclear whether they emerge due to the basic structure of cortical microcircuits or depend on function. Using detailed electrophysiological and anatomical data of mouse V1, we explored this question by building a spiking network model of a cortical column incorporating pyramidal cells, PV, SST, and VIP inhibitory interneurons, and dynamics for AMPA, GABA, and NMDA receptors. The resulting model matched in vivo cell-type-specific firing rates for spontaneous and stimulus-evoked conditions in mice, although rhythmic activity was absent. Upon introduction of long-term synaptic plasticity in the form of an STDP rule, broad-band (15-60 Hz) oscillations emerged, with feedforward/feedback input streams enhancing/suppressing the oscillatory drive, respectively. These plasticity-triggered rhythms relied on all cell types, and specific experience-dependent connectivity patterns were required to generate oscillations. Our results suggest that neural rhythms are not necessarily intrinsic properties of cortical circuits, but rather they may arise from structural changes elicited by learning-related mechanisms.
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Affiliation(s)
- Giulia Moreni
- Cognitive and Systems Neuroscience Group, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, Netherlands
| | - Licheng Zou
- Cognitive and Systems Neuroscience Group, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, Netherlands
| | - Cyriel M. A. Pennartz
- Cognitive and Systems Neuroscience Group, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, Netherlands
- Research Priority Area Amsterdam Brain and Cognition, University of Amsterdam, Amsterdam, Netherlands
| | - Jorge F. Mejias
- Cognitive and Systems Neuroscience Group, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, Netherlands
- Research Priority Area Amsterdam Brain and Cognition, University of Amsterdam, Amsterdam, Netherlands
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2
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Onorato I, Tzanou A, Schneider M, Uran C, Broggini AC, Vinck M. Distinct roles of PV and Sst interneurons in visually induced gamma oscillations. Cell Rep 2025; 44:115385. [PMID: 40048428 DOI: 10.1016/j.celrep.2025.115385] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2024] [Revised: 11/26/2024] [Accepted: 02/11/2025] [Indexed: 03/29/2025] Open
Abstract
Gamma-frequency oscillations are a hallmark of active information processing and are generated by interactions between excitatory and inhibitory neurons. To examine the contribution of distinct inhibitory interneurons to visually induced gamma oscillations, we recorded from optogenetically identified PV+ (parvalbumin) and Sst+ (somatostatin) interneurons in mouse primary visual cortex (V1). PV and Sst inhibitory interneurons exhibited distinct correlations to gamma oscillations. PV cells were strongly phase locked, while Sst cells were weakly phase locked, except for narrow-waveform Sst cells. PV cells fired at a substantially earlier phase in the gamma cycle (≈6 ms) than Sst cells. PV cells fired shortly after the onset of tightly synchronized burst events in excitatory cells, while Sst interneurons fired after subsequent burst spikes or single spikes. These findings indicate a main role of PV interneurons in synchronizing network activity and suggest that PV and Sst interneurons control the excitability of somatic and dendritic neural compartments with precise time delays coordinated by gamma oscillations.
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Affiliation(s)
- Irene Onorato
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany; Max Planck Institute for Brain Research, 60438 Frankfurt, Germany; Neuroscience Research Center, Charité-Universitätsmedizin Berlin, 10117 Berlin, Germany.
| | - Athanasia Tzanou
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany
| | - Marius Schneider
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany; Max Planck Institute for Brain Research, 60438 Frankfurt, Germany
| | - Cem Uran
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany; Donders Centre for Neuroscience, Department of Neurophysics, Radboud University Nijmegen, 6525 Nijmegen, the Netherlands; Max Planck Institute for Brain Research, 60438 Frankfurt, Germany
| | - Ana Clara Broggini
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany
| | - Martin Vinck
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany; Donders Centre for Neuroscience, Department of Neurophysics, Radboud University Nijmegen, 6525 Nijmegen, the Netherlands.
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3
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Yoon E, Park Y, Kim HJ, Park J, Han JW, Woo SJ, Yoo S, Kim KW. Center frequency as optimal frequency of visual stimulation for spreading entrained gamma rhythms to other target brain regions in cognitively normal older adults. GeroScience 2025:10.1007/s11357-025-01552-6. [PMID: 39966249 DOI: 10.1007/s11357-025-01552-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2024] [Accepted: 01/30/2025] [Indexed: 02/20/2025] Open
Abstract
Gamma entrainment using 40 Hz sensory stimulation has shown promise in AD mouse models, but inconsistent results in AD patients, possibly due to interspecies and interindividual differences in center frequency (CF). This study aimed to investigate whether gamma rhythms entrained by visual stimulation at an individual's CF can spread better than those at other frequency conditions in older adults. We entrained gamma rhythms in 32 cognitively normal older participants using light flickering at 32 Hz, 34 Hz, 36 Hz, 38 Hz, and 40 Hz. We identified each individual's CF among these five frequencies and compared the spread, strength, and stability of gamma connectivity induced by light stimulation flickering at an individual's CF with those at other frequencies using generalized estimating equation and repeated measures ANOVA. In about two-thirds of the participants, 32 Hz (40.6%) and 34 Hz (28.1%) were identified as CF. The mean spread, strength, and stability of gamma connectivity involving the visual cortex (GCV-NV) were higher than those do not involve the visual cortex (GCNV-NV, p < 0.05). Between the visual cortex and other brain regions, FLS induced with frequencies of high event related spectral perturbation values, including CF and non-center frequency (NCF) 1, generally induced broader, stronger, and more stable gamma connectivity compared to most other NCFs (p < 0.001 when comparing NCFs with either CF and NCF1 for both strength and spread; p = 0.012 when comparing CF and NCF3 for stability). Gamma rhythms entrained by visual stimulation may better spread to other brain regions when its frequency matched to the individual's CF.
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Affiliation(s)
- Euisuk Yoon
- Department of Brain and Cognitive Science, Seoul National University College of Natural Sciences, Seoul, Korea
- Department of Neuropsychiatry, Seoul National University Bundang Hospital, 82, Gumi-Ro 173 Beon-Gil, Bundang-Gu, Seongnam-Si, Gyeonggi-Do, 13620, Republic of Korea
| | - Yeseung Park
- Department of Brain and Cognitive Science, Seoul National University College of Natural Sciences, Seoul, Korea
- Department of Neuropsychiatry, Seoul National University Bundang Hospital, 82, Gumi-Ro 173 Beon-Gil, Bundang-Gu, Seongnam-Si, Gyeonggi-Do, 13620, Republic of Korea
- Institute of Human Behavioral Medicine, Seoul National University Medical Research Center, Seoul, Republic of Korea
| | - Hong Jun Kim
- Department of Brain and Cognitive Science, Seoul National University College of Natural Sciences, Seoul, Korea
| | - Jaehyeok Park
- School of Electrical Engineering, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea
| | - Ji Won Han
- Department of Brain and Cognitive Science, Seoul National University College of Natural Sciences, Seoul, Korea
| | - Se Joon Woo
- Department of Ophthalmology, Seoul National University College of Medicine, Seoul, Republic of Korea
- Department of Ophthalmology, Seoul National University Bundang Hospital, Seongnam, Republic of Korea
| | - Seunghyup Yoo
- School of Electrical Engineering, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea
| | - Ki Woong Kim
- Department of Brain and Cognitive Science, Seoul National University College of Natural Sciences, Seoul, Korea.
- Department of Neuropsychiatry, Seoul National University Bundang Hospital, 82, Gumi-Ro 173 Beon-Gil, Bundang-Gu, Seongnam-Si, Gyeonggi-Do, 13620, Republic of Korea.
- Department of Psychiatry, Seoul National University College of Medicine, Seoul, Korea.
- Department of Health Science and Technology, Seoul National University Graduate School of Convergence Science and Technology, Suwon, Korea.
- Institute of Human Behavioral Medicine, Seoul National University Medical Research Center, Seoul, Republic of Korea.
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4
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Lee K, Dora S, Mejias JF, Bohte SM, Pennartz CMA. Predictive coding with spiking neurons and feedforward gist signaling. Front Comput Neurosci 2024; 18:1338280. [PMID: 38680678 PMCID: PMC11045951 DOI: 10.3389/fncom.2024.1338280] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2023] [Accepted: 03/14/2024] [Indexed: 05/01/2024] Open
Abstract
Predictive coding (PC) is an influential theory in neuroscience, which suggests the existence of a cortical architecture that is constantly generating and updating predictive representations of sensory inputs. Owing to its hierarchical and generative nature, PC has inspired many computational models of perception in the literature. However, the biological plausibility of existing models has not been sufficiently explored due to their use of artificial neurons that approximate neural activity with firing rates in the continuous time domain and propagate signals synchronously. Therefore, we developed a spiking neural network for predictive coding (SNN-PC), in which neurons communicate using event-driven and asynchronous spikes. Adopting the hierarchical structure and Hebbian learning algorithms from previous PC neural network models, SNN-PC introduces two novel features: (1) a fast feedforward sweep from the input to higher areas, which generates a spatially reduced and abstract representation of input (i.e., a neural code for the gist of a scene) and provides a neurobiological alternative to an arbitrary choice of priors; and (2) a separation of positive and negative error-computing neurons, which counters the biological implausibility of a bi-directional error neuron with a very high baseline firing rate. After training with the MNIST handwritten digit dataset, SNN-PC developed hierarchical internal representations and was able to reconstruct samples it had not seen during training. SNN-PC suggests biologically plausible mechanisms by which the brain may perform perceptual inference and learning in an unsupervised manner. In addition, it may be used in neuromorphic applications that can utilize its energy-efficient, event-driven, local learning, and parallel information processing nature.
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Affiliation(s)
- Kwangjun Lee
- Cognitive and Systems Neuroscience Group, Swammerdam Institute for Life Sciences, Faculty of Science, University of Amsterdam, Amsterdam, Netherlands
| | - Shirin Dora
- Cognitive and Systems Neuroscience Group, Swammerdam Institute for Life Sciences, Faculty of Science, University of Amsterdam, Amsterdam, Netherlands
- Department of Computer Science, School of Science, Loughborough University, Loughborough, United Kingdom
| | - Jorge F. Mejias
- Cognitive and Systems Neuroscience Group, Swammerdam Institute for Life Sciences, Faculty of Science, University of Amsterdam, Amsterdam, Netherlands
| | - Sander M. Bohte
- Cognitive and Systems Neuroscience Group, Swammerdam Institute for Life Sciences, Faculty of Science, University of Amsterdam, Amsterdam, Netherlands
- Machine Learning Group, Centre of Mathematics and Computer Science, Amsterdam, Netherlands
| | - Cyriel M. A. Pennartz
- Cognitive and Systems Neuroscience Group, Swammerdam Institute for Life Sciences, Faculty of Science, University of Amsterdam, Amsterdam, Netherlands
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5
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Su Z, Liu M, Yuan Y, Jiao H. Transcranial ultrasound stimulation selectively affects cortical neurovascular coupling across neuronal types and LFP frequency bands. Cereb Cortex 2024; 34:bhad465. [PMID: 38044470 DOI: 10.1093/cercor/bhad465] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2023] [Revised: 11/10/2023] [Accepted: 11/13/2023] [Indexed: 12/05/2023] Open
Abstract
Previous studies have affirmed that transcranial ultrasound stimulation (TUS) can influence cortical neurovascular coupling across low-frequency (0-2 Hz)/high-frequency (160-200 Hz) neural oscillations and hemodynamics. Nevertheless, the selectivity of this coupling triggered by transcranial ultrasound stimulation for spike activity (> 300 Hz) and additional frequency bands (4-150 Hz) remains elusive. We applied transcranial ultrasound stimulation to mice visual cortex while simultaneously recording total hemoglobin concentration, spike activity, and local field potentials. Our findings include (1) a significant increase in coupling strength between spike firing rates of putative inhibitory neurons/putative excitatory neurons and total hemoglobin concentration post-transcranial ultrasound stimulation; (2) an ~ 2.1-fold higher Pearson correlation coefficient between putative inhibitory neurons and total hemoglobin concentration compared with putative excitatory neurons and total hemoglobin concentration (*P < 0.05); (3) a notably greater cross-correlation between putative inhibitory neurons and total hemoglobin concentration than that between putative excitatory neurons and total hemoglobin concentration (*P < 0.05); (4) an enhancement of Pearson correlation coefficient between the relative power of γ frequency band (30-80 Hz), hγ frequency band (80-150 Hz) and total hemoglobin concentration following transcranial ultrasound stimulation (*P < 0.05); and (5) strongest cross-correlation observed at negative delay for θ frequency band, and positive delay for α, β, γ, hγ frequency bands. Collectively, these results demonstrate that cortical neurovascular coupling evoked by transcranial ultrasound stimulation exhibits selectivity concerning neuronal types and local field potential frequency bands.
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Affiliation(s)
- Zhaocheng Su
- School of Electrical Engineering, Yanshan University, Qinhuangdao 066004, China
- Key Laboratory of Intelligent Rehabilitation and Neuromodulation of Hebei Province, Yanshan University, Qinhuangdao 066004, China
| | - Mengyang Liu
- Center for Medical Physics and Biomedical Engineering, Medical University of Vienna, Vienna 1090, Austria
| | - Yi Yuan
- School of Electrical Engineering, Yanshan University, Qinhuangdao 066004, China
- Key Laboratory of Intelligent Rehabilitation and Neuromodulation of Hebei Province, Yanshan University, Qinhuangdao 066004, China
| | - Honglei Jiao
- Department of Neurology, the Second Hospital of Hebei Medical University, Shijiazhuang 050000, China
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6
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Veit J, Handy G, Mossing DP, Doiron B, Adesnik H. Cortical VIP neurons locally control the gain but globally control the coherence of gamma band rhythms. Neuron 2023; 111:405-417.e5. [PMID: 36384143 PMCID: PMC9898108 DOI: 10.1016/j.neuron.2022.10.036] [Citation(s) in RCA: 30] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2021] [Revised: 09/12/2022] [Accepted: 10/28/2022] [Indexed: 11/17/2022]
Abstract
Gamma band synchronization can facilitate local and long-range neural communication. In the primary visual cortex, visual stimulus properties within a specific location determine local synchronization strength, while the match of stimulus properties between distant locations controls long-range synchronization. The neural basis for the differential control of local and global gamma band synchronization is unknown. Combining electrophysiology, optogenetics, and computational modeling, we found that VIP disinhibitory interneurons in mouse cortex linearly scale gamma power locally without changing its stimulus tuning. Conversely, they suppress long-range synchronization when two regions process non-matched stimuli, tuning gamma coherence globally. Modeling shows that like-to-like connectivity across space and specific VIP→SST inhibition capture these opposing effects. VIP neurons thus differentially impact local and global properties of gamma rhythms depending on visual stimulus statistics. They may thereby construct gamma-band filters for spatially extended but continuous image features, such as contours, facilitating the downstream generation of coherent visual percepts.
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Affiliation(s)
- Julia Veit
- Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.
| | - Gregory Handy
- Departments of Neurobiology and Statistics, University of Chicago, Chicago, IL, USA; Grossman Center for Quantitative Biology and Human Behavior, University of Chicago, Chicago, IL, USA
| | - Daniel P Mossing
- Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA; Biophysics Graduate Program, University of California, Berkeley, Berkeley, CA, USA
| | - Brent Doiron
- Departments of Neurobiology and Statistics, University of Chicago, Chicago, IL, USA; Grossman Center for Quantitative Biology and Human Behavior, University of Chicago, Chicago, IL, USA
| | - Hillel Adesnik
- Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA; The Helen Wills Neuroscience Institute, University of California, Berkeley, Berkeley, CA, USA.
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7
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Wilson MN, Thunemann M, Liu X, Lu Y, Puppo F, Adams JW, Kim JH, Ramezani M, Pizzo DP, Djurovic S, Andreassen OA, Mansour AA, Gage FH, Muotri AR, Devor A, Kuzum D. Multimodal monitoring of human cortical organoids implanted in mice reveal functional connection with visual cortex. Nat Commun 2022; 13:7945. [PMID: 36572698 PMCID: PMC9792589 DOI: 10.1038/s41467-022-35536-3] [Citation(s) in RCA: 47] [Impact Index Per Article: 15.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2021] [Accepted: 12/09/2022] [Indexed: 12/27/2022] Open
Abstract
Human cortical organoids, three-dimensional neuronal cultures, are emerging as powerful tools to study brain development and dysfunction. However, whether organoids can functionally connect to a sensory network in vivo has yet to be demonstrated. Here, we combine transparent microelectrode arrays and two-photon imaging for longitudinal, multimodal monitoring of human cortical organoids transplanted into the retrosplenial cortex of adult mice. Two-photon imaging shows vascularization of the transplanted organoid. Visual stimuli evoke electrophysiological responses in the organoid, matching the responses from the surrounding cortex. Increases in multi-unit activity (MUA) and gamma power and phase locking of stimulus-evoked MUA with slow oscillations indicate functional integration between the organoid and the host brain. Immunostaining confirms the presence of human-mouse synapses. Implantation of transparent microelectrodes with organoids serves as a versatile in vivo platform for comprehensive evaluation of the development, maturation, and functional integration of human neuronal networks within the mouse brain.
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Affiliation(s)
- Madison N Wilson
- Department of Electrical and Computer Engineering, University of California San Diego, La Jolla, CA, USA
| | - Martin Thunemann
- Department of Biomedical Engineering, Boston University, Boston, MA, USA
| | - Xin Liu
- Department of Electrical and Computer Engineering, University of California San Diego, La Jolla, CA, USA
| | - Yichen Lu
- Department of Electrical and Computer Engineering, University of California San Diego, La Jolla, CA, USA
| | - Francesca Puppo
- Department of Pediatrics, University of California San Diego, School of Medicine, La Jolla, CA, USA
| | - Jason W Adams
- Department of Pediatrics, University of California San Diego, School of Medicine, La Jolla, CA, USA
- Department of Cellular and Molecular Medicine, University of California San Diego, School of Medicine, La Jolla, CA, USA
| | - Jeong-Hoon Kim
- Department of Electrical and Computer Engineering, University of California San Diego, La Jolla, CA, USA
| | - Mehrdad Ramezani
- Department of Electrical and Computer Engineering, University of California San Diego, La Jolla, CA, USA
| | - Donald P Pizzo
- Department of Pathology, University of California San Diego, La Jolla, CA, USA
| | - Srdjan Djurovic
- Department of Medical Genetics, Oslo University Hospital, Oslo, Norway
- NORMENT Center, Oslo, Norway
- Department of Clinical Science, University of Bergen, Bergen, Norway
- K. G. Jebsen Center for Neurodevelopmental Disorders, University of Oslo, Oslo, Norway
| | - Ole A Andreassen
- NORMENT Center, Oslo, Norway
- K. G. Jebsen Center for Neurodevelopmental Disorders, University of Oslo, Oslo, Norway
- Division of Mental Health and Addiction, Oslo University Hospital, Oslo, Norway
- Institute of Clinical Medicine, University of Oslo, Oslo, Norway
- Oslo University Hospital, University of Oslo, Oslo, Norway
| | - Abed AlFatah Mansour
- Laboratory of Genetics, The Salk Institute for Biological Studies, La Jolla, CA, USA
- Department of Medical Neurobiology, The Hebrew University of Jerusalem, Ein Kerem-Jerusalem, Israel
| | - Fred H Gage
- Laboratory of Genetics, The Salk Institute for Biological Studies, La Jolla, CA, USA
| | - Alysson R Muotri
- Department of Pediatrics, University of California San Diego, School of Medicine, La Jolla, CA, USA
- Department of Cellular and Molecular Medicine, University of California San Diego, School of Medicine, La Jolla, CA, USA
- Center for Academic Research and Training in Anthropogeny, University of California San Diego, La Jolla, CA, USA
- Archealization Center, University of California San Diego, La Jolla, CA, USA
- Kavli Institute for Brain and Mind, University of California San Diego, La Jolla, CA, USA
| | - Anna Devor
- Department of Biomedical Engineering, Boston University, Boston, MA, USA.
- Athinoula A. Martinos Center for Biomedical Imaging, Department of Radiology, Harvard Medical School, Massachusetts General Hospital, Charlestown, MA, USA.
| | - Duygu Kuzum
- Department of Electrical and Computer Engineering, University of California San Diego, La Jolla, CA, USA.
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8
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Sauer JF, Bartos M. Disrupted-in-schizophrenia-1 is required for normal pyramidal cell-interneuron communication and assembly dynamics in the prefrontal cortex. eLife 2022; 11:79471. [PMID: 36239988 PMCID: PMC9566853 DOI: 10.7554/elife.79471] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2022] [Accepted: 09/29/2022] [Indexed: 11/13/2022] Open
Abstract
We interrogated prefrontal circuit function in mice lacking Disrupted-in-schizophrenia-1 (Disc1-mutant mice), a risk factor for psychiatric disorders. Single-unit recordings in awake mice revealed reduced average firing rates of fast-spiking interneurons (INTs), including optogenetically identified parvalbumin-positive cells, and a lower proportion of INTs phase-coupled to ongoing gamma oscillations. Moreover, we observed decreased spike transmission efficacy at local pyramidal cell (PYR)-INT connections in vivo, suggesting a reduced excitatory effect of local glutamatergic inputs as a potential mechanism of lower INT rates. On the network level, impaired INT function resulted in altered activation of PYR assemblies: While assembly activations defined as coactivations within 25 ms were observed equally often, the expression strength of individual assembly patterns was significantly higher in Disc1-mutant mice. Our data, thus, reveal a role of Disc1 in shaping the properties of prefrontal assembly patterns by setting INT responsiveness to glutamatergic drive.
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Affiliation(s)
- Jonas-Frederic Sauer
- Institute for Physiology I, Faculty of Medicine, University of Freiburg, Freiburg, Germany
| | - Marlene Bartos
- Institute for Physiology I, Faculty of Medicine, University of Freiburg, Freiburg, Germany
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9
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Brécier A, Borel M, Urbain N, Gentet LJ. Vigilance and Behavioral State-Dependent Modulation of Cortical Neuronal Activity throughout the Sleep/Wake Cycle. J Neurosci 2022; 42:4852-4866. [PMID: 35552234 PMCID: PMC9188387 DOI: 10.1523/jneurosci.1400-21.2022] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2021] [Revised: 04/27/2022] [Accepted: 04/29/2022] [Indexed: 01/27/2023] Open
Abstract
GABAergic inhibitory neurons, through their molecular, anatomic, and physiological diversity, provide a substrate for the modulation of ongoing cortical circuit activity throughout the sleep/wake cycle. Here, we investigated neuronal activity dynamics of parvalbumin (PV), vasoactive intestinal polypeptide (VIP), and somatostatin (SST) neurons in naturally sleeping head-restrained mice at the level of layer 2/3 of the primary somatosensory barrel cortex of mice. Through calcium imaging and targeted single-unit loose-patch or whole-cell recordings, we found that PV action potential firing activity was largest during both rapid eye movement (REM) and nonrapid eye movement (NREM) sleep stages, that VIP neurons were most active during REM sleep, and that the overall activity of SST neurons remained stable throughout the sleep/wake cycle. Analysis of neuronal activity dynamics uncovered rapid decreases in PV cell firing at wake onset followed by a progressive recovery during wake. Simultaneous local field potential (LFP) recordings further revealed that except for SST neurons, a large proportion of neurons were modulated by ongoing delta and theta oscillations. During NREM sleep spindles, PV and SST activity increased and decreased, respectively. Finally, we uncovered the presence of whisking behavior in mice during REM sleep and show that the activity of VIP and SST is differentially modulated during awake and sleeping whisking bouts, which may provide a neuronal substrate for internal brain representations occurring during sleep.SIGNIFICANCE STATEMENT In the sensory cortex, the balance between excitation and inhibition is believed to be highly dynamic throughout the sleep/wake cycle, shaping the response of cortical circuits to external stimuli while allowing the formation of newly encoded memory. Using in vivo two-photon calcium imaging or targeted single-unit recordings combined with LFP recordings, we describe the vigilance state and whisking-behavior-dependent activity of excitatory pyramidal and inhibitory GABAergic neurons in the supragranular layers of mouse somatosensory cortex. Interneuronal activity was found to be differentially modulated by ongoing delta and theta waves, sleep spindles, and a novel type of whisking observed during REM sleep, potentially providing a neuronal substrate for internal brain representations occurring during sleep.
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Affiliation(s)
| | | | - Nadia Urbain
- Physiopathology of Sleep Networks, Lyon Neuroscience Research Center, Institut National de la Santé et de la Recherche Médicale U1028-Centre National de la Recherche Scientifique Mixed Research Unit 5292, Université Claude-Bernard Lyon 1, 69372 Lyon, France
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10
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Spyropoulos G, Saponati M, Dowdall JR, Schölvinck ML, Bosman CA, Lima B, Peter A, Onorato I, Klon-Lipok J, Roese R, Neuenschwander S, Fries P, Vinck M. Spontaneous variability in gamma dynamics described by a damped harmonic oscillator driven by noise. Nat Commun 2022; 13:2019. [PMID: 35440540 PMCID: PMC9018758 DOI: 10.1038/s41467-022-29674-x] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2020] [Accepted: 03/14/2022] [Indexed: 11/13/2022] Open
Abstract
Circuits of excitatory and inhibitory neurons generate gamma-rhythmic activity (30-80 Hz). Gamma-cycles show spontaneous variability in amplitude and duration. To investigate the mechanisms underlying this variability, we recorded local-field-potentials (LFPs) and spikes from awake macaque V1. We developed a noise-robust method to detect gamma-cycle amplitudes and durations, which showed a weak but positive correlation. This correlation, and the joint amplitude-duration distribution, is well reproduced by a noise-driven damped harmonic oscillator. This model accurately fits LFP power-spectra, is equivalent to a linear, noise-driven E-I circuit, and recapitulates two additional features of gamma: (1) Amplitude-duration correlations decrease with oscillation strength; (2) amplitudes and durations exhibit strong and weak autocorrelations, respectively, depending on oscillation strength. Finally, longer gamma-cycles are associated with stronger spike-synchrony, but lower spike-rates in both (putative) excitatory and inhibitory neurons. In sum, V1 gamma-dynamics are well described by the simplest possible model of gamma: A damped harmonic oscillator driven by noise.
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Affiliation(s)
- Georgios Spyropoulos
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany.
| | - Matteo Saponati
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany
- International Max Planck Research School for Neural Circuits, Frankfurt Am Main, Germany
| | - Jarrod Robert Dowdall
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany
- International Max Planck Research School for Neural Circuits, Frankfurt Am Main, Germany
| | - Marieke Louise Schölvinck
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany
| | - Conrado Arturo Bosman
- Donders Institute for Brain, Cognition and Behaviour, Radboud University, 6525 EN, Nijmegen, the Netherlands
- Swammerdam Institute for Life Sciences, Center for Neuroscience, Faculty of Science, University of Amsterdam, 1098 XH, Amsterdam, the Netherlands
| | - Bruss Lima
- Max Planck Institute for Brain Research, 60438, Frankfurt, Germany
- Carlos Chagas Filho Institute of Biophysics, Federal University of Rio de Janeiro, 21941-902, Rio de Janeiro, Brazil
| | - Alina Peter
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany
- International Max Planck Research School for Neural Circuits, Frankfurt Am Main, Germany
| | - Irene Onorato
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany
- International Max Planck Research School for Neural Circuits, Frankfurt Am Main, Germany
| | - Johanna Klon-Lipok
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany
- Max Planck Institute for Brain Research, 60438, Frankfurt, Germany
| | - Rasmus Roese
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany
| | - Sergio Neuenschwander
- Max Planck Institute for Brain Research, 60438, Frankfurt, Germany
- Brain Institute, Federal University of Rio Grande do Norte, 59056-450, Natal, Brazil
| | - Pascal Fries
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany.
- Donders Institute for Brain, Cognition and Behaviour, Radboud University, 6525 EN, Nijmegen, the Netherlands.
| | - Martin Vinck
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany.
- Donders Centre for Neuroscience, Department of Neuroinformatics, Radboud University, 6525 EN, Nijmegen, the Netherlands.
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11
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Pathway-specific contribution of parvalbumin interneuron NMDARs to synaptic currents and thalamocortical feedforward inhibition. Mol Psychiatry 2022; 27:5124-5134. [PMID: 36075962 PMCID: PMC9763122 DOI: 10.1038/s41380-022-01747-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/10/2022] [Revised: 08/08/2022] [Accepted: 08/11/2022] [Indexed: 01/19/2023]
Abstract
Prefrontal cortex (PFC) is a site of information convergence important for behaviors relevant to psychiatric disorders. Despite the importance of inhibitory GABAergic parvalbumin-expressing (PV+) interneurons to PFC circuit function and decades of interest in N-methyl-D-aspartate receptors (NMDARs) in these neurons, examples of defined circuit functions that depend on PV+ interneuron NMDARs have been elusive. Indeed, it remains controversial whether all PV+ interneurons contain functional NMDARs in adult PFC, which has major consequences for hypotheses of the pathogenesis of psychiatric disorders. Using a combination of fluorescent in situ hybridization, pathway-specific optogenetics, cell-type-specific gene ablation, and electrophysiological recordings from PV+ interneurons, here we resolve this controversy. We found that nearly 100% of PV+ interneurons in adult medial PFC (mPFC) express transcripts encoding GluN1 and GluN2B, and they have functional NMDARs. By optogenetically stimulating corticocortical and thalamocortical inputs to mPFC, we show that synaptic NMDAR contribution to PV+ interneuron EPSCs is pathway-specific, which likely explains earlier reports of PV+ interneurons without synaptic NMDAR currents. Lastly, we report a major contribution of NMDARs in PV+ interneurons to thalamus-mediated feedforward inhibition in adult mPFC circuits, suggesting molecular and circuit-based mechanisms for cognitive impairment under conditions of reduced NMDAR function. These findings represent an important conceptual advance that has major implications for hypotheses of the pathogenesis of psychiatric disorders.
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12
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Dora S, Bohte SM, Pennartz CMA. Deep Gated Hebbian Predictive Coding Accounts for Emergence of Complex Neural Response Properties Along the Visual Cortical Hierarchy. Front Comput Neurosci 2021; 15:666131. [PMID: 34393744 PMCID: PMC8355371 DOI: 10.3389/fncom.2021.666131] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2021] [Accepted: 06/28/2021] [Indexed: 11/13/2022] Open
Abstract
Predictive coding provides a computational paradigm for modeling perceptual processing as the construction of representations accounting for causes of sensory inputs. Here, we developed a scalable, deep network architecture for predictive coding that is trained using a gated Hebbian learning rule and mimics the feedforward and feedback connectivity of the cortex. After training on image datasets, the models formed latent representations in higher areas that allowed reconstruction of the original images. We analyzed low- and high-level properties such as orientation selectivity, object selectivity and sparseness of neuronal populations in the model. As reported experimentally, image selectivity increased systematically across ascending areas in the model hierarchy. Depending on the strength of regularization factors, sparseness also increased from lower to higher areas. The results suggest a rationale as to why experimental results on sparseness across the cortical hierarchy have been inconsistent. Finally, representations for different object classes became more distinguishable from lower to higher areas. Thus, deep neural networks trained using a gated Hebbian formulation of predictive coding can reproduce several properties associated with neuronal responses along the visual cortical hierarchy.
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Affiliation(s)
- Shirin Dora
- Cognitive and Systems Neuroscience Group, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, Netherlands.,Intelligent Systems Research Centre, Ulster University, Londonderry, United Kingdom
| | - Sander M Bohte
- Cognitive and Systems Neuroscience Group, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, Netherlands.,Machine Learning Group, Centre of Mathematics and Computer Science, Amsterdam, Netherlands
| | - Cyriel M A Pennartz
- Cognitive and Systems Neuroscience Group, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, Netherlands
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13
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Liu Y, Long X, Martin PR, Solomon SG, Gong P. Lévy walk dynamics explain gamma burst patterns in primate cerebral cortex. Commun Biol 2021; 4:739. [PMID: 34131276 PMCID: PMC8206356 DOI: 10.1038/s42003-021-02256-1] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2020] [Accepted: 05/21/2021] [Indexed: 11/21/2022] Open
Abstract
Lévy walks describe patterns of intermittent motion with variable step sizes. In complex biological systems, Lévy walks (non-Brownian, superdiffusive random walks) are associated with behaviors such as search patterns of animals foraging for food. Here we show that Lévy walks also describe patterns of oscillatory activity in primate cerebral cortex. We used a combination of empirical observation and modeling to investigate high-frequency (gamma band) local field potential activity in visual motion-processing cortical area MT of marmoset monkeys. We found that gamma activity is organized as localized burst patterns that propagate across the cortical surface with Lévy walk dynamics. Lévy walks are fundamentally different from either global synchronization, or regular propagating waves, because they include large steps that enable activity patterns to move rapidly over cortical modules. The presence of Lévy walk dynamics therefore represents a previously undiscovered mode of brain activity, and implies a novel way for the cortex to compute. We apply a biophysically realistic circuit model to explain that the Lévy walk dynamics arise from critical-state transitions between asynchronous and localized propagating wave states, and that these dynamics yield optimal spatial sampling of the cortical sheet. We hypothesise that Lévy walk dynamics could help the cortex to efficiently process variable inputs, and to find links in patterns of activity among sparsely spiking populations of neurons.
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Affiliation(s)
- Yuxi Liu
- School of Physics, University of Sydney, Sydney, NSW, Australia
- ARC Centre of Excellence for Integrative Brain Function, University of Sydney, Sydney, NSW, Australia
| | - Xian Long
- School of Physics, University of Sydney, Sydney, NSW, Australia
- ARC Centre of Excellence for Integrative Brain Function, University of Sydney, Sydney, NSW, Australia
| | - Paul R Martin
- ARC Centre of Excellence for Integrative Brain Function, University of Sydney, Sydney, NSW, Australia
- Discipline of Physiology, University of Sydney, Sydney, NSW, Australia
- Save Sight Institute, University of Sydney, Sydney, NSW, Australia
| | - Samuel G Solomon
- Department of Experimental Psychology, University College London, London, UK
| | - Pulin Gong
- School of Physics, University of Sydney, Sydney, NSW, Australia.
- ARC Centre of Excellence for Integrative Brain Function, University of Sydney, Sydney, NSW, Australia.
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14
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Modulation of Coordinated Activity across Cortical Layers by Plasticity of Inhibitory Synapses. Cell Rep 2021; 30:630-641.e5. [PMID: 31968242 PMCID: PMC6988114 DOI: 10.1016/j.celrep.2019.12.052] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2019] [Revised: 11/21/2019] [Accepted: 12/13/2019] [Indexed: 11/25/2022] Open
Abstract
In the neocortex, synaptic inhibition shapes all forms of spontaneous and sensory evoked activity. Importantly, inhibitory transmission is highly plastic, but the functional role of inhibitory synaptic plasticity is unknown. In the mouse barrel cortex, activation of layer (L) 2/3 pyramidal neurons (PNs) elicits strong feedforward inhibition (FFI) onto L5 PNs. We find that FFI involving parvalbumin (PV)-expressing cells is strongly potentiated by postsynaptic PN burst firing. FFI plasticity modifies the PN excitation-to-inhibition (E/I) ratio, strongly modulates PN gain, and alters information transfer across cortical layers. Moreover, our LTPi-inducing protocol modifies firing of L5 PNs and alters the temporal association of PN spikes to γ-oscillations both in vitro and in vivo. All of these effects are captured by unbalancing the E/I ratio in a feedforward inhibition circuit model. Altogether, our results indicate that activity-dependent modulation of perisomatic inhibitory strength effectively influences the participation of single principal cortical neurons to cognition-relevant network activity. Feedforward inhibition (FFI) of layer 5 pyramidal neurons (PNs) is highly plastic Long-term potentiation of FFI modulates spiking activity of layer 5 PNs LTPi affects information transfer across cortical layers The strength of LTPi determines the phase locking of PN firing to γ-oscillations
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15
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Jung F, Carlén M. Neuronal oscillations and the mouse prefrontal cortex. INTERNATIONAL REVIEW OF NEUROBIOLOGY 2021; 158:337-372. [PMID: 33785151 DOI: 10.1016/bs.irn.2020.11.005] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/05/2022]
Abstract
The mouse prefrontal cortex (PFC) encompasses a collection of agranual brain regions in the rostral neocortex and is considered to be critically involved in the neuronal computations underlying intentional behaviors. Flexible behavioral responses demand coordinated integration of sensory inputs with state, goal and memory information in brain-wide neuronal networks. Neuronal oscillations are proposed to provide a temporal scaffold for coordination of neuronal network activity and routing of information. In the present book chapter, we review findings on the role neuronal oscillations in prefrontal functioning, with a specific focus on research in mice. We discuss discoveries pertaining to local prefrontal processing, as well to interactions with other brain regions. We also discuss how the recent discovery of brain-wide respiration-entrained rhythms (RR) warrant re-evaluation of certain findings on slow oscillations (<10Hz) in prefrontal functioning.
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Affiliation(s)
- Felix Jung
- Department of Biosciences and Nutrition, Karolinska Institutet, Stockholm, Sweden
| | - Marie Carlén
- Department of Biosciences and Nutrition, Karolinska Institutet, Stockholm, Sweden; Department of Neuroscience, Karolinska Institutet, Stockholm, Sweden.
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16
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Zorrilla de San Martin J, Donato C, Peixoto J, Aguirre A, Choudhary V, De Stasi AM, Lourenço J, Potier MC, Bacci A. Alterations of specific cortical GABAergic circuits underlie abnormal network activity in a mouse model of Down syndrome. eLife 2020; 9:58731. [PMID: 32783810 PMCID: PMC7481006 DOI: 10.7554/elife.58731] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2020] [Accepted: 08/11/2020] [Indexed: 12/21/2022] Open
Abstract
Down syndrome (DS) results in various degrees of cognitive deficits. In DS mouse models, recovery of behavioral and neurophysiological deficits using GABAAR antagonists led to hypothesize an excessive activity of inhibitory circuits in this condition. Nonetheless, whether over-inhibition is present in DS and whether this is due to specific alterations of distinct GABAergic circuits is unknown. In the prefrontal cortex of Ts65Dn mice (a well-established DS model), we found that the dendritic synaptic inhibitory loop formed by somatostatin-positive Martinotti cells (MCs) and pyramidal neurons (PNs) was strongly enhanced, with no alteration in their excitability. Conversely, perisomatic inhibition from parvalbumin-positive (PV) interneurons was unaltered, but PV cells of DS mice lost their classical fast-spiking phenotype and exhibited increased excitability. These microcircuit alterations resulted in reduced pyramidal-neuron firing and increased phase locking to cognitive-relevant network oscillations in vivo. These results define important synaptic and circuit mechanisms underlying cognitive dysfunctions in DS. Down syndrome is a genetic disorder caused by the presence of a third copy of chromosome 21. Affected individuals show delayed growth, characteristic facial features, altered brain development; with mild to severe intellectual disability. The exact mechanisms underlying the intellectual disability in Down syndrome are unclear, although studies in mice have provided clues. Drugs that reduce the inhibitory activity in the brain improve cognition in a mouse model of Down syndrome. This suggests that excessive inhibitory activity may contribute to the cognitive impairments. Many different neural circuits generate inhibitory activity in the brain. These circuits contain cells called interneurons. Sub-types of interneurons act via different mechanisms to reduce the activity of neurons. Identifying the interneurons that are affected in Down syndrome would thus improve our understanding of the brain basis of the disorder. Zorrilla de San Martin et al. compared mice with Down syndrome to unaffected control mice. The results revealed an increased activity in two types of inhibitory brain circuits in Down syndrome. The first contains interneurons called Martinotti cells. These help the brain to combine inputs from different sources. The second contains interneurons called parvalbumin-positive basket cells. These help different areas of the brain to synchronize their activity, which in turn makes it easier for those areas to exchange information. By mapping the changes in inhibitory circuits in Down syndrome, Zorrilla de San Martin et al. have provided new insights into the biological basis of the disorder. Future studies should examine whether targeting specific circuits with pharmacological treatments could ultimately help reduce the associated impairments.
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Affiliation(s)
| | - Cristina Donato
- Institut du Cerveau (ICM), CNRS UMR 7225 - Inserm U1127, Sorbonne Université, Paris, France
| | - Jérémy Peixoto
- Institut du Cerveau (ICM), CNRS UMR 7225 - Inserm U1127, Sorbonne Université, Paris, France
| | - Andrea Aguirre
- Institut du Cerveau (ICM), CNRS UMR 7225 - Inserm U1127, Sorbonne Université, Paris, France
| | - Vikash Choudhary
- Institut du Cerveau (ICM), CNRS UMR 7225 - Inserm U1127, Sorbonne Université, Paris, France
| | | | - Joana Lourenço
- Institut du Cerveau (ICM), CNRS UMR 7225 - Inserm U1127, Sorbonne Université, Paris, France
| | - Marie-Claude Potier
- Institut du Cerveau (ICM), CNRS UMR 7225 - Inserm U1127, Sorbonne Université, Paris, France
| | - Alberto Bacci
- Institut du Cerveau (ICM), CNRS UMR 7225 - Inserm U1127, Sorbonne Université, Paris, France
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17
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Zhang R, Ballard DH. Parallel Neural Multiprocessing with Gamma Frequency Latencies. Neural Comput 2020; 32:1635-1663. [PMID: 32687771 DOI: 10.1162/neco_a_01301] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
The Poisson variability in cortical neural responses has been typically modeled using spike averaging techniques, such as trial averaging and rate coding, since such methods can produce reliable correlates of behavior. However, mechanisms that rely on counting spikes could be slow and inefficient and thus might not be useful in the brain for computations at timescales in the 10 millisecond range. This issue has motivated a search for alternative spike codes that take advantage of spike timing and has resulted in many studies that use synchronized neural networks for communication. Here we focus on recent studies that suggest that the gamma frequency may provide a reference that allows local spike phase representations that could result in much faster information transmission. We have developed a unified model (gamma spike multiplexing) that takes advantage of a single cycle of a cell's somatic gamma frequency to modulate the generation of its action potentials. An important consequence of this coding mechanism is that it allows multiple independent neural processes to run in parallel, thereby greatly increasing the processing capability of the cortex. System-level simulations and preliminary analysis of mouse cortical cell data are presented as support for the proposed theoretical model.
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Affiliation(s)
- Ruohan Zhang
- Department of Computer Science, University of Texas at Austin, Austin, TX 78712, U.S.A.
| | - Dana H Ballard
- Department of Computer Science, University of Texas at Austin, Austin, TX 78712, U.S.A.
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18
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Straub B, Schneider G. A Model for the Study of the Increase in Stimulus and Change Point Detection with Small and Variable Spiking Delays. Neural Comput 2020; 32:1277-1321. [PMID: 32433899 DOI: 10.1162/neco_a_01285] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
Precise timing of spikes between different neurons has been found to convey reliable information beyond the spike count. In contrast, the role of small and variable spiking delays, as reported, for example, in the visual cortex, remains largely unclear. This issue becomes particularly important considering the high speed of neuronal information processing, which is assumed to be based on only a few milliseconds within each processing step. We investigate the role of small and variable spiking delays with a parsimonious stochastic spiking model that is strongly motivated by experimental observations. The model contains only two parameters for the response of a neuron to one stimulus, describing directly the rate and the delay, or phase. Within the theoretical model, we specifically investigate two quantities, the probability of correct stimulus detection and the probability of correct change point detection, as a function of these parameters and within short periods of time. Optimal combinations of the two parameters across stimuli are derived that maximize these probabilities and enable comparison of pure rate, pure phase, and combined codes. In particular, the gain in correct detection probability when adding small and variable spiking delays to pure rate coding increases with the number of stimuli. More interesting, small and variable spiking delays can considerably improve the process of detecting changes in the stimulus, while also decreasing the probability of false alarms and thus increasing robustness and speed of change point detection. The results are compared to empirical spike train recordings of neurons in the visual cortex reported earlier in response to a number of visual stimuli. The results suggest that near-optimal combinations of rate and phase parameters may be implemented in the brain and that adding phase information could particularly increase the quality of change point detection in cases of highly similar stimuli.
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Affiliation(s)
- Benjamin Straub
- Institute of Mathematics, Johann Wolfgang Goethe University, Frankfurt (Main) 60325, Germany
| | - Gaby Schneider
- Institute of Mathematics, Johann Wolfgang Goethe University, Frankfurt (Main) 60325, Germany
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19
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Shunting Inhibition Improves Synchronization in Heterogeneous Inhibitory Interneuronal Networks with Type 1 Excitability Whereas Hyperpolarizing Inhibition Is Better for Type 2 Excitability. eNeuro 2020; 7:ENEURO.0464-19.2020. [PMID: 32198159 PMCID: PMC7210489 DOI: 10.1523/eneuro.0464-19.2020] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2019] [Revised: 03/01/2020] [Accepted: 03/10/2020] [Indexed: 11/27/2022] Open
Abstract
All-to-all homogeneous networks of inhibitory neurons synchronize completely under the right conditions; however, many modeling studies have shown that biological levels of heterogeneity disrupt synchrony. Our fundamental scientific question is “how can neurons maintain partial synchrony in the presence of heterogeneity and noise?” A particular subset of strongly interconnected interneurons, the PV+ fast-spiking (FS) basket neurons, are strongly implicated in γ oscillations and in phase locking of nested γ oscillations to theta. Their excitability type apparently varies between brain regions: in CA1 and the dentate gyrus they have type 1 excitability, meaning that they can fire arbitrarily slowly, whereas in the striatum and cortex they have type 2 excitability, meaning that there is a frequency thresh old below which they cannot sustain repetitive firing. We constrained the models to study the effect of excitability type (more precisely bifurcation type) in isolation from all other factors. We use sparsely connected, heterogeneous, noisy networks with synaptic delays to show that synchronization properties, namely the resistance to suppression and the strength of theta phase to γ amplitude coupling, are strongly dependent on the pairing of excitability type with the type of inhibition. Shunting inhibition performs better for type 1 and hyperpolarizing inhibition for type 2. γ Oscillations and their nesting within theta oscillations are thought to subserve cognitive functions like memory encoding and recall; therefore, it is important to understand the contribution of intrinsic properties to these rhythms.
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20
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Onorato I, Neuenschwander S, Hoy J, Lima B, Rocha KS, Broggini AC, Uran C, Spyropoulos G, Klon-Lipok J, Womelsdorf T, Fries P, Niell C, Singer W, Vinck M. A Distinct Class of Bursting Neurons with Strong Gamma Synchronization and Stimulus Selectivity in Monkey V1. Neuron 2019; 105:180-197.e5. [PMID: 31732258 DOI: 10.1016/j.neuron.2019.09.039] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2019] [Revised: 07/12/2019] [Accepted: 09/23/2019] [Indexed: 12/12/2022]
Abstract
Cortical computation depends on interactions between excitatory and inhibitory neurons. The contributions of distinct neuron types to sensory processing and network synchronization in primate visual cortex remain largely undetermined. We show that in awake monkey V1, there exists a distinct cell type (››30% of neurons) that has narrow-waveform (NW) action potentials and high spontaneous discharge rates and fires in high-frequency bursts. These neurons are more stimulus selective and phase locked to 30- to 80-Hz gamma oscillations than other neuron types. Unlike other neuron types, their gamma-phase locking is highly predictive of orientation tuning. We find evidence for strong rhythmic inhibition in these neurons, suggesting that they interact with interneurons to act as excitatory pacemakers for the V1 gamma rhythm. We did not find a similar class of NW bursting neurons in L2-L4 of mouse V1. Given its properties, this class of NW bursting neurons should be pivotal for the encoding and transmission of stimulus information.
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Affiliation(s)
- Irene Onorato
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany; International Max Planck Research School for Neural Circuits, Frankfurt am Main, Germany
| | - Sergio Neuenschwander
- Max Planck Institute for Brain Research, Frankfurt, Germany; Brain Institute, Federal University of Rio Grande do Norte, Natal, Brazil
| | - Jennifer Hoy
- Institute of Neuroscience and Department of Biology, University of Oregon, Eugene, OR, USA
| | - Bruss Lima
- Max Planck Institute for Brain Research, Frankfurt, Germany
| | - Katia-Simone Rocha
- Brain Institute, Federal University of Rio Grande do Norte, Natal, Brazil
| | - Ana Clara Broggini
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany
| | - Cem Uran
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany
| | - Georgios Spyropoulos
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany; International Max Planck Research School for Neural Circuits, Frankfurt am Main, Germany
| | - Johanna Klon-Lipok
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany; Max Planck Institute for Brain Research, Frankfurt, Germany
| | | | - Pascal Fries
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany
| | - Cristopher Niell
- Institute of Neuroscience and Department of Biology, University of Oregon, Eugene, OR, USA
| | - Wolf Singer
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany; Max Planck Institute for Brain Research, Frankfurt, Germany; Frankfurt Institute for Advanced Studies, Frankfurt, Germany
| | - Martin Vinck
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany.
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21
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Olcese U, Bos JJ, Vinck M, Pennartz CMA. Functional determinants of enhanced and depressed interareal information flow in nonrapid eye movement sleep between neuronal ensembles in rat cortex and hippocampus. Sleep 2019; 41:5078618. [PMID: 30423179 DOI: 10.1093/sleep/zsy167] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2018] [Indexed: 11/12/2022] Open
Abstract
Compared with wakefulness, neuronal activity during nonrapid eye movement (NREM) sleep is characterized by a decreased ability to integrate information, but also by the reemergence of task-related information patterns. To investigate the mechanisms underlying these seemingly opposing phenomena, we measured directed information flow by computing transfer entropy between neuronal spiking activity in three cortical regions and the hippocampus of rats across brain states. State-dependent information flow was jointly determined by the anatomical distance between neurons and by their functional specialization. We distinguished two regimes, operating at short and long time scales, respectively. From wakefulness to NREM sleep, transfer entropy at short time scales increased for interareal connections between neurons showing behavioral task correlates. Conversely, transfer entropy at long time scales became stronger between nontask modulated neurons and weaker between task-modulated neurons. These results may explain how, during NREM sleep, a global interareal disconnection is compatible with highly specific task-related information transfer.
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Affiliation(s)
- Umberto Olcese
- Cognitive and Systems Neuroscience Group, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, The Netherlands
| | - Jeroen J Bos
- Cognitive and Systems Neuroscience Group, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, The Netherlands
| | - Martin Vinck
- Cognitive and Systems Neuroscience Group, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, The Netherlands.,Ernst Strungmann Institute for Neuroscience in Cooperation with Max Planck Society, Frankfurt am Main, Germany
| | - Cyriel M A Pennartz
- Cognitive and Systems Neuroscience Group, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, The Netherlands
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22
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Deleuze C, Bhumbra GS, Pazienti A, Lourenço J, Mailhes C, Aguirre A, Beato M, Bacci A. Strong preference for autaptic self-connectivity of neocortical PV interneurons facilitates their tuning to γ-oscillations. PLoS Biol 2019; 17:e3000419. [PMID: 31483783 PMCID: PMC6726197 DOI: 10.1371/journal.pbio.3000419] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2018] [Accepted: 08/05/2019] [Indexed: 12/23/2022] Open
Abstract
Parvalbumin (PV)-positive interneurons modulate cortical activity through highly specialized connectivity patterns onto excitatory pyramidal neurons (PNs) and other inhibitory cells. PV cells are autoconnected through powerful autapses, but the contribution of this form of fast disinhibition to cortical function is unknown. We found that autaptic transmission represents the most powerful inhibitory input of PV cells in neocortical layer V. Autaptic strength was greater than synaptic strength onto PNs as a result of a larger quantal size, whereas autaptic and heterosynaptic PV-PV synapses differed in the number of release sites. Overall, single-axon autaptic transmission contributed to approximately 40% of the global inhibition (mostly perisomatic) that PV interneurons received. The strength of autaptic transmission modulated the coupling of PV-cell firing with optogenetically induced γ-oscillations, preventing high-frequency bursts of spikes. Autaptic self-inhibition represents an exceptionally large and fast disinhibitory mechanism, favoring synchronization of PV-cell firing during cognitive-relevant cortical network activity. Parvalbumin-positive interneurons modulate cortical activity via highly specialized connections to excitatory pyramidal neurons and other inhibitory cells. However, this study shows that fast autaptic self-inhibition is the major output of parvalbumin-positive basket cells in the neocortex and serves to modulate phase-locking of these interneurons during gamma-oscillations.
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Affiliation(s)
- Charlotte Deleuze
- ICM-Institut du Cerveau et de la Moelle épinière, Inserm U1127, CNRS UMR 7225, Sorbonne Université, Paris, France
| | - Gary S Bhumbra
- Department of Neuroscience, Physiology and Pharmacology, University College London, London, United Kingdom
| | | | - Joana Lourenço
- ICM-Institut du Cerveau et de la Moelle épinière, Inserm U1127, CNRS UMR 7225, Sorbonne Université, Paris, France
| | - Caroline Mailhes
- ICM-Institut du Cerveau et de la Moelle épinière, Inserm U1127, CNRS UMR 7225, Sorbonne Université, Paris, France
| | - Andrea Aguirre
- ICM-Institut du Cerveau et de la Moelle épinière, Inserm U1127, CNRS UMR 7225, Sorbonne Université, Paris, France
| | - Marco Beato
- Department of Neuroscience, Physiology and Pharmacology, University College London, London, United Kingdom
| | - Alberto Bacci
- ICM-Institut du Cerveau et de la Moelle épinière, Inserm U1127, CNRS UMR 7225, Sorbonne Université, Paris, France
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23
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Vinck M, Perrenoud Q. Layers of Rhythms - from Cortical Anatomy to Dynamics. Neuron 2019; 101:358-360. [PMID: 30731056 DOI: 10.1016/j.neuron.2019.01.028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Abstract
The activity of the cerebral cortex patterns into recurring dynamic motifs. In the present issue of Neuron, Senzai et al. (2019) elucidate how these motifs recruit excitatory and inhibitory neurons across cortical layers and how brain state modulates laminar interactions.
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Affiliation(s)
- Martin Vinck
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany.
| | - Quentin Perrenoud
- Department of Neuroscience, Kavli Institute, Yale University, School of Medicine, New Haven, CT, USA.
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Chen G, Zhang Y, Li X, Zhao X, Ye Q, Lin Y, Tao HW, Rasch MJ, Zhang X. Distinct Inhibitory Circuits Orchestrate Cortical beta and gamma Band Oscillations. Neuron 2019; 96:1403-1418.e6. [PMID: 29268099 DOI: 10.1016/j.neuron.2017.11.033] [Citation(s) in RCA: 214] [Impact Index Per Article: 35.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2017] [Revised: 09/25/2017] [Accepted: 11/20/2017] [Indexed: 12/29/2022]
Abstract
Distinct subtypes of inhibitory interneuron are known to shape diverse rhythmic activities in the cortex, but how they interact to orchestrate specific band activity remains largely unknown. By recording optogenetically tagged interneurons of specific subtypes in the primary visual cortex of behaving mice, we show that spiking of somatostatin (SOM)- and parvalbumin (PV)-expressing interneurons preferentially correlates with cortical beta and gamma band oscillations, respectively. Suppression of SOM cell spiking reduces the spontaneous low-frequency band (<30-Hz) oscillations and selectively reduces visually induced enhancement of beta oscillation. In comparison, suppressing PV cell activity elevates the synchronization of spontaneous activity across a broad frequency range and further precludes visually induced changes in beta and gamma oscillations. Rhythmic activation of SOM and PV cells in the local circuit entrains resonant activity in the narrow 5- to 30-Hz band and the wide 20- to 80-Hz band, respectively. Together, these findings reveal differential and cooperative roles of SOM and PV inhibitory neurons in orchestrating specific cortical oscillations.
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Affiliation(s)
- Guang Chen
- State Key Laboratory of Cognitive Neuroscience & Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China; Institute of Neuroscience, Chinese Academy of Sciences, Shanghai 200031, China
| | - Yuan Zhang
- State Key Laboratory of Cognitive Neuroscience & Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China
| | - Xiang Li
- State Key Laboratory of Cognitive Neuroscience & Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China
| | - Xiaochen Zhao
- State Key Laboratory of Cognitive Neuroscience & Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China
| | - Qian Ye
- State Key Laboratory of Cognitive Neuroscience & Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China
| | - Yingxi Lin
- McGovern Institute for Brain Research, Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Huizhong W Tao
- Zilkha Neurogenetic Institute, Department of Cell and Neurobiology, Keck School of Medicine, University of Southern California, Los Angeles, CA 90033, USA
| | - Malte J Rasch
- State Key Laboratory of Cognitive Neuroscience & Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China.
| | - Xiaohui Zhang
- State Key Laboratory of Cognitive Neuroscience & Learning, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China.
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25
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Peter A, Uran C, Klon-Lipok J, Roese R, van Stijn S, Barnes W, Dowdall JR, Singer W, Fries P, Vinck M. Surface color and predictability determine contextual modulation of V1 firing and gamma oscillations. eLife 2019; 8:42101. [PMID: 30714900 PMCID: PMC6391066 DOI: 10.7554/elife.42101] [Citation(s) in RCA: 46] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2018] [Accepted: 01/30/2019] [Indexed: 12/03/2022] Open
Abstract
The integration of direct bottom-up inputs with contextual information is a core feature of neocortical circuits. In area V1, neurons may reduce their firing rates when their receptive field input can be predicted by spatial context. Gamma-synchronized (30–80 Hz) firing may provide a complementary signal to rates, reflecting stronger synchronization between neuronal populations receiving mutually predictable inputs. We show that large uniform surfaces, which have high spatial predictability, strongly suppressed firing yet induced prominent gamma synchronization in macaque V1, particularly when they were colored. Yet, chromatic mismatches between center and surround, breaking predictability, strongly reduced gamma synchronization while increasing firing rates. Differences between responses to different colors, including strong gamma-responses to red, arose from stimulus adaptation to a full-screen background, suggesting prominent differences in adaptation between M- and L-cone signaling pathways. Thus, synchrony signaled whether RF inputs were predicted from spatial context, while firing rates increased when stimuli were unpredicted from context.
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Affiliation(s)
- Alina Peter
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany.,International Max Planck Research School for Neural Circuits, Frankfurt, Germany
| | - Cem Uran
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany
| | - Johanna Klon-Lipok
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany.,Max Planck Institute for Brain Research, Frankfurt, Germany
| | - Rasmus Roese
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany
| | - Sylvia van Stijn
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany.,Max Planck Institute for Brain Research, Frankfurt, Germany
| | - William Barnes
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany
| | - Jarrod R Dowdall
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany
| | - Wolf Singer
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany.,Frankfurt Institute for Advanced Studies, Frankfurt, Germany
| | - Pascal Fries
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany.,Donders Institute for Brain, Cognition and Behaviour, Radboud University Nijmegen, Nijmegen, Netherlands
| | - Martin Vinck
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Frankfurt, Germany
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26
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Voltage-Dependent Membrane Properties Shape the Size But Not the Frequency Content of Spontaneous Voltage Fluctuations in Layer 2/3 Somatosensory Cortex. J Neurosci 2019; 39:2221-2237. [PMID: 30655351 DOI: 10.1523/jneurosci.1648-18.2019] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2018] [Revised: 12/30/2018] [Accepted: 01/09/2019] [Indexed: 01/18/2023] Open
Abstract
Under awake and idling conditions, spontaneous intracellular membrane voltage is characterized by large, synchronous, low-frequency fluctuations. Although these properties reflect correlations in synaptic inputs, intrinsic membrane properties often indicate voltage-dependent changes in membrane resistance and time constant values that can amplify and help to generate low-frequency voltage fluctuations. The specific contribution of intrinsic and synaptic factors to the generation of spontaneous fluctuations, however, remains poorly understood. Using visually guided intracellular recordings of somatosensory layer 2/3 pyramidal cells and interneurons in awake male and female mice, we measured the spectrum and size of voltage fluctuation and intrinsic cellular properties at different voltages. In both cell types, depolarizing neurons increased the size of voltage fluctuations. Amplitude changes scaled with voltage-dependent changes in membrane input resistance. Because of the small membrane time constants observed in both pyramidal cells and interneuron cell bodies, the low-frequency content of membrane fluctuations reflects correlations in the synaptic current inputs rather than significant filtering associated with membrane capacitance. Further, blocking synaptic inputs minimally altered somatic membrane resistance and time constant values. Overall, these results indicate that spontaneous synaptic inputs generate a low-conductance state in which the amplitude, but not frequency structure, is influenced by intrinsic membrane properties.SIGNIFICANCE STATEMENT In the absence of sensory drive, cortical activity in awake animals is associated with self-generated and seemingly random membrane voltage fluctuations characterized by large amplitude and low frequency. Partially, these properties reflect correlations in synaptic input. Nonetheless, neurons express voltage-dependent intrinsic properties that can potentially influence the amplitude and frequency of spontaneous activity. Using visually guided intracellular recordings of cortical neurons in awake mice, we measured the voltage dependence of spontaneous voltage fluctuations and intrinsic membrane properties. We show that voltage-dependent changes in membrane resistance amplify synaptic activity, whereas the frequency of voltage fluctuations reflects correlations in synaptic inputs. Last, synaptic activity has a small impact on intrinsic membrane properties in both pyramidal cells and interneurons.
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27
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Ghaderi P, Marateb HR, Safari MS. Electrophysiological Profiling of Neocortical Neural Subtypes: A Semi-Supervised Method Applied to in vivo Whole-Cell Patch-Clamp Data. Front Neurosci 2018; 12:823. [PMID: 30542256 PMCID: PMC6277855 DOI: 10.3389/fnins.2018.00823] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2018] [Accepted: 10/22/2018] [Indexed: 12/30/2022] Open
Abstract
A lot of efforts have been made to understand the structure and function of neocortical circuits. In fact, a promising way to understand the functions of cortical circuits is the classification of the neural types, based on their different properties. Recent studies focused on applying modern computational methods to classify neurons based on molecular, morphological, physiological, or mixed of these criteria. Although there are studies in the literature on in vitro/vivo extracellular or in vitro intracellular recordings, a study on the classification of neuronal types using in vivo whole-cell patch-clamp recordings is still lacking. We thus proposed a novel semi-supervised classification method based on waveform shape of neurons' spikes using in vivo whole-cell patch-clamp recordings. We, first, detected spike candidates. Then discriminative features were extracted from the time samples of the spikes using discrete cosine transform. We then extracted the center of clusters using fuzzy c-mean clustering and finally, the neurons were classified using the minimum distance classifier. We distinguished three types of neurons: excitatory pyramidal cells (Pyr) and two types of inhibitory neurons: GABAergic- parvalbumin positive (PV), and somatostatin positive (SST) non-pyramidal cells in layer II/III of the mice primary visual cortex. We used 10-fold cross validation in our study. The classification accuracy for PV, Pyr, and SST was 91.59 ± 1.69, 97.47 ± 0.67, and 89.06 ± 1.99, respectively. Overall, the algorithm correctly classified 92.67 ± 0.54% of the cells, confirming the relative robustness of the discriminant functions. The performance of the method was further assessed on in vitro recordings by using a pool of 50 neurons from Allen institute Cell Types Database (5 major subtypes of neurons: Pyr, PV, SST, 5HT3a, and vasoactive intestinal peptide (VIP) cells). Its overall accuracy was 84.13 ± 0.81% on this data set using cross validation framework. The proposed algorithm is thus a promising new tool in recognizing cell's type with high accuracy in laboratories using in vivo/vitro whole-cell patch-clamp recording technique. The developed programs and the entire dataset are available online to interested readers.
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Affiliation(s)
- Parviz Ghaderi
- Neuroscience Research Center, Shahid Beheshti University of Medical Science, Tehran, Iran
| | - Hamid Reza Marateb
- Biomedical Engineering Department, Engineering Faculty, University of Isfahan, Isfahan, Iran
| | - Mir-Shahram Safari
- Neuroscience Research Center, Shahid Beheshti University of Medical Science, Tehran, Iran.,Brain Science Institute, RIKEN, Wako, Japan.,Brain Future Institute, Tehran, Iran
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28
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Nazari S, Faez K, Janahmadi M. A new approach to detect the coding rule of the cortical spiking model in the information transmission. Neural Netw 2018; 99:68-78. [PMID: 29355733 DOI: 10.1016/j.neunet.2017.12.009] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2017] [Revised: 12/11/2017] [Accepted: 12/19/2017] [Indexed: 10/18/2022]
Abstract
Investigation of the role of the local field potential (LFP) fluctuations in encoding the received sensory information by the nervous system remains largely unknown. On the other hand, transmission of these translation rules in information transmission between the structure of sensory stimuli and the cortical oscillations to the bio-inspired artificial neural networks operating at the efficiency of the nervous system is still a vague puzzle. In order to move towards this important goal, computational neuroscience tools can be useful so, we simulated a large-scale network of excitatory and inhibitory spiking neurons with synaptic connections consisting of AMPA and GABA currents as a model of cortical populations. Spiking network was equipped with spike-based unsupervised weight optimization based on the dynamical behavior of the excitatory (AMPA) and inhibitory (GABA) synapses using Spike Timing Dependent Plasticity (STDP) on the MNIST benchmark and we specified how the generated LFP by the network contained information about input patterns. The main result of this article is that the calculated coefficients of Prolate spheroidal wave functions (PSWF) from the input pattern with mean square error (MSE) criterion and power spectrum of LFP with maximum correntropy criterion (MCC) are equal. The more important result is that 82.3% of PSWF coefficients are the same as the connecting weights of the cortical neurons to the classifying neurons after the completion of the training process. Higher compliance percentage of coefficients with synaptic weights (82.3%) gives the expectance us that this coding rule will be able to extend to biological systems. Eventually, we introduced the cortical spiking network as an information channel, which transmits the information of the input pattern in the form of PSWF coefficients to the power spectrum of the output generated LFP.
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29
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Adesnik H. Synaptic Mechanisms of Feature Coding in the Visual Cortex of Awake Mice. Neuron 2017; 95:1147-1159.e4. [PMID: 28858618 DOI: 10.1016/j.neuron.2017.08.014] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2017] [Revised: 07/13/2017] [Accepted: 08/08/2017] [Indexed: 10/19/2022]
Abstract
The synaptic mechanisms of feature coding in the visual cortex are poorly understood, particularly in awake animals. The ratio between excitation (E) and inhibition (I) might be constant across stimulus space, controlling only the gain and timing of neuronal responses, or it might change, directly contributing to feature coding. Whole-cell recordings in L2/3 of awake mice revealed that the E/I ratio systematically declines with increasing stimulus contrast or size. Suppressing somatostatin (SOM) neurons enhanced the E and I underlying size tuning, explaining SOM neurons' role in surround suppression. These data imply that contrast and size tuning result from a combination of a changing E/I ratio and the tuning of total synaptic input. Furthermore, they provide experimental support in awake animals for the "Stabilized Supralinear Network," a model that explains diverse cortical phenomena, and suggest that a decreasing E/I ratio with increasing cortical drive could contribute to many different cortical computations.
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Affiliation(s)
- Hillel Adesnik
- Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720 USA; Helen Wills Neuroscience Institute, University of California, Berkeley, Berkeley, CA 94720 USA.
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30
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Hoseini MS, Pobst J, Wright N, Clawson W, Shew W, Wessel R. Induced cortical oscillations in turtle cortex are coherent at the mesoscale of population activity, but not at the microscale of the membrane potential of neurons. J Neurophysiol 2017; 118:2579-2591. [PMID: 28794194 DOI: 10.1152/jn.00375.2017] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2017] [Revised: 08/04/2017] [Accepted: 08/06/2017] [Indexed: 01/30/2023] Open
Abstract
Bursts of oscillatory neural activity have been hypothesized to be a core mechanism by which remote brain regions can communicate. Such a hypothesis raises the question to what extent oscillations are coherent across spatially distant neural populations. To address this question, we obtained local field potential (LFP) and membrane potential recordings from the visual cortex of turtle in response to visual stimulation of the retina. The time-frequency analysis of these recordings revealed pronounced bursts of oscillatory neural activity and a large trial-to-trial variability in the spectral and temporal properties of the observed oscillations. First, local bursts of oscillations varied from trial to trial in both burst duration and peak frequency. Second, oscillations of a given recording site were not autocoherent; i.e., the phase did not progress linearly in time. Third, LFP oscillations at spatially separate locations within the visual cortex were more phase coherent in the presence of visual stimulation than during ongoing activity. In contrast, the membrane potential oscillations from pairs of simultaneously recorded pyramidal neurons showed smaller phase coherence, which did not change when switching from black screen to visual stimulation. In conclusion, neuronal oscillations at distant locations in visual cortex are coherent at the mesoscale of population activity, but coherence is largely absent at the microscale of the membrane potential of neurons.NEW & NOTEWORTHY Coherent oscillatory neural activity has long been hypothesized as a potential mechanism for communication across locations in the brain. In this study we confirm the existence of coherent oscillations at the mesoscale of integrated cortical population activity. However, at the microscopic level of neurons, we find no evidence for coherence among oscillatory membrane potential fluctuations. These results raise questions about the applicability of the communication through coherence hypothesis to the level of the membrane potential.
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Affiliation(s)
- Mahmood S Hoseini
- Department of Physics, Washington University, Saint Louis, Missouri;
| | - Jeff Pobst
- Department of Physics, Washington University, Saint Louis, Missouri
| | - Nathaniel Wright
- Department of Physics, Washington University, Saint Louis, Missouri
| | - Wesley Clawson
- Department of Electrical Engineering, University of Arkansas, Fayetteville, Arkansas; and
| | - Woodrow Shew
- Department of Physics, University of Arkansas, Fayetteville, Arkansas
| | - Ralf Wessel
- Department of Physics, Washington University, Saint Louis, Missouri
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31
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Hermes D, Nguyen M, Winawer J. Neuronal synchrony and the relation between the blood-oxygen-level dependent response and the local field potential. PLoS Biol 2017; 15:e2001461. [PMID: 28742093 PMCID: PMC5524566 DOI: 10.1371/journal.pbio.2001461] [Citation(s) in RCA: 56] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2016] [Accepted: 06/22/2017] [Indexed: 01/07/2023] Open
Abstract
The most widespread measures of human brain activity are the blood-oxygen-level dependent (BOLD) signal and surface field potential. Prior studies report a variety of relationships between these signals. To develop an understanding of how to interpret these signals and the relationship between them, we developed a model of (a) neuronal population responses and (b) transformations from neuronal responses into the functional magnetic resonance imaging (fMRI) BOLD signal and electrocorticographic (ECoG) field potential. Rather than seeking a transformation between the two measures directly, this approach interprets each measure with respect to the underlying neuronal population responses. This model accounts for the relationship between BOLD and ECoG data from human visual cortex in V1, V2, and V3, with the model predictions and data matching in three ways: across stimuli, the BOLD amplitude and ECoG broadband power were positively correlated, the BOLD amplitude and alpha power (8-13 Hz) were negatively correlated, and the BOLD amplitude and narrowband gamma power (30-80 Hz) were uncorrelated. The two measures provide complementary information about human brain activity, and we infer that features of the field potential that are uncorrelated with BOLD arise largely from changes in synchrony, rather than level, of neuronal activity.
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Affiliation(s)
- Dora Hermes
- Department of Psychology, New York University, New York, New York, United States of America
- Brain Center Rudolf Magnus, Department of Neurology & Neurosurgery, University Medical Center Utrecht, Utrecht, the Netherlands
- Department of Psychology, Stanford University, Stanford, California, United States of America
| | - Mai Nguyen
- Department of Psychology, Princeton University, Princeton, New Jersey, United States of America
| | - Jonathan Winawer
- Department of Psychology, New York University, New York, New York, United States of America
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32
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Cortical gamma band synchronization through somatostatin interneurons. Nat Neurosci 2017; 20:951-959. [PMID: 28481348 PMCID: PMC5511041 DOI: 10.1038/nn.4562] [Citation(s) in RCA: 245] [Impact Index Per Article: 30.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2016] [Accepted: 04/18/2017] [Indexed: 12/11/2022]
Abstract
Gamma band rhythms may synchronize distributed cell assemblies to facilitate information transfer within and across brain areas, yet their underlying mechanisms remain hotly debated. Most circuit models postulate that soma-targeting parvalbumin-positive GABAergic neurons are the essential inhibitory neuron subtype necessary for gamma rhythms. Using cell-type-specific optogenetic manipulations in behaving animals, we show that dendrite-targeting somatostatin (SOM) interneurons are critical for a visually induced, context-dependent gamma rhythm in visual cortex. A computational model independently predicts that context-dependent gamma rhythms depend critically on SOM interneurons. Further in vivo experiments show that SOM neurons are required for long-distance coherence across the visual cortex. Taken together, these data establish an alternative mechanism for synchronizing distributed networks in visual cortex. By operating through dendritic and not just somatic inhibition, SOM-mediated oscillations may expand the computational power of gamma rhythms for optimizing the synthesis and storage of visual perceptions.
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33
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Ter Wal M, Tiesinga PH. Phase Difference between Model Cortical Areas Determines Level of Information Transfer. Front Comput Neurosci 2017; 11:6. [PMID: 28232796 PMCID: PMC5298997 DOI: 10.3389/fncom.2017.00006] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2016] [Accepted: 01/24/2017] [Indexed: 11/23/2022] Open
Abstract
Communication between cortical sites is mediated by long-range synaptic connections. However, these connections are relatively static, while everyday cognitive tasks demand a fast and flexible routing of information in the brain. Synchronization of activity between distant cortical sites has been proposed as the mechanism underlying such a dynamic communication structure. Here, we study how oscillatory activity affects the excitability and input-output relation of local cortical circuits and how it alters the transmission of information between cortical circuits. To this end, we develop model circuits showing fast oscillations by the PING mechanism, of which the oscillatory characteristics can be altered. We identify conditions for synchronization between two brain circuits and show that the level of intercircuit coherence and the phase difference is set by the frequency difference between the intrinsic oscillations. We show that the susceptibility of the circuits to inputs, i.e., the degree of change in circuit output following input pulses, is not uniform throughout the oscillation period and that both firing rate, frequency and power are differentially modulated by inputs arriving at different phases. As a result, an appropriate phase difference between the circuits is critical for the susceptibility windows of the circuits in the network to align and for information to be efficiently transferred. We demonstrate that changes in synchrony and phase difference can be used to set up or abolish information transfer in a network of cortical circuits.
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Affiliation(s)
- Marije Ter Wal
- Department of Neuroinformatics, Donders Institute, Radboud University Nijmegen, Netherlands
| | - Paul H Tiesinga
- Department of Neuroinformatics, Donders Institute, Radboud University Nijmegen, Netherlands
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34
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Headley DB, Paré D. Common oscillatory mechanisms across multiple memory systems. NPJ SCIENCE OF LEARNING 2017; 2:1. [PMID: 30294452 PMCID: PMC6171763 DOI: 10.1038/s41539-016-0001-2] [Citation(s) in RCA: 55] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/29/2016] [Revised: 11/03/2016] [Accepted: 11/16/2016] [Indexed: 05/09/2023]
Abstract
The cortex, hippocampus, and striatum support dissociable forms of memory. While each of these regions contains specialized circuitry supporting their respective functions, all structure their activities across time with delta, theta, and gamma rhythms. We review how these oscillations are generated and how they coordinate distinct memory systems during encoding, consolidation, and retrieval. First, gamma oscillations occur in all regions and coordinate local spiking, compressing it into short population bursts. Second, gamma oscillations are modulated by delta and theta oscillations. Third, oscillatory dynamics in these memory systems can operate in either a 'slow' or 'fast' mode. The slow mode happens during slow-wave sleep (SWS) and is characterized by large irregular activity in the hippocampus and delta oscillations in cortical and striatal circuits. The fast mode occurs during active waking and REM and is characterized by theta oscillations in the hippocampus and its targets, along with gamma oscillations in the rest of cortex. In waking, the fast mode is associated with the efficacious encoding and retrieval of declarative and procedural memories. Theta and gamma oscillations have the similar relationships with encoding and retrieval across multiple forms of memory and brain regions, despite regional differences in microcircuitry and information content. Differences in the oscillatory coordination of memory systems during sleep might explain why the consolidation of some forms of memory is sensitive to SWS, while others depend on REM. In particular, theta oscillations appear to support the consolidation of certain types of procedural memories during REM, while delta oscillations during SWS seem to promote declarative and procedural memories.
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Affiliation(s)
- Drew B. Headley
- Center for Molecular and Behavioral Neuroscience, Rutgers University, Newark, NJ 07102 USA
| | - Denis Paré
- Center for Molecular and Behavioral Neuroscience, Rutgers University, Newark, NJ 07102 USA
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35
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Cardin JA. Snapshots of the Brain in Action: Local Circuit Operations through the Lens of γ Oscillations. J Neurosci 2016; 36:10496-10504. [PMID: 27733601 PMCID: PMC5059425 DOI: 10.1523/jneurosci.1021-16.2016] [Citation(s) in RCA: 64] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2016] [Revised: 06/17/2016] [Accepted: 07/23/2016] [Indexed: 11/21/2022] Open
Abstract
γ oscillations (20-80 Hz) are associated with sensory processing, cognition, and memory, and focused attention in animals and humans. γ activity can arise from several neural mechanisms in the cortex and hippocampus and can vary across circuits, behavioral states, and developmental stages. γ oscillations are nonstationary, typically occurring in short bouts, and the peak frequency of this rhythm is modulated by stimulus parameters. In addition, the participation of excitatory and inhibitory neurons in the γ rhythm varies across local circuits and conditions, particularly in the cortex. Although these dynamics present a challenge to interpreting the functional role of γ oscillations, these patterns of activity emerge from synaptic interactions among excitatory and inhibitory neurons and thus provide important insight into local circuit operations.
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Affiliation(s)
- Jessica A Cardin
- Department of Neuroscience and Kavli Institute, Yale University, New Haven, Connecticut 06520
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36
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Vinck M, Bosman CA. More Gamma More Predictions: Gamma-Synchronization as a Key Mechanism for Efficient Integration of Classical Receptive Field Inputs with Surround Predictions. Front Syst Neurosci 2016; 10:35. [PMID: 27199684 PMCID: PMC4842768 DOI: 10.3389/fnsys.2016.00035] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2016] [Accepted: 04/04/2016] [Indexed: 11/15/2022] Open
Abstract
During visual stimulation, neurons in visual cortex often exhibit rhythmic and synchronous firing in the gamma-frequency (30–90 Hz) band. Whether this phenomenon plays a functional role during visual processing is not fully clear and remains heavily debated. In this article, we explore the function of gamma-synchronization in the context of predictive and efficient coding theories. These theories hold that sensory neurons utilize the statistical regularities in the natural world in order to improve the efficiency of the neural code, and to optimize the inference of the stimulus causes of the sensory data. In visual cortex, this relies on the integration of classical receptive field (CRF) data with predictions from the surround. Here we outline two main hypotheses about gamma-synchronization in visual cortex. First, we hypothesize that the precision of gamma-synchronization reflects the extent to which CRF data can be accurately predicted by the surround. Second, we hypothesize that different cortical columns synchronize to the extent that they accurately predict each other’s CRF visual input. We argue that these two hypotheses can account for a large number of empirical observations made on the stimulus dependencies of gamma-synchronization. Furthermore, we show that they are consistent with the known laminar dependencies of gamma-synchronization and the spatial profile of intercolumnar gamma-synchronization, as well as the dependence of gamma-synchronization on experience and development. Based on our two main hypotheses, we outline two additional hypotheses. First, we hypothesize that the precision of gamma-synchronization shows, in general, a negative dependence on RF size. In support, we review evidence showing that gamma-synchronization decreases in strength along the visual hierarchy, and tends to be more prominent in species with small V1 RFs. Second, we hypothesize that gamma-synchronized network dynamics facilitate the emergence of spiking output that is particularly information-rich and sparse.
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Affiliation(s)
- Martin Vinck
- School of Medicine, Yale University New Haven, CT, USA
| | - Conrado A Bosman
- Cognitive and Systems Neuroscience Group, Swammerdam Institute, Center for Neuroscience, University of AmsterdamAmsterdam, Netherlands; Facultad de Ciencias de la Salud, Universidad Autónoma de ChileSantiago, Chile
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37
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Perrenoud Q, Pennartz CMA, Gentet LJ. Membrane Potential Dynamics of Spontaneous and Visually Evoked Gamma Activity in V1 of Awake Mice. PLoS Biol 2016; 14:e1002383. [PMID: 26890123 PMCID: PMC4758619 DOI: 10.1371/journal.pbio.1002383] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2015] [Accepted: 01/15/2016] [Indexed: 11/19/2022] Open
Abstract
Cortical gamma activity (30–80 Hz) is believed to play important functions in neural computation and arises from the interplay of parvalbumin-expressing interneurons (PV) and pyramidal cells (PYRs). However, the subthreshold dynamics underlying its emergence in the cortex of awake animals remain unclear. Here, we characterized the intracellular dynamics of PVs and PYRs during spontaneous and visually evoked gamma activity in layers 2/3 of V1 of awake mice using targeted patch-clamp recordings and synchronous local field potentials (LFPs). Strong gamma activity patterned in short bouts (one to three cycles), occurred when PVs and PYRs were depolarizing and entrained their membrane potential dynamics regardless of the presence of visual stimulation. PV firing phase locked unconditionally to gamma activity. However, PYRs only phase locked to visually evoked gamma bouts. Taken together, our results indicate that gamma activity corresponds to short pulses of correlated background synaptic activity synchronizing the output of cortical neurons depending on external sensory drive. Gamma activity, an important component of brain dynamics, is driven by synaptic background activity and synchronizes distinct cortical cell types differently depending on visual input. The neocortex is the main substrate of cognitive activity of the mammalian brain. During active wakefulness, it exhibits an oscillatory activity in the gamma range (30–80Hz), which is believed to play an important functional role and is altered in schizophrenic patients. Experimental studies have shown that gamma activity arises from the interaction of excitatory pyramidal neurons, the main neuronal type of the cortex, and local inhibitory neurons expressing the protein parvalbumin (PV). However, how these neuronal types behave during gamma activity remains largely unknown. Here, we recorded the intracellular activity of pyramidal and PV-expressing neurons in the visual cortex of awake mice while acquiring Local Field Potentials (LFPs)—extracellular voltage fluctuations within a small volume of the cortex—to monitor gamma activity. We found that gamma activity arises when PV-expressing neurons synchronize their output in response to a correlated input, reflecting the general activation of the local cortical network. This happens even in the absence of visual input. On the other hand, the output of pyramidal neurons only becomes entrained to gamma activity when the mice are exposed to visual stimulation. Thus, our results suggest that gamma activity synchronizes pyramidal neurons specifically when the cortex is engaged in processing external inputs.
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Affiliation(s)
- Quentin Perrenoud
- Swammerdam Institute for Life Sciences, Center for Neuroscience, Faculty of Science, University of Amsterdam, the Netherlands
- Department of Neurobiology, Yale University School of Medicine, New Haven, Connecticut, United States of America
- * E-mail: (QP); (LJG)
| | - Cyriel M. A. Pennartz
- Swammerdam Institute for Life Sciences, Center for Neuroscience, Faculty of Science, University of Amsterdam, the Netherlands
- Research Priority Program Brain and Cognition, University of Amsterdam, Amsterdam, the Netherlands
| | - Luc J. Gentet
- Swammerdam Institute for Life Sciences, Center for Neuroscience, Faculty of Science, University of Amsterdam, the Netherlands
- Team Waking, Lyon Neuroscience Research Center, INSERM U1028 – CNRS UMR5292 F-69008, Lyon, France
- University Lyon 1, F-69000, Lyon, France
- * E-mail: (QP); (LJG)
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