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Li B, Sun Q, Ding F, Xu Q, Kang N, Xue Y, Ladron-de-Guevara A, Hirase H, Weikop P, Gong S, Smith N, Nedergaard M. Anti-seizure effects of norepinephrine-induced free fatty acid release. Cell Metab 2025; 37:223-238.e5. [PMID: 39486416 DOI: 10.1016/j.cmet.2024.10.011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/08/2024] [Revised: 05/17/2024] [Accepted: 10/10/2024] [Indexed: 11/04/2024]
Abstract
The brain's ability to rapidly transition between sleep, quiet wakefulness, and states of high vigilance is remarkable. Cerebral norepinephrine (NE) plays a key role in promoting wakefulness, but how does the brain avoid neuronal hyperexcitability upon arousal? Here, we show that NE exposure results in the generation of free fatty acids (FFAs) within the plasma membrane from both astrocytes and neurons. In turn, FFAs dampen excitability by differentially modulating the activity of astrocytic and neuronal Na+, K+, ATPase. Direct application of FFA to the occipital cortex in awake, behaving mice dampened visual-evoked potentials (VEPs). Conversely, blocking FFA production via local application of a lipase inhibitor heightened VEP and triggered seizure-like activity. These results suggest that FFA release is a crucial step in NE signaling that safeguards against hyperexcitability. Targeting lipid-signaling pathways may offer a novel therapeutic approach for seizure prevention.
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Affiliation(s)
- Baoman Li
- Division of Glial Disease and Therapeutics, Center for Translational Neuromedicine, Department of Neurosurgery, University of Rochester Medical Center, Rochester, NY 14642, USA; Department of Forensic Analytical Toxicology, School of Forensic Medicine, China Medical University, Shenyang, China.
| | - Qian Sun
- Division of Glial Disease and Therapeutics, Center for Translational Neuromedicine, Department of Neurosurgery, University of Rochester Medical Center, Rochester, NY 14642, USA
| | - Fengfei Ding
- Division of Glial Disease and Therapeutics, Center for Translational Neuromedicine, Department of Neurosurgery, University of Rochester Medical Center, Rochester, NY 14642, USA
| | - Qiwu Xu
- Division of Glial Disease and Therapeutics, Center for Translational Neuromedicine, Department of Neurosurgery, University of Rochester Medical Center, Rochester, NY 14642, USA
| | - Ning Kang
- Division of Glial Disease and Therapeutics, Center for Translational Neuromedicine, Department of Neurosurgery, University of Rochester Medical Center, Rochester, NY 14642, USA
| | - Yang Xue
- Division of Glial Disease and Therapeutics, Center for Translational Neuromedicine, Department of Neurosurgery, University of Rochester Medical Center, Rochester, NY 14642, USA
| | - Antonio Ladron-de-Guevara
- Division of Glial Disease and Therapeutics, Center for Translational Neuromedicine, Department of Neurosurgery, University of Rochester Medical Center, Rochester, NY 14642, USA
| | - Hajime Hirase
- Division of Glial Disease and Therapeutics, Center for Translational Neuromedicine, Department of Neurosurgery, University of Rochester Medical Center, Rochester, NY 14642, USA; Division of Glial Disease and Therapeutics, Center for Translational Neuromedicine, University of Copenhagen, 2200 Copenhagen, Denmark
| | - Pia Weikop
- Division of Glial Disease and Therapeutics, Center for Translational Neuromedicine, University of Copenhagen, 2200 Copenhagen, Denmark
| | - Sheng Gong
- Division of Glial Disease and Therapeutics, Center for Translational Neuromedicine, Department of Neurosurgery, University of Rochester Medical Center, Rochester, NY 14642, USA; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Nathan Smith
- Division of Glial Disease and Therapeutics, Center for Translational Neuromedicine, Department of Neurosurgery, University of Rochester Medical Center, Rochester, NY 14642, USA; Del Monte Institute for Neuroscience, Department of Neuroscience, University of Rochester, School of Medicine and Dentistry, Rochester, NY 14642
| | - Maiken Nedergaard
- Division of Glial Disease and Therapeutics, Center for Translational Neuromedicine, Department of Neurosurgery, University of Rochester Medical Center, Rochester, NY 14642, USA; Division of Glial Disease and Therapeutics, Center for Translational Neuromedicine, University of Copenhagen, 2200 Copenhagen, Denmark; Center for Translational Neuromedicine, Faculty of Medical and Health Sciences, University of Copenhagen, Copenhagen N, Denmark.
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2
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Sun R, Sohrabpour A, Joseph B, Worrell G, He B. Seizure Sources Can Be Imaged from Scalp EEG by Means of Biophysically Constrained Deep Neural Networks. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024; 11:e2405246. [PMID: 39473085 DOI: 10.1002/advs.202405246] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2024] [Revised: 08/10/2024] [Indexed: 11/06/2024]
Abstract
Seizure localization is important for managing drug-resistant focal epilepsy. Here, the capability of a novel deep learning-based source imaging framework (DeepSIF) for imaging seizure activities from electroencephalogram (EEG) recordings in drug-resistant focal epilepsy patients is investigated. The neural mass model of ictal oscillations is adopted to generate synthetic training data with spatio-temporal-spectra features similar to ictal dynamics. The trained DeepSIF model is rigorously validated using computer simulations and in a cohort of 33 drug-resistant focal epilepsy patients with high-density (76-channel) EEG seizure recordings, by comparing DeepSIF estimates with surgical resection outcome and seizure onset zone (SOZ). These findings show that the trained DeepSIF model outperforms other methods in estimating the spatial and temporal information of origins of ictal activities. It achieves a high spatial specificity of 96% and a low spatial dispersion of 3.80 ± 5.74 mm when compared to the resection region. The source imaging results also demonstrate good coverage of SOZ, with an average distance of 10.89 ± 10.14 mm (from the SOZ to the reconstruction). These promising results suggest that DeepSIF has significant potential for advancing noninvasive imaging of the origins of ictal activities in patients with focal epilepsy, aiding management of intractable epilepsy.
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Affiliation(s)
- Rui Sun
- Department of Biomedical Engineering, Carnegie Mellon University, Pittsburgh, PA, 15213, USA
| | - Abbas Sohrabpour
- Department of Biomedical Engineering, Carnegie Mellon University, Pittsburgh, PA, 15213, USA
| | - Boney Joseph
- Department of Neurology, Mayo Clinic, Rochester, MN, 55905, USA
| | - Gregory Worrell
- Department of Neurology, Mayo Clinic, Rochester, MN, 55905, USA
| | - Bin He
- Department of Biomedical Engineering, Carnegie Mellon University, Pittsburgh, PA, 15213, USA
- Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA, 15213, USA
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3
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Zendrikov D, Paraskevov A. The vitals for steady nucleation maps of spontaneous spiking coherence in autonomous two-dimensional neuronal networks. Neural Netw 2024; 180:106589. [PMID: 39217864 DOI: 10.1016/j.neunet.2024.106589] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2024] [Revised: 07/06/2024] [Accepted: 07/28/2024] [Indexed: 09/04/2024]
Abstract
Thin pancake-like neuronal networks cultured on top of a planar microelectrode array have been extensively tried out in neuroengineering, as a substrate for the mobile robot's control unit, i.e., as a cyborg's brain. Most of these attempts failed due to intricate self-organizing dynamics in the neuronal systems. In particular, the networks may exhibit an emergent spatial map of steady nucleation sites ("n-sites") of spontaneous population spikes. Being unpredictable and independent of the surface electrode locations, the n-sites drastically change local ability of the network to generate spikes. Here, using a spiking neuronal network model with generative spatially-embedded connectome, we systematically show in simulations that the number, location, and relative activity of spontaneously formed n-sites ("the vitals") crucially depend on the samplings of three distributions: (1) the network distribution of neuronal excitability, (2) the distribution of connections between neurons of the network, and (3) the distribution of maximal amplitudes of a single synaptic current pulse. Moreover, blocking the dynamics of a small fraction (about 4%) of non-pacemaker neurons having the highest excitability was enough to completely suppress the occurrence of population spikes and their n-sites. This key result is explained theoretically. Remarkably, the n-sites occur taking into account only short-term synaptic plasticity, i.e., without a Hebbian-type plasticity. As the spiking network model used in this study is strictly deterministic, all simulation results can be accurately reproduced. The model, which has already demonstrated a very high richness-to-complexity ratio, can also be directly extended into the three-dimensional case, e.g., for targeting peculiarities of spiking dynamics in cerebral (or brain) organoids. We recommend the model as an excellent illustrative tool for teaching network-level computational neuroscience, complementing a few benchmark models.
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Affiliation(s)
- Dmitrii Zendrikov
- Institute of Neuroinformatics, University of Zurich and ETH Zurich, 8057 Zurich, Switzerland.
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4
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Gollwitzer S, Hopfengärtner R, Rampp S, Welte T, Madžar D, Lang J, Reindl C, Stritzelberger J, Koehn J, Kuramatsu J, Schwab S, Huttner HB, Hamer H. Spectral properties of bursts in therapeutic burst suppression predict successful treatment of refractory status epilepticus. Epilepsy Behav 2024; 161:110093. [PMID: 39489997 DOI: 10.1016/j.yebeh.2024.110093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/29/2024] [Revised: 10/06/2024] [Accepted: 10/08/2024] [Indexed: 11/05/2024]
Abstract
Burst suppression (BS) on EEG induced by intravenous anesthesia (IVAT) is standard therapy for refractory status epilepticus (RSE). If BS has any independent therapeutic effect on RSE is disputed. We aimed to define EEG characteristics of BS predicting termination or recurrence of status after weaning. All RSE patients treated with IVAT while undergoing continuous EEG monitoring on the neurological intensive care unit between 2014 and 2019 were screened for inclusion. A one hour-period of visually preselected BS-EEG was analyzed. Bursts were segmented by a special thresholding technique and underwent power spectral analysis. Out of 48 enrolled patients, 25 (52.1 %) did not develop seizure recurrence (group Non SE) after weaning from IVAT; in 23 patients (47.9 %), SE reestablished (group SE). In group Non SE, bursts contained higher amounts of EEG delta power (91.59 % vs 80.53 %, p < 0.0001), while faster frequencies were more pronounced in bursts in group SE (theta: 11.38 % vs 5.41 %, p = 0.0008; alpha: 4.89 % vs 1.82 %, p < 0.0001; beta: 3.23 % vs 1.21 %, p = 0.0002). Spectral profiles of individual bursts closely resembled preceding seizure patterns in group SE but not in group Non SE. Accordingly, persistence of spectral composition of initial ictal patterns in bursts, suggests ongoing SE, merely interrupted but not altered by BS. Fast oscillations in bursts indicate a high risk of status recurrence after weaning from IVAT. EEG guided individualized sedation regimes might therefore be superior to standardized anesthesia protocols.
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Affiliation(s)
- Stephanie Gollwitzer
- Epilepsy Center, Department of Neurology, University of Erlangen-Nuremberg, Schwabachanlage 6, 91054 Erlangen, Germany.
| | - Rüdiger Hopfengärtner
- Epilepsy Center, Department of Neurology, University of Erlangen-Nuremberg, Schwabachanlage 6, 91054 Erlangen, Germany.
| | - Stefan Rampp
- Epilepsy Center, Department of Neurology, University of Erlangen-Nuremberg, Schwabachanlage 6, 91054 Erlangen, Germany.
| | - Tamara Welte
- Epilepsy Center, Department of Neurology, University of Erlangen-Nuremberg, Schwabachanlage 6, 91054 Erlangen, Germany.
| | - Dominik Madžar
- Epilepsy Center, Department of Neurology, University of Erlangen-Nuremberg, Schwabachanlage 6, 91054 Erlangen, Germany.
| | - Johannes Lang
- Epilepsy Center, Department of Neurology, University of Erlangen-Nuremberg, Schwabachanlage 6, 91054 Erlangen, Germany.
| | - Caroline Reindl
- Epilepsy Center, Department of Neurology, University of Erlangen-Nuremberg, Schwabachanlage 6, 91054 Erlangen, Germany.
| | - Jenny Stritzelberger
- Epilepsy Center, Department of Neurology, University of Erlangen-Nuremberg, Schwabachanlage 6, 91054 Erlangen, Germany.
| | - Julia Koehn
- Epilepsy Center, Department of Neurology, University of Erlangen-Nuremberg, Schwabachanlage 6, 91054 Erlangen, Germany.
| | - Joji Kuramatsu
- Epilepsy Center, Department of Neurology, University of Erlangen-Nuremberg, Schwabachanlage 6, 91054 Erlangen, Germany.
| | - Stefan Schwab
- Epilepsy Center, Department of Neurology, University of Erlangen-Nuremberg, Schwabachanlage 6, 91054 Erlangen, Germany.
| | - Hagen B Huttner
- Department of Neurology, University Hospital Gießen, Klinikstraße 33, 35392 Gießen, Germany.
| | - Hajo Hamer
- Epilepsy Center, Department of Neurology, University of Erlangen-Nuremberg, Schwabachanlage 6, 91054 Erlangen, Germany.
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Connolly MJ, Jiang S, Samuel LC, Gutekunst CA, Gross RE, Devergnas A. Seizure onset and offset pattern determine the entrainment of the cortex and substantia nigra in the nonhuman primate model of focal temporal lobe seizures. PLoS One 2024; 19:e0307906. [PMID: 39197026 PMCID: PMC11356443 DOI: 10.1371/journal.pone.0307906] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2024] [Accepted: 07/13/2024] [Indexed: 08/30/2024] Open
Abstract
Temporal lobe epilepsy (TLE) is the most common form of drug-resistant epilepsy. A major focus of human and animal studies on TLE network has been the limbic circuit. However, there is also evidence suggesting an active role of the basal ganglia in the propagation and control of temporal lobe seizures. Here, we characterize the involvement of the substantia nigra (SN) and somatosensory cortex (SI) during temporal lobe (TL) seizures induced by penicillin injection in the hippocampus (HPC) of two nonhuman primates. The seizure onset and offset patterns were manually classified and spectral power and coherence were calculated. We then compared the 3-second segments recorded in pre-ictal, onset, offset and post-ictal periods based on the seizure onset and offset patterns. Our results demonstrated an involvement of the SN and SI dependent on the seizure onset and offset pattern. We found that low amplitude fast activity (LAF) and high amplitude slow activity (HAS) onset patterns were associated with an increase in activity of the SN while the change in activity was limited to LAF seizures in the SI. However, the increase in HPC/SN coherence was specific to the farther-spreading LAF onset pattern. As for the role of the SN in seizure cessation, we observed that the coherence between the HPC/SN was reduced during burst suppression (BS) compared to other termination phases. Additionally, we found that this coherence returned to normal levels after the seizure ended, with no significant difference in post-ictal periods among the three types of seizure offsets. This study constitutes the first demonstration of TL seizures entraining the SN in the primate brain. Moreover, these findings provide evidence that this entrainment is dependent on the onset and offset pattern and support the hypothesis that the SN might play a role in the maintenance and termination of some specific temporal lobe seizure.
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Affiliation(s)
- Mark J. Connolly
- Emory National Primate Research Center, Emory University, Atlanta, GA, United States of America
- Wallace H. Coulter Department of Biomedical Engineering, Emory University and Georgia Institute of Technology, Atlanta, GA, United States of America
| | - Sujin Jiang
- Emory College of Arts & Sciences, Emory University, Atlanta, GA, United States of America
| | - Lim C. Samuel
- Emory College of Arts & Sciences, Emory University, Atlanta, GA, United States of America
| | - Claire-Anne Gutekunst
- Department of Neurosurgery, Emory University School of Medicine, Atlanta, GA, United States of America
| | - Robert E. Gross
- Wallace H. Coulter Department of Biomedical Engineering, Emory University and Georgia Institute of Technology, Atlanta, GA, United States of America
- Department of Neurosurgery, Emory University School of Medicine, Atlanta, GA, United States of America
- Department of Neurosurgery, Robert Wood Johnson Medical School, Rutgers University, New Brunswick, NJ, United States of America
| | - Annaelle Devergnas
- Emory National Primate Research Center, Emory University, Atlanta, GA, United States of America
- Department of Neurology, Emory University School of Medicine, Atlanta, GA, United States of America
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6
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Connolly MJ, Jiang S, Samuel L, Gutekunst CA, Gross RE, Devergnas A. Seizure onset and offset pattern determine the entrainment of the cortex and substantia nigra in the nonhuman primate model of focal temporal lobe seizures. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.06.04.543608. [PMID: 37333298 PMCID: PMC10274660 DOI: 10.1101/2023.06.04.543608] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/20/2023]
Abstract
Temporal lobe (TL) epilepsy is the most common form of drug-resistant epilepsy. A major focus of human and animal studies on TLE network has been the limbic circuit and the structures composing the temporal lobe. However, there is also evidence suggesting an active role of the basal ganglia in the propagation and control of temporal lobe seizures. Evidence suggests that the network involved in temporal lobe seizure may depend on their onset and offset pattern but studies on the relationship between the patterns and extralimbic activity are limited. Here, we characterize the involvement of the substantia nigra (SN) and somatosensory cortex (SI) during temporal lobe seizures induced in two nonhuman primates (NHP). The seizure onset and offset patterns were manually classified and spectral power and coherence were calculated. We then analyzed the three first and last seconds of the seizure as well as 3-second segments of recorded in pre-ictal and post-ictal periods and compared the changes based on the seizure onset and offset patterns. Our results demonstrated an involvement of the SN and SI dependent on the seizure onset and offset pattern. We found that seizures with both low amplitude fast activity (LAF) and high amplitude slow activity (HAS) onset patterns were associated with an increase in activity of the SN while the change in activity was limited to LAF seizures in the SI. However, the increase of HPC/SI coherence was similar for both type of onset, while the increase in HPC/SN coherence was specific to the farther-spreading LAF onset pattern. As for the role of the SN in seizure cessation, we observed that the coherence between the HPC/SN was reduced during burst suppression (BS) compared to other termination phases. Additionally, we found that this coherence returned to normal levels after the seizure ended, with no significant difference in post-ictal periods among the three types of seizure offsets. This result suggests that the SN might be involved differently in the termination of the BS seizure pattern. This study constitutes the first demonstration of temporal lobe seizures entraining the SN in the primate brain. Moreover, these findings provide evidence that this entrainment is dependent on the seizure onset pattern and support the hypothesis that the SN might play a role in the maintenance and termination of some specific temporal lobe seizure.
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Affiliation(s)
- Mark J. Connolly
- Emory National Primate Research Center, Emory University, Atlanta, GA 30329, USA
- Wallace H. Coulter Department of Biomedical Engineering, Emory University and Georgia Institute of Technology, Atlanta, GA, 30332, USA
| | - Sujin Jiang
- Emory College of Arts & Sciences, Emory University, Atlanta, GA, 30322, USA
| | - Lim Samuel
- Emory College of Arts & Sciences, Emory University, Atlanta, GA, 30322, USA
| | - Claire-Anne Gutekunst
- Department of Neurosurgery, Emory University School of Medicine, Atlanta, GA, 30322, USA
| | - Robert E. Gross
- Wallace H. Coulter Department of Biomedical Engineering, Emory University and Georgia Institute of Technology, Atlanta, GA, 30332, USA
- Department of Neurosurgery, Emory University School of Medicine, Atlanta, GA, 30322, USA
- Department of Neurology, Emory University School of Medicine, Atlanta, GA, 30322, USA
| | - Annaelle Devergnas
- Emory National Primate Research Center, Emory University, Atlanta, GA 30329, USA
- Department of Neurology, Emory University School of Medicine, Atlanta, GA, 30322, USA
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Sun R, Sohrabpour A, Joseph B, Worrell G, He B. Spatiotemporal Rhythmic Seizure Sources Can be Imaged by means of Biophysically Constrained Deep Neural Networks. MEDRXIV : THE PREPRINT SERVER FOR HEALTH SCIENCES 2023:2023.11.30.23299218. [PMID: 38076950 PMCID: PMC10705619 DOI: 10.1101/2023.11.30.23299218] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/06/2024]
Abstract
Noninvasive dynamic brain imaging of neural oscillations provides valuable insights into both physiological and pathological brain states. Yet, challenges remain due to the ill-posed nature of the problem and high complexity of the solution space, which can be alleviated by advanced computational models. Here, we investigated the capability of a novel deep learning-based source imaging framework (DeepSIF) for imaging ictal activities from high-density electroencephalogram (EEG) recordings in drug-resistant focal epilepsy patients. The neural mass model of ictal oscillations was adopted to generate synthetic training data with spatio-temporal-spectra features similar to ictal dynamics. We rigorously validated the trained DeepSIF model using computer simulations and in a cohort of 33 drug-resistant focal epilepsy patients. The DeepSIF ictal source imaging was compared with interictal source imaging and three conventional imaging methods as benchmark comparisons. Our findings show that the trained DeepSIF model outperforms other methods in estimating the spatial and temporal information of ictal sources. It achieves a high spatial specificity of 96% and a low spatial dispersion of 3.80 ± 5.74 mm when compared to the resection region. The noninvasive source imaging results also demonstrate good coverage of seizure-onset-zone (SOZ), with an average distance of 10.89 ± 10.14 mm (from the SOZ to the reconstruction). These promising results suggest that DeepSIF has significant potential for advancing noninvasive imaging of ictal activities in patients with focal epilepsy. By providing valuable insights into the spatiotemporal dynamics of seizure activity, DeepSIF promises to help guide clinical decisions and improve treatment outcomes for epilepsy patients.
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Mackay M, Huo S, Kaiser M. Spatial organisation of the mesoscale connectome: A feature influencing synchrony and metastability of network dynamics. PLoS Comput Biol 2023; 19:e1011349. [PMID: 37552650 PMCID: PMC10437862 DOI: 10.1371/journal.pcbi.1011349] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2022] [Revised: 08/18/2023] [Accepted: 07/12/2023] [Indexed: 08/10/2023] Open
Abstract
Significant research has investigated synchronisation in brain networks, but the bulk of this work has explored the contribution of brain networks at the macroscale. Here we explore the effects of changing network topology on functional dynamics in spatially constrained random networks representing mesoscale neocortex. We use the Kuramoto model to simulate network dynamics and explore synchronisation and critical dynamics of the system as a function of topology in randomly generated networks with a distance-related wiring probability and no preferential attachment term. We show networks which predominantly make short-distance connections smooth out the critical coupling point and show much greater metastability, resulting in a wider range of coupling strengths demonstrating critical dynamics and metastability. We show the emergence of cluster synchronisation in these geometrically-constrained networks with functional organisation occurring along structural connections that minimise the participation coefficient of the cluster. We show that these cohorts of internally synchronised nodes also behave en masse as weakly coupled nodes and show intra-cluster desynchronisation and resynchronisation events related to inter-cluster interaction. While cluster synchronisation appears crucial to healthy brain function, it may also be pathological if it leads to unbreakable local synchronisation which may happen at extreme topologies, with implications for epilepsy research, wider brain function and other domains such as social networks.
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Affiliation(s)
- Michael Mackay
- Newcastle University, School of Computing, Newcastle upon Tyne, United Kingdom
| | - Siyu Huo
- East China Normal University, School of Physics and Electronic Science, Shanghai, China
- University of Nottingham, NIHR Nottingham Biomedical Research Centre, School of Medicine, Nottingham, United Kingdom
| | - Marcus Kaiser
- University of Nottingham, NIHR Nottingham Biomedical Research Centre, School of Medicine, Nottingham, United Kingdom
- University of Nottingham, Sir Peter Mansfield Imaging Centre, School of Medicine, Nottingham, United Kingdom
- Shanghai Jiao Tong University, School of Medicine, Shanghai, China
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Wang Y, Schroeder GM, Horsley JJ, Panagiotopoulou M, Chowdhury FA, Diehl B, Duncan JS, McEvoy AW, Miserocchi A, de Tisi J, Taylor PN. Temporal stability of intracranial electroencephalographic abnormality maps for localizing epileptogenic tissue. Epilepsia 2023; 64:2070-2080. [PMID: 37226553 PMCID: PMC10962550 DOI: 10.1111/epi.17663] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2023] [Revised: 05/22/2023] [Accepted: 05/23/2023] [Indexed: 05/26/2023]
Abstract
OBJECTIVE Identifying abnormalities on interictal intracranial electroencephalogram (iEEG), by comparing patient data to a normative map, has shown promise for the localization of epileptogenic tissue and prediction of outcome. The approach typically uses short interictal segments of approximately 1 min. However, the temporal stability of findings has not been established. METHODS Here, we generated a normative map of iEEG in nonpathological brain tissue from 249 patients. We computed regional band power abnormalities in a separate cohort of 39 patients for the duration of their monitoring period (.92-8.62 days of iEEG data, mean = 4.58 days per patient, >4800 hours recording). To assess the localizing value of band power abnormality, we computedD RS -a measure of how different the surgically resected and spared tissue was in terms of band power abnormalities-over time. RESULTS In each patient, theD RS value was relatively consistent over time. The medianD RS of the entire recording period separated seizure-free (International League Against Epilepsy [ILAE] = 1) and not-seizure-free (ILAE> 1) patients well (area under the curve [AUC] = .69). This effect was similar interictally (AUC = .69) and peri-ictally (AUC = .71). SIGNIFICANCE Our results suggest that band power abnormality D_RS, as a predictor of outcomes from epilepsy surgery, is a relatively robust metric over time. These findings add further support for abnormality mapping of neurophysiology data during presurgical evaluation.
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Affiliation(s)
- Yujiang Wang
- CNNP Lab, Interdisciplinary Computing and Complex BioSystems Group, School of ComputingNewcastle UniversityNewcastle Upon TyneUK
- Faculty of Medical SciencesNewcastle UniversityNewcastle Upon TyneUK
- UCL Queen Square Institute of NeurologyQueen SquareLondonUK
| | - Gabrielle M. Schroeder
- CNNP Lab, Interdisciplinary Computing and Complex BioSystems Group, School of ComputingNewcastle UniversityNewcastle Upon TyneUK
| | - Jonathan J. Horsley
- CNNP Lab, Interdisciplinary Computing and Complex BioSystems Group, School of ComputingNewcastle UniversityNewcastle Upon TyneUK
| | - Mariella Panagiotopoulou
- CNNP Lab, Interdisciplinary Computing and Complex BioSystems Group, School of ComputingNewcastle UniversityNewcastle Upon TyneUK
| | | | - Beate Diehl
- UCL Queen Square Institute of NeurologyQueen SquareLondonUK
| | - John S. Duncan
- UCL Queen Square Institute of NeurologyQueen SquareLondonUK
| | | | | | - Jane de Tisi
- UCL Queen Square Institute of NeurologyQueen SquareLondonUK
| | - Peter N. Taylor
- CNNP Lab, Interdisciplinary Computing and Complex BioSystems Group, School of ComputingNewcastle UniversityNewcastle Upon TyneUK
- Faculty of Medical SciencesNewcastle UniversityNewcastle Upon TyneUK
- UCL Queen Square Institute of NeurologyQueen SquareLondonUK
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10
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Wang Y, Shi X, Si B, Cheng B, Chen J. Synchronization and oscillation behaviors of excitatory and inhibitory populations with spike-timing-dependent plasticity. Cogn Neurodyn 2023; 17:715-727. [PMID: 37265649 PMCID: PMC10229527 DOI: 10.1007/s11571-022-09840-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2022] [Revised: 06/06/2022] [Accepted: 06/24/2022] [Indexed: 11/26/2022] Open
Abstract
The effect of synaptic plasticity on the synchronization mechanism of the cerebral cortex has been a hot research topic over the past two decades. There are a great deal of literatures on excitatory pyramidal neurons, but the mechanism of interaction between the inhibitory interneurons is still under exploration. In this study, we consider a complex network consisting of excitatory (E) pyramidal neurons and inhibitory (I) interneurons interacting with chemical synapses through spike-timing-dependent plasticity (STDP). To study the effects of eSTDP and iSTDP on synchronization and oscillation behaviors emerged in an excitatory-inhibitory balanced network, we analyzed three different cases, a small-world network of purely excitatory neurons with eSTDP, a small-world network of purely inhibitory neurons with iSTDP and a small-world network with excitatory-inhibitory balanced neurons. By varying the number of inhibitory interneurons, and that of connected edges in a small-world network, and the coupling strength, these networks exhibit different synchronization and oscillation behaviors. We found that the eSTDP facilitates synchronization effectively, while iSTDP has no significant impact on it. In addition, eSTDP and iSTDP restrict the balance of the excitatory-inhibitory balanced neuronal network together and play a fundamental role in maintaining network stability and synchronization. They also can be used to guide the treatment and further research of neurodegenerative diseases.
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Affiliation(s)
- Yuan Wang
- Brain and Autonomous Intelligent Robots Lab, School of Systems Science, Beijing Normal University, Beijing, People’s Republic of China
| | - Xia Shi
- School of Science, Beijing University of Posts and Telecommunications, Beijing, People’s Republic of China
| | - Bailu Si
- Brain and Autonomous Intelligent Robots Lab, School of Systems Science, Beijing Normal University, Beijing, People’s Republic of China
| | - Bo Cheng
- State Key Laboratory of Networking and Switching Technology, Beijing University of Posts and Telecommunications, Beijing, People’s Republic of China
| | - Junliang Chen
- State Key Laboratory of Networking and Switching Technology, Beijing University of Posts and Telecommunications, Beijing, People’s Republic of China
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11
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Al-Ameri LT, Hameed EK, Maroof BS, Al-Momen H. Fecal incontinence as the sole presentation of focal epilepsy; a case report. Oxf Med Case Reports 2023; 2023:omad064. [PMID: 37377719 PMCID: PMC10292643 DOI: 10.1093/omcr/omad064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2023] [Revised: 05/21/2023] [Accepted: 05/23/2023] [Indexed: 06/29/2023] Open
Abstract
Focal epilepsy is a surge in brain activity arising from a localised area of the cerebral cortex; it can be sub-classified in different categories including motor, sensory, autonomic and cognitive subtypes. A clinical case report of a 11-year-old girl was diagnosed with frequent fecal incontinence four or more times daily for more than two months. An electroencephalogram (EEG) study suggested a prominent interictal spike and sharp wave discharge on the left hemisphere, mainly at the frontotemporal region without loss of consciousness or even speech disruption. This could be due to the normal EEG study of the dominant hemisphere. A magnetic resonance imaging study was done to exclude space-occupying lesions or focal lesions of the left hemisphere of the brain. An impression was made with abnormal EEG showing focal epileptiform activity as a final diagnosis. The patient was treated with Leviteracetam anti-epileptic drug 250 mg twice daily with significant clinical improvement at a 3-month follow-up.
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Affiliation(s)
- Laith T Al-Ameri
- Correspondence address. Al-Kindy College of Medicine, University of Baghdad, Baghdad, Iraq. Tel: +9647705343467; E-mail:
| | - Ekhlas K Hameed
- Al-Kindy College of Medicine, University of Baghdad, Baghdad, Iraq
| | - Bilal S Maroof
- Al-Kindy College of Medicine, University of Baghdad, Baghdad, Iraq
| | - Hayder Al-Momen
- Al-Kindy College of Medicine, University of Baghdad, Baghdad, Iraq
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12
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Alorfi NM, Ashour AM, Bafhaid HS, Alshehri FS. Evaluation of Pharmacology and Pathophysiology Knowledge of Epilepsy among Senior Pharmacy Students: A Single Center Experience. MEDICINA (KAUNAS, LITHUANIA) 2023; 59:medicina59050848. [PMID: 37241080 DOI: 10.3390/medicina59050848] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2023] [Revised: 04/19/2023] [Accepted: 04/24/2023] [Indexed: 05/28/2023]
Abstract
Background and Objectives: Epilepsy is a chronic disease that causes substantial morbidity and mortality. Pharmacists represent an integral role in managing patients with epilepsy. The aim of this study was to evaluate the level of knowledge about the pharmacology and pathophysiology of epilepsy among senior pharmacy students. Materials and Methods: Cross-sectional study using a designed questionnaire to measure the pharmacological and physiological knowledge of senior pharmacy students regarding epilepsy who are studying at Umm Al-Qura University, Makkah, Saudi Arabia, from August to October 2022. Results: A total of 211 senior clinical pharmacy students responded to the questionnaire. The majority of the respondents were 4th year pharmacy students. The numbers of female and male participants were equal (106 and 105 students, respectively). The participants represented an acceptable level of knowledge about the pathophysiology aspects of epilepsy, with a mean total score of 6.22 ± 1.9 out of a maximum score of 10. The respondents reported that epilepsy could be due to genetic predisposition combined with environmental conditions (80.1%) or brain stroke (17.1%). Regarding the respondent knowledge about the pharmacology of epilepsy, the total score was 4.6 ± 2.1 (maximum attainable score: 9). Conclusions: The majority of pharmacy students had knowledge about the pathophysiology concept of the disease; however, low knowledge was shown by the respondents regarding the pharmacology of epilepsy. Thus, there is a need to identify better strategies to improve students' education.
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Affiliation(s)
- Nasser M Alorfi
- Department of Pharmacology and Toxicology, College of Pharmacy, Umm Al-Qura University, Makkah 24382, Saudi Arabia
| | - Ahmed M Ashour
- Department of Pharmacology and Toxicology, College of Pharmacy, Umm Al-Qura University, Makkah 24382, Saudi Arabia
| | - Hanouf S Bafhaid
- Department of Pharmacology and Toxicology, College of Pharmacy, Umm Al-Qura University, Makkah 24382, Saudi Arabia
| | - Fahad S Alshehri
- Department of Pharmacology and Toxicology, College of Pharmacy, Umm Al-Qura University, Makkah 24382, Saudi Arabia
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13
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Depannemaecker D, Ezzati A, Wang H, Jirsa V, Bernard C. From phenomenological to biophysical models of seizures. Neurobiol Dis 2023; 182:106131. [PMID: 37086755 DOI: 10.1016/j.nbd.2023.106131] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2023] [Revised: 04/12/2023] [Accepted: 04/14/2023] [Indexed: 04/24/2023] Open
Abstract
Epilepsy is a complex disease that requires various approaches for its study. In this short review, we discuss the contribution of theoretical and computational models. The review presents theoretical frameworks that underlie the understanding of certain seizure properties and their classification based on their dynamical properties at the onset and offset of seizures. Dynamical system tools are valuable resources in the study of seizures. By analyzing the complex, dynamic behavior of seizures, these tools can provide insights into seizure mechanisms and offer a framework for their classification. Additionally, computational models have high potential for clinical applications, as they can be used to develop more accurate diagnostic and personalized medicine tools. We discuss various modeling approaches that span different scales and levels, while also questioning the neurocentric view, and emphasize the importance of considering glial cells. Finally, we explore the epistemic value provided by this type of approach.
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Affiliation(s)
- Damien Depannemaecker
- Institut de Neurosciences des Syst' emes, Aix-Marseille University, INSERM, Marseille, France.
| | - Aitakin Ezzati
- Institut de Neurosciences des Syst' emes, Aix-Marseille University, INSERM, Marseille, France
| | - Huifang Wang
- Institut de Neurosciences des Syst' emes, Aix-Marseille University, INSERM, Marseille, France
| | - Viktor Jirsa
- Institut de Neurosciences des Syst' emes, Aix-Marseille University, INSERM, Marseille, France
| | - Christophe Bernard
- Institut de Neurosciences des Syst' emes, Aix-Marseille University, INSERM, Marseille, France.
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14
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A seizure detection method based on hypergraph features and machine learning. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2022.103769] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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15
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Yang Y, Truong ND, Eshraghian JK, Nikpour A, Kavehei O. Weak self-supervised learning for seizure forecasting: a feasibility study. ROYAL SOCIETY OPEN SCIENCE 2022; 9:220374. [PMID: 35950196 PMCID: PMC9346358 DOI: 10.1098/rsos.220374] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2022] [Accepted: 07/12/2022] [Indexed: 05/27/2023]
Abstract
This paper proposes an artificial intelligence system that continuously improves over time at event prediction using initially unlabelled data by using self-supervised learning. Time-series data are inherently autocorrelated. By using a detection model to generate weak labels on the fly, which are concurrently used as targets to train a prediction model on a time-shifted input data stream, this autocorrelation can effectively be harnessed to reduce the burden of manual labelling. This is critical in medical patient monitoring, as it enables the development of personalized forecasting models without demanding the annotation of long sequences of physiological signal recordings. We perform a feasibility study on seizure prediction, which is identified as an ideal test case, as pre-ictal brainwaves are patient-specific, and tailoring models to individual patients is known to improve forecasting performance significantly. Our self-supervised approach is used to train individualized forecasting models for 10 patients, showing an average relative improvement in sensitivity by 14.30% and a reduction in false alarms by 19.61% in early seizure forecasting. This proof-of-concept on the feasibility of using a continuous stream of time-series neurophysiological data paves the way towards a low-power neuromorphic neuromodulation system.
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Affiliation(s)
- Yikai Yang
- School of Biomedical Engineering, and the Australian Research Council Training Centre for Innovative BioEngineering, Faculty of EngineeringThe University of Sydney Nano Institute, Sydney, New South Wales 2006, Australia
| | - Nhan Duy Truong
- School of Biomedical Engineering, and the Australian Research Council Training Centre for Innovative BioEngineering, Faculty of EngineeringThe University of Sydney Nano Institute, Sydney, New South Wales 2006, Australia
- The University of Sydney Nano Institute, Sydney, New South Wales 2006, Australia
| | - Jason K. Eshraghian
- Department of Electrical and Computer Engineering, University of California Santa Cruz, Santa Cruz, CA 95064, USA
| | - Armin Nikpour
- Faculty of Medicine and Health, Central Clinical School, The University of Sydney, Sydney, New South Wales 2006, Australia
- Comprehensive Epilepsy Service and Department of Neurology, Royal Prince Alfred Hospital, Camperdown, New South Wales 2050, Australia
| | - Omid Kavehei
- School of Biomedical Engineering, and the Australian Research Council Training Centre for Innovative BioEngineering, Faculty of EngineeringThe University of Sydney Nano Institute, Sydney, New South Wales 2006, Australia
- The University of Sydney Nano Institute, Sydney, New South Wales 2006, Australia
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16
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Schroeder GM, Chowdhury FA, Cook MJ, Diehl B, Duncan JS, Karoly PJ, Taylor PN, Wang Y. Multiple mechanisms shape the relationship between pathway and duration of focal seizures. Brain Commun 2022; 4:fcac173. [PMID: 35855481 PMCID: PMC9280328 DOI: 10.1093/braincomms/fcac173] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2021] [Revised: 03/18/2022] [Accepted: 06/30/2022] [Indexed: 12/22/2022] Open
Abstract
A seizure's electrographic dynamics are characterized by its spatiotemporal evolution, also termed dynamical 'pathway', and the time it takes to complete that pathway, which results in the seizure's duration. Both seizure pathways and durations have been shown to vary within the same patient. However, it is unclear whether seizures following the same pathway will have the same duration or if these features can vary independently. We compared within-subject variability in these seizure features using (i) epilepsy monitoring unit intracranial EEG (iEEG) recordings of 31 patients (mean: 6.7 days, 16.5 seizures/subject), (ii) NeuroVista chronic iEEG recordings of 10 patients (mean: 521.2 days, 252.6 seizures/subject) and (iii) chronic iEEG recordings of three dogs with focal-onset seizures (mean: 324.4 days, 62.3 seizures/subject). While the strength of the relationship between seizure pathways and durations was highly subject-specific, in most subjects, changes in seizure pathways were only weakly to moderately associated with differences in seizure durations. The relationship between seizure pathways and durations was strengthened by seizures that were 'truncated' versions, both in pathway and duration, of other seizures. However, the relationship was weakened by seizures that had a common pathway, but different durations ('elasticity'), or had similar durations, but followed different pathways ('semblance'). Even in subjects with distinct populations of short and long seizures, seizure durations were not a reliable indicator of different seizure pathways. These findings suggest that seizure pathways and durations are modulated by multiple different mechanisms. Uncovering such mechanisms may reveal novel therapeutic targets for reducing seizure duration and severity.
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Affiliation(s)
- Gabrielle M Schroeder
- CNNP Lab, Interdisciplinary Computing and Complex BioSystems Group, School of Computing, Newcastle University, Newcastle upon Tyne, United Kingdom
| | - Fahmida A Chowdhury
- UCL Queen Square Institute of Neurology, Queen Square, London, United Kingdom
| | - Mark J Cook
- Graeme Clark Institute and St Vincent’s Hospital, University of Melbourne, Melbourne, VIC, Australia
- Seer Medical Pty Ltd, Melbourne, VIC, Australia
| | - Beate Diehl
- UCL Queen Square Institute of Neurology, Queen Square, London, United Kingdom
| | - John S Duncan
- UCL Queen Square Institute of Neurology, Queen Square, London, United Kingdom
| | - Philippa J Karoly
- Graeme Clark Institute and St Vincent’s Hospital, University of Melbourne, Melbourne, VIC, Australia
- Department of Biomedical Engineering, University of Melbourne, Melbourne, VIC, Australia
- Seer Medical Pty Ltd, Melbourne, VIC, Australia
| | - Peter N Taylor
- CNNP Lab, Interdisciplinary Computing and Complex BioSystems Group, School of Computing, Newcastle University, Newcastle upon Tyne, United Kingdom
- Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom
- UCL Queen Square Institute of Neurology, Queen Square, London, United Kingdom
| | - Yujiang Wang
- CNNP Lab, Interdisciplinary Computing and Complex BioSystems Group, School of Computing, Newcastle University, Newcastle upon Tyne, United Kingdom
- Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom
- UCL Queen Square Institute of Neurology, Queen Square, London, United Kingdom
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17
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Lau LA, Staley KJ, Lillis KP. In vitro ictogenesis is stochastic at the single neuron level. Brain 2022; 145:531-541. [PMID: 34431994 PMCID: PMC9014754 DOI: 10.1093/brain/awab312] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2021] [Revised: 07/13/2021] [Accepted: 07/30/2021] [Indexed: 11/14/2022] Open
Abstract
Seizure initiation is the least understood and most disabling element of epilepsy. Studies of ictogenesis require high speed recordings at cellular resolution in the area of seizure onset. However, in vivo seizure onset areas cannot be determined at the level of resolution necessary to enable such studies. To circumvent these challenges, we used novel GCaMP7-based calcium imaging in the organotypic hippocampal slice culture model of post-traumatic epilepsy in mice. Organotypic hippocampal slice cultures generate spontaneous, recurrent seizures in a preparation in which it is feasible to image the activity of the entire network (with no unseen inputs existing). Chronic calcium imaging of the entire hippocampal network, with paired electrophysiology, revealed three patterns of seizure onset: (i) low amplitude fast activity; (ii) sentinel spike; and (iii) spike burst and low amplitude fast activity onset. These patterns recapitulate common features of human seizure onset, including low voltage fast activity and spike discharges. Weeks-long imaging of seizure activity showed a characteristic evolution in onset type and a refinement of the seizure onset zone. Longitudinal tracking of individual neurons revealed that seizure onset is stochastic at the single neuron level, suggesting that seizure initiation activates neurons in non-stereotyped sequences seizure to seizure. This study demonstrates for the first time that transitions to seizure are not initiated by a small number of neuronal 'bad actors' (such as overly connected hub cells), but rather by network changes which enable the onset of pathology among large populations of neurons.
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Affiliation(s)
- Lauren A Lau
- Department of Neurology, Massachusetts General Hospital, Boston, MA 02114, USA.,Harvard Medical School, Boston, MA 02115, USA
| | - Kevin J Staley
- Department of Neurology, Massachusetts General Hospital, Boston, MA 02114, USA.,Harvard Medical School, Boston, MA 02115, USA
| | - Kyle P Lillis
- Department of Neurology, Massachusetts General Hospital, Boston, MA 02114, USA.,Harvard Medical School, Boston, MA 02115, USA
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18
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Cao M, Vogrin SJ, Peterson ADH, Woods W, Cook MJ, Plummer C. Dynamical Network Models From EEG and MEG for Epilepsy Surgery—A Quantitative Approach. Front Neurol 2022; 13:837893. [PMID: 35422755 PMCID: PMC9001937 DOI: 10.3389/fneur.2022.837893] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2021] [Accepted: 03/01/2022] [Indexed: 11/16/2022] Open
Abstract
There is an urgent need for more informative quantitative techniques that non-invasively and objectively assess strategies for epilepsy surgery. Invasive intracranial electroencephalography (iEEG) remains the clinical gold standard to investigate the nature of the epileptogenic zone (EZ) before surgical resection. However, there are major limitations of iEEG, such as the limited spatial sampling and the degree of subjectivity inherent in the analysis and clinical interpretation of iEEG data. Recent advances in network analysis and dynamical network modeling provide a novel aspect toward a more objective assessment of the EZ. The advantage of such approaches is that they are data-driven and require less or no human input. Multiple studies have demonstrated success using these approaches when applied to iEEG data in characterizing the EZ and predicting surgical outcomes. However, the limitations of iEEG recordings equally apply to these studies—limited spatial sampling and the implicit assumption that iEEG electrodes, whether strip, grid, depth or stereo EEG (sEEG) arrays, are placed in the correct location. Therefore, it is of interest to clinicians and scientists to see whether the same analysis and modeling techniques can be applied to whole-brain, non-invasive neuroimaging data (from MRI-based techniques) and neurophysiological data (from MEG and scalp EEG recordings), thus removing the limitation of spatial sampling, while safely and objectively characterizing the EZ. This review aims to summarize current state of the art non-invasive methods that inform epilepsy surgery using network analysis and dynamical network models. We also present perspectives on future directions and clinical applications of these promising approaches.
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Affiliation(s)
- Miao Cao
- Center for MRI Research, Peking University, Beijing, China
- Department of Medicine, The University of Melbourne, Melbourne, VIC, Australia
- Centre for Clinical Neurosciences and Neurological Research, St Vincent's Hospital Melbourne, Melbourne, VIC, Australia
| | - Simon J. Vogrin
- Department of Medicine, The University of Melbourne, Melbourne, VIC, Australia
- Centre for Clinical Neurosciences and Neurological Research, St Vincent's Hospital Melbourne, Melbourne, VIC, Australia
- School of Health Sciences, Swinburne University of Technology, Melbourne, VIC, Australia
| | - Andre D. H. Peterson
- Department of Medicine, The University of Melbourne, Melbourne, VIC, Australia
- Centre for Clinical Neurosciences and Neurological Research, St Vincent's Hospital Melbourne, Melbourne, VIC, Australia
| | - William Woods
- School of Health Sciences, Swinburne University of Technology, Melbourne, VIC, Australia
| | - Mark J. Cook
- Department of Medicine, The University of Melbourne, Melbourne, VIC, Australia
- Centre for Clinical Neurosciences and Neurological Research, St Vincent's Hospital Melbourne, Melbourne, VIC, Australia
| | - Chris Plummer
- Department of Medicine, The University of Melbourne, Melbourne, VIC, Australia
- Centre for Clinical Neurosciences and Neurological Research, St Vincent's Hospital Melbourne, Melbourne, VIC, Australia
- School of Health Sciences, Swinburne University of Technology, Melbourne, VIC, Australia
- *Correspondence: Chris Plummer
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19
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A unified physiological framework of transitions between seizures, sustained ictal activity and depolarization block at the single neuron level. J Comput Neurosci 2022; 50:33-49. [PMID: 35031915 PMCID: PMC8818009 DOI: 10.1007/s10827-022-00811-1] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2021] [Revised: 11/10/2021] [Accepted: 01/03/2022] [Indexed: 10/29/2022]
Abstract
The majority of seizures recorded in humans and experimental animal models can be described by a generic phenomenological mathematical model, the Epileptor. In this model, seizure-like events (SLEs) are driven by a slow variable and occur via saddle node (SN) and homoclinic bifurcations at seizure onset and offset, respectively. Here we investigated SLEs at the single cell level using a biophysically relevant neuron model including a slow/fast system of four equations. The two equations for the slow subsystem describe ion concentration variations and the two equations of the fast subsystem delineate the electrophysiological activities of the neuron. Using extracellular K+ as a slow variable, we report that SLEs with SN/homoclinic bifurcations can readily occur at the single cell level when extracellular K+ reaches a critical value. In patients and experimental models, seizures can also evolve into sustained ictal activity (SIA) and depolarization block (DB), activities which are also parts of the dynamic repertoire of the Epileptor. Increasing extracellular concentration of K+ in the model to values found during experimental status epilepticus and DB, we show that SIA and DB can also occur at the single cell level. Thus, seizures, SIA, and DB, which have been first identified as network events, can exist in a unified framework of a biophysical model at the single neuron level and exhibit similar dynamics as observed in the Epileptor.Author Summary: Epilepsy is a neurological disorder characterized by the occurrence of seizures. Seizures have been characterized in patients in experimental models at both macroscopic and microscopic scales using electrophysiological recordings. Experimental works allowed the establishment of a detailed taxonomy of seizures, which can be described by mathematical models. We can distinguish two main types of models. Phenomenological (generic) models have few parameters and variables and permit detailed dynamical studies often capturing a majority of activities observed in experimental conditions. But they also have abstract parameters, making biological interpretation difficult. Biophysical models, on the other hand, use a large number of variables and parameters due to the complexity of the biological systems they represent. Because of the multiplicity of solutions, it is difficult to extract general dynamical rules. In the present work, we integrate both approaches and reduce a detailed biophysical model to sufficiently low-dimensional equations, and thus maintaining the advantages of a generic model. We propose, at the single cell level, a unified framework of different pathological activities that are seizures, depolarization block, and sustained ictal activity.
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20
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Irannejad A, Chaitanya G, Toth E, Pizarro D, Pati S. Direct Cortical Stimulation to Probe the Ictogenicity of the Epileptogenic Nodes in Temporal Lobe Epilepsy. Front Neurol 2022; 12:761412. [PMID: 35095721 PMCID: PMC8793936 DOI: 10.3389/fneur.2021.761412] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2021] [Accepted: 12/09/2021] [Indexed: 11/13/2022] Open
Abstract
Accurate mapping of the seizure onset zone (SOZ) is critical to the success of epilepsy surgery outcomes. Epileptogenicity index (EI) is a statistical method that delineates hyperexcitable brain regions involved in the generation and early propagation of seizures. However, EI can overestimate the SOZ for particular electrographic seizure onset patterns. Therefore, using direct cortical stimulation (DCS) as a probing tool to identify seizure generators, we systematically evaluated the causality of the high EI nodes (>0.3) in replicating the patient's habitual seizures. Specifically, we assessed the diagnostic yield of high EI nodes, i.e., the proportion of high EI nodes that evoked habitual seizures. A retrospective single-center study that included post-stereo encephalography (SEEG) confirmed TLE patients (n = 37) that had all high EI nodes stimulated, intending to induce a seizure. We evaluated the nodal responses (true and false responder rate) to stimulation and correlated with electrographic seizure onset patterns (hypersynchronous-HYP and low amplitude fast activity patterns-LAFA) and clinically defined SOZ. The ictogenicity (i.e., the propensity to induce the patient's habitual seizure) of a high EI node was only 44.5%. The LAFA onset pattern had a significantly higher response rate to DCS (i.e., higher evoked seizures). The concordance of an evoked habitual seizure with a clinically defined SOZ with good outcomes was over 50% (p = 0.0025). These results support targeted mapping of SOZ in LAFA onset patterns by performing DCS in high EI nodes to distinguish seizure generators (true responders) from hyperexcitable nodes that may be involved in early propagation.
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Affiliation(s)
- Auriana Irannejad
- Department of Neurology, University of Alabama at Birmingham, Birmingham, AL, United States
- Epilepsy and Cognitive Neurophysiology Laboratory, University of Alabama at Birmingham, Birmingham, AL, United States
| | - Ganne Chaitanya
- Department of Neurology, University of Alabama at Birmingham, Birmingham, AL, United States
- Epilepsy and Cognitive Neurophysiology Laboratory, University of Alabama at Birmingham, Birmingham, AL, United States
| | - Emilia Toth
- Department of Neurology, University of Alabama at Birmingham, Birmingham, AL, United States
- Epilepsy and Cognitive Neurophysiology Laboratory, University of Alabama at Birmingham, Birmingham, AL, United States
| | - Diana Pizarro
- Department of Neurology, University of Alabama at Birmingham, Birmingham, AL, United States
- Epilepsy and Cognitive Neurophysiology Laboratory, University of Alabama at Birmingham, Birmingham, AL, United States
| | - Sandipan Pati
- Department of Neurology, University of Alabama at Birmingham, Birmingham, AL, United States
- Epilepsy and Cognitive Neurophysiology Laboratory, University of Alabama at Birmingham, Birmingham, AL, United States
- *Correspondence: Sandipan Pati
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21
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Zhang F, Yang Y, Zheng Y, Zhu J, Wang P, Xu K. Combination of Matching Responsive Stimulations of Hippocampus and Subiculum for Effective Seizure Suppression in Temporal Lobe Epilepsy. Front Neurol 2021; 12:638795. [PMID: 34512497 PMCID: PMC8426572 DOI: 10.3389/fneur.2021.638795] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2020] [Accepted: 06/22/2021] [Indexed: 11/13/2022] Open
Abstract
Responsive neural stimulation (RNS) is considered a promising neural modulation therapy for refractory epilepsy. Combined stimulation on different targets may hold great promise for improving the efficacy of seizure control since neural activity changed dynamically within associated brain targets in the epileptic network. Three major issues need to be further explored to achieve better efficacy of combined stimulation: (1) which nodes within the epileptogenic network should be chosen as stimulation targets? (2) What stimulus frequency should be delivered to different targets? and (3) Could the efficacy of RNS for seizure control be optimized by combined different stimulation targets together? In our current study, Granger causality (GC) method was applied to analyze epileptogenic networks for finding key targets of RNS. Single target stimulation (100 μA amplitude, 300 μs pulse width, 5s duration, biphasic, charge-balanced) with high frequency (130 Hz, HFS) or low frequency (5 Hz, LFS) was firstly delivered by our lab designed RNS systems to CA3, CA1, subiculum (SUB) of hippocampi, and anterior nucleus of thalamus (ANT). The efficacy of combined stimulation with different groups of frequencies was finally assessed to find out better combined key targets with optimal stimulus frequency. Our results showed that stimulation individually delivered to SUB and CA1 could shorten the average duration of seizures. Different stimulation frequencies impacted the efficacy of seizure control, as HFS delivered to CA1 and LFS delivered to SUB, respectively, were more effective for shortening the average duration of electrographic seizure in Sprague-Dawley rats (n = 3). Moreover, the synchronous stimulation of HFS in CA1 combined with LFS in SUB reduced the duration of discharge significantly in rats (n = 6). The combination of responsive stimulation at different targets may be an inspiration to optimize stimulation therapy for epilepsy.
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Affiliation(s)
- Fang Zhang
- Qiushi Academy for Advanced Studies, Zhejiang University, Hangzhou, China.,Key Laboratory of Biomedical Engineering of Education Ministry, Department of Biomedical Engineering Zhejiang University, Hangzhou, China.,Zhejiang Provincial Key Laboratory of Cardio-Cerebral Vascular Detection Technology and Medicinal Effectiveness Appraisal, Zhejiang University, Hangzhou, China
| | - Yufang Yang
- Qiushi Academy for Advanced Studies, Zhejiang University, Hangzhou, China.,Key Laboratory of Biomedical Engineering of Education Ministry, Department of Biomedical Engineering Zhejiang University, Hangzhou, China.,Zhejiang Provincial Key Laboratory of Cardio-Cerebral Vascular Detection Technology and Medicinal Effectiveness Appraisal, Zhejiang University, Hangzhou, China
| | - Yongte Zheng
- Qiushi Academy for Advanced Studies, Zhejiang University, Hangzhou, China.,Key Laboratory of Biomedical Engineering of Education Ministry, Department of Biomedical Engineering Zhejiang University, Hangzhou, China.,Zhejiang Provincial Key Laboratory of Cardio-Cerebral Vascular Detection Technology and Medicinal Effectiveness Appraisal, Zhejiang University, Hangzhou, China
| | - Junming Zhu
- Zhejiang Provincial Key Laboratory of Cardio-Cerebral Vascular Detection Technology and Medicinal Effectiveness Appraisal, Zhejiang University, Hangzhou, China.,Department of Neurosurgery, Second Affiliated Hospital of Zhejiang University, Hangzhou, China
| | - Ping Wang
- Key Laboratory of Biomedical Engineering of Education Ministry, Department of Biomedical Engineering Zhejiang University, Hangzhou, China
| | - Kedi Xu
- Qiushi Academy for Advanced Studies, Zhejiang University, Hangzhou, China.,Key Laboratory of Biomedical Engineering of Education Ministry, Department of Biomedical Engineering Zhejiang University, Hangzhou, China.,Zhejiang Provincial Key Laboratory of Cardio-Cerebral Vascular Detection Technology and Medicinal Effectiveness Appraisal, Zhejiang University, Hangzhou, China
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22
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Davis KA, Jirsa VK, Schevon CA. Wheels Within Wheels: Theory and Practice of Epileptic Networks. Epilepsy Curr 2021; 21:15357597211015663. [PMID: 33988042 PMCID: PMC8512917 DOI: 10.1177/15357597211015663] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023] Open
Affiliation(s)
- Kathryn A. Davis
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia, PA, USA
| | - Viktor K. Jirsa
- Aix-Marseille Universite, Marseille, Provence-Alpes-Cote d’Azu, France
- INSERM, Paris, Ile-de-France, France
- Institute de Neurosciences des Systemes,
Marseille, Provence-Alpes-Cote d’Azu, France
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23
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Sip V, Scholly J, Guye M, Bartolomei F, Jirsa V. Evidence for spreading seizure as a cause of theta-alpha activity electrographic pattern in stereo-EEG seizure recordings. PLoS Comput Biol 2021; 17:e1008731. [PMID: 33635864 PMCID: PMC7946361 DOI: 10.1371/journal.pcbi.1008731] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2020] [Revised: 03/10/2021] [Accepted: 01/21/2021] [Indexed: 02/07/2023] Open
Abstract
Intracranial electroencephalography is a standard tool in clinical evaluation of patients with focal epilepsy. Various early electrographic seizure patterns differing in frequency, amplitude, and waveform of the oscillations are observed. The pattern most common in the areas of seizure propagation is the so-called theta-alpha activity (TAA), whose defining features are oscillations in the θ - α range and gradually increasing amplitude. A deeper understanding of the mechanism underlying the generation of the TAA pattern is however lacking. In this work we evaluate the hypothesis that the TAA patterns are caused by seizures spreading across the cortex. To do so, we perform simulations of seizure dynamics on detailed patient-derived cortical surfaces using the spreading seizure model as well as reference models with one or two homogeneous sources. We then detect the occurrences of the TAA patterns both in the simulated stereo-electroencephalographic signals and in the signals of recorded epileptic seizures from a cohort of fifty patients, and we compare the features of the groups of detected TAA patterns to assess the plausibility of the different models. Our results show that spreading seizure hypothesis is qualitatively consistent with the evidence available in the seizure recordings, and it can explain the features of the detected TAA groups best among the examined models.
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Affiliation(s)
- Viktor Sip
- Aix Marseille Univ, INSERM, INS, Inst Neurosci Syst, Marseille, France
| | - Julia Scholly
- Assistance Publique - Hôpitaux de Marseille, Hôpital de la Timone, CEMEREM, Pôle d’Imagerie Médicale, CHU, Marseille, France
- Assistance Publique - Hôpitaux de Marseille, Hôpital de la Timone, Service de Neurophysiologie Clinique, CHU, Marseille, France
| | - Maxime Guye
- Assistance Publique - Hôpitaux de Marseille, Hôpital de la Timone, CEMEREM, Pôle d’Imagerie Médicale, CHU, Marseille, France
- Aix Marseille Univ, CNRS, CRMBM, Marseille, France
| | - Fabrice Bartolomei
- Aix Marseille Univ, INSERM, INS, Inst Neurosci Syst, Marseille, France
- Assistance Publique - Hôpitaux de Marseille, Hôpital de la Timone, Service de Neurophysiologie Clinique, CHU, Marseille, France
| | - Viktor Jirsa
- Aix Marseille Univ, INSERM, INS, Inst Neurosci Syst, Marseille, France
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24
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Sip V, Hashemi M, Vattikonda AN, Woodman MM, Wang H, Scholly J, Medina Villalon S, Guye M, Bartolomei F, Jirsa VK. Data-driven method to infer the seizure propagation patterns in an epileptic brain from intracranial electroencephalography. PLoS Comput Biol 2021; 17:e1008689. [PMID: 33596194 PMCID: PMC7920393 DOI: 10.1371/journal.pcbi.1008689] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2020] [Revised: 03/01/2021] [Accepted: 01/10/2021] [Indexed: 02/07/2023] Open
Abstract
Surgical interventions in epileptic patients aimed at the removal of the epileptogenic zone have success rates at only 60-70%. This failure can be partly attributed to the insufficient spatial sampling by the implanted intracranial electrodes during the clinical evaluation, leading to an incomplete picture of spatio-temporal seizure organization in the regions that are not directly observed. Utilizing the partial observations of the seizure spreading through the brain network, complemented by the assumption that the epileptic seizures spread along the structural connections, we infer if and when are the unobserved regions recruited in the seizure. To this end we introduce a data-driven model of seizure recruitment and propagation across a weighted network, which we invert using the Bayesian inference framework. Using a leave-one-out cross-validation scheme on a cohort of 45 patients we demonstrate that the method can improve the predictions of the states of the unobserved regions compared to an empirical estimate that does not use the structural information, yet it is on the same level as the estimate that takes the structure into account. Furthermore, a comparison with the performed surgical resection and the surgery outcome indicates a link between the inferred excitable regions and the actual epileptogenic zone. The results emphasize the importance of the structural connectome in the large-scale spatio-temporal organization of epileptic seizures and introduce a novel way to integrate the patient-specific connectome and intracranial seizure recordings in a whole-brain computational model of seizure spread.
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Affiliation(s)
- Viktor Sip
- Aix Marseille Univ, INSERM, INS, Inst Neurosci Syst, Marseille, France
| | - Meysam Hashemi
- Aix Marseille Univ, INSERM, INS, Inst Neurosci Syst, Marseille, France
| | | | | | - Huifang Wang
- Aix Marseille Univ, INSERM, INS, Inst Neurosci Syst, Marseille, France
| | - Julia Scholly
- Assistance Publique - Hôpitaux de Marseille, Hôpital de la Timone, CEMEREM, Pôle d’Imagerie Médicale, CHU, Marseille, France
- Assistance Publique - Hôpitaux de Marseille, Hôpital de la Timone, Service de Neurophysiologie Clinique, CHU, Marseille, France
| | - Samuel Medina Villalon
- Aix Marseille Univ, INSERM, INS, Inst Neurosci Syst, Marseille, France
- Assistance Publique - Hôpitaux de Marseille, Hôpital de la Timone, Service de Neurophysiologie Clinique, CHU, Marseille, France
| | - Maxime Guye
- Assistance Publique - Hôpitaux de Marseille, Hôpital de la Timone, CEMEREM, Pôle d’Imagerie Médicale, CHU, Marseille, France
- Aix Marseille Univ, CNRS, CRMBM, Marseille, France
| | - Fabrice Bartolomei
- Aix Marseille Univ, INSERM, INS, Inst Neurosci Syst, Marseille, France
- Assistance Publique - Hôpitaux de Marseille, Hôpital de la Timone, Service de Neurophysiologie Clinique, CHU, Marseille, France
| | - Viktor K. Jirsa
- Aix Marseille Univ, INSERM, INS, Inst Neurosci Syst, Marseille, France
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25
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Carvalho VR, Moraes MFD, Cash SS, Mendes EMAM. Active probing to highlight approaching transitions to ictal states in coupled neural mass models. PLoS Comput Biol 2021; 17:e1008377. [PMID: 33493165 PMCID: PMC7861539 DOI: 10.1371/journal.pcbi.1008377] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2020] [Revised: 02/04/2021] [Accepted: 12/02/2020] [Indexed: 01/07/2023] Open
Abstract
The extraction of electrophysiological features that reliably forecast the occurrence of seizures is one of the most challenging goals in epilepsy research. Among possible approaches to tackle this problem is the use of active probing paradigms in which responses to stimuli are used to detect underlying system changes leading up to seizures. This work evaluates the theoretical and mechanistic underpinnings of this strategy using two coupled populations of the well-studied Wendling neural mass model. Different model settings are evaluated, shifting parameters (excitability, slow inhibition, or inter-population coupling gains) from normal towards ictal states while probing stimuli are applied every 2 seconds to the input of either one or both populations. The correlation between the extracted features and the ictogenic parameter shifting indicates if the impending transition to the ictal state may be identified in advance. Results show that not only can the response to the probing stimuli forecast seizures but this is true regardless of the altered ictogenic parameter. That is, similar feature changes are highlighted by probing stimuli responses in advance of the seizure including: increased response variance and lag-1 autocorrelation, decreased skewness, and increased mutual information between the outputs of both model subsets. These changes were mostly restricted to the stimulated population, showing a local effect of this perturbational approach. The transition latencies from normal activity to sustained discharges of spikes were not affected, suggesting that stimuli had no pro-ictal effects. However, stimuli were found to elicit interictal-like spikes just before the transition to the ictal state. Furthermore, the observed feature changes highlighted by probing the neuronal populations may reflect the phenomenon of critical slowing down, where increased recovery times from perturbations may signal the loss of a systems' resilience and are common hallmarks of an impending critical transition. These results provide more evidence that active probing approaches highlight information about underlying system changes involved in ictogenesis and may be able to play a role in assisting seizure forecasting methods which can be incorporated into early-warning systems that ultimately enable closing the loop for targeted seizure-controlling interventions.
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Affiliation(s)
- Vinícius Rezende Carvalho
- Programa de Pós-Graduação em Engenharia Elétrica, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
- Núcleo de Neurociências, Departamento de Fisiologia e Biofísica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
- Department of Neurology, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America
| | - Márcio Flávio Dutra Moraes
- Núcleo de Neurociências, Departamento de Fisiologia e Biofísica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
- Centro de Tecnologia e Pesquisa em Magneto-Ressonância, Escola de Engenharia, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
| | - Sydney S. Cash
- Department of Neurology, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America
| | - Eduardo Mazoni Andrade Marçal Mendes
- Programa de Pós-Graduação em Engenharia Elétrica, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
- Núcleo de Neurociências, Departamento de Fisiologia e Biofísica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
- Centro de Tecnologia e Pesquisa em Magneto-Ressonância, Escola de Engenharia, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
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26
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Peng SJ, Wong TT, Huang CC, Chang H, Hsieh KLC, Tsai ML, Yang YS, Chen CL. Quantitative analysis of intraoperative electrocorticography mirrors histopathology and seizure outcome after epileptic surgery in children. J Formos Med Assoc 2020; 120:1500-1511. [PMID: 33214033 DOI: 10.1016/j.jfma.2020.11.001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2020] [Revised: 10/21/2020] [Accepted: 11/01/2020] [Indexed: 01/27/2023] Open
Abstract
BACKGROUND Epileptic surgery is the potentially curative treatment for children with refractory seizures. The study aimed to quantify and analyze high frequency oscillation (HFO) ripples and interictal epileptiform discharges (EDs) in intraoperative electrocorticography (ECoG) between malformation of cortical dysplasia (MCD) and non-MCD children with MRI-lesional focal epilepsy, and evaluate of seizure outcomes after epileptic surgery. METHODS The intraoperative ECoG was performed before and after lesionectomy. Quantifications of HFO ripples and interictal EDs of ECoG by frequency, amplitude, and foci of intraoperative ECoG were performed based on electrode location, and the characteristics of ECoG recordings were analyzed in each patient based on their histopathology. Seizure outcome after surgery according to their quantitative ECoG findings was analyzed. RESULTS Frequency of EDs and HFO ripple rates in preresection ECoG were significantly higher in children with MCD compared with non-MCD (p = 0.018 and p = 0.002, respectively). Higher frequencies of EDs and ripple rates in preresection ECoG were observed in residual seizures than in seizure-free children (p = 0.045 and p = 0.005, respectively). Clinically, children with residual seizures after surgery were significantly younger at the onset, had a trend of higher seizure frequency and higher spike frequency of presurgical videoEEG. CONCLUSION Our results suggested that quantification of intraoperative ECoG predicted seizure outcomes and reflected different ED pattern and frequencies between MCD and non-dysplastic histopathology among children who underwent resective epileptic surgery. The results of our study were encouraging and indicated that intraoperative ECoG improved the outcomes of surgery in children with epilepsy.
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Affiliation(s)
- Syu-Jyun Peng
- Program in Artificial Intelligence in Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan
| | - Tai-Tong Wong
- Division of Pediatric Neurosurgery, Department of Neurosurgery, Taipei Medical University Hospital, Taipei Medical University, Taipei, Taiwan; Graduate Institute of Clinical Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan; Neuroscience Research Center, Taipei Medical University Hospital, Taipei, Taiwan
| | - Chao-Ching Huang
- Department of Pediatrics, National Cheng Kung University Hospital, College of Medicine, National Cheng Kung University, Tainan, Taiwan; Department of Pediatrics, School of Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan
| | - Hsi Chang
- Neuroscience Research Center, Taipei Medical University Hospital, Taipei, Taiwan; Division of Pediatric Neurology, Department of Pediatrics, Taipei Medical University Hospital, Taipei Medical University, Taiwan; Department of Pediatrics, School of Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan
| | - Kevin Li-Chun Hsieh
- Neuroscience Research Center, Taipei Medical University Hospital, Taipei, Taiwan; Department of Medical Imaging, Taipei Medical University Hospital, Taipei, Taiwan; Department of Radiology, School of Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan
| | - Min-Lan Tsai
- Neuroscience Research Center, Taipei Medical University Hospital, Taipei, Taiwan; Division of Pediatric Neurology, Department of Pediatrics, Taipei Medical University Hospital, Taipei Medical University, Taiwan; Department of Pediatrics, School of Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan.
| | - Yi-Shang Yang
- Division of Pediatric Neurosurgery, Department of Neurosurgery, Taipei Medical University Hospital, Taipei Medical University, Taipei, Taiwan
| | - Chi-Long Chen
- Department of Pathology, Taipei Medical University Hospital, Taipei Medical University, Taipei, Taiwan; Department of Pathology, School of Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan
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27
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Zhang L, Wang Q, Baier G. Spontaneous transitions to focal-onset epileptic seizures: A dynamical study. CHAOS (WOODBURY, N.Y.) 2020; 30:103114. [PMID: 33138464 DOI: 10.1063/5.0021693] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2020] [Accepted: 09/09/2020] [Indexed: 06/11/2023]
Abstract
Given the complex temporal evolution of epileptic seizures, understanding their dynamic nature might be beneficial for clinical diagnosis and treatment. Yet, the mechanisms behind, for instance, the onset of seizures are still unknown. According to an existing classification, two basic types of dynamic onset patterns plus a number of more complex onset waveforms can be distinguished. Here, we introduce a basic three-variable model with two time scales to study potential mechanisms of spontaneous seizure onset. We expand the model to demonstrate how coupling of oscillators leads to more complex seizure onset waveforms. Finally, we test the response to pulse perturbation as a potential biomarker of interictal changes.
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Affiliation(s)
- Liyuan Zhang
- Department of Biomedical Engineering, Faculty of Environment and Life, Beijing University of Technology, 100124 Beijing, China
| | - Qingyun Wang
- Department of Dynamics and Control, Beihang University, 100191 Beijing, China
| | - Gerold Baier
- Cell and Developmental Biology, University College London, London WC1E 6BT, United Kingdom
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28
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Creaser J, Lin C, Ridler T, Brown JT, D’Souza W, Seneviratne U, Cook M, Terry JR, Tsaneva-Atanasova K. Domino-like transient dynamics at seizure onset in epilepsy. PLoS Comput Biol 2020; 16:e1008206. [PMID: 32986695 PMCID: PMC7544071 DOI: 10.1371/journal.pcbi.1008206] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2019] [Revised: 10/08/2020] [Accepted: 07/29/2020] [Indexed: 12/20/2022] Open
Abstract
The International League Against Epilepsy (ILAE) groups seizures into "focal", "generalized" and "unknown" based on whether the seizure onset is confined to a brain region in one hemisphere, arises in several brain region simultaneously, or is not known, respectively. This separation fails to account for the rich diversity of clinically and experimentally observed spatiotemporal patterns of seizure onset and even less so for the properties of the brain networks generating them. We consider three different patterns of domino-like seizure onset in Idiopathic Generalized Epilepsy (IGE) and present a novel approach to classification of seizures. To understand how these patterns are generated on networks requires understanding of the relationship between intrinsic node dynamics and coupling between nodes in the presence of noise, which currently is unknown. We investigate this interplay here in the framework of domino-like recruitment across a network. In particular, we use a phenomenological model of seizure onset with heterogeneous coupling and node properties, and show that in combination they generate a range of domino-like onset patterns observed in the IGE seizures. We further explore the individual contribution of heterogeneous node dynamics and coupling by interpreting in-vitro experimental data in which the speed of onset can be chemically modulated. This work contributes to a better understanding of possible drivers for the spatiotemporal patterns observed at seizure onset and may ultimately contribute to a more personalized approach to classification of seizure types in clinical practice.
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Affiliation(s)
- Jennifer Creaser
- Department of Mathematics, University of Exeter, Exeter, EX4 4QF, UK
- EPSRC Centre for Predictive modeling in Healthcare, University of Exeter, Exeter, EX4 4QJ, UK
| | - Congping Lin
- Center for Mathematical Sciences, Huazhong University of Science and Technology, Wuhan, Hubei 430074, China
- Hubei Key Lab of Engineering Modeling and Scientific Computing, Huazhong University of Science and Technology, Wuhan, Hubei 430074, China
| | - Thomas Ridler
- Institute of Biomedical and Clinical Sciences, College of Medicine and Health, University of Exeter, EX4 4PS, UK
| | - Jonathan T. Brown
- Institute of Biomedical and Clinical Sciences, College of Medicine and Health, University of Exeter, EX4 4PS, UK
| | - Wendyl D’Souza
- Department of Medicine, St. Vincent’s Hospital, University of Melbourne, Melbourne, VIC 3065, Australia
| | - Udaya Seneviratne
- Department of Medicine, St. Vincent’s Hospital, University of Melbourne, Melbourne, VIC 3065, Australia
- Department of Neuroscience, Monash Medical Centre, Melbourne, VIC 3168, Australia
| | - Mark Cook
- Department of Medicine, St. Vincent’s Hospital, University of Melbourne, Melbourne, VIC 3065, Australia
- Graeme Clark Institute, University of Melbourne, Parkville, VIC 3010, Australia
| | - John R. Terry
- EPSRC Centre for Predictive modeling in Healthcare, University of Exeter, Exeter, EX4 4QJ, UK
- Centre for Systems Modelling and Quantitative Biomedicine, University of Birmingham, Birmingham, B15 2TT, UK
| | - Krasimira Tsaneva-Atanasova
- Department of Mathematics, University of Exeter, Exeter, EX4 4QF, UK
- EPSRC Centre for Predictive modeling in Healthcare, University of Exeter, Exeter, EX4 4QJ, UK
- Living System Institute, University of Exeter, Exeter, EX4 4QJ, UK
- Institute for Advanced Study, Technical University of Munich, Lichtenbergstrasse 2a, D-85748 Garching, Germany
- Department of Bioinformatics and Mathematical Modelling, Institute of Biophysics and Biomedical Engineering, Bulgarian Academy of Sciences, 105 Acad. G. Bonchev Str, 1113 Sofia, Bulgaria
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29
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Kini LG, Bernabei JM, Mikhail F, Hadar P, Shah P, Khambhati AN, Oechsel K, Archer R, Boccanfuso J, Conrad E, Shinohara RT, Stein JM, Das S, Kheder A, Lucas TH, Davis KA, Bassett DS, Litt B. Virtual resection predicts surgical outcome for drug-resistant epilepsy. Brain 2020; 142:3892-3905. [PMID: 31599323 DOI: 10.1093/brain/awz303] [Citation(s) in RCA: 73] [Impact Index Per Article: 14.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2019] [Revised: 07/11/2019] [Accepted: 08/08/2019] [Indexed: 12/13/2022] Open
Abstract
Patients with drug-resistant epilepsy often require surgery to become seizure-free. While laser ablation and implantable stimulation devices have lowered the morbidity of these procedures, seizure-free rates have not dramatically improved, particularly for patients without focal lesions. This is in part because it is often unclear where to intervene in these cases. To address this clinical need, several research groups have published methods to map epileptic networks but applying them to improve patient care remains a challenge. In this study we advance clinical translation of these methods by: (i) presenting and sharing a robust pipeline to rigorously quantify the boundaries of the resection zone and determining which intracranial EEG electrodes lie within it; (ii) validating a brain network model on a retrospective cohort of 28 patients with drug-resistant epilepsy implanted with intracranial electrodes prior to surgical resection; and (iii) sharing all neuroimaging, annotated electrophysiology, and clinical metadata to facilitate future collaboration. Our network methods accurately forecast whether patients are likely to benefit from surgical intervention based on synchronizability of intracranial EEG (area under the receiver operating characteristic curve of 0.89) and provide novel information that traditional electrographic features do not. We further report that removing synchronizing brain regions is associated with improved clinical outcome, and postulate that sparing desynchronizing regions may further be beneficial. Our findings suggest that data-driven network-based methods can identify patients likely to benefit from resective or ablative therapy, and perhaps prevent invasive interventions in those unlikely to do so.
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Affiliation(s)
- Lohith G Kini
- Department of Bioengineering, University of Pennsylvania, Philadelphia PA 19104, USA.,Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia PA 19104, USA
| | - John M Bernabei
- Department of Bioengineering, University of Pennsylvania, Philadelphia PA 19104, USA.,Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia PA 19104, USA
| | - Fadi Mikhail
- Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia PA 19104, USA.,Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia PA 19104, USA
| | - Peter Hadar
- Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia PA 19104, USA.,Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia PA 19104, USA
| | - Preya Shah
- Department of Bioengineering, University of Pennsylvania, Philadelphia PA 19104, USA.,Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia PA 19104, USA
| | - Ankit N Khambhati
- Department of Neurological Surgery, University of California San Francisco, San Francisco CA 94143, USA
| | - Kelly Oechsel
- Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia PA 19104, USA.,Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia PA 19104, USA
| | - Ryan Archer
- Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia PA 19104, USA.,Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia PA 19104, USA
| | - Jacqueline Boccanfuso
- Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia PA 19104, USA.,Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia PA 19104, USA
| | - Erin Conrad
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia PA 19104, USA
| | - Russell T Shinohara
- Department of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania, Philadelphia PA 19104, USA.,Center for Biomedical Image Computing and Analytics, University of Pennsylvania, Philadelphia PA 19104, USA
| | - Joel M Stein
- Department of Radiology, Hospital of the University of Pennsylvania, Philadelphia PA 19104, USA
| | - Sandhitsu Das
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia PA 19104, USA
| | - Ammar Kheder
- Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia PA 19104, USA
| | - Timothy H Lucas
- Department of Neurosurgery, Hospital of the University of Pennsylvania, Philadelphia PA 19104, USA
| | - Kathryn A Davis
- Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia PA 19104, USA.,Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia PA 19104, USA
| | - Danielle S Bassett
- Department of Bioengineering, University of Pennsylvania, Philadelphia PA 19104, USA.,Department of Electrical and Systems Engineering, University of Pennsylvania, Philadelphia PA 19104, USA.,Department of Physics and Astronomy, University of Pennsylvania, Philadelphia PA 19104, USA.,Department of Psychiatry, Hospital of the University of Pennsylvania, Philadelphia PA 19104, USA
| | - Brian Litt
- Department of Bioengineering, University of Pennsylvania, Philadelphia PA 19104, USA.,Center for Neuroengineering and Therapeutics, University of Pennsylvania, Philadelphia PA 19104, USA.,Department of Neurology, Hospital of the University of Pennsylvania, Philadelphia PA 19104, USA.,Department of Neurosurgery, Hospital of the University of Pennsylvania, Philadelphia PA 19104, USA
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30
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Schroeder GM, Diehl B, Chowdhury FA, Duncan JS, de Tisi J, Trevelyan AJ, Forsyth R, Jackson A, Taylor PN, Wang Y. Seizure pathways change on circadian and slower timescales in individual patients with focal epilepsy. Proc Natl Acad Sci U S A 2020; 117:11048-11058. [PMID: 32366665 PMCID: PMC7245106 DOI: 10.1073/pnas.1922084117] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023] Open
Abstract
Personalized medicine requires that treatments adapt to not only the patient but also changing factors within each individual. Although epilepsy is a dynamic disorder characterized by pathological fluctuations in brain state, surprisingly little is known about whether and how seizures vary in the same patient. We quantitatively compared within-patient seizure network evolutions using intracranial electroencephalographic (iEEG) recordings of over 500 seizures from 31 patients with focal epilepsy (mean 16.5 seizures per patient). In all patients, we found variability in seizure paths through the space of possible network dynamics. Seizures with similar pathways tended to occur closer together in time, and a simple model suggested that seizure pathways change on circadian and/or slower timescales in the majority of patients. These temporal relationships occurred independent of whether the patient underwent antiepileptic medication reduction. Our results suggest that various modulatory processes, operating at different timescales, shape within-patient seizure evolutions, leading to variable seizure pathways that may require tailored treatment approaches.
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Affiliation(s)
- Gabrielle M Schroeder
- Interdisciplinary Computing and Complex BioSystems Group, School of Computing Science, Newcastle University, Newcastle upon Tyne, NE4 5TG, United Kingdom
| | - Beate Diehl
- UCL Queen Square Institute of Neurology, University College London, London, WC1N 3BG, United Kingdom
| | - Fahmida A Chowdhury
- UCL Queen Square Institute of Neurology, University College London, London, WC1N 3BG, United Kingdom
| | - John S Duncan
- UCL Queen Square Institute of Neurology, University College London, London, WC1N 3BG, United Kingdom
| | - Jane de Tisi
- UCL Queen Square Institute of Neurology, University College London, London, WC1N 3BG, United Kingdom
| | - Andrew J Trevelyan
- Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, NE2 4HH, United Kingdom
| | - Rob Forsyth
- Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, NE2 4HH, United Kingdom
| | - Andrew Jackson
- Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, NE2 4HH, United Kingdom
| | - Peter N Taylor
- Interdisciplinary Computing and Complex BioSystems Group, School of Computing Science, Newcastle University, Newcastle upon Tyne, NE4 5TG, United Kingdom
- UCL Queen Square Institute of Neurology, University College London, London, WC1N 3BG, United Kingdom
- Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, NE2 4HH, United Kingdom
| | - Yujiang Wang
- Interdisciplinary Computing and Complex BioSystems Group, School of Computing Science, Newcastle University, Newcastle upon Tyne, NE4 5TG, United Kingdom;
- UCL Queen Square Institute of Neurology, University College London, London, WC1N 3BG, United Kingdom
- Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, NE2 4HH, United Kingdom
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31
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Chizhov AV, Sanin AE. A simple model of epileptic seizure propagation: Potassium diffusion versus axo-dendritic spread. PLoS One 2020; 15:e0230787. [PMID: 32275724 PMCID: PMC7147746 DOI: 10.1371/journal.pone.0230787] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2019] [Accepted: 03/08/2020] [Indexed: 12/29/2022] Open
Abstract
The mechanisms of epileptic discharge generation and spread are not yet fully known. A recently proposed simple biophysical model of interictal and ictal discharges, Epileptor-2, reproduces well the main features of neuronal excitation and ionic dynamics during discharge generation. In order to distinguish between two hypothesized mechanisms of discharge propagation, we extend the model to the case of two-dimensional propagation along the cortical neural tissue. The first mechanism is based on extracellular potassium diffusion, and the second is the propagation of spikes and postsynaptic signals along axons and dendrites. Our simulations show that potassium diffusion is too slow to reproduce an experimentally observed speed of ictal wavefront propagation (tenths of mm/s). By contrast, the synaptic mechanism predicts well the speed and synchronization of the pre-ictal bursts before the ictal front and the afterdischarges in the ictal core. Though this fact diminishes the role of diffusion and electrodiffusion, the model nevertheless highlights the role of potassium extrusion during neuronal excitation, which provides a positive feedback that changes at the ictal wavefront the balance of excitation versus inhibition in favor of excitation. This finding may help to find a target for a treatment to prevent seizure propagation.
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Affiliation(s)
- Anton V. Chizhov
- Computational Physics Laboratory, Ioffe Institute, Saint Petersburg, Russia
- Laboratory of Molecular Mechanisms of Neural Interactions, Sechenov Institute of Evolutionary Physiology and Biochemistry of the Russian Academy of Sciences, Saint Petersburg, Russia
| | - Aleksei E. Sanin
- Laboratory of Molecular Mechanisms of Neural Interactions, Sechenov Institute of Evolutionary Physiology and Biochemistry of the Russian Academy of Sciences, Saint Petersburg, Russia
- Blue Brain Project, École polytechnique fédérale de Lausanne (EPFL), Campus Biotech, Geneva, Switzerland
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32
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Liou JY, Smith EH, Bateman LM, Bruce SL, McKhann GM, Goodman RR, Emerson RG, Schevon CA, Abbott LF. A model for focal seizure onset, propagation, evolution, and progression. eLife 2020; 9:50927. [PMID: 32202494 PMCID: PMC7089769 DOI: 10.7554/elife.50927] [Citation(s) in RCA: 48] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2019] [Accepted: 03/04/2020] [Indexed: 12/16/2022] Open
Abstract
We developed a neural network model that can account for major elements common to human focal seizures. These include the tonic-clonic transition, slow advance of clinical semiology and corresponding seizure territory expansion, widespread EEG synchronization, and slowing of the ictal rhythm as the seizure approaches termination. These were reproduced by incorporating usage-dependent exhaustion of inhibition in an adaptive neural network that receives global feedback inhibition in addition to local recurrent projections. Our model proposes mechanisms that may underline common EEG seizure onset patterns and status epilepticus, and postulates a role for synaptic plasticity in the emergence of epileptic foci. Complex patterns of seizure activity and bi-stable seizure end-points arise when stochastic noise is included. With the rapid advancement of clinical and experimental tools, we believe that this model can provide a roadmap and potentially an in silico testbed for future explorations of seizure mechanisms and clinical therapies.
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Affiliation(s)
- Jyun-You Liou
- Department of Physiology and Cellular Biophysics, Columbia University, New York, United States.,Department of Anesthesiology, NewYork-Presbyterian Hospital/Weill Cornell Medicine, New York, United States.,Department of Neurology, Columbia University Medical Center, New York, United States
| | - Elliot H Smith
- Department of Neurological Surgery, Columbia University Medical Center, New York, United States
| | - Lisa M Bateman
- Department of Neurology, Columbia University Medical Center, New York, United States
| | - Samuel L Bruce
- Vagelos College of Physicians & Surgeons, Columbia University, New York, United States
| | - Guy M McKhann
- Department of Neurological Surgery, Columbia University Medical Center, New York, United States
| | - Robert R Goodman
- Department of Neurological Surgery, Columbia University Medical Center, New York, United States
| | - Ronald G Emerson
- Department of Neurology, Columbia University Medical Center, New York, United States
| | - Catherine A Schevon
- Department of Neurology, Columbia University Medical Center, New York, United States
| | - L F Abbott
- Department of Physiology and Cellular Biophysics, Columbia University, New York, United States.,Mortimer B. Zuckerman Mind Brain Behavior Institute, Department of Neuroscience, Columbia University, New York, United States
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Yousif N, Bain PG, Nandi D, Borisyuk R. A Population Model of Deep Brain Stimulation in Movement Disorders From Circuits to Cells. Front Hum Neurosci 2020; 14:55. [PMID: 32210779 PMCID: PMC7066497 DOI: 10.3389/fnhum.2020.00055] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2019] [Accepted: 02/05/2020] [Indexed: 01/04/2023] Open
Abstract
For more than 30 years, deep brain stimulation (DBS) has been used to target the symptoms of a number of neurological disorders and in particular movement disorders such as Parkinson’s disease (PD) and essential tremor (ET). It is known that the loss of dopaminergic neurons in the substantia nigra leads to PD, while the exact impact of this on the brain dynamics is not fully understood, the presence of beta-band oscillatory activity is thought to be pathological. The cause of ET, however, remains uncertain, however pathological oscillations in the thalamocortical-cerebellar network have been linked to tremor. Both of these movement disorders are treated with DBS, which entails the surgical implantation of electrodes into a patient’s brain. While DBS leads to an improvement in symptoms for many patients, the mechanisms underlying this improvement is not clearly understood, and computational modeling has been used extensively to improve this. Many of the models used to study DBS and its effect on the human brain have mainly utilized single neuron and single axon biophysical models. We have previously shown in separate models however, that the use of population models can shed much light on the mechanisms of the underlying pathological neural activity in PD and ET in turn, and on the mechanisms underlying DBS. Together, this work suggested that the dynamics of the cerebellar-basal ganglia thalamocortical network support oscillations at frequency range relevant to movement disorders. Here, we propose a new combined model of this network and present new results that demonstrate that both Parkinsonian oscillations in the beta band and oscillations in the tremor frequency range arise from the dynamics of such a network. We find regions in the parameter space demonstrating the different dynamics and go on to examine the transition from one oscillatory regime to another as well as the impact of DBS on these different types of pathological activity. This work will allow us to better understand the changes in brain activity induced by DBS, and allow us to optimize this clinical therapy, particularly in terms of target selection and parameter setting.
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Affiliation(s)
- Nada Yousif
- School of Engineering and Computer Science, University of Hertfordshire, Hatfield, United Kingdom
| | - Peter G Bain
- Division of Brain Sciences, Imperial College Healthcare NHS Trust, Faculty of Medicine, Imperial College London, London, United Kingdom
| | - Dipankar Nandi
- Division of Brain Sciences, Imperial College Healthcare NHS Trust, Faculty of Medicine, Imperial College London, London, United Kingdom
| | - Roman Borisyuk
- College of Engineering, Mathematics and Physical Sciences, University of Exeter, Exeter, United Kingdom.,Institute of Mathematical Problems of Biology, The Branch of Keldysh Institute of Applied Mathematics of Russian Academy of Sciences, Pushchino, Russia
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34
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Gill BJA, Wu X, Khan FA, Sosunov AA, Liou JY, Dovas A, Eissa TL, Banu MA, Bateman LM, McKhann GM, Canoll P, Schevon C. Ex vivo multi-electrode analysis reveals spatiotemporal dynamics of ictal behavior at the infiltrated margin of glioma. Neurobiol Dis 2019; 134:104676. [PMID: 31731042 PMCID: PMC8147009 DOI: 10.1016/j.nbd.2019.104676] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2019] [Revised: 10/22/2019] [Accepted: 11/11/2019] [Indexed: 01/02/2023] Open
Abstract
The purpose of this study is to develop a platform in which the cellular and molecular underpinnings of chronic focal neocortical lesional epilepsy can be explored and use it to characterize seizure-like events (SLEs) in an ex vivo model of infiltrating high-grade glioma. Microelectrode arrays were used to study electrophysiologic changes in ex vivo acute brain slices from a PTEN/p53 deleted, PDGF-B driven mouse model of high-grade glioma. Electrode locations were co-registered to the underlying histology to ascertain the influence of the varying histologic landscape on the observed electrophysiologic changes. Peritumoral, infiltrated, and tumor sites were sampled in tumor-bearing slices. Following the addition of zero Mg2+ solution, all three histologic regions in tumor-bearing slices showed significantly greater increases in firing rates when compared to the control sites. Tumor-bearing slices demonstrated increased proclivity for SLEs, with 40 events in tumor-bearing slices and 5 events in control slices (p-value = .0105). Observed SLEs were characterized by either low voltage fast (LVF) onset patterns or short bursts of repetitive widespread, high amplitude low frequency discharges. Seizure foci comprised areas from all three histologic regions. The onset electrode was found to be at the infiltrated margin in 50% of cases and in the peritumoral region in 36.9% of cases. These findings reveal a landscape of histopathologic and electrophysiologic alterations associated with ictogenesis and spread of tumor-associated seizures.
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Affiliation(s)
- Brian J A Gill
- Department of Neurological Surgery, Columbia University Medical Center, New York, NY, USA.
| | - Xiaoping Wu
- Department of Neurological Surgery, Columbia University Medical Center, New York, NY, USA
| | - Farhan A Khan
- Department of Neurological Surgery, Columbia University Medical Center, New York, NY, USA
| | - Alexander A Sosunov
- Department of Neurological Surgery, Columbia University Medical Center, New York, NY, USA
| | - Jyun-You Liou
- Department of Physiology and Cellular Biophysics, Columbia University, New York, NY, USA
| | - Athanassios Dovas
- Department of Pathology and Cell Biology, Columbia University Medical Center, New York, NY, USA
| | - Tahra L Eissa
- Department of Applied Mathematics, University of Colorado at Boulder, Boulder, CO, USA
| | - Matei A Banu
- Department of Neurological Surgery, Columbia University Medical Center, New York, NY, USA
| | - Lisa M Bateman
- Department of Neurology, Columbia University Medical Center, New York, NY, USA
| | - Guy M McKhann
- Department of Neurological Surgery, Columbia University Medical Center, New York, NY, USA
| | - Peter Canoll
- Department of Pathology and Cell Biology, Columbia University Medical Center, New York, NY, USA
| | - Catherine Schevon
- Department of Neurology, Columbia University Medical Center, New York, NY, USA
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35
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Xu K, Zheng Y, Zhang F, Jiang Z, Qi Y, Chen H, Zhu J. An Energy Efficient AdaBoost Cascade Method for Long-Term Seizure Detection in Portable Neurostimulators. IEEE Trans Neural Syst Rehabil Eng 2019; 27:2274-2283. [DOI: 10.1109/tnsre.2019.2947426] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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36
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Kalitzin S, Petkov G, Suffczynski P, Grigorovsky V, Bardakjian BL, Lopes da Silva F, Carlen PL. Epilepsy as a manifestation of a multistate network of oscillatory systems. Neurobiol Dis 2019; 130:104488. [DOI: 10.1016/j.nbd.2019.104488] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2019] [Revised: 06/03/2019] [Accepted: 06/04/2019] [Indexed: 12/18/2022] Open
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Lopes MA, Goodfellow M, Terry JR. A Model-Based Assessment of the Seizure Onset Zone Predictive Power to Inform the Epileptogenic Zone. Front Comput Neurosci 2019; 13:25. [PMID: 31105545 PMCID: PMC6498870 DOI: 10.3389/fncom.2019.00025] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2018] [Accepted: 04/10/2019] [Indexed: 02/03/2023] Open
Abstract
Epilepsy surgery is a clinical procedure that aims to remove the brain tissue responsible for the emergence of seizures, the epileptogenic zone (EZ). It is preceded by an evaluation to determine the brain tissue that must be resected. The identification of the seizure onset zone (SOZ) from intracranial EEG recordings stands as one of the key proxies for the EZ. In this study we used computational models of epilepsy to assess to what extent the SOZ may or may not represent the EZ. We considered a set of different synthetic networks (e.g., regular, small-world, random, and scale-free networks) to represent large-scale brain networks and a phenomenological network model of seizure generation. In the model, the SOZ was inferred from the seizure likelihood (SL), a measure of the propensity of single nodes to produce epileptiform dynamics, whilst a surgery corresponded to the removal of nodes and connections from the network. We used the concept of node ictogenicity (NI) to quantify the effectiveness of each node removal on reducing the network's propensity to generate seizures. This framework enabled us to systematically compare the SOZ and the seizure control achieved by each considered surgery. Specifically, we compared the distributions of SL and NI across different networks. We found that SL and NI were concordant when all nodes were similarly ictogenic, whereas when there was a small fraction of nodes with high NI, the SL was not specific at identifying these nodes. We further considered networks with heterogeneous node excitabilities, i.e., nodes with different susceptibilities of being engaged in seizure activity, to understand how such heterogeneity may affect the relationship between SL and NI. We found that while SL and NI are concordant when there is a small fraction of hyper-excitable nodes in a network that is otherwise homogeneous, they do diverge if the network is heterogeneous, such as in scale-free networks. We observe that SL is highly dependent on node excitabilities, whilst the effect of surgical resections as revealed by NI is mostly determined by network structure. Together our results suggest that the SOZ is not always a good marker of the EZ.
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Affiliation(s)
- Marinho A Lopes
- Living Systems Institute, University of Exeter, Exeter, United Kingdom.,Wellcome Trust Centre for Biomedical Modelling and Analysis, University of Exeter, Exeter, United Kingdom.,EPSRC Centre for Predictive Modelling in Healthcare, University of Exeter, Exeter, United Kingdom
| | - Marc Goodfellow
- Living Systems Institute, University of Exeter, Exeter, United Kingdom.,Wellcome Trust Centre for Biomedical Modelling and Analysis, University of Exeter, Exeter, United Kingdom.,EPSRC Centre for Predictive Modelling in Healthcare, University of Exeter, Exeter, United Kingdom
| | - John R Terry
- Living Systems Institute, University of Exeter, Exeter, United Kingdom.,Wellcome Trust Centre for Biomedical Modelling and Analysis, University of Exeter, Exeter, United Kingdom.,EPSRC Centre for Predictive Modelling in Healthcare, University of Exeter, Exeter, United Kingdom
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38
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Sinha N, Wang Y, Dauwels J, Kaiser M, Thesen T, Forsyth R, Taylor PN. Computer modelling of connectivity change suggests epileptogenesis mechanisms in idiopathic generalised epilepsy. NEUROIMAGE-CLINICAL 2019; 21:101655. [PMID: 30685702 PMCID: PMC6356007 DOI: 10.1016/j.nicl.2019.101655] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/11/2018] [Revised: 12/21/2018] [Accepted: 01/03/2019] [Indexed: 12/14/2022]
Abstract
Patients with idiopathic generalised epilepsy (IGE) typically have normal conventional magnetic resonance imaging (MRI), hence diagnosis based on MRI is challenging. Anatomical abnormalities underlying brain dysfunctions in IGE are unclear and their relation to the pathomechanisms of epileptogenesis is poorly understood. In this study, we applied connectometry, an advanced quantitative neuroimaging technique for investigating localised changes in white-matter tissues in vivo. Analysing white matter structures of 32 subjects we incorporated our in vivo findings in a computational model of seizure dynamics to suggest a plausible mechanism of epileptogenesis. Patients with IGE have significant bilateral alterations in major white-matter fascicles. In the cingulum, fornix, and superior longitudinal fasciculus, tract integrity is compromised, whereas in specific parts of tracts between thalamus and the precentral gyrus, tract integrity is enhanced in patients. Combining these alterations in a logistic regression model, we computed the decision boundary that discriminated patients and controls. The computational model, informed with the findings on the tract abnormalities, specifically highlighted the importance of enhanced cortico-reticular connections along with impaired cortico-cortical connections in inducing pathological seizure-like dynamics. We emphasise taking directionality of brain connectivity into consideration towards understanding the pathological mechanisms; this is possible by combining neuroimaging and computational modelling. Our imaging evidence of structural alterations suggest the loss of cortico-cortical and enhancement of cortico-thalamic fibre integrity in IGE. We further suggest that impaired connectivity from cortical regions to the thalamic reticular nucleus offers a therapeutic target for selectively modifying the brain circuit for reversing the mechanisms leading to epileptogenesis. Significant focal alterations along major white-matter fascicles in IGE patients are characterised. Increased white matter integrity found in thalamo-cortical connections. Decreased white matter integrity found in cortico-cortical connections. Disease mechanism is investigated by combining the neuroimaging findings with a dynamical model of seizure activity. Model implicates cortical projections to the thalamic reticular nucleus in IGE.
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Affiliation(s)
- Nishant Sinha
- Institute of Neuroscience, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK; Interdisciplinary Computing and Complex BioSystems Group, School of Computing, Newcastle University, Newcastle upon Tyne, UK.
| | - Yujiang Wang
- Institute of Neuroscience, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK; Interdisciplinary Computing and Complex BioSystems Group, School of Computing, Newcastle University, Newcastle upon Tyne, UK; Institute of Neurology, University College London, UK
| | - Justin Dauwels
- School of Electrical and Electronic Engineering, Nanyang Technological University, Singapore
| | - Marcus Kaiser
- Institute of Neuroscience, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK; Interdisciplinary Computing and Complex BioSystems Group, School of Computing, Newcastle University, Newcastle upon Tyne, UK
| | - Thomas Thesen
- Department of Neurology, School of Medicine, New York University, NY, USA; Department of Physiology and Neuroscience, St. Georges University, Grenada, West Indies
| | - Rob Forsyth
- Institute of Neuroscience, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK
| | - Peter Neal Taylor
- Institute of Neuroscience, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, UK; Interdisciplinary Computing and Complex BioSystems Group, School of Computing, Newcastle University, Newcastle upon Tyne, UK; Institute of Neurology, University College London, UK.
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39
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França LGS, Miranda JGV, Leite M, Sharma NK, Walker MC, Lemieux L, Wang Y. Fractal and Multifractal Properties of Electrographic Recordings of Human Brain Activity: Toward Its Use as a Signal Feature for Machine Learning in Clinical Applications. Front Physiol 2018; 9:1767. [PMID: 30618789 PMCID: PMC6295567 DOI: 10.3389/fphys.2018.01767] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2018] [Accepted: 11/22/2018] [Indexed: 01/08/2023] Open
Abstract
The quantification of brain dynamics is essential to its understanding. However, the brain is a system operating on multiple time scales, and characterization of dynamics across time scales remains a challenge. One framework to study such dynamics is that of fractal geometry; and currently there exist several methods for the study of brain dynamics using fractal geometry. We aim to highlight some of the practical challenges of applying fractal geometry to brain dynamics—and as a putative feature for machine learning applications, and propose solutions to enable its wider use in neuroscience. Using intracranially recorded electroencephalogram (EEG) and simulated data, we compared monofractal and multifractal methods with regards to their sensitivity to signal variance. We found that both monofractal and multifractal properties correlate closely with signal variance, thus not being a useful feature of the signal. However, after applying an epoch-wise standardization procedure to the signal, we found that multifractal measures could offer non-redundant information compared to signal variance, power (in different frequency bands) and other established EEG signal measures. We also compared different multifractal estimation methods to each other in terms of reliability, and we found that the Chhabra-Jensen algorithm performed best. Finally, we investigated the impact of sampling frequency and epoch length on the estimation of multifractal properties. Using epileptic seizures as an example event in the EEG, we show that there may be an optimal time scale (i.e., combination of sampling frequency and epoch length) for detecting temporal changes in multifractal properties around seizures. The practical issues we highlighted and our suggested solutions should help in developing robust methods for the application of fractal geometry in EEG signals. Our analyses and observations also aid the theoretical understanding of the multifractal properties of the brain and might provide grounds for new discoveries in the study of brain signals. These could be crucial for the understanding of neurological function and for the developments of new treatments.
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Affiliation(s)
- Lucas G Souza França
- Department of Clinical and Experimental Epilepsy, UCL Queen Square Institute of Neurology, University College London, London, United Kingdom
| | | | - Marco Leite
- Department of Clinical and Experimental Epilepsy, UCL Queen Square Institute of Neurology, University College London, London, United Kingdom
| | - Niraj K Sharma
- Department of Clinical and Experimental Epilepsy, UCL Queen Square Institute of Neurology, University College London, London, United Kingdom
| | - Matthew C Walker
- Department of Clinical and Experimental Epilepsy, UCL Queen Square Institute of Neurology, University College London, London, United Kingdom
| | - Louis Lemieux
- Department of Clinical and Experimental Epilepsy, UCL Queen Square Institute of Neurology, University College London, London, United Kingdom
| | - Yujiang Wang
- Department of Clinical and Experimental Epilepsy, UCL Queen Square Institute of Neurology, University College London, London, United Kingdom.,Interdisciplinary Computing and Complex BioSystems (ICOS) Research Group, School of Computing, Newcastle University, Newcastle upon Tyne, United Kingdom.,Institute of Neuroscience, Newcastle University, Newcastle upon Tyne, United Kingdom
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40
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Karoly PJ, Kuhlmann L, Soudry D, Grayden DB, Cook MJ, Freestone DR. Seizure pathways: A model-based investigation. PLoS Comput Biol 2018; 14:e1006403. [PMID: 30307937 PMCID: PMC6199000 DOI: 10.1371/journal.pcbi.1006403] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2018] [Revised: 10/23/2018] [Accepted: 07/26/2018] [Indexed: 02/06/2023] Open
Abstract
We present the results of a model inversion algorithm for electrocorticography (ECoG) data recorded during epileptic seizures. The states and parameters of neural mass models were tracked during a total of over 3000 seizures from twelve patients with focal epilepsy. These models provide an estimate of the effective connectivity within intracortical circuits over the time course of seizures. Observing the dynamics of effective connectivity provides insight into mechanisms of seizures. Estimation of patients seizure dynamics revealed: 1) a highly stereotyped pattern of evolution for each patient, 2) distinct sub-groups of onset mechanisms amongst patients, and 3) different offset mechanisms for long and short seizures. Stereotypical dynamics suggest that, once initiated, seizures follow a deterministic path through the parameter space of a neural model. Furthermore, distinct sub-populations of patients were identified based on characteristic motifs in the dynamics at seizure onset. There were also distinct patterns between long and short duration seizures that were related to seizure offset. Understanding how these different patterns of seizure evolution arise may provide new insights into brain function and guide treatment for epilepsy, since specific therapies may have preferential effects on the various parameters that could potentially be individualized. Methods that unite computational models with data provide a powerful means to generate testable hypotheses for further experimental research. This work provides a demonstration that the hidden connectivity parameters of a neural mass model can be dynamically inferred from data. Our results underscore the power of theoretical models to inform epilepsy management. It is our hope that this work guides further efforts to apply computational models to clinical data.
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Affiliation(s)
- Philippa J Karoly
- Department of Biomedical Engineering, The University of Melbourne, Parkville, Australia
- Department of Medicine, St Vincent's Hospital, The University of Melbourne, Fitzroy, Australia
| | - Levin Kuhlmann
- Brain Dynamics Lab, Swinburne University of Technology, Hawthorn, Australia
- Centre for Neural Engineering, The University of Melbourne, Parkville, Australia
| | - Daniel Soudry
- Department of Electrical Engineering, Technion, Haifa, Israel
| | - David B Grayden
- Department of Biomedical Engineering, The University of Melbourne, Parkville, Australia
- Centre for Neural Engineering, The University of Melbourne, Parkville, Australia
| | - Mark J Cook
- Department of Medicine, St Vincent's Hospital, The University of Melbourne, Fitzroy, Australia
| | - Dean R Freestone
- Department of Medicine, St Vincent's Hospital, The University of Melbourne, Fitzroy, Australia
- Seer Medical Pty, Melbourne, Australia
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41
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A Brain-Heart Biomarker for Epileptogenesis. J Neurosci 2018; 38:8473-8483. [PMID: 30150365 DOI: 10.1523/jneurosci.1130-18.2018] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2018] [Revised: 07/17/2018] [Accepted: 08/08/2018] [Indexed: 12/19/2022] Open
Abstract
Postinjury epilepsy is an potentially preventable sequela in as many as 20% of patients with brain insults. For these cases biomarkers of epileptogenesis are critical to facilitate identification of patients at high-risk of developing epilepsy and to introduce effective anti-epileptogenic interventions. Here, we demonstrate that delayed brain-heart coincidences serve as a reliable biomarker. In a murine model of post-infection acquired epilepsy, we used long-term simultaneous measurements of the brain activity via electroencephalography and autonomic cardiac activity via electrocardiography, in male mice, to quantitatively track brain-heart interactions during epileptogenesis. We find that abnormal cortical discharges precede abnormal fluctuations in the cardiac rhythm at the resolution of single beat-to-beat intervals. The delayed brain-heart coincidence is detectable as early as the onset of chronic measurements, 2-14 weeks before the first seizure, only in animals that become epileptic, and increases during epileptogenesis. Therefore, delayed brain-heart coincidence serves as a biomarker of epileptogenesis and could be used for phenotyping, diagnostic, and therapeutic purposes.SIGNIFICANCE STATEMENT No biomarker that readily predicts and tracks epileptogenesis currently exists for the wide range of human acquired epilepsies. Here, we used long-term measurements of brain and heart activity in a mouse model of post-infection acquired epilepsy to investigate the potential of brain-heart interaction as a biomarker of epileptogenesis. We found that delayed coincidences from brain to heart can clearly separate the mice that became epileptic from those that did not weeks before development of epilepsy. Our findings allow for phenotyping and tracking of epileptogenesis in this and likely other models of acquired epilepsy. Such capability is critical for efficient adjunctive treatment development and for tracking the efficacy of such treatments.
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42
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Lopes MA, Lee KE, Goltsev AV. Neuronal network model of interictal and recurrent ictal activity. Phys Rev E 2017; 96:062412. [PMID: 29347379 DOI: 10.1103/physreve.96.062412] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2017] [Indexed: 02/04/2023]
Abstract
We propose a neuronal network model which undergoes a saddle node on an invariant circle bifurcation as the mechanism of the transition from the interictal to the ictal (seizure) state. In the vicinity of this transition, the model captures important dynamical features of both interictal and ictal states. We study the nature of interictal spikes and early warnings of the transition predicted by this model. We further demonstrate that recurrent seizures emerge due to the interaction between two networks.
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Affiliation(s)
- M A Lopes
- Living Systems Institute, University of Exeter, Exeter EX4 4QD, United Kingdom.,Wellcome Trust Centre for Biomedical Modelling and Analysis, University of Exeter, Exeter EX4 4QD, United Kingdom.,EPSRC Centre for Predictive Modelling in Healthcare, University of Exeter, Exeter EX4 4QD, United Kingdom.,Department of Physics and I3N, University of Aveiro, 3810-193 Aveiro, Portugal
| | - K-E Lee
- Department of Physics and I3N, University of Aveiro, 3810-193 Aveiro, Portugal.,Department of Anesthesiology and Center for Consciousness Science, University of Michigan Medical School, Ann Arbor, Michigan 48109, USA
| | - A V Goltsev
- Department of Physics and I3N, University of Aveiro, 3810-193 Aveiro, Portugal.,A.F. Ioffe Physico-Technical Institue, 194021 St. Petersburg, Russia
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