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Jordan JA, Daniel E, Chen Y, Salowe RJ, Zhu Y, Miller-Ellis E, Addis V, Sankar PS, Zhu D, Smith EJ, Lee R, Ying GS, O’Brien JM. Features Associated with Visible Lamina Cribrosa Pores in Individuals of African Ancestry with Glaucoma: Primary Open-Angle African Ancestry Glaucoma Genetics (POAAGG) Study. Vision (Basel) 2024; 8:24. [PMID: 38651445 PMCID: PMC11036295 DOI: 10.3390/vision8020024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2024] [Revised: 04/15/2024] [Accepted: 04/15/2024] [Indexed: 04/25/2024] Open
Abstract
There are scarce data regarding the rate of the occurrence of primary open-angle glaucoma (POAG) and visible lamina cribrosa pores (LCPs) in the eyes of individuals with African ancestry; the potential impact of these features on disease burden remains unknown. We recruited subjects with POAG to the Primary Open-Angle African American Glaucoma Genetics (POAAGG) study. Through regression models, we evaluated the association between the presence of LCPs and various phenotypic features. In a multivariable analysis of 1187 glaucomatous eyes, LCPs were found to be more likely to be present in eyes with cup-to-disc ratios (CDR) of ≥0.9 (adjusted risk ratio (aRR) 1.11, 95%CI: 1.04-1.19, p = 0.005), eyes with cylindrical-shaped (aRR 1.22, 95%CI: 1.11-1.33) and bean pot (aRR 1.24, 95%CI: 1.13-1.36) cups versus conical cups (p < 0.0001), moderate cup depth (aRR 1.24, 95%CI: 1.06-1.46) and deep cups (aRR 1.27, 95%CI: 1.07-1.50) compared to shallow cups (p = 0.01), and the nasalization of central retinal vessels (aRR 1.33, 95%CI: 1.23-1.44), p < 0.0001). Eyes with LCPs were more likely to have a higher degree of African ancestry (q0), determined by means of SNP analysis (aRR 0.96, 95%CI: 0.93-0.99, p = 0.005 for per 0.1 increase in q0). Our large cohort of POAG cases of people with African ancestry showed that LCPs may be an important risk factor in identifying severe disease, potentially warranting closer monitoring by physicians.
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Affiliation(s)
| | | | | | | | | | | | | | | | | | | | | | | | - Joan M. O’Brien
- Department of Ophthalmology, University of Pennsylvania, Philadelphia, PA 19104, USA; (J.A.J.); (E.D.); (Y.C.); (R.J.S.); (Y.Z.); (E.M.-E.); (V.A.); (P.S.S.); (D.Z.); (E.J.S.); (R.L.); (G.-S.Y.)
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Thiéry AH, Braeu F, Tun TA, Aung T, Girard MJA. Medical Application of Geometric Deep Learning for the Diagnosis of Glaucoma. Transl Vis Sci Technol 2023; 12:23. [PMID: 36790820 PMCID: PMC9940771 DOI: 10.1167/tvst.12.2.23] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/16/2023] Open
Abstract
Purpose (1) To assess the performance of geometric deep learning in diagnosing glaucoma from a single optical coherence tomography (OCT) scan of the optic nerve head and (2) to compare its performance to that obtained with a three-dimensional (3D) convolutional neural network (CNN), and with a gold-standard parameter, namely, the retinal nerve fiber layer (RNFL) thickness. Methods Scans of the optic nerve head were acquired with OCT for 477 glaucoma and 2296 nonglaucoma subjects. All volumes were automatically segmented using deep learning to identify seven major neural and connective tissues. Each optic nerve head was then represented as a 3D point cloud with approximately 1000 points. Geometric deep learning (PointNet) was then used to provide a glaucoma diagnosis from a single 3D point cloud. The performance of our approach (reported using the area under the curve [AUC]) was compared with that obtained with a 3D CNN, and with the RNFL thickness. Results PointNet was able to provide a robust glaucoma diagnosis solely from a 3D point cloud (AUC = 0.95 ± 0.01).The performance of PointNet was superior to that obtained with a 3D CNN (AUC = 0.87 ± 0.02 [raw OCT images] and 0.91 ± 0.02 [segmented OCT images]) and with that obtained from RNFL thickness alone (AUC = 0.80 ± 0.03). Conclusions We provide a proof of principle for the application of geometric deep learning in glaucoma. Our technique requires significantly less information as input to perform better than a 3D CNN, and with an AUC superior to that obtained from RNFL thickness. Translational Relevance Geometric deep learning may help us to improve and simplify diagnosis and prognosis applications in glaucoma.
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Affiliation(s)
- Alexandre H. Thiéry
- Department of Statistics and Data Science, National University of Singapore, Singapore
| | - Fabian Braeu
- Ophthalmic Engineering & Innovation Laboratory, Singapore Eye Research Institute, Singapore National Eye Centre, Singapore,Yong Loo Lin School of Medicine, National University of Singapore, Singapore
| | - Tin A. Tun
- Singapore Eye Research Institute, Singapore National Eye Centre, Singapore,Duke-NUS Graduate Medical School, Singapore
| | - Tin Aung
- Singapore Eye Research Institute, Singapore National Eye Centre, Singapore,Duke-NUS Graduate Medical School, Singapore
| | - Michaël J. A. Girard
- Ophthalmic Engineering & Innovation Laboratory, Singapore Eye Research Institute, Singapore National Eye Centre, Singapore,Duke-NUS Graduate Medical School, Singapore,Institute for Molecular and Clinical Ophthalmology, Basel, Switzerland
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Morphological Changes of Glial Lamina Cribrosa of Rats Suffering from Chronic High Intraocular Pressure. BIOENGINEERING (BASEL, SWITZERLAND) 2022; 9:bioengineering9120741. [PMID: 36550947 PMCID: PMC9774533 DOI: 10.3390/bioengineering9120741] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/25/2022] [Revised: 11/13/2022] [Accepted: 11/27/2022] [Indexed: 12/05/2022]
Abstract
Deformations or remodeling of the lamina cribrosa (LC) induced by elevated intraocular pressure (IOP) are associated with optic nerve injury. The quantitative analysis of the morphology changes of the LC will provide the basis for the study of the pathogenesis of glaucoma. After the chronic high-IOP rat model was induced by cauterizing episcleral veins with 5-Fluorouracil subconjunctival injection, the optic nerve head (ONH) cross sections were immunohistochemically stained at 2 w, 4 w, 8 w, and 12 w. Then the sections were imaged by a confocal microscope, and six morphological parameters of the ONH were calculated after the images were processed using Matlab. The results showed that the morphology of the ONH changed with the duration of chronic high IOP. The glial LC pore area fraction, the ratio of glial LC pore area to the glial LC tissue area, first decreased at 2 w and 4 w and then increased to the same level as the control group at 8 w and continued to increase until 12 w. The number and density of nuclei increased significantly at 8 w in the glial LC region. The results might mean the fraction of glial LC beam increased and astrocytes proliferated at the early stage of high IOP. Combined with the images of the ONH, the results showed the glial LC was damaged with the duration of chronic elevated IOP.
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Ahmad H, Azri MFM, Ramli R, Samion MZ, Yusoff N, Lim KS. 2 μm passively mode-locked thulium-doped fiber lasers with Ta 2AlC-deposited tapered and side-polished fibers. Sci Rep 2021; 11:21278. [PMID: 34711908 PMCID: PMC8553755 DOI: 10.1038/s41598-021-99928-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2021] [Accepted: 10/05/2021] [Indexed: 11/30/2022] Open
Abstract
In this work, mode-locked thulium-doped fiber lasers operating in the 2 µm wavelength region were demonstrated using tantalum aluminum carbide (Ta2AlC)-based saturable absorbers (SAs) utilizing the evanescent wave interaction. The Ta2AlC MAX Phase was prepared by dissolving the Ta2AlC powder in isopropyl alcohol and then deposited onto three different evanescent field-based devices, which were the tapered fiber, side-polished fiber, and arc-shaped fiber. Flame-brushing and wheel-polishing techniques were used to fabricate the tapered and arc-shaped fibers, respectively, while the side-polished fiber was purchased commercially. All three SA devices generated stable mode-locked pulses at center wavelengths of 1937, 1931, and 1929 nm for the tapered, side-polished, and arc-shaped fibers. The frequency of the mode-locked pulses was 10.73 MHz for the tapered fiber, 9.58 MHz for the side-polished fiber, and 10.16 MHz for the arc-shaped fiber. The measured pulse widths were 1.678, 1.734, and 1.817 ps for each of the three SA devices. The long-term stability of the mode-locked lasers was tested for each configuration over a 2-h duration. The lasers also showed little to no fluctuations in the center wavelengths and the peak optical intensities, demonstrating a reliable, ultrafast laser system.
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Affiliation(s)
- H Ahmad
- Photonics Research Centre, Universiti Malaya, 50603, Kuala Lumpur, Malaysia.
- Department of Physics, Faculty of Science, Universiti Malaya, 50603, Kuala Lumpur, Malaysia.
| | - M F M Azri
- Photonics Research Centre, Universiti Malaya, 50603, Kuala Lumpur, Malaysia
| | - R Ramli
- Photonics Research Centre, Universiti Malaya, 50603, Kuala Lumpur, Malaysia
| | - M Z Samion
- Photonics Research Centre, Universiti Malaya, 50603, Kuala Lumpur, Malaysia
| | - N Yusoff
- Photonics Research Centre, Universiti Malaya, 50603, Kuala Lumpur, Malaysia
| | - K S Lim
- Photonics Research Centre, Universiti Malaya, 50603, Kuala Lumpur, Malaysia
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Schuster AK, Erb C, Hoffmann EM, Dietlein T, Pfeiffer N. The Diagnosis and Treatment of Glaucoma. DEUTSCHES ARZTEBLATT INTERNATIONAL 2020; 117:225-234. [PMID: 32343668 DOI: 10.3238/arztebl.2020.0225] [Citation(s) in RCA: 63] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2019] [Revised: 04/01/2019] [Accepted: 10/28/2019] [Indexed: 12/12/2022]
Abstract
BACKGROUND Glaucoma is a group of chronically progressive disorders of the optic nerve. In this article, we present the epidemiology of and risk factors for glaucoma, as well as the diagnostic work-up and treatment options. METHODS This review is based on pertinent publications retrieved by a selective search in Medline and the Cochrane Library, supplemented by further articles chosen by the authors. RESULTS In Europe, the prevalence of glaucoma is 2.93% among persons aged 40 to 80 years. The prevalence rises with age, reaching 10% in persons over 90 years old. The available diagnostic methods include ophthalmoscopy, tonometry, perimetry, and imaging techniques. The treatment of glaucoma is focused on lowering the intraocular pressure with topical drugs, laser therapy, and glaucoma surgery. In patients with manifest glaucoma, lowering the intraocular pressure prevents the progression of visual field defects, with a number needed to treat of 7. CONCLUSION The diagnostic evaluation of glaucoma rests on multiple pillars, all of which must be considered for establishing the diagnosis and defining the desired target pressure: these are, among others, the intraocular pressure and ocular function and morphology. Individually tailored pressure-lowering treatment should be evaluated in regularly scheduled follow-up visits for assessment of function and morphology and adjusted as necessary to minimize the risk of progression.
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Affiliation(s)
- Alexander K Schuster
- Department of Ophthalmology, University Medical Center Mainz; Private Institute of Applied Ophthalmology Berlin; Department of Ophthalmology, University Hospital Cologne
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Sarhan A, Rokne J, Alhajj R. Glaucoma detection using image processing techniques: A literature review. Comput Med Imaging Graph 2019; 78:101657. [PMID: 31675645 DOI: 10.1016/j.compmedimag.2019.101657] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2019] [Revised: 09/02/2019] [Accepted: 09/09/2019] [Indexed: 11/26/2022]
Abstract
The term glaucoma refers to a group of heterogeneous diseases that cause the degeneration of retinal ganglion cells (RGCs). The degeneration of RGCs leads to two main issues: (i) structural changes to the optic nerve head as well as the nerve fiber layer, and (ii) simultaneous functional failure of the visual field. These two effects of glaucoma may lead to peripheral vision loss and, if the condition is left to progress it may eventually lead to blindness. No cure for glaucoma exists apart from early detection and treatment by optometrists and ophthalmologists. The degeneration of RGCs is normally detected from retinal images which are assessed by an expert. These retinal images also provide other vital information about the health of an eye. Thus, it is essential to develop automated techniques for extracting this information. The rapid development of digital images and computer vision techniques have increased the potential for analysis of eye health from images. This paper surveys current approaches to detect glaucoma from 2D and 3D images; both the limitations and possible future directions are highlighted. This study also describes the datasets used for retinal analysis along with existing evaluation algorithms. The main topics covered by this study may be enumerated as follows.
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Affiliation(s)
- Abdullah Sarhan
- Department of Computer Science, University of Calgary, Calgary, AB, Canada.
| | - Jon Rokne
- Department of Computer Science, University of Calgary, Calgary, AB, Canada
| | - Reda Alhajj
- Department of Computer Science, University of Calgary, Calgary, AB, Canada; Department of Computer Engineering, Istanbul Medipol University, Istanbul, Turkey
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Omodaka K, Maekawa S, An G, Tsuda S, Shiga Y, Takada N, Kikawa T, Takahashi H, Yokota H, Akiba M, Nakazawa T. Pilot study for three-dimensional assessment of laminar pore structure in patients with glaucoma, as measured with swept source optical coherence tomography. PLoS One 2018; 13:e0207600. [PMID: 30462712 PMCID: PMC6248986 DOI: 10.1371/journal.pone.0207600] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2018] [Accepted: 10/26/2018] [Indexed: 11/18/2022] Open
Abstract
Purpose To develop a method to quantify, based on swept-source optical coherence tomography (OCT), the 3D structure of the laminar pores in patients with glaucoma. Methods This retrospective study examined 160 laminar pores from 8 eyes of 8 cases: 4 normal subjects and 4 open-angle glaucoma (OAG) patients. We reconstructed 3D volume data for a 3 x 3 mm disc, using a method similar to OCT angiography, and segmented the structure of the lamina cribrosa. Then, we manually segmented each laminar pore in sequential C-scan images (>90 slices at 2.6-micron intervals) with VCAT5 (RIKEN, Japan). We compared the control and OAG subjects with the Mann-Whitney U test. Differences were considered significant at p < 0.05. Results We found that the laminar pores of the OAG patients had a significantly smaller average cross-sectional area, smaller 3D volume (adjusted to the average thickness of the lamina cribrosa), and higher true sphericity, and lower principal value (P1, 2, 3) of the 3D structure data (all: p < 0.0001). The topographic distribution of damaged laminar pores was consistent with the damaged area of the macular map. Conclusion We successfully developed a method to quantify the 3D structure of the laminar pores; providing a useful tool to assess lamina cribrosa-associated risk factors for glaucoma. These findings promise to benefit future investigations into the pathomechanisms of glaucoma.
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Affiliation(s)
- Kazuko Omodaka
- Department of Ophthalmology, Graduate School of Medicine, Tohoku University Graduate School of Medicine, Sendai, Japan
- Department of Ophthalmic Imaging and Information Analytics, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Shigeto Maekawa
- Department of Ophthalmology, Graduate School of Medicine, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Guangzhou An
- R&D Division, TOPCON Corporation, Tokyo, Japan
- Cloud-Based Eye Disease Diagnosis Joint Research Team, RIKEN, Wako, Japan
| | - Satoru Tsuda
- Department of Ophthalmology, Graduate School of Medicine, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Yukihiro Shiga
- Department of Ophthalmology, Graduate School of Medicine, Tohoku University Graduate School of Medicine, Sendai, Japan
| | - Naoko Takada
- Department of Ophthalmology, Graduate School of Medicine, Tohoku University Graduate School of Medicine, Sendai, Japan
| | | | - Hidetoshi Takahashi
- Division of Ophthalmology, Tohoku Medical and Pharmaceutical University, Department of Medicine, Sendai, Japan
| | - Hideo Yokota
- Cloud-Based Eye Disease Diagnosis Joint Research Team, RIKEN, Wako, Japan
- Image Processing Research Team, RIKEN, Wako, Japan
| | - Masahiro Akiba
- R&D Division, TOPCON Corporation, Tokyo, Japan
- Cloud-Based Eye Disease Diagnosis Joint Research Team, RIKEN, Wako, Japan
| | - Toru Nakazawa
- Department of Ophthalmology, Graduate School of Medicine, Tohoku University Graduate School of Medicine, Sendai, Japan
- Department of Ophthalmic Imaging and Information Analytics, Tohoku University Graduate School of Medicine, Sendai, Japan
- Image Processing Research Team, RIKEN, Wako, Japan
- Department of Retinal Disease Control, Ophthalmology, Tohoku University Graduate School of Medicine, Sendai, Japan
- Department of Advanced Ophthalmic Medicine, Tohoku University Graduate School of Medicine, Sendai, Japan
- * E-mail:
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