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Combrisson E, Di Rienzo F, Saive AL, Perrone-Bertolotti M, Soto JLP, Kahane P, Lachaux JP, Guillot A, Jerbi K. Human local field potentials in motor and non-motor brain areas encode upcoming movement direction. Commun Biol 2024; 7:506. [PMID: 38678058 PMCID: PMC11055917 DOI: 10.1038/s42003-024-06151-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2023] [Accepted: 04/05/2024] [Indexed: 04/29/2024] Open
Abstract
Limb movement direction can be inferred from local field potentials in motor cortex during movement execution. Yet, it remains unclear to what extent intended hand movements can be predicted from brain activity recorded during movement planning. Here, we set out to probe the directional-tuning of oscillatory features during motor planning and execution, using a machine learning framework on multi-site local field potentials (LFPs) in humans. We recorded intracranial EEG data from implanted epilepsy patients as they performed a four-direction delayed center-out motor task. Fronto-parietal LFP low-frequency power predicted hand-movement direction during planning while execution was largely mediated by higher frequency power and low-frequency phase in motor areas. By contrast, Phase-Amplitude Coupling showed uniform modulations across directions. Finally, multivariate classification led to an increase in overall decoding accuracy (>80%). The novel insights revealed here extend our understanding of the role of neural oscillations in encoding motor plans.
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Affiliation(s)
- Etienne Combrisson
- Psychology Department, University of Montreal, Montreal, QC, Canada.
- University of Lyon, UCBL-Lyon 1, Laboratoire Interuniversitaire de Biologie de la Motricité UR 7424, F-69622, Villeurbanne, France.
- Institut de Neurosciences de la Timone, Aix Marseille Université, UMR 7289 CNRS, 13005, Marseille, France.
| | - Franck Di Rienzo
- University of Lyon, UCBL-Lyon 1, Laboratoire Interuniversitaire de Biologie de la Motricité UR 7424, F-69622, Villeurbanne, France
| | - Anne-Lise Saive
- Psychology Department, University of Montreal, Montreal, QC, Canada
- Cognitive Science Department, Lyfe Research and Innovation Center, Ecully, France
| | | | - Juan L P Soto
- Telecommunications and Control Engineering Department, University of Sao Paulo, Sao Paulo, Brazil
| | - Philippe Kahane
- Université Grenoble Alpes, Inserm, U1216, CHU Grenoble Alpes, Grenoble Institut Neurosciences, GIN, Grenoble, France
| | - Jean-Philippe Lachaux
- Lyon Neuroscience Research Center, EDUWELL team, INSERM UMRS 1028, CNRS UMR 5292, Université Claude Bernard Lyon 1, Université de Lyon, F-69000, Lyon, France
| | - Aymeric Guillot
- University of Lyon, UCBL-Lyon 1, Laboratoire Interuniversitaire de Biologie de la Motricité UR 7424, F-69622, Villeurbanne, France
| | - Karim Jerbi
- Psychology Department, University of Montreal, Montreal, QC, Canada.
- Mila (Quebec AI Institute), montreal, QC, Canada.
- UNIQUE Centre (Quebec Neuro-AI research Center), Montreal, QC, Canada.
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2
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Zhang R, Wang Z, Wu T, Cai Y, Tao L, Xiao ZC, Li Y. Learning spiking neuronal networks with artificial neural networks: neural oscillations. J Math Biol 2024; 88:65. [PMID: 38630136 DOI: 10.1007/s00285-024-02081-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2022] [Revised: 06/30/2023] [Accepted: 03/05/2024] [Indexed: 04/19/2024]
Abstract
First-principles-based modelings have been extremely successful in providing crucial insights and predictions for complex biological functions and phenomena. However, they can be hard to build and expensive to simulate for complex living systems. On the other hand, modern data-driven methods thrive at modeling many types of high-dimensional and noisy data. Still, the training and interpretation of these data-driven models remain challenging. Here, we combine the two types of methods to model stochastic neuronal network oscillations. Specifically, we develop a class of artificial neural networks to provide faithful surrogates to the high-dimensional, nonlinear oscillatory dynamics produced by a spiking neuronal network model. Furthermore, when the training data set is enlarged within a range of parameter choices, the artificial neural networks become generalizable to these parameters, covering cases in distinctly different dynamical regimes. In all, our work opens a new avenue for modeling complex neuronal network dynamics with artificial neural networks.
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Affiliation(s)
- Ruilin Zhang
- Center for Bioinformatics, National Laboratory of Protein Engineering and Plant Genetic Engineering, School of Life Sciences, Peking University, Beijing, 100871, China
- Yuanpei College, Peking University, 100871, Beijing, China
| | - Zhongyi Wang
- Center for Bioinformatics, National Laboratory of Protein Engineering and Plant Genetic Engineering, School of Life Sciences, Peking University, Beijing, 100871, China
- School of Mathematical Sciences, Peking University, 100871, Beijing, China
| | - Tianyi Wu
- Center for Bioinformatics, National Laboratory of Protein Engineering and Plant Genetic Engineering, School of Life Sciences, Peking University, Beijing, 100871, China
- School of Mathematical Sciences, Peking University, 100871, Beijing, China
| | - Yuhang Cai
- Department of Mathematics, University of California, 94720, Berkeley, CA, USA
| | - Louis Tao
- Center for Bioinformatics, National Laboratory of Protein Engineering and Plant Genetic Engineering, School of Life Sciences, Peking University, Beijing, 100871, China.
- Center for Quantitative Biology, Peking University, 100871, Beijing, China.
| | - Zhuo-Cheng Xiao
- Courant Institute of Mathematical Sciences, New York University, 10003, New York, NY, USA.
| | - Yao Li
- Department of Mathematics and Statistics, University of Massachusetts Amherst, 01003, Amherst, MA, USA.
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3
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Klein A, Aeschlimann SA, Zubler F, Scutelnic A, Riederer F, Ertl M, Schankin CJ. Alterations of the alpha rhythm in visual snow syndrome: a case-control study. J Headache Pain 2024; 25:53. [PMID: 38584260 PMCID: PMC11000394 DOI: 10.1186/s10194-024-01754-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2024] [Accepted: 03/19/2024] [Indexed: 04/09/2024] Open
Abstract
BACKGROUND Visual snow syndrome is a disorder characterized by the combination of typical perceptual disturbances. The clinical picture suggests an impairment of visual filtering mechanisms and might involve primary and secondary visual brain areas, as well as higher-order attentional networks. On the level of cortical oscillations, the alpha rhythm is a prominent EEG pattern that is involved in the prioritisation of visual information. It can be regarded as a correlate of inhibitory modulation within the visual network. METHODS Twenty-one patients with visual snow syndrome were compared to 21 controls matched for age, sex, and migraine. We analysed the resting-state alpha rhythm by identifying the individual alpha peak frequency using a Fast Fourier Transform and then calculating the power spectral density around the individual alpha peak (+/- 1 Hz). We anticipated a reduced power spectral density in the alpha band over the primary visual cortex in participants with visual snow syndrome. RESULTS There were no significant differences in the power spectral density in the alpha band over the occipital electrodes (O1 and O2), leading to the rejection of our primary hypothesis. However, the power spectral density in the alpha band was significantly reduced over temporal and parietal electrodes. There was also a trend towards increased individual alpha peak frequency in the subgroup of participants without comorbid migraine. CONCLUSIONS Our main finding was a decreased power spectral density in the alpha band over parietal and temporal brain regions corresponding to areas of the secondary visual cortex. These findings complement previous functional and structural imaging data at a electrophysiological level. They underscore the involvement of higher-order visual brain areas, and potentially reflect a disturbance in inhibitory top-down modulation. The alpha rhythm alterations might represent a novel target for specific neuromodulation. TRIAL REGISTRATION we preregistered the study before preprocessing and data analysis on the platform osf.org (DOI: https://doi.org/10.17605/OSF.IO/XPQHF , date of registration: November 19th 2022).
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Affiliation(s)
- Antonia Klein
- Department of Neurology Inselspital, Bern University Hospital, University of Bern, Rosenbühlgasse 25, Bern, CH-3010, Switzerland
| | - Sarah A Aeschlimann
- Department of Neurology Inselspital, Bern University Hospital, University of Bern, Rosenbühlgasse 25, Bern, CH-3010, Switzerland
| | - Frederic Zubler
- Department of Neurology Inselspital, Bern University Hospital, University of Bern, Rosenbühlgasse 25, Bern, CH-3010, Switzerland
| | - Adrian Scutelnic
- Department of Neurology Inselspital, Bern University Hospital, University of Bern, Rosenbühlgasse 25, Bern, CH-3010, Switzerland
| | - Franz Riederer
- Department of Neurology Inselspital, Bern University Hospital, University of Bern, Rosenbühlgasse 25, Bern, CH-3010, Switzerland
| | - Matthias Ertl
- Department of Psychology, University of Bern, Bern, CH 3010, Switzerland
- Neurocenter, Luzerner Kantonsspital, Lucerne, 6000, Switzerland
| | - Christoph J Schankin
- Department of Neurology Inselspital, Bern University Hospital, University of Bern, Rosenbühlgasse 25, Bern, CH-3010, Switzerland.
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4
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Rimehaug AE, Dale AM, Arkhipov A, Einevoll GT. Uncovering population contributions to the extracellular potential in the mouse visual system using Laminar Population Analysis. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.01.15.575805. [PMID: 38293236 PMCID: PMC10827114 DOI: 10.1101/2024.01.15.575805] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2024]
Abstract
The local field potential (LFP), the low-frequency part of the extracellular potential, reflects transmembrane currents in the vicinity of the recording electrode. Thought mainly to stem from currents caused by synaptic input, it provides information about neural activity complementary to that of spikes, the output of neurons. However, the many neural sources contributing to the LFP, and likewise the derived current source density (CSD), can often make it challenging to interpret. Efforts to improve its interpretability have included the application of statistical decomposition tools like principal component analysis (PCA) and independent component analysis (ICA) to disentangle the contributions from different neural sources. However, their underlying assumptions of, respectively, orthogonality and statistical independence are not always valid for the various processes or pathways generating LFP. Here, we expand upon and validate a decomposition algorithm named Laminar Population Analysis (LPA), which is based on physiological rather than statistical assumptions. LPA utilizes the multiunit activity (MUA) and LFP jointly to uncover the contributions of different populations to the LFP. To perform the validation of LPA, we used data simulated with the large-scale, biophysically detailed model of mouse V1 developed by the Allen Institute. We find that LPA can identify laminar positions within V1 and the temporal profiles of laminar population firing rates from the MUA. We also find that LPA can estimate the salient current sinks and sources generated by feedforward input from the lateral geniculate nucleus (LGN), recurrent activity in V1, and feedback input from the lateromedial (LM) area of visual cortex. LPA identifies and distinguishes these contributions with a greater accuracy than the alternative statistical decomposition methods, PCA and ICA. Lastly, we also demonstrate the application of LPA on experimentally recorded MUA and LFP from 24 animals in the publicly available Visual Coding dataset. Our results suggest that LPA can be used both as a method to estimate positions of laminar populations and to uncover salient features in LFP/CSD contributions from different populations.
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Affiliation(s)
| | - Anders M. Dale
- Department of Neuroscience, University of California San Diego, San Diego, California, USA
| | | | - Gaute T. Einevoll
- Department of Physics, Norwegian University of Life Sciences, Ås, Norway
- Department of Physics, University of Oslo, Oslo, Norway
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5
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Shih WY, Yu HY, Lee CC, Chou CC, Chen C, Glimcher PW, Wu SW. Electrophysiological population dynamics reveal context dependencies during decision making in human frontal cortex. Nat Commun 2023; 14:7821. [PMID: 38016973 PMCID: PMC10684521 DOI: 10.1038/s41467-023-42092-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2022] [Accepted: 09/28/2023] [Indexed: 11/30/2023] Open
Abstract
Evidence from monkeys and humans suggests that the orbitofrontal cortex (OFC) encodes the subjective value of options under consideration during choice. Data from non-human primates suggests that these value signals are context-dependent, representing subjective value in a way influenced by the decision makers' recent experience. Using electrodes distributed throughout cortical and subcortical structures, human epilepsy patients performed an auction task where they repeatedly reported the subjective values they placed on snack food items. High-gamma activity in many cortical and subcortical sites including the OFC positively correlated with subjective value. Other OFC sites showed signals contextually modulated by the subjective value of previously offered goods-a context dependency predicted by theory but not previously observed in humans. These results suggest that value and value-context signals are simultaneously present but separately represented in human frontal cortical activity.
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Affiliation(s)
- Wan-Yu Shih
- Institute of Neuroscience, College of Life Sciences, National Yang Ming Chiao Tung University, Taipei, Taiwan, ROC.
| | - Hsiang-Yu Yu
- College of Medicine, National Yang Ming Chiao Tung University, Taipei, Taiwan, ROC
- Department of Epilepsy, Neurological Institute, Taipei Veterans General Hospital, Taipei, Taiwan, ROC
- Brain Research Center, National Yang Ming Chiao Tung University, Taipei, Taiwan, ROC
| | - Cheng-Chia Lee
- Department of Epilepsy, Neurological Institute, Taipei Veterans General Hospital, Taipei, Taiwan, ROC
- Brain Research Center, National Yang Ming Chiao Tung University, Taipei, Taiwan, ROC
- Department of Neurosurgery, Neurological Institute, Taipei Veterans General Hospital, Taipei, Taiwan, ROC
| | - Chien-Chen Chou
- College of Medicine, National Yang Ming Chiao Tung University, Taipei, Taiwan, ROC
- Department of Epilepsy, Neurological Institute, Taipei Veterans General Hospital, Taipei, Taiwan, ROC
- Brain Research Center, National Yang Ming Chiao Tung University, Taipei, Taiwan, ROC
| | - Chien Chen
- College of Medicine, National Yang Ming Chiao Tung University, Taipei, Taiwan, ROC
- Department of Epilepsy, Neurological Institute, Taipei Veterans General Hospital, Taipei, Taiwan, ROC
- Brain Research Center, National Yang Ming Chiao Tung University, Taipei, Taiwan, ROC
| | - Paul W Glimcher
- Neuroscience Institute, NYU Grossman School of Medicine, New York, NY, USA.
- Department of Neuroscience and Physiology, NYU Grossman School of Medicine, New York, NY, USA.
| | - Shih-Wei Wu
- Institute of Neuroscience, College of Life Sciences, National Yang Ming Chiao Tung University, Taipei, Taiwan, ROC.
- Brain Research Center, National Yang Ming Chiao Tung University, Taipei, Taiwan, ROC.
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6
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Zhao S, Zhou J, Zhang Y, Wang DH. γ And β Band Oscillation in Working Memory Given Sequential or Concurrent Multiple Items: A Spiking Network Model. eNeuro 2023; 10:ENEURO.0373-22.2023. [PMID: 37903618 PMCID: PMC10630927 DOI: 10.1523/eneuro.0373-22.2023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Revised: 10/10/2023] [Accepted: 10/22/2023] [Indexed: 11/01/2023] Open
Abstract
Working memory (WM) can maintain sequential and concurrent information, and the load enhances the γ band oscillation during the delay period. To provide a unified account for these phenomena in working memory, we investigated a continuous network model consisting of pyramidal cells, high-threshold fast-spiking interneurons (FS), and low-threshold nonfast-spiking interneurons (nFS) for working memory of sequential and concurrent directional cues. Our model exhibits the γ (30-100 Hz) and β (10-30 Hz) band oscillation during the retention of both concurrent cues and sequential cues. We found that the β oscillation results from the interaction between pyramidal cells and nFS, whereas the γ oscillation emerges from the interaction between pyramidal cells and FS because of the strong excitation elicited by cue presentation, shedding light on the mechanism underlying the enhancement of γ power in many cognitive executions.
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Affiliation(s)
- Shukuo Zhao
- School of Systems Science, Beijing Normal University, Beijing 100875, China
| | - Jinpu Zhou
- School of Systems Science, Beijing Normal University, Beijing 100875, China
| | - Yongwen Zhang
- School of Systems Science, Beijing Normal University, Beijing 100875, China
| | - Da-Hui Wang
- School of Systems Science, Beijing Normal University, Beijing 100875, China
- State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University, Beijing 100875, China
- Beijing Key Laboratory of Brain Imaging and Connectomics, Beijing Normal University, Beijing 100875, China
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7
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Rimehaug AE, Stasik AJ, Hagen E, Billeh YN, Siegle JH, Dai K, Olsen SR, Koch C, Einevoll GT, Arkhipov A. Uncovering circuit mechanisms of current sinks and sources with biophysical simulations of primary visual cortex. eLife 2023; 12:e87169. [PMID: 37486105 PMCID: PMC10393295 DOI: 10.7554/elife.87169] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Accepted: 07/10/2023] [Indexed: 07/25/2023] Open
Abstract
Local field potential (LFP) recordings reflect the dynamics of the current source density (CSD) in brain tissue. The synaptic, cellular, and circuit contributions to current sinks and sources are ill-understood. We investigated these in mouse primary visual cortex using public Neuropixels recordings and a detailed circuit model based on simulating the Hodgkin-Huxley dynamics of >50,000 neurons belonging to 17 cell types. The model simultaneously captured spiking and CSD responses and demonstrated a two-way dissociation: firing rates are altered with minor effects on the CSD pattern by adjusting synaptic weights, and CSD is altered with minor effects on firing rates by adjusting synaptic placement on the dendrites. We describe how thalamocortical inputs and recurrent connections sculpt specific sinks and sources early in the visual response, whereas cortical feedback crucially alters them in later stages. These results establish quantitative links between macroscopic brain measurements (LFP/CSD) and microscopic biophysics-based understanding of neuron dynamics and show that CSD analysis provides powerful constraints for modeling beyond those from considering spikes.
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Affiliation(s)
| | | | - Espen Hagen
- Department of Physics, University of OsloOsloNorway
- Department of Data Science, Norwegian University of Life SciencesÅsNorway
| | | | - Josh H Siegle
- MindScope Program, Allen InstituteSeattleUnited States
| | - Kael Dai
- MindScope Program, Allen InstituteSeattleUnited States
| | - Shawn R Olsen
- MindScope Program, Allen InstituteSeattleUnited States
| | - Christof Koch
- MindScope Program, Allen InstituteSeattleUnited States
| | - Gaute T Einevoll
- Department of Physics, University of OsloOsloNorway
- Department of Physics, Norwegian University of Life SciencesÅsNorway
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8
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Noguchi A, Yamashiro K, Matsumoto N, Ikegaya Y. Theta oscillations represent collective dynamics of multineuronal membrane potentials of murine hippocampal pyramidal cells. Commun Biol 2023; 6:398. [PMID: 37045975 PMCID: PMC10097823 DOI: 10.1038/s42003-023-04719-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2022] [Accepted: 03/16/2023] [Indexed: 04/14/2023] Open
Abstract
Theta (θ) oscillations are one of the characteristic local field potentials (LFPs) in the hippocampus that emerge during spatial navigation, exploratory sniffing, and rapid eye movement sleep. LFPs are thought to summarize multineuronal events, including synaptic currents and action potentials. However, no in vivo study to date has directly interrelated θ oscillations with the membrane potentials (Vm) of multiple neurons, and it remains unclear whether LFPs can be predicted from multineuronal Vms. Here, we simultaneously patch-clamp up to three CA1 pyramidal neurons in awake or anesthetized mice and find that the temporal evolution of the power and frequency of θ oscillations in Vms (θVms) are weakly but significantly correlate with LFP θ oscillations (θLFP) such that a deep neural network could predict the θLFP waveforms based on the θVm traces of three neurons. Therefore, individual neurons are loosely interdependent to ensure freedom of activity, but they partially share information to collectively produce θLFP.
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Affiliation(s)
- Asako Noguchi
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, Tokyo, 113-0033, Japan.
| | - Kotaro Yamashiro
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, Tokyo, 113-0033, Japan
| | - Nobuyoshi Matsumoto
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, Tokyo, 113-0033, Japan
- Institute for AI and Beyond, The University of Tokyo, Tokyo, 113-0033, Japan
| | - Yuji Ikegaya
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, Tokyo, 113-0033, Japan
- Institute for AI and Beyond, The University of Tokyo, Tokyo, 113-0033, Japan
- Center for Information and Neural Networks, National Institute of Information and Communications Technology, Suita City, Osaka, 565-0871, Japan
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9
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Wu T, Cai Y, Zhang R, Wang Z, Tao L, Xiao ZC. Multi-band oscillations emerge from a simple spiking network. CHAOS (WOODBURY, N.Y.) 2023; 33:043121. [PMID: 37097932 DOI: 10.1063/5.0106884] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2022] [Accepted: 03/14/2023] [Indexed: 06/19/2023]
Abstract
In the brain, coherent neuronal activities often appear simultaneously in multiple frequency bands, e.g., as combinations of alpha (8-12 Hz), beta (12.5-30 Hz), and gamma (30-120 Hz) oscillations, among others. These rhythms are believed to underlie information processing and cognitive functions and have been subjected to intense experimental and theoretical scrutiny. Computational modeling has provided a framework for the emergence of network-level oscillatory behavior from the interaction of spiking neurons. However, due to the strong nonlinear interactions between highly recurrent spiking populations, the interplay between cortical rhythms in multiple frequency bands has rarely been theoretically investigated. Many studies invoke multiple physiological timescales (e.g., various ion channels or multiple types of inhibitory neurons) or oscillatory inputs to produce rhythms in multi-bands. Here, we demonstrate the emergence of multi-band oscillations in a simple network consisting of one excitatory and one inhibitory neuronal population driven by constant input. First, we construct a data-driven, Poincaré section theory for robust numerical observations of single-frequency oscillations bifurcating into multiple bands. Then, we develop model reductions of the stochastic, nonlinear, high-dimensional neuronal network to capture the appearance of multi-band dynamics and the underlying bifurcations theoretically. Furthermore, when viewed within the reduced state space, our analysis reveals conserved geometrical features of the bifurcations on low-dimensional dynamical manifolds. These results suggest a simple geometric mechanism behind the emergence of multi-band oscillations without appealing to oscillatory inputs or multiple synaptic or neuronal timescales. Thus, our work points to unexplored regimes of stochastic competition between excitation and inhibition behind the generation of dynamic, patterned neuronal activities.
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Affiliation(s)
- Tianyi Wu
- School of Mathematical Sciences, Peking University, Beijing 100871, China
- Center for Bioinformatics, National Laboratory of Protein Engineering and Plant Genetic Engineering, School of Life Sciences, Peking University, Beijing 100871, China
- Courant Institute of Mathematical Sciences, New York University, New York, New York 10003, USA
| | - Yuhang Cai
- Department of Mathematics, University of California, Berkeley, Berkeley, California 94720, USA
| | - Ruilin Zhang
- Center for Bioinformatics, National Laboratory of Protein Engineering and Plant Genetic Engineering, School of Life Sciences, Peking University, Beijing 100871, China
- Yuanpei College, Peking University, Beijing 100871, China
| | - Zhongyi Wang
- School of Mathematical Sciences, Peking University, Beijing 100871, China
- Center for Bioinformatics, National Laboratory of Protein Engineering and Plant Genetic Engineering, School of Life Sciences, Peking University, Beijing 100871, China
| | - Louis Tao
- Center for Bioinformatics, National Laboratory of Protein Engineering and Plant Genetic Engineering, School of Life Sciences, Peking University, Beijing 100871, China
- Center for Quantitative Biology, Peking University, Beijing 100871, China
| | - Zhuo-Cheng Xiao
- Courant Institute of Mathematical Sciences, New York University, New York, New York 10003, USA
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10
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Pinheiro-Chagas P, Chen F, Sabetfakhri N, Perry C, Parvizi J. Direct intracranial recordings in the human angular gyrus during arithmetic processing. Brain Struct Funct 2023; 228:305-319. [PMID: 35907987 DOI: 10.1007/s00429-022-02540-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Accepted: 07/12/2022] [Indexed: 01/07/2023]
Abstract
The role of angular gyrus (AG) in arithmetic processing remains a subject of debate. In the present study, we recorded from the AG, supramarginal gyrus (SMG), intraparietal sulcus (IPS), and superior parietal lobule (SPL) across 467 sites in 30 subjects performing addition or multiplication with digits or number words. We measured the power of high-frequency-broadband (HFB) signal, a surrogate marker for regional cortical engagement, and used single-subject anatomical boundaries to define the location of each recording site. Our recordings revealed the lowest proportion of sites with activation or deactivation within the AG compared to other subregions of the inferior parietal cortex during arithmetic processing. The few activated AG sites were mostly located at the border zones between AG and IPS, or AG and SMG. Additionally, we found that AG sites were more deactivated in trials with fast compared to slow response times. The increase or decrease of HFB within specific AG sites was the same when arithmetic trials were presented with number words versus digits and during multiplication as well as addition trials. Based on our findings, we conclude that the prior neuroimaging findings of so-called activations in the AG during arithmetic processing could have been due to group-based analyses that might have blurred the individual anatomical boundaries of AG or the subtractive nature of the neuroimaging methods in which lesser deactivations compared to the control condition have been interpreted as "activations". Our findings offer a new perspective with electrophysiological data about the engagement of AG during arithmetic processing.
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Affiliation(s)
- Pedro Pinheiro-Chagas
- Laboratory of Behavioral and Cognitive Neuroscience, Stanford Human Intracranial Cognitive Electrophysiology Program, Department of Neurology and Neurological Science, Stanford University, Stanford, CA, 94305, USA
| | - Fengyixuan Chen
- Laboratory of Behavioral and Cognitive Neuroscience, Stanford Human Intracranial Cognitive Electrophysiology Program, Department of Neurology and Neurological Science, Stanford University, Stanford, CA, 94305, USA
| | - Niki Sabetfakhri
- Laboratory of Behavioral and Cognitive Neuroscience, Stanford Human Intracranial Cognitive Electrophysiology Program, Department of Neurology and Neurological Science, Stanford University, Stanford, CA, 94305, USA
| | - Claire Perry
- Laboratory of Behavioral and Cognitive Neuroscience, Stanford Human Intracranial Cognitive Electrophysiology Program, Department of Neurology and Neurological Science, Stanford University, Stanford, CA, 94305, USA
| | - Josef Parvizi
- Laboratory of Behavioral and Cognitive Neuroscience, Stanford Human Intracranial Cognitive Electrophysiology Program, Department of Neurology and Neurological Science, Stanford University, Stanford, CA, 94305, USA.
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11
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Wu R, Yang PF, Wang F, Liu Q, Gore JC, Chen LM. Differential Recovery of Submodality Touch Neurons and Interareal Communication in Sensory Input-Deprived Area 3b and S2 Cortices. J Neurosci 2022; 42:9330-9342. [PMID: 36379707 PMCID: PMC9794378 DOI: 10.1523/jneurosci.0034-22.2022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2021] [Revised: 08/09/2022] [Accepted: 10/14/2022] [Indexed: 11/17/2022] Open
Abstract
Cortical reactivation and regain of interareal functional connections have been linked to the recovery of hand grasping behavior after loss of sensory inputs in primates. We investigated contributions of neurons in two hierarchically organized somatosensory areas, 3b and S2, by characterizing local field potential (LFP) and multiunit spiking activity in five states (rest, stimulus-on, sustained, stimulus-off, and induced) and interareal communication after grasping behavior of dorsal column lesioned male squirrel monkeys had mostly recovered. Compared with normal cortex, fMRI, LFP, and spiking response magnitudes to step indentations were significantly weaker. The sustained component of the spiking recovered much better than the stimulus-off response. Correlation between overall spiking and γ LFP remained strong within each recovered areas 3b and S2. The interareal correlations of γ LFP were severely disrupted, except in the resting and stimulus-on periods. Interareal correlation of spiking was disrupted in the stimulus-off period only. In summary, submodality of low threshold mechanoreceptive neurons recovered differentially in input-deprived area 3b and S2 when impaired global hand grasping behavior returned. Slow-adapting-like neurons recovered, whereas rapid-adapting-like neurons did not. Interareal communications were also severely compromised. We propose that slow-adapting-like neurons and afferents in recovered area 3b and S2 mediate recovery of impaired grasping behavior after dorsal column tract lesion.SIGNIFICANCE STATEMENT Sensory feedback is essential for execution of hand grasping behavior in primates. Reactivations of somatosensory cortices have been attributed to recovery of such behavior after loss of sensory inputs via largely unknown mechanisms. In input-deprived area 3b and S2 cortex, after hand grasping behavior mostly recovered, we found slow-adapting-like neurons were greatly recovered, whereas rapid-adapting-like neurons did not. Communications between area 3b and S2 neurons were severely compromised. We suggest that recovery of slow-adapting-like neurons in input-deprived area 3b and S2 may mediate the recovery of hand grasping behavior.
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Affiliation(s)
- Ruiqi Wu
- Vanderbilt University Institute of Imaging Science, Vanderbilt University, Nashville, Tennessee 37232
- Department of Radiology and Radiological Sciences, Vanderbilt University Medical Center, Nashville, Tennessee 37232
- State Key Laboratory of Medical Neurobiology and MOE Frontiers Center for Brain Science, Institutes of Brain Science, Fudan University, Shanghai, 200032, China
- Shanghai Center for Brain Science and Brain-Inspired Technology, Shanghai, 200031, China
| | - Pai-Feng Yang
- Vanderbilt University Institute of Imaging Science, Vanderbilt University, Nashville, Tennessee 37232
- Department of Radiology and Radiological Sciences, Vanderbilt University Medical Center, Nashville, Tennessee 37232
| | - Feng Wang
- Vanderbilt University Institute of Imaging Science, Vanderbilt University, Nashville, Tennessee 37232
- Department of Radiology and Radiological Sciences, Vanderbilt University Medical Center, Nashville, Tennessee 37232
| | - Qing Liu
- Vanderbilt University Institute of Imaging Science, Vanderbilt University, Nashville, Tennessee 37232
- Department of Radiology and Radiological Sciences, Vanderbilt University Medical Center, Nashville, Tennessee 37232
| | - John C Gore
- Vanderbilt University Institute of Imaging Science, Vanderbilt University, Nashville, Tennessee 37232
- Department of Radiology and Radiological Sciences, Vanderbilt University Medical Center, Nashville, Tennessee 37232
- Department of Biomedical Engineer, Vanderbilt University, Nashville, Tennessee 37232
| | - Li Min Chen
- Vanderbilt University Institute of Imaging Science, Vanderbilt University, Nashville, Tennessee 37232
- Department of Radiology and Radiological Sciences, Vanderbilt University Medical Center, Nashville, Tennessee 37232
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12
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Fan X, Guo Q, Zhang X, Fei L, He S, Weng X. Top-down modulation and cortical-AMG/HPC interaction in familiar face processing. Cereb Cortex 2022; 33:4677-4687. [PMID: 36156127 DOI: 10.1093/cercor/bhac371] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2022] [Revised: 08/24/2022] [Accepted: 08/25/2022] [Indexed: 11/13/2022] Open
Abstract
Humans can accurately recognize familiar faces in only a few hundred milliseconds, but the underlying neural mechanism remains unclear. Here, we recorded intracranial electrophysiological signals from ventral temporal cortex (VTC), superior/middle temporal cortex (STC/MTC), medial parietal cortex (MPC), and amygdala/hippocampus (AMG/HPC) in 20 epilepsy patients while they viewed faces of famous people and strangers as well as common objects. In posterior VTC and MPC, familiarity-sensitive responses emerged significantly later than initial face-selective responses, suggesting that familiarity enhances face representations after they are first being extracted. Moreover, viewing famous faces increased the coupling between cortical areas and AMG/HPC in multiple frequency bands. These findings advance our understanding of the neural basis of familiar face perception by identifying the top-down modulation in local face-selective response and interactions between cortical face areas and AMG/HPC.
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Affiliation(s)
- Xiaoxu Fan
- Department of Psychology, University of Washington, Seattle, WA, 98105, United States
| | - Qiang Guo
- Epilepsy Center, Guangdong Sanjiu Brain Hospital, Guangzhou, Guangdong, 510510, China
| | - Xinxin Zhang
- Key Laboratory of Brain, Cognition and Education Sciences (South China Normal University), Ministry of Education,Guangzhou, Guangdong, 510898, China
| | - Lingxia Fei
- Epilepsy Center, Guangdong Sanjiu Brain Hospital, Guangzhou, Guangdong, 510510, China
| | - Sheng He
- State Key Laboratory of Brain and Cognitive Science, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China
| | - Xuchu Weng
- Key Laboratory of Brain, Cognition and Education Sciences (South China Normal University), Ministry of Education,Guangzhou, Guangdong, 510898, China
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13
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Herreras O, Torres D, Martín-Vázquez G, Hernández-Recio S, López-Madrona VJ, Benito N, Makarov VA, Makarova J. Site-dependent shaping of field potential waveforms. Cereb Cortex 2022; 33:3636-3650. [PMID: 35972425 PMCID: PMC10068269 DOI: 10.1093/cercor/bhac297] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2022] [Revised: 07/07/2022] [Accepted: 07/08/2022] [Indexed: 11/13/2022] Open
Abstract
The activity of neuron populations gives rise to field potentials (FPs) that extend beyond the sources. Their mixing in the volume dilutes the original temporal motifs in a site-dependent manner, a fact that has received little attention. And yet, it potentially rids of physiological significance the time-frequency parameters of individual waves (amplitude, phase, duration). This is most likely to happen when a single source or a local origin is erroneously assumed. Recent studies using spatial treatment of these signals and anatomically realistic modeling of neuron aggregates provide convincing evidence for the multisource origin and site-dependent blend of FPs. Thus, FPs generated in primary structures like the neocortex and hippocampus reach far and cross-contaminate each other but also, they add and even impose their temporal traits on distant regions. Furthermore, both structures house neurons that act as spatially distinct (but overlapped) FP sources whose activation is state, region, and time dependent, making the composition of so-called local FPs highly volatile and strongly site dependent. Since the spatial reach cannot be predicted without source geometry, it is important to assess whether waveforms and temporal motifs arise from a single source; otherwise, those from each of the co-active sources should be sought.
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Affiliation(s)
- Oscar Herreras
- Department of Translational Neuroscience, Cajal Institute, CSIC, Av. Doctor Arce 37, Madrid 28002, Spain
| | - Daniel Torres
- Department of Translational Neuroscience, Cajal Institute, CSIC, Av. Doctor Arce 37, Madrid 28002, Spain
| | - Gonzalo Martín-Vázquez
- Department of Translational Neuroscience, Cajal Institute, CSIC, Av. Doctor Arce 37, Madrid 28002, Spain
| | - Sara Hernández-Recio
- Department of Translational Neuroscience, Cajal Institute, CSIC, Av. Doctor Arce 37, Madrid 28002, Spain
| | - Víctor J López-Madrona
- Department of Translational Neuroscience, Cajal Institute, CSIC, Av. Doctor Arce 37, Madrid 28002, Spain
| | - Nuria Benito
- Department of Translational Neuroscience, Cajal Institute, CSIC, Av. Doctor Arce 37, Madrid 28002, Spain
| | - Valeri A Makarov
- Department of Applied Mathematics, Institute for Interdisciplinary Mathematics, Universidad Complutense of Madrid, Av. Paraninfo s/n, Madrid 28040, Spain
| | - Julia Makarova
- Department of Translational Neuroscience, Cajal Institute, CSIC, Av. Doctor Arce 37, Madrid 28002, Spain.,Department of Applied Mathematics, Institute for Interdisciplinary Mathematics, Universidad Complutense of Madrid, Av. Paraninfo s/n, Madrid 28040, Spain
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14
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Gallego-Carracedo C, Perich MG, Chowdhury RH, Miller LE, Gallego JÁ. Local field potentials reflect cortical population dynamics in a region-specific and frequency-dependent manner. eLife 2022; 11:73155. [PMID: 35968845 PMCID: PMC9470163 DOI: 10.7554/elife.73155] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2021] [Accepted: 08/02/2022] [Indexed: 11/13/2022] Open
Abstract
The spiking activity of populations of cortical neurons is well described by the dynamics of a small number of population-wide covariance patterns, the 'latent dynamics'. These latent dynamics are largely driven by the same correlated synaptic currents across the circuit that determine the generation of local field potentials (LFP). Yet, the relationship between latent dynamics and LFPs remains largely unexplored. Here, we characterised this relationship for three different regions of primate sensorimotor cortex during reaching. The correlation between latent dynamics and LFPs was frequency-dependent and varied across regions. However, for any given region, this relationship remained stable throughout the behaviour: in each of primary motor and premotor cortices, the LFP-latent dynamics correlation profile was remarkably similar between movement planning and execution. These robust associations between LFPs and neural population latent dynamics help bridge the wealth of studies reporting neural correlates of behaviour using either type of recordings.
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Affiliation(s)
| | - Matthew G Perich
- Department of Neuroscience, Icahn School of Medicine at Mount Sinai, New York, United States
| | - Raeed H Chowdhury
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, United States
| | - Lee E Miller
- Department of Biomedical Engineering, Northwestern University, Evanston, United States
| | - Juan Álvaro Gallego
- Department of Bioengineering, Imperial College London, London, United Kingdom
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15
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Guest AC, O'Neill KJ, Graham D, Mirzadeh Z, Ponce FA, Greger B. Microscale electrophysiological functional connectivity in human cortico-basal ganglia network. Clin Neurophysiol 2022; 142:11-19. [DOI: 10.1016/j.clinph.2022.06.017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2022] [Revised: 06/16/2022] [Accepted: 06/30/2022] [Indexed: 11/03/2022]
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16
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Zarei M, Jahed M, Dezfouli MP, Daliri MR. Sensory representation of visual stimuli in the coupling of low-frequency phase to spike times. Brain Struct Funct 2022; 227:1641-1654. [PMID: 35106628 DOI: 10.1007/s00429-022-02460-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2021] [Accepted: 01/03/2022] [Indexed: 11/30/2022]
Abstract
Neural synchronization has been engaged in several brain mechanisms. Previous studies have shown that the interaction between the time of spiking activity and phase of local field potentials (LFPs) plays a key role in many cognitive functions. However, the potential role of this spike-LFP phase coupling (SPC) in neural coding is not fully understood. Here, we sought to investigate the role of this SPC for encoding the sensory properties of visual stimuli. To this end, we measured SPC strength in the preferred and anti-preferred motion directions of stimulus presented inside the receptive field of middle temporal (MT) neurons. We found a selective response in terms of SPC strength for different directions of motion. Remarkably, this selective function is inverted with respect to the spiking activity. In other words, the least SPC occurs for the preferred direction (based on the spike rate), and vice versa; the strongest SPC is induced in the anti-preferred direction. Altogether, these findings imply that the neural system may use spike-LFP phase coupling in the primate visual cortex to encode sensory information.
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Affiliation(s)
- Mohammad Zarei
- School of Cognitive Sciences (SCS), Institute for Research in Fundamental Sciences (IPM), Tehran, Iran.,School of Electrical Engineering, Sharif University of Technology (SUT), Tehran, Iran
| | - Mehran Jahed
- School of Electrical Engineering, Sharif University of Technology (SUT), Tehran, Iran.
| | - Mohsen Parto Dezfouli
- School of Cognitive Sciences (SCS), Institute for Research in Fundamental Sciences (IPM), Tehran, Iran
| | - Mohammad Reza Daliri
- Department of Biomedical Engineering, School of Electrical Engineering, Iran University of Science and Technology (IUST), Tehran, Iran
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17
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Savolainen OW. The significance of neural inter-frequency power correlations. Sci Rep 2021; 11:23190. [PMID: 34848759 PMCID: PMC8633012 DOI: 10.1038/s41598-021-02277-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2021] [Accepted: 10/26/2021] [Indexed: 11/29/2022] Open
Abstract
It is of great interest in neuroscience to determine what frequency bands in the brain have covarying power. This would help us robustly identify the frequency signatures of neural processes. However to date, to the best of the author's knowledge, a comprehensive statistical approach to this question that accounts for intra-frequency autocorrelation, frequency-domain oversampling, and multiple testing under dependency has not been undertaken. As such, this work presents a novel statistical significance test for correlated power across frequency bands for a broad class of non-stationary time series. It is validated on synthetic data. It is then used to test all of the inter-frequency power correlations between 0.2 and 8500 Hz in continuous intracortical extracellular neural recordings in Macaque M1, using a very large, publicly available dataset. The recordings were Current Source Density referenced and were recorded with a Utah array. The results support previous results in the literature that show that neural processes in M1 have power signatures across a very broad range of frequency bands. In particular, the power in LFP frequency bands as low as 20 Hz was found to almost always be statistically significantly correlated to the power in kHz frequency ranges. It is proposed that this test can also be used to discover the superimposed frequency domain signatures of all the neural processes in a neural signal, allowing us to identify every interesting neural frequency band.
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Affiliation(s)
- Oscar W Savolainen
- Centre for Bio-Inspired Technology, Imperial College London, London, UK.
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18
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Narrow and Broad γ Bands Process Complementary Visual Information in Mouse Primary Visual Cortex. eNeuro 2021; 8:ENEURO.0106-21.2021. [PMID: 34663617 PMCID: PMC8570688 DOI: 10.1523/eneuro.0106-21.2021] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2021] [Revised: 06/03/2021] [Accepted: 06/22/2021] [Indexed: 11/21/2022] Open
Abstract
γ Band plays a key role in the encoding of visual features in the primary visual cortex (V1). In rodents V1 two ranges within the γ band are sensitive to contrast: a broad γ band (BB) increasing with contrast, and a narrow γ band (NB), peaking at ∼60 Hz, decreasing with contrast. The functional roles of the two bands and the neural circuits originating them are not completely clear yet. Here, we show, combining experimental and simulated data, that in mice V1 (1) BB carries information about high contrast and NB about low contrast; (2) BB modulation depends on excitatory-inhibitory interplay in the cortex, while NB modulation is because of entrainment to the thalamic drive. In awake mice presented with alternating gratings, NB power progressively decreased from low to intermediate levels of contrast where it reached a plateau. Conversely, BB power was constant across low levels of contrast, but it progressively increased from intermediate to high levels of contrast. Furthermore, BB response was stronger immediately after contrast reversal, while the opposite held for NB. These complementary modulations were reproduced by a recurrent excitatory-inhibitory leaky integrate-and-fire network provided that the thalamic inputs were composed of a sustained and a periodic component having complementary sensitivity ranges. These results show that in rodents the thalamic-driven NB plays a specific key role in encoding visual contrast. Moreover, we propose a simple and effective network model of response to visual stimuli in rodents that might help in investigating network dysfunctions of pathologic visual information processing.
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19
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Cai Y, Wu T, Tao L, Xiao ZC. Model Reduction Captures Stochastic Gamma Oscillations on Low-Dimensional Manifolds. Front Comput Neurosci 2021; 15:678688. [PMID: 34489666 PMCID: PMC8418102 DOI: 10.3389/fncom.2021.678688] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2021] [Accepted: 07/23/2021] [Indexed: 12/02/2022] Open
Abstract
Gamma frequency oscillations (25–140 Hz), observed in the neural activities within many brain regions, have long been regarded as a physiological basis underlying many brain functions, such as memory and attention. Among numerous theoretical and computational modeling studies, gamma oscillations have been found in biologically realistic spiking network models of the primary visual cortex. However, due to its high dimensionality and strong non-linearity, it is generally difficult to perform detailed theoretical analysis of the emergent gamma dynamics. Here we propose a suite of Markovian model reduction methods with varying levels of complexity and apply it to spiking network models exhibiting heterogeneous dynamical regimes, ranging from nearly homogeneous firing to strong synchrony in the gamma band. The reduced models not only successfully reproduce gamma oscillations in the full model, but also exhibit the same dynamical features as we vary parameters. Most remarkably, the invariant measure of the coarse-grained Markov process reveals a two-dimensional surface in state space upon which the gamma dynamics mainly resides. Our results suggest that the statistical features of gamma oscillations strongly depend on the subthreshold neuronal distributions. Because of the generality of the Markovian assumptions, our dimensional reduction methods offer a powerful toolbox for theoretical examinations of other complex cortical spatio-temporal behaviors observed in both neurophysiological experiments and numerical simulations.
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Affiliation(s)
- Yuhang Cai
- Department of Statistics, University of Chicago, Chicago, IL, United States
| | - Tianyi Wu
- School of Mathematical Sciences, Peking University, Beijing, China.,Center for Bioinformatics, National Laboratory of Protein Engineering and Plant Genetic Engineering, School of Life Sciences, Peking University, Beijing, China
| | - Louis Tao
- Center for Bioinformatics, National Laboratory of Protein Engineering and Plant Genetic Engineering, School of Life Sciences, Peking University, Beijing, China.,Center for Quantitative Biology, Peking University, Beijing, China
| | - Zhuo-Cheng Xiao
- Courant Institute of Mathematical Sciences, New York University, New York, NY, United States
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20
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Pasternak T, Tadin D. Linking Neuronal Direction Selectivity to Perceptual Decisions About Visual Motion. Annu Rev Vis Sci 2021; 6:335-362. [PMID: 32936737 DOI: 10.1146/annurev-vision-121219-081816] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Psychophysical and neurophysiological studies of responses to visual motion have converged on a consistent set of general principles that characterize visual processing of motion information. Both types of approaches have shown that the direction and speed of target motion are among the most important encoded stimulus properties, revealing many parallels between psychophysical and physiological responses to motion. Motivated by these parallels, this review focuses largely on more direct links between the key feature of the neuronal response to motion, direction selectivity, and its utilization in memory-guided perceptual decisions. These links were established during neuronal recordings in monkeys performing direction discriminations, but also by examining perceptual effects of widespread elimination of cortical direction selectivity produced by motion deprivation during development. Other approaches, such as microstimulation and lesions, have documented the importance of direction-selective activity in the areas that are active during memory-guided direction comparisons, area MT and the prefrontal cortex, revealing their likely interactions during behavioral tasks.
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Affiliation(s)
- Tatiana Pasternak
- Department of Neuroscience, University of Rochester, Rochester, New York 14642, USA; , .,Department of Brain and Cognitive Sciences, University of Rochester, Rochester, New York 14627, USA.,Center for Visual Science, University of Rochester, Rochester, New York 14627, USA.,Del Monte Institute for Neuroscience, University of Rochester, Rochester, New York 14642, USA
| | - Duje Tadin
- Department of Neuroscience, University of Rochester, Rochester, New York 14642, USA; , .,Department of Brain and Cognitive Sciences, University of Rochester, Rochester, New York 14627, USA.,Center for Visual Science, University of Rochester, Rochester, New York 14627, USA.,Del Monte Institute for Neuroscience, University of Rochester, Rochester, New York 14642, USA.,Department of Ophthalmology, University of Rochester, Rochester, New York 14642, USA
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21
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Wienke C, Bartsch MV, Vogelgesang L, Reichert C, Hinrichs H, Heinze HJ, Dürschmid S. Mind-wandering Is Accompanied by Both Local Sleep and Enhanced Processes of Spatial Attention Allocation. Cereb Cortex Commun 2021; 2:tgab001. [PMID: 34296151 PMCID: PMC8153027 DOI: 10.1093/texcom/tgab001] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2020] [Revised: 12/28/2020] [Accepted: 12/30/2020] [Indexed: 11/30/2022] Open
Abstract
Mind-wandering (MW) is a subjective, cognitive phenomenon, in which thoughts move away from the task toward an internal train of thoughts, possibly during phases of neuronal sleep-like activity (local sleep, LS). MW decreases cortical processing of external stimuli and is assumed to decouple attention from the external world. Here, we directly tested how indicators of LS, cortical processing, and attentional selection change in a pop-out visual search task during phases of MW. Participants’ brain activity was recorded using magnetoencephalography, MW was assessed via self-report using randomly interspersed probes. As expected, the performance decreased under MW. Consistent with the occurrence of LS, MW was accompanied by a decrease in high-frequency activity (HFA, 80–150 Hz) and an increase in slow wave activity (SWA, 1–6 Hz). In contrast, visual attentional selection as indexed by the N2pc component was enhanced during MW with the N2pc amplitude being directly linked to participants’ performance. This observation clearly contradicts accounts of attentional decoupling that would predict a decrease in attention-related responses to external stimuli during MW. Together, our results suggest that MW occurs during phases of LS with processes of attentional target selection being upregulated, potentially to compensate for the mental distraction during MW.
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Affiliation(s)
- Christian Wienke
- Department of Neurology, Otto-von-Guericke University, Leipziger Str. 44, 39120 Magdeburg, Germany
| | - Mandy V Bartsch
- Department of Behavioral Neurology, Leibniz Institute for Neurobiology, Brenneckestr. 6, 39118 Magdeburg, Germany
| | - Lena Vogelgesang
- Department of Behavioral Neurology, Leibniz Institute for Neurobiology, Brenneckestr. 6, 39118 Magdeburg, Germany
| | - Christoph Reichert
- Forschungscampus STIMULATE, Otto-von-Guericke University, Universitätsplatz 2, 39106 Magdeburg, Germany.,Department of Behavioral Neurology, Leibniz Institute for Neurobiology, Brenneckestr. 6, 39118 Magdeburg, Germany.,CBBS - center of behavioral brain sciences, Otto-von-Guericke University, Universitätsplatz 2, 39106 Magdeburg, Germany
| | - Hermann Hinrichs
- Department of Neurology, Otto-von-Guericke University, Leipziger Str. 44, 39120 Magdeburg, Germany.,Forschungscampus STIMULATE, Otto-von-Guericke University, Universitätsplatz 2, 39106 Magdeburg, Germany.,Department of Behavioral Neurology, Leibniz Institute for Neurobiology, Brenneckestr. 6, 39118 Magdeburg, Germany.,CBBS - center of behavioral brain sciences, Otto-von-Guericke University, Universitätsplatz 2, 39106 Magdeburg, Germany.,German Center for Neurodegenerative Diseases (DZNE), Leipziger Str. 44, 39120 Magdeburg, Germany
| | - Hans-Jochen Heinze
- Department of Neurology, Otto-von-Guericke University, Leipziger Str. 44, 39120 Magdeburg, Germany.,Forschungscampus STIMULATE, Otto-von-Guericke University, Universitätsplatz 2, 39106 Magdeburg, Germany.,Department of Behavioral Neurology, Leibniz Institute for Neurobiology, Brenneckestr. 6, 39118 Magdeburg, Germany.,CBBS - center of behavioral brain sciences, Otto-von-Guericke University, Universitätsplatz 2, 39106 Magdeburg, Germany.,German Center for Neurodegenerative Diseases (DZNE), Leipziger Str. 44, 39120 Magdeburg, Germany
| | - Stefan Dürschmid
- Department of Neurology, Otto-von-Guericke University, Leipziger Str. 44, 39120 Magdeburg, Germany.,Department of Behavioral Neurology, Leibniz Institute for Neurobiology, Brenneckestr. 6, 39118 Magdeburg, Germany
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22
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Zhang Q, Gheres KW, Drew PJ. Origins of 1/f-like tissue oxygenation fluctuations in the murine cortex. PLoS Biol 2021; 19:e3001298. [PMID: 34264930 PMCID: PMC8282088 DOI: 10.1371/journal.pbio.3001298] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2020] [Accepted: 05/24/2021] [Indexed: 01/07/2023] Open
Abstract
The concentration of oxygen in the brain spontaneously fluctuates, and the distribution of power in these fluctuations has a 1/f-like spectra, where the power present at low frequencies of the power spectrum is orders of magnitude higher than at higher frequencies. Though these oscillations have been interpreted as being driven by neural activity, the origin of these 1/f-like oscillations is not well understood. Here, to gain insight of the origin of the 1/f-like oxygen fluctuations, we investigated the dynamics of tissue oxygenation and neural activity in awake behaving mice. We found that oxygen signal recorded from the cortex of mice had 1/f-like spectra. However, band-limited power in the local field potential did not show corresponding 1/f-like fluctuations. When local neural activity was suppressed, the 1/f-like fluctuations in oxygen concentration persisted. Two-photon measurements of erythrocyte spacing fluctuations and mathematical modeling show that stochastic fluctuations in erythrocyte flow could underlie 1/f-like dynamics in oxygenation. These results suggest that the discrete nature of erythrocytes and their irregular flow, rather than fluctuations in neural activity, could drive 1/f-like fluctuations in tissue oxygenation.
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Affiliation(s)
- Qingguang Zhang
- Center for Neural Engineering, Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, Pennsylvania, United States of America
- * E-mail: (QZ); (PJD)
| | - Kyle W. Gheres
- Graduate Program in Molecular Cellular and Integrative Biosciences, The Pennsylvania State University, University Park, Pennsylvania, United States of America
| | - Patrick J. Drew
- Center for Neural Engineering, Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, Pennsylvania, United States of America
- Department of Neurosurgery, The Pennsylvania State University, University Park, Pennsylvania, United States of America
- Department of Biomedical Engineering, The Pennsylvania State University, University Park, Pennsylvania, United States of America
- * E-mail: (QZ); (PJD)
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23
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Dąbrowska PA, Voges N, von Papen M, Ito J, Dahmen D, Riehle A, Brochier T, Grün S. On the Complexity of Resting State Spiking Activity in Monkey Motor Cortex. Cereb Cortex Commun 2021; 2:tgab033. [PMID: 34296183 PMCID: PMC8271144 DOI: 10.1093/texcom/tgab033] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2020] [Revised: 04/16/2021] [Accepted: 04/23/2021] [Indexed: 11/13/2022] Open
Abstract
Resting state has been established as a classical paradigm of brain activity studies, mostly based on large-scale measurements such as functional magnetic resonance imaging or magneto- and electroencephalography. This term typically refers to a behavioral state characterized by the absence of any task or stimuli. The corresponding neuronal activity is often called idle or ongoing. Numerous modeling studies on spiking neural networks claim to mimic such idle states, but compare their results with task- or stimulus-driven experiments, or to results from experiments with anesthetized subjects. Both approaches might lead to misleading conclusions. To provide a proper basis for comparing physiological and simulated network dynamics, we characterize simultaneously recorded single neurons' spiking activity in monkey motor cortex at rest and show the differences from spontaneous and task- or stimulus-induced movement conditions. We also distinguish between rest with open eyes and sleepy rest with eyes closed. The resting state with open eyes shows a significantly higher dimensionality, reduced firing rates, and less balance between population level excitation and inhibition than behavior-related states.
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Affiliation(s)
- Paulina Anna Dąbrowska
- Institute of Neuroscience and Medicine (INM-6 and INM-10) and Institute for Advanced Simulation (IAS-6), Jülich Research Centre, Jülich 52425, Germany
| | - Nicole Voges
- Institute of Neuroscience and Medicine (INM-6 and INM-10) and Institute for Advanced Simulation (IAS-6), Jülich Research Centre, Jülich 52425, Germany.,RWTH Aachen University, Aachen 52062, Germany
| | - Michael von Papen
- Institute of Neuroscience and Medicine (INM-6 and INM-10) and Institute for Advanced Simulation (IAS-6), Jülich Research Centre, Jülich 52425, Germany
| | - Junji Ito
- Institute of Neuroscience and Medicine (INM-6 and INM-10) and Institute for Advanced Simulation (IAS-6), Jülich Research Centre, Jülich 52425, Germany
| | - David Dahmen
- Institute of Neuroscience and Medicine (INM-6 and INM-10) and Institute for Advanced Simulation (IAS-6), Jülich Research Centre, Jülich 52425, Germany
| | - Alexa Riehle
- Institut de Neurosciences de la Timone, CNRS-AMU, Marseille 13005, France.,Institute of Neuroscience and Medicine (INM-6 and INM-10) and Institute for Advanced Simulation (IAS-6), Jülich Research Centre, Jülich 52425, Germany
| | - Thomas Brochier
- Institut de Neurosciences de la Timone, CNRS-AMU, Marseille 13005, France
| | - Sonja Grün
- Institute of Neuroscience and Medicine (INM-6 and INM-10) and Institute for Advanced Simulation (IAS-6), Jülich Research Centre, Jülich 52425, Germany.,Theoretical Systems Neurobiology, RWTH Aachen University, Aachen 52056, Germany
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24
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VanGilder P, Shi Y, Apker G, Buneo CA. Sensory feedback-dependent coding of arm position in local field potentials of the posterior parietal cortex. Sci Rep 2021; 11:9060. [PMID: 33907213 PMCID: PMC8079385 DOI: 10.1038/s41598-021-88278-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2020] [Accepted: 04/06/2021] [Indexed: 11/19/2022] Open
Abstract
Although multisensory integration is crucial for sensorimotor function, it is unclear how visual and proprioceptive sensory cues are combined in the brain during motor behaviors. Here we characterized the effects of multisensory interactions on local field potential (LFP) activity obtained from the superior parietal lobule (SPL) as non-human primates performed a reaching task with either unimodal (proprioceptive) or bimodal (visual-proprioceptive) sensory feedback. Based on previous analyses of spiking activity, we hypothesized that evoked LFP responses would be tuned to arm location but would be suppressed on bimodal trials, relative to unimodal trials. We also expected to see a substantial number of recording sites with enhanced beta band spectral power for only one set of feedback conditions (e.g. unimodal or bimodal), as was previously observed for spiking activity. We found that evoked activity and beta band power were tuned to arm location at many individual sites, though this tuning often differed between unimodal and bimodal trials. Across the population, both evoked and beta activity were consistent with feedback-dependent tuning to arm location, while beta band activity also showed evidence of response suppression on bimodal trials. The results suggest that multisensory interactions can alter the tuning and gain of arm position-related LFP activity in the SPL.
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Affiliation(s)
- Paul VanGilder
- School of Biological and Health Systems Engineering, Arizona State University, P.O. Box 879709, Tempe, AZ, 85287-9709, USA
| | - Ying Shi
- School of Biological and Health Systems Engineering, Arizona State University, P.O. Box 879709, Tempe, AZ, 85287-9709, USA
| | - Gregory Apker
- School of Biological and Health Systems Engineering, Arizona State University, P.O. Box 879709, Tempe, AZ, 85287-9709, USA
| | - Christopher A Buneo
- School of Biological and Health Systems Engineering, Arizona State University, P.O. Box 879709, Tempe, AZ, 85287-9709, USA.
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25
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Pellegrini F, Hawellek DJ, Pape AA, Hipp JF, Siegel M. Motion Coherence and Luminance Contrast Interact in Driving Visual Gamma-Band Activity. Cereb Cortex 2021; 31:1622-1631. [PMID: 33145595 DOI: 10.1093/cercor/bhaa314] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2019] [Revised: 07/28/2020] [Accepted: 09/17/2020] [Indexed: 01/06/2023] Open
Abstract
Synchronized neuronal population activity in the gamma-frequency range (>30 Hz) correlates with the bottom-up drive of various visual features. It has been hypothesized that gamma-band synchronization enhances the gain of neuronal representations, yet evidence remains sparse. We tested a critical prediction of the gain hypothesis, which is that features that drive synchronized gamma-band activity interact super-linearly. To test this prediction, we employed whole-head magnetencephalography in human subjects and investigated if the strength of visual motion (motion coherence) and luminance contrast interact in driving gamma-band activity in visual cortex. We found that gamma-band activity (64-128 Hz) monotonically increased with coherence and contrast, while lower frequency activity (8-32 Hz) decreased with both features. Furthermore, as predicted for a gain mechanism, we found a multiplicative interaction between motion coherence and contrast in their joint drive of gamma-band activity. The lower frequency activity did not show such an interaction. Our findings provide evidence that gamma-band activity acts as a cortical gain mechanism that nonlinearly combines the bottom-up drive of different visual features.
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Affiliation(s)
- Franziska Pellegrini
- Hertie Institute for Clinical Brain Research, University of Tübingen, 72076 Tübingen, Germany.,Centre for Integrative Neuroscience, University of Tübingen, 72076 Tübingen, Germany.,MEG Center, University of Tübingen, 72076 Tübingen, Germany.,Berlin Center for Advanced Neuroimaging, Charité - Universitätsmedizin Berlin, 10117 Berlin, Germany
| | - David J Hawellek
- Hertie Institute for Clinical Brain Research, University of Tübingen, 72076 Tübingen, Germany.,Centre for Integrative Neuroscience, University of Tübingen, 72076 Tübingen, Germany.,MEG Center, University of Tübingen, 72076 Tübingen, Germany.,Roche Pharma Research and Early Development, Neuroscience and Rare Diseases, Roche Innovation Center Basel, 4070 Basel, Switzerland
| | - Anna-Antonia Pape
- Centre for Integrative Neuroscience, University of Tübingen, 72076 Tübingen, Germany.,MEG Center, University of Tübingen, 72076 Tübingen, Germany
| | - Joerg F Hipp
- Centre for Integrative Neuroscience, University of Tübingen, 72076 Tübingen, Germany.,MEG Center, University of Tübingen, 72076 Tübingen, Germany.,Roche Pharma Research and Early Development, Neuroscience and Rare Diseases, Roche Innovation Center Basel, 4070 Basel, Switzerland
| | - Markus Siegel
- Hertie Institute for Clinical Brain Research, University of Tübingen, 72076 Tübingen, Germany.,Centre for Integrative Neuroscience, University of Tübingen, 72076 Tübingen, Germany.,MEG Center, University of Tübingen, 72076 Tübingen, Germany
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26
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Parto Dezfouli M, Zarei M, Constantinidis C, Daliri MR. Task-specific modulation of PFC activity for matching-rule governed decision-making. Brain Struct Funct 2021; 226:443-455. [PMID: 33398431 DOI: 10.1007/s00429-020-02191-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2020] [Accepted: 11/27/2020] [Indexed: 01/08/2023]
Abstract
Storing information from incoming stimuli in working memory (WM) is essential for decision-making. The prefrontal cortex (PFC) plays a key role to support this process. Previous studies have characterized different neuronal populations in the PFC for working memory judgements based on whether an originally presented stimulus matches a subsequently presented one (matching-rule decision-making). However, much remains to be understood about this mechanism at the population level of PFC neurons. Here, we hypothesized differences in processing of feature vs. spatial WM within the PFC during a matching-rule decision-making task. To test this hypothesis, the modulation of neural activity within the PFC during two types of decision-making tasks (spatial WM and feature WM) in comparison to a passive fixation task was determined. We discovered that neural population-level activity within the PFC is different for the match vs. non-match condition exclusively in the case of the feature-specific decision-making task. For this task, the non-match condition exhibited a greater firing rate and lower trial-to-trial variability in spike count compared to the feature-match condition. Furthermore, the feature-match condition exhibited lower variability compared to the spatial-match condition. This was accompanied by a faster behavioral response time for the feature-match compared to the spatial-match WM task. We attribute this lower across-trial spiking variability and behavioral response time to a higher task-relevant attentional level in the feature WM compared to the spatial WM task. The findings support our hypothesis for task-specific differences in the processing of feature vs. spatial WM within the PFC. This also confirms the general conclusion that PFC neurons play an important role during the process of matching-rule governed decision-making.
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Affiliation(s)
- Mohsen Parto Dezfouli
- School of Cognitive Sciences (SCS), Institute for Research in Fundamental Sciences (IPM), Tehran, Iran. .,Neuroscience and Neuroengineering Research Laboratory, Department of Biomedical Engineering, School of Electrical Engineering, Iran University of Science and Technology (IUST), Tehran, Iran.
| | - Mohammad Zarei
- School of Cognitive Sciences (SCS), Institute for Research in Fundamental Sciences (IPM), Tehran, Iran.,School of Electrical Engineering, Sharif University of Technology, Tehran, Iran
| | - Christos Constantinidis
- Department of Neurobiology and Anatomy, Wake Forest School of Medicine, Winston-Salem, NC, 27157, USA
| | - Mohammad Reza Daliri
- School of Cognitive Sciences (SCS), Institute for Research in Fundamental Sciences (IPM), Tehran, Iran. .,Neuroscience and Neuroengineering Research Laboratory, Department of Biomedical Engineering, School of Electrical Engineering, Iran University of Science and Technology (IUST), Tehran, Iran.
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27
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Krishna A, Tanabe S, Kohn A. Decision Signals in the Local Field Potentials of Early and Mid-Level Macaque Visual Cortex. Cereb Cortex 2021; 31:169-183. [PMID: 32852540 PMCID: PMC7727373 DOI: 10.1093/cercor/bhaa218] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2019] [Revised: 06/12/2020] [Accepted: 07/14/2020] [Indexed: 12/28/2022] Open
Abstract
The neural basis of perceptual decision making has typically been studied using measurements of single neuron activity, though decisions are likely based on the activity of large neuronal ensembles. Local field potentials (LFPs) may, in some cases, serve as a useful proxy for population activity and thus be useful for understanding the neural basis of perceptual decision making. However, little is known about whether LFPs in sensory areas include decision-related signals. We therefore analyzed LFPs recorded using two 48-electrode arrays implanted in primary visual cortex (V1) and area V4 of macaque monkeys trained to perform a fine orientation discrimination task. We found significant choice information in low (0-30 Hz) and higher (70-500 Hz) frequency components of the LFP, but little information in gamma frequencies (30-70 Hz). Choice information was more robust in V4 than V1 and stronger in LFPs than in simultaneously measured spiking activity. LFP-based choice information included a global component, common across electrodes within an area. Our findings reveal the presence of robust choice-related signals in the LFPs recorded in V1 and V4 and suggest that LFPs may be a useful complement to spike-based analyses of decision making.
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Affiliation(s)
- Aravind Krishna
- Dominick Purpura Department of Neuroscience, Albert Einstein College of Medicine, Bronx, NY 10461, USA
- Department of Bioengineering, School of Chemical and Biotechnology, SASTRA University, Thanjavur 613401, India
| | - Seiji Tanabe
- Dominick Purpura Department of Neuroscience, Albert Einstein College of Medicine, Bronx, NY 10461, USA
| | - Adam Kohn
- Dominick Purpura Department of Neuroscience, Albert Einstein College of Medicine, Bronx, NY 10461, USA
- Department of Ophthalmology and Visual Sciences, Albert Einstein College of Medicine, Bronx, NY 10461, USA
- Department of Systems and Computational Biology, Albert Einstein College of Medicine, Bronx, NY 10461, USA
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28
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Frontotemporal Regulation of Subjective Value to Suppress Impulsivity in Intertemporal Choices. J Neurosci 2020; 41:1727-1737. [PMID: 33334869 DOI: 10.1523/jneurosci.1196-20.2020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2020] [Revised: 11/06/2020] [Accepted: 11/12/2020] [Indexed: 11/21/2022] Open
Abstract
Impulsive decisions arise from preferring smaller but sooner rewards compared with larger but later rewards. How neural activity and attention to choice alternatives contribute to reward decisions during temporal discounting is not clear. Here we probed (1) attention to and (2) neural representation of delay and reward information in humans (both sexes) engaged in choices. We studied behavioral and frequency-specific dynamics supporting impulsive decisions on a fine-grained temporal scale using eye tracking and MEG recordings. In one condition, participants had to decide for themselves but pretended to decide for their best friend in a second prosocial condition, which required perspective taking. Hence, conditions varied in the value for themselves versus that pretending to choose for another person. Stronger impulsivity was reliably found across three independent groups for prosocial decisions. Eye tracking revealed a systematic shift of attention from the delay to the reward information and differences in eye tracking between conditions predicted differences in discounting. High-frequency activity (175-250 Hz) distributed over right frontotemporal sensors correlated with delay and reward information in consecutive temporal intervals for high value decisions for oneself but not the friend. Collectively, the results imply that the high-frequency activity recorded over frontotemporal MEG sensors plays a critical role in choice option integration.SIGNIFICANCE STATEMENT Humans face decisions between sooner smaller rewards and larger later rewards daily. An objective benefit of losing weight over a longer time might be devalued in face of ice cream because they prefer currently available options because of insufficiently considering long-term alternatives. The degree of contribution of neural representation and attention to choice alternatives is not clear. We investigated correlates of such decisions in participants deciding for themselves or pretending to choose for a friend. Behaviorally participants discounted less in self-choices compared with the prosocial condition. Eye movement and MEG recordings revealed how participants represent choice options most evident for options with high subjective value. These results advance our understanding of neural mechanisms underlying decision-making in humans.
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29
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Dürschmid S, Reichert C, Hinrichs H, Heinze HJ, Kirsch HE, Knight RT, Deouell LY. Direct Evidence for Prediction Signals in Frontal Cortex Independent of Prediction Error. Cereb Cortex 2020; 29:4530-4538. [PMID: 30590422 DOI: 10.1093/cercor/bhy331] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2018] [Revised: 11/27/2018] [Accepted: 11/29/2018] [Indexed: 12/13/2022] Open
Abstract
Predictive coding (PC) has been suggested as one of the main mechanisms used by brains to interact with complex environments. PC theories posit top-down prediction signals, which are compared with actual outcomes, yielding in turn prediction error (PE) signals, which are used, bottom-up, to modify the ensuing predictions. However, disentangling prediction from PE signals has been challenging. Critically, while many studies found indirect evidence for PC in the form of PE signals, direct evidence for the prediction signal is mostly lacking. Here, we provide clear evidence, obtained from intracranial cortical recordings in human surgical patients, that the human lateral prefrontal cortex evinces prediction signals while anticipating an event. Patients listened to task-irrelevant sequences of repetitive tones including infrequent predictable or unpredictable pitch deviants. The broadband high-frequency amplitude (HFA) was decreased prior to the onset of expected relative to unexpected deviants in the frontal cortex only, and its amplitude was sensitive to the increasing likelihood of deviants following longer trains of standards in the unpredictable condition. Single-trial HFA predicted deviations and correlated with poststimulus response to deviations. These results provide direct evidence for frontal cortex prediction signals independent of PE signals.
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Affiliation(s)
- Stefan Dürschmid
- Department of Behavioral Neurology, Leibniz Institute for Neurobiology, Brenneckestr. 6, Magdeburg, Germany.,Department of Neurology, Otto-von-Guericke University, Leipziger Str. 44, Magdeburg, Germany
| | - Christoph Reichert
- Department of Behavioral Neurology, Leibniz Institute for Neurobiology, Brenneckestr. 6, Magdeburg, Germany.,CBBS-Center of Behavioral Brain Sciences, Otto-von-Guericke University, Universitätsplatz 2, Magdeburg, Germany
| | - Hermann Hinrichs
- Department of Behavioral Neurology, Leibniz Institute for Neurobiology, Brenneckestr. 6, Magdeburg, Germany.,Department of Neurology, Otto-von-Guericke University, Leipziger Str. 44, Magdeburg, Germany.,Stereotactic Neurosurgery, Otto-von-Guericke University, Leipziger Str. 44, Magdeburg, Germany.,German Center for Neurodegenerative Diseases (DZNE), Leipziger Str. 44, Magdeburg, Germany.,Forschungscampus STIMULATE, Otto-von-Guericke University, Universitätsplatz 2, Magdeburg, Germany.,CBBS-Center of Behavioral Brain Sciences, Otto-von-Guericke University, Universitätsplatz 2, Magdeburg, Germany
| | - Hans-Jochen Heinze
- Department of Behavioral Neurology, Leibniz Institute for Neurobiology, Brenneckestr. 6, Magdeburg, Germany.,Department of Neurology, Otto-von-Guericke University, Leipziger Str. 44, Magdeburg, Germany.,Stereotactic Neurosurgery, Otto-von-Guericke University, Leipziger Str. 44, Magdeburg, Germany.,German Center for Neurodegenerative Diseases (DZNE), Leipziger Str. 44, Magdeburg, Germany.,Forschungscampus STIMULATE, Otto-von-Guericke University, Universitätsplatz 2, Magdeburg, Germany.,CBBS-Center of Behavioral Brain Sciences, Otto-von-Guericke University, Universitätsplatz 2, Magdeburg, Germany
| | - Heidi E Kirsch
- Department of Neurology, University of California, 400 Parnassus Avenue, San Francisco, CA, USA
| | - Robert T Knight
- Helen Wills Neuroscience Institute and Department of Psychology, University of California, Berkeley, CA, USA
| | - Leon Y Deouell
- Edmond and Lily Safra Center for Brain Sciences and Department of Psychology, The Hebrew University of Jerusalem, Mount Scopus, Jerusalem, Israel
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30
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Salehi S, A Dehaqani MR, Noudoost B, Esteky H. Distinct mechanisms of face representation by enhancive and suppressive neurons of the inferior temporal cortex. J Neurophysiol 2020; 124:1216-1228. [PMID: 32902342 DOI: 10.1152/jn.00203.2020] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
Face-selective neurons in the inferior temporal (IT) cortex respond to faces by either increasing (ENH) or decreasing (SUP) their spiking activities compared with their baseline. Although nearly half of IT face neurons are selectively suppressed by face stimulation, their role in face representation is not clear. To address this issue, we recorded the spiking activities and local field potential (LFP) from IT cortex of three monkeys while they viewed a large set of visual stimuli. LFP high-gamma (HG-LFP) power indicated the presence of both ENH and SUP face-selective neural clusters in IT cortex. The magnitude of HG-LFP power of the recording sites was correlated with the magnitude of change in the evoked spiking activities of its constituent neurons for both ENH and SUP face clusters. Spatial distribution of the ENH and SUP face clusters suggests the presence of a complex and heterogeneous face hypercluster organization in IT cortex. Importantly, ENH neurons conveyed more face category and SUP neurons conveyed more face identity information at both the single-unit and neuronal population levels. Onset and peak of suppressive single-unit, neuronal population, and HG-LFP power activities lagged those of the ENH ones. These results demonstrate that IT neuronal code for face representation is optimized by increasing sparseness through selective suppression of a subset of face neurons. We suggest that IT cortex contains spatial clusters of both ENH and SUP face neurons with distinct specialized functional role in face representation.NEW & NOTEWORTHY Electrophysiological and imaging studies have suggested that face information is encoded by a network of clusters of enhancive face-selective neurons in the visual cortex of man and monkey. We show that nearly half of face-selective neurons are suppressed by face stimulation. The suppressive neurons form spatial clusters and convey more face identity information than the enhancive face neurons. Our results suggest the presence of two neuronal subsystems for coarse and fine face information processing.
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Affiliation(s)
- Sina Salehi
- Shiraz Neuroscience Research Center, Shiraz University of Medical Sciences, Shiraz, Iran
| | - Mohammad Reza A Dehaqani
- Cognitive Systems Laboratory, Control and Intelligent Processing Center of Excellence, School of Electrical and Computer Engineering, University of Tehran, Tehran, Iran
| | - Behrad Noudoost
- Department of Ophthalmology and Visual Sciences, University of Utah, Salt Lake City, Utah
| | - Hossein Esteky
- Research Group for Brain and Cognitive Sciences, Shahid Beheshti University of Medical Sciences, Tehran, Iran
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31
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Zarei M, Parto Dezfouli M, Jahed M, Daliri MR. Adaptation Modulates Spike-Phase Coupling Tuning Curve in the Rat Primary Auditory Cortex. Front Syst Neurosci 2020; 14:55. [PMID: 32848646 PMCID: PMC7416672 DOI: 10.3389/fnsys.2020.00055] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2020] [Accepted: 07/13/2020] [Indexed: 12/02/2022] Open
Abstract
Adaptation is an important mechanism that causes a decrease in the neural response both in terms of local field potentials (LFP) and spiking activity. We previously showed this reduction effect in the tuning curve of the primary auditory cortex. Moreover, we revealed that a repeated stimulus reduces the neural response in terms of spike-phase coupling (SPC). In the current study, we examined the effect of adaptation on the SPC tuning curve. To this end, employing the phase-locking value (PLV) method, we estimated the spike-LFP coupling. The data was obtained by a simultaneous recording from four single-electrodes in the primary auditory cortex of 15 rats. We first investigated whether the neural system may use spike-LFP phase coupling in the primary auditory cortex to encode sensory information. Secondly, we investigated the effect of adaptation on this potential SPC tuning. Our data showed that the coupling between spikes’ times and the LFP phase in beta oscillations represents sensory information (different stimulus frequencies), with an inverted bell-shaped tuning curve. Furthermore, we showed that adaptation to a specific frequency modulates SPC tuning curve of the adapter and its neighboring frequencies. These findings could be useful for interpretation of feature representation in terms of SPC and the underlying neural mechanism of adaptation.
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Affiliation(s)
- Mohammad Zarei
- School of Cognitive Sciences (SCS), Institute for Research in Fundamental Sciences (IPM), Tehran, Iran.,School of Electrical Engineering, Sharif University of Technology (SUT), Tehran, Iran
| | - Mohsen Parto Dezfouli
- School of Cognitive Sciences (SCS), Institute for Research in Fundamental Sciences (IPM), Tehran, Iran.,Neuroscience and Neuroengineering Research Laboratory, Department of Biomedical Engineering, School of Electrical Engineering, Iran University of Science and Technology (IUST), Tehran, Iran
| | - Mehran Jahed
- School of Electrical Engineering, Sharif University of Technology (SUT), Tehran, Iran
| | - Mohammad Reza Daliri
- School of Cognitive Sciences (SCS), Institute for Research in Fundamental Sciences (IPM), Tehran, Iran.,Neuroscience and Neuroengineering Research Laboratory, Department of Biomedical Engineering, School of Electrical Engineering, Iran University of Science and Technology (IUST), Tehran, Iran
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32
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Martini ML, Oermann EK, Opie NL, Panov F, Oxley T, Yaeger K. Sensor Modalities for Brain-Computer Interface Technology: A Comprehensive Literature Review. Neurosurgery 2020; 86:E108-E117. [PMID: 31361011 DOI: 10.1093/neuros/nyz286] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2019] [Accepted: 05/04/2019] [Indexed: 12/23/2022] Open
Abstract
Brain-computer interface (BCI) technology is rapidly developing and changing the paradigm of neurorestoration by linking cortical activity with control of an external effector to provide patients with tangible improvements in their ability to interact with the environment. The sensor component of a BCI circuit dictates the resolution of brain pattern recognition and therefore plays an integral role in the technology. Several sensor modalities are currently in use for BCI applications and are broadly either electrode-based or functional neuroimaging-based. Sensors vary in their inherent spatial and temporal resolutions, as well as in practical aspects such as invasiveness, portability, and maintenance. Hybrid BCI systems with multimodal sensory inputs represent a promising development in the field allowing for complimentary function. Artificial intelligence and deep learning algorithms have been applied to BCI systems to achieve faster and more accurate classifications of sensory input and improve user performance in various tasks. Neurofeedback is an important advancement in the field that has been implemented in several types of BCI systems by showing users a real-time display of their recorded brain activity during a task to facilitate their control over their own cortical activity. In this way, neurofeedback has improved BCI classification and enhanced user control over BCI output. Taken together, BCI systems have progressed significantly in recent years in terms of accuracy, speed, and communication. Understanding the sensory components of a BCI is essential for neurosurgeons and clinicians as they help advance this technology in the clinical setting.
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Affiliation(s)
- Michael L Martini
- Department of Neurosurgery, Mount Sinai Hospital, New York, New York
| | - Eric Karl Oermann
- Department of Neurosurgery, Mount Sinai Hospital, New York, New York
| | - Nicholas L Opie
- Vascular Bionics Laboratory, Department of Medicine, Melbourne University, Melbourne, Australia
| | - Fedor Panov
- Department of Neurosurgery, Mount Sinai Hospital, New York, New York
| | - Thomas Oxley
- Department of Neurosurgery, Mount Sinai Hospital, New York, New York.,Vascular Bionics Laboratory, Department of Medicine, Melbourne University, Melbourne, Australia
| | - Kurt Yaeger
- Department of Neurosurgery, Mount Sinai Hospital, New York, New York
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33
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Abstract
An ideal observer is a theoretical model observer that performs a specific sensory-perceptual task optimally, making the best possible use of the available information given physical and biological constraints. An image-computable ideal observer (pixels in, estimates out) is a particularly powerful type of ideal observer that explicitly models the flow of visual information from the stimulus-encoding process to the eventual decoding of a sensory-perceptual estimate. Image-computable ideal observer analyses underlie some of the most important results in vision science. However, most of what we know from ideal observers about visual processing and performance derives from relatively simple tasks and relatively simple stimuli. This review describes recent efforts to develop image-computable ideal observers for a range of tasks with natural stimuli and shows how these observers can be used to predict and understand perceptual and neurophysiological performance. The reviewed results establish principled links among models of neural coding, computational methods for dimensionality reduction, and sensory-perceptual performance in tasks with natural stimuli.
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Affiliation(s)
- Johannes Burge
- Department of Psychology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA; .,Neuroscience Graduate Group, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.,Bioengineering Graduate Group, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
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34
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Khamechian MB, Daliri MR. Decoding Adaptive Visuomotor Behavior Mediated by Non-linear Phase Coupling in Macaque Area MT. Front Neurosci 2020; 14:230. [PMID: 32317912 PMCID: PMC7147352 DOI: 10.3389/fnins.2020.00230] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2019] [Accepted: 03/02/2020] [Indexed: 12/20/2022] Open
Abstract
The idea that a flexible behavior relies on synchronous neural activity within intra- and inter-associated cortical areas has been a matter of intense research in human and animal neuroscience. The neurophysiological mechanisms underlying this behavioral correlate of the synchronous activity are still unknown. It has been suggested that the strength of neural synchrony at the level of population is an important neural code to guide an efficient transformation of the sensory input into the behavioral action. In this study, we have examined the non-linear synchronization between neural ensembles in area MT of the macaque visual cortex by employing a non-linear cross-frequency coupling technique, namely bicoherence. We trained a macaque monkey to detect a brief change in the cued stimulus during a visuomotor detection task. The results show that the non-linear phase synchronization in the high-gamma frequency band (100-250 Hz) predicts the animal's reaction time. The strength of non-linear phase synchronization is selective to the target stimulus location. In addition, the non-linearity characteristics of neural synchronization are selectively modulated when the monkey covertly attends to the stimulus inside the neuron's receptive field. This additional evidence indicates that non-linear neuronal synchronization may be affected by a cognitive function like spatial attention. Our neural and behavioral observations reflect that two crucial processes may be involved in processing of visuomotor information in area MT: (I) a non-linear cortical process (measured by the bicoherence) and (II) a linear process (measured by the spectral power).
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Affiliation(s)
- Mohammad Bagher Khamechian
- Neuroscience and Neuroengineering Research Lab, Biomedical Engineering Department, School of Electrical Engineering, Iran University of Science & Technology, Tehran, Iran
| | - Mohammad Reza Daliri
- Neuroscience and Neuroengineering Research Lab, Biomedical Engineering Department, School of Electrical Engineering, Iran University of Science & Technology, Tehran, Iran
- Cognitive Neurobiology Laboratory, School of Cognitive Sciences (SCS), Institute for Research in Fundamental Sciences (IPM), Tehran, Iran
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35
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Dubey A, Ray S. Comparison of tuning properties of gamma and high-gamma power in local field potential (LFP) versus electrocorticogram (ECoG) in visual cortex. Sci Rep 2020; 10:5422. [PMID: 32214127 PMCID: PMC7096473 DOI: 10.1038/s41598-020-61961-9] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2019] [Accepted: 03/06/2020] [Indexed: 12/25/2022] Open
Abstract
Electrocorticogram (ECoG), obtained from macroelectrodes placed on the cortex, is typically used in drug-resistant epilepsy patients, and is increasingly being used to study cognition in humans. These studies often use power in gamma (30-70 Hz) or high-gamma (>80 Hz) ranges to make inferences about neural processing. However, while the stimulus tuning properties of gamma/high-gamma power have been well characterized in local field potential (LFP; obtained from microelectrodes), analogous characterization has not been done for ECoG. Using a hybrid array containing both micro and ECoG electrodes implanted in the primary visual cortex of two female macaques (for some stimulus conditions, separate ECoG and microelectrode arrays in two additional male macaques were also used), we compared the stimulus tuning preferences of gamma/high-gamma power in LFP versus ECoG in up to four monkeys, and found them to be surprisingly similar. High-gamma power, thought to index the average firing rate around the electrode, was highest for the smallest stimulus (0.3° radius), and decreased with increasing size in both LFP and ECoG, suggesting local origins of both signals. Further, gamma oscillations were similarly tuned in LFP and ECoG to stimulus orientation, contrast and spatial frequency. This tuning was significantly weaker in electroencephalogram (EEG), suggesting that ECoG is more like LFP than EEG. Overall, our results validate the use of ECoG in clinical and basic cognitive research.
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Affiliation(s)
- Agrita Dubey
- Centre for Neuroscience, Indian Institute of Science, Bangalore, 560012, India
- Center for Neural Science, New York University, New York, 10003, USA
| | - Supratim Ray
- Centre for Neuroscience, Indian Institute of Science, Bangalore, 560012, India.
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36
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Schrouff J, Raccah O, Baek S, Rangarajan V, Salehi S, Mourão-Miranda J, Helili Z, Daitch AL, Parvizi J. Fast temporal dynamics and causal relevance of face processing in the human temporal cortex. Nat Commun 2020; 11:656. [PMID: 32005819 PMCID: PMC6994602 DOI: 10.1038/s41467-020-14432-8] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2018] [Accepted: 12/12/2019] [Indexed: 11/30/2022] Open
Abstract
We measured the fast temporal dynamics of face processing simultaneously across the human temporal cortex (TC) using intracranial recordings in eight participants. We found sites with selective responses to faces clustered in the ventral TC, which responded increasingly strongly to marine animal, bird, mammal, and human faces. Both face-selective and face-active but non-selective sites showed a posterior to anterior gradient in response time and selectivity. A sparse model focusing on information from the human face-selective sites performed as well as, or better than, anatomically distributed models when discriminating faces from non-faces stimuli. Additionally, we identified the posterior fusiform site (pFUS) as causally the most relevant node for inducing distortion of conscious face processing by direct electrical stimulation. These findings support anatomically discrete but temporally distributed response profiles in the human brain and provide a new common ground for unifying the seemingly contradictory modular and distributed modes of face processing.
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Affiliation(s)
- Jessica Schrouff
- Laboratory of Behavioral and Cognitive Neuroscience, Stanford University, Palo Alto, CA, USA
- Computer Science Department, University College London, Gower street, London, WC1E6BT, UK
| | - Omri Raccah
- Laboratory of Behavioral and Cognitive Neuroscience, Stanford University, Palo Alto, CA, USA
| | - Sori Baek
- Laboratory of Behavioral and Cognitive Neuroscience, Stanford University, Palo Alto, CA, USA
| | - Vinitha Rangarajan
- Laboratory of Behavioral and Cognitive Neuroscience, Stanford University, Palo Alto, CA, USA
- Department of Psychology, University of California, Berkeley, CA, USA
| | - Sina Salehi
- Laboratory of Behavioral and Cognitive Neuroscience, Stanford University, Palo Alto, CA, USA
| | - Janaina Mourão-Miranda
- Computer Science Department, University College London, Gower street, London, WC1E6BT, UK
| | - Zeinab Helili
- Laboratory of Behavioral and Cognitive Neuroscience, Stanford University, Palo Alto, CA, USA
| | - Amy L Daitch
- Laboratory of Behavioral and Cognitive Neuroscience, Stanford University, Palo Alto, CA, USA
| | - Josef Parvizi
- Laboratory of Behavioral and Cognitive Neuroscience, Stanford University, Palo Alto, CA, USA.
- Department of Neurology and Neurological Sciences, Stanford University Medical Center, Palo Alto, CA, USA.
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Abstract
The gold standard in brain-computer interface (BCI) modalities is multi single-unit recordings in the primary motor cortex. It yields the fastest and most elegant control (i.e., most degrees of freedom and bitrate). Unfortunately, single-unit electrodes are prone to encapsulation, which limit their single-unit recording life. However, encapsulation does not significantly affect intracortical local field potentials (LFPs). LFPs and single-unit activity were recorded from the motor cortices of three monkeys (Macaca fascicularis) while they performed a standard 3D center-out reaching task and a 3D circle-drawing task. The high frequency (HF) (60-200 Hz) spectral amplitudes of a subset of the LFPs were found to be directionally tuned much like single units. In fact, stable isolation of single units on the same electrode increased the likelihood that the HF-LFP would be significantly cosine tuned to hand direction. The presence of significantly tuned single units further increased the likelihood of a tuned HF-LFP, suggesting that this band of HF-LFP activity is at least partially generated by local neuronal action potential currents (i.e., single-unit activity). Given that encapsulation makes recording single units over a long period of time difficult, these results suggest that HF-LFPs may be a more stable and efficient method of monitoring neural activity for BCI applications.
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Affiliation(s)
| | - Daniel W Moran
- Biomedical Engineering, Washington University, St. Louis, MO, United States.
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Mohan YS, Jayakumar J, Lloyd EKJ, Levichkina E, Vidyasagar TR. Diversity of Feature Selectivity in Macaque Visual Cortex Arising from a Limited Number of Broadly Tuned Input Channels. Cereb Cortex 2019; 29:5255-5268. [PMID: 31220214 DOI: 10.1093/cercor/bhz063] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023] Open
Abstract
Spike (action potential) responses of most primary visual cortical cells in the macaque are sharply tuned for the orientation of a line or an edge, and neurons preferring similar orientations are clustered together in cortical columns. The preferred stimulus orientation of these columns span the full range of orientations, as observed in recordings of spikes and in classical optical imaging of intrinsic signals. However, when we imaged the putative thalamic input to striate cortical cells that can be seen in imaging of intrinsic signals when they are analyzed on a larger spatial scale, we found that the orientation domain map of the primary visual cortex did not show the same diversity of orientations. This map was dominated by just the one orientation that is most commonly preferred by neurons in the retina and the lateral geniculate nucleus. This supports cortical feature selectivity and columnar architecture being built upon feed-forward signals transmitted from the thalamus in a very limited number of broadly tuned input channels.
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Affiliation(s)
- Yamni S Mohan
- Department of Optometry & Vision Science, University of Melbourne, Parkville, Victoria, Australia
| | - Jaikishan Jayakumar
- Department of Optometry & Vision Science, University of Melbourne, Parkville, Victoria, Australia.,Centre for Computational Brain Research, Indian Institute of Technology-Madras, Chennai, India
| | - Errol K J Lloyd
- Department of Optometry & Vision Science, University of Melbourne, Parkville, Victoria, Australia
| | - Ekaterina Levichkina
- Department of Optometry & Vision Science, University of Melbourne, Parkville, Victoria, Australia.,Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia
| | - Trichur R Vidyasagar
- Department of Optometry & Vision Science, University of Melbourne, Parkville, Victoria, Australia.,Melbourne Neuroscience Institute, University of Melbourne, Parkville, Victoria, Australia
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Iivanainen J, Zetter R, Parkkonen L. Potential of on-scalp MEG: Robust detection of human visual gamma-band responses. Hum Brain Mapp 2019; 41:150-161. [PMID: 31571310 PMCID: PMC7267937 DOI: 10.1002/hbm.24795] [Citation(s) in RCA: 37] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2019] [Revised: 08/09/2019] [Accepted: 09/03/2019] [Indexed: 11/25/2022] Open
Abstract
Electrophysiological signals recorded intracranially show rich frequency content spanning from near‐DC to hundreds of hertz. Noninvasive electromagnetic signals measured with electroencephalography (EEG) or magnetoencephalography (MEG) typically contain less signal power in high frequencies than invasive recordings. Particularly, noninvasive detection of gamma‐band activity (>30 Hz) is challenging since coherently active source areas are small at such frequencies and the available imaging methods have limited spatial resolution. Compared to EEG and conventional SQUID‐based MEG, on‐scalp MEG should provide substantially improved spatial resolution, making it an attractive method for detecting gamma‐band activity. Using an on‐scalp array comprised of eight optically pumped magnetometers (OPMs) and a conventional whole‐head SQUID array, we measured responses to a dynamic visual stimulus known to elicit strong gamma‐band responses. OPMs had substantially higher signal power than SQUIDs, and had a slightly larger relative gamma‐power increase over the baseline. With only eight OPMs, we could obtain gamma‐activity source estimates comparable to those of SQUIDs at the group level. Our results show the feasibility of OPMs to measure gamma‐band activity. To further facilitate the noninvasive detection of gamma‐band activity, the on‐scalp OPM arrays should be optimized with respect to sensor noise, the number of sensors and intersensor spacing.
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Affiliation(s)
- Joonas Iivanainen
- Department of Neuroscience and Biomedical Engineering, Aalto University School of Science, Espoo, Finland
| | - Rasmus Zetter
- Department of Neuroscience and Biomedical Engineering, Aalto University School of Science, Espoo, Finland
| | - Lauri Parkkonen
- Department of Neuroscience and Biomedical Engineering, Aalto University School of Science, Espoo, Finland.,Aalto Neuroimaging, Aalto University, Espoo, Finland
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40
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Decramer T, Premereur E, Uytterhoeven M, Van Paesschen W, van Loon J, Janssen P, Theys T. Single-cell selectivity and functional architecture of human lateral occipital complex. PLoS Biol 2019; 17:e3000280. [PMID: 31513563 PMCID: PMC6759181 DOI: 10.1371/journal.pbio.3000280] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2019] [Revised: 09/24/2019] [Accepted: 08/20/2019] [Indexed: 02/06/2023] Open
Abstract
The human lateral occipital complex (LOC) is more strongly activated by images of objects compared to scrambled controls, but detailed information at the neuronal level is currently lacking. We recorded with microelectrode arrays in the LOC of 2 patients and obtained highly selective single-unit, multi-unit, and high-gamma responses to images of objects. Contrary to predictions derived from functional imaging studies, all neuronal properties indicated that the posterior subsector of LOC we recorded from occupies an unexpectedly high position in the hierarchy of visual areas. Notably, the response latencies of LOC neurons were long, the shape selectivity was spatially clustered, LOC receptive fields (RFs) were large and bilateral, and a number of LOC neurons exhibited three-dimensional (3D)-structure selectivity (a preference for convex or concave stimuli), which are all properties typical of end-stage ventral stream areas. Thus, our results challenge prevailing ideas about the position of the more posterior subsector of LOC in the hierarchy of visual areas.
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Affiliation(s)
- Thomas Decramer
- Laboratory for Neuro- and Psychophysiology, KU Leuven and the Leuven Brain Institute, Leuven, Belgium
- Department of Neurosurgery, University Hospitals Leuven, Leuven, Belgium
- Research Group Experimental Neurosurgery and Neuroanatomy, KU Leuven and the Leuven Brain Institute, Leuven, Belgium
| | - Elsie Premereur
- Laboratory for Neuro- and Psychophysiology, KU Leuven and the Leuven Brain Institute, Leuven, Belgium
| | - Mats Uytterhoeven
- Research Group Experimental Neurosurgery and Neuroanatomy, KU Leuven and the Leuven Brain Institute, Leuven, Belgium
| | - Wim Van Paesschen
- Department of Neurology, University Hospitals Leuven, Leuven, Belgium
- Laboratory for Epilepsy Research, KU Leuven, Leuven, Belgium
| | - Johannes van Loon
- Department of Neurosurgery, University Hospitals Leuven, Leuven, Belgium
- Research Group Experimental Neurosurgery and Neuroanatomy, KU Leuven and the Leuven Brain Institute, Leuven, Belgium
| | - Peter Janssen
- Laboratory for Neuro- and Psychophysiology, KU Leuven and the Leuven Brain Institute, Leuven, Belgium
| | - Tom Theys
- Department of Neurosurgery, University Hospitals Leuven, Leuven, Belgium
- Research Group Experimental Neurosurgery and Neuroanatomy, KU Leuven and the Leuven Brain Institute, Leuven, Belgium
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41
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Gong X, Li W, Liang H. Spike-field Granger causality for hybrid neural data analysis. J Neurophysiol 2019; 122:809-822. [DOI: 10.1152/jn.00246.2019] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023] Open
Abstract
Neurotechnological innovations allow for simultaneous recording at various scales, ranging from spiking activity of individual neurons to large neural populations’ local field potentials (LFPs). This capability necessitates developing multiscale analysis of spike-field activity. A joint analysis of the hybrid neural data is crucial for bridging the scales between single neurons and local networks. Granger causality is a fundamental measure to evaluate directional influences among neural signals. However, it is mainly limited to inferring causal influence between the same type of signals—either LFPs or spike trains—and not well developed between two different signal types. Here we propose a model-free, nonparametric spike-field Granger causality measure for hybrid data analysis. Our measure is distinct from existing methods in that we use “binless” spikes (precise spike timing) rather than “binned” spikes (spike counts within small consecutive time windows). The latter clearly distort the information in the mixed analysis of spikes and LFP. Therefore, our spectral estimate of spike trains is directly applied to the neural point process itself, i.e., sequences of spike times rather than spike counts. Our measure is validated by an extensive set of simulated data. When the measure is applied to LFPs and spiking activity simultaneously recorded from visual areas V1 and V4 of monkeys performing a contour detection task, we are able to confirm computationally the long-standing experimental finding of the input-output relationship between LFPs and spikes. Importantly, we demonstrate that spike-field Granger causality can be used to reveal the modulatory effects that are inaccessible by traditional methods, such that spike→LFP Granger causality is modulated by the behavioral task, whereas LFP→spike Granger causality is mainly related to the average synaptic input. NEW & NOTEWORTHY It is a pressing question to study the directional interactions between local field potential (LFP) and spiking activity. In this report, we propose a model-free, nonparametric spike-field Granger causality measure that can be used to reveal directional influences between spikes and LFPs. This new measure is crucial for bridging the scales between single neurons and neural networks; hence it represents an important step to explicate how the brain orchestrates information processing.
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Affiliation(s)
- Xiajing Gong
- School of Biomedical Engineering, Science, and Health Systems, Drexel University, Philadelphia, Pennsylvania
| | - Wu Li
- State Key Laboratory of Cognitive Neuroscience and Learning and IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, China
| | - Hualou Liang
- School of Biomedical Engineering, Science, and Health Systems, Drexel University, Philadelphia, Pennsylvania
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42
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Single-Trial Decoding from Local Field Potential Using Bag of Word Representation. Brain Topogr 2019; 33:10-21. [PMID: 31363879 DOI: 10.1007/s10548-019-00726-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2018] [Accepted: 07/25/2019] [Indexed: 10/26/2022]
Abstract
Neural decoding allows us to study the brain functions by investigating the relationship between a stimulus and the corresponding response. Recently, the local field potential (LFP) has been targeted as a hallmark of brain activity for neural decoding. Despite several decoding methods, there is still a lack of a comprehensive framework to decode cognitive functions in an integrated structure. Here, we addressed this issue by developing a dictionary-based method to represent the LFP signals via a bag-of-words (BOW) approach. First, we defined a general dictionary consisting of various Gabor wavelets as the words which enabled us to represent LFPs in word domain. For each trial, the LFP signal was convolved with the dictionary words. The integral of the absolute value and the mean phase of the complex output were considered as histogram weights. In the next step, using cross-validation leave-one-out method, the trials were split into the training and test sets. The weights of each individual word were swapped across trials within a certain category of the training set while the sequential order was maintained. Finally, the test trial was classified using label voting in the k-nearest training trials. We conducted the proposed method on two independent LFP data sets, recorded from the rat primary auditory cortex (A1) and monkey middle temporal area in order to evaluate its efficiency. In addition to the chance level, the proposed method was compared with a standard BOW approach that has been extended recently for biomedical signals classification. Results show a high efficiency (~ 15% improvement in decoding accuracy) of the proposed method. Together, the aforementioned method provides a comprehensive framework for single-trial decoding from short-length electrophysiological signals.
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43
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Mohammadi Z, Kincaid JM, Pun SH, Klug A, Liu C, Lei TC. Computationally inexpensive enhanced growing neural gas algorithm for real-time adaptive neural spike clustering. J Neural Eng 2019; 16:056007. [DOI: 10.1088/1741-2552/ab208c] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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44
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Parto Dezfouli M, Zarei M, Jahed M, Daliri MR. Stimulus-Specific Adaptation Decreases the Coupling of Spikes to LFP Phase. Front Neural Circuits 2019; 13:44. [PMID: 31333419 PMCID: PMC6616079 DOI: 10.3389/fncir.2019.00044] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2019] [Accepted: 06/18/2019] [Indexed: 11/19/2022] Open
Abstract
Stimulus repetition suppresses the neural activity in different sensory areas of the brain. This mechanism of so-called stimulus-specific adaptation (SSA) has been observed in both spiking activity and local field potential (LFP) responses. However, much remains to be known about the effect of SSA on the spike–LFP relation. In this study, we approached this issue by investigating the spike-phase coupling (SPC) in control and adapting paradigms. For the control paradigm, pure tones were presented in a random unbiased sequence. In the adapting paradigm, the same stimuli were presented in a random pattern but it was biased to an adapter stimulus. In fact, the adapter occupied 80% of the adapting sequence. During the tasks, LFP and multi-unit activity were recorded simultaneously from the primary auditory cortex of 15 anesthetized rats. To clarify the effect of adaptation on the relation between spike and LFP responses, the SPC of the adapter stimulus in these two paradigms was evaluated. Here, we employed phase locking value method for calculating the SPC. Our data show a strong coupling of spikes to LFP phase most prominently in beta band. This coupling was observed to decrease in the adapting condition compared to the control one. Importantly, we found that adaptation reduces spikes dominantly from the preferred phase of LFP in which spikes are more likely to be present there. As a result, the preferred phase of LFP may play a key role in coordinating neuronal spiking activity in neural adaptation mechanism. This finding is important for interpretation of the underlying neural mechanism of adaptation and also can be used in the context of the network and related connectivity models.
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Affiliation(s)
- Mohsen Parto Dezfouli
- Neuroscience and Neuroengineering Research Laboratory, Biomedical Engineering Department, School of Electrical Engineering, Iran University of Science and Technology, Tehran, Iran
| | - Mohammad Zarei
- Department of Electrical Engineering, Sharif University of Technology, Tehran, Iran
| | - Mehran Jahed
- Department of Electrical Engineering, Sharif University of Technology, Tehran, Iran
| | - Mohammad Reza Daliri
- Neuroscience and Neuroengineering Research Laboratory, Biomedical Engineering Department, School of Electrical Engineering, Iran University of Science and Technology, Tehran, Iran
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45
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Routing information flow by separate neural synchrony frequencies allows for "functionally labeled lines" in higher primate cortex. Proc Natl Acad Sci U S A 2019; 116:12506-12515. [PMID: 31147468 PMCID: PMC6589668 DOI: 10.1073/pnas.1819827116] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022] Open
Abstract
Dynamical coordination of the neural activity between individual neurons is known to have a key role in the efficient transfer of sensory information to associative areas. Here, we report a role of interneuronal synchrony within the high-gamma (180 to 220 Hz) frequency range of activity in macaque area MT (a visual area in the dorsal visual pathway) in determining behavioral performance. This is, however, in contrast to previous reports for the ventral visual pathway (such as area V4), where only gamma range (40 to 70 Hz) was observed to play a role. We propose that such a difference between the functional coordination in different visual pathways might be used to unambiguously identify the source of input to the higher areas. Efficient transfer of sensory information to higher (motor or associative) areas in primate visual cortical areas is crucial for transforming sensory input into behavioral actions. Dynamically increasing the level of coordination between single neurons has been suggested as an important contributor to this efficiency. We propose that differences between the functional coordination in different visual pathways might be used to unambiguously identify the source of input to the higher areas, ensuring a proper routing of the information flow. Here we determined the level of coordination between neurons in area MT in macaque visual cortex in a visual attention task via the strength of synchronization between the neurons’ spike timing relative to the phase of oscillatory activities in local field potentials. In contrast to reports on the ventral visual pathway, we observed the synchrony of spikes only in the range of high gamma (180 to 220 Hz), rather than gamma (40 to 70 Hz) (as reported previously) to predict the animal’s reaction speed. This supports a mechanistic role of the phase of high-gamma oscillatory activity in dynamically modulating the efficiency of neuronal information transfer. In addition, for inputs to higher cortical areas converging from the dorsal and ventral pathway, the distinct frequency bands of these inputs can be leveraged to preserve the identity of the input source. In this way source-specific oscillatory activity in primate cortex can serve to establish and maintain “functionally labeled lines” for dynamically adjusting cortical information transfer and multiplexing converging sensory signals.
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46
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Barbaro MF, Kramer DR, Nune G, Lee MB, Peng T, Liu CY, Kellis S, Lee B. Directional tuning during reach planning in the supramarginal gyrus using local field potentials. J Clin Neurosci 2019; 64:214-219. [PMID: 31023574 DOI: 10.1016/j.jocn.2019.03.061] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2019] [Accepted: 03/27/2019] [Indexed: 11/15/2022]
Abstract
Previous work in directional tuning for brain machine interfaces has primarily relied on algorithm sorted neuronal action potentials in primary motor cortex. However, local field potential has been utilized to show directional tuning in macaque studies, and inferior parietal cortex has shown increased neuronal activity in reaching tasks that relied on MRI imaging. In this study we utilized local field potential recordings from a human subject performing a delayed reach task and show that high frequency band (76-100 Hz) spectral power is directionally tuned to different reaching target locations during an active reach. We also show that during the delay phase of the task, directional tuning is present in areas of the inferior parietal cortex, in particular, the supramarginal gyrus.
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Affiliation(s)
- Michael F Barbaro
- Department of Neurological Surgery, Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, United States.
| | - Daniel R Kramer
- Department of Neurological Surgery, Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, United States
| | - George Nune
- Department of Neurology, University of Southern California Keck School of Medicine, Los Angeles, CA, United States
| | - Morgan B Lee
- Department of Neurological Surgery, Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, United States
| | - Terrance Peng
- Department of Neurological Surgery, Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, United States
| | - Charles Y Liu
- Department of Neurological Surgery, Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, United States; USC Neurorestoration Center, Keck School of Medicine of USC, Los Angeles, CA, United States
| | - Spencer Kellis
- Department of Neurological Surgery, Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, United States; Department of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, United States; USC Neurorestoration Center, Keck School of Medicine of USC, Los Angeles, CA, United States
| | - Brian Lee
- Department of Neurological Surgery, Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, United States; USC Neurorestoration Center, Keck School of Medicine of USC, Los Angeles, CA, United States
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Single-Cell Membrane Potential Fluctuations Evince Network Scale-Freeness and Quasicriticality. J Neurosci 2019; 39:4738-4759. [PMID: 30952810 DOI: 10.1523/jneurosci.3163-18.2019] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2018] [Revised: 03/01/2019] [Accepted: 03/25/2019] [Indexed: 11/21/2022] Open
Abstract
What information single neurons receive about general neural circuit activity is a fundamental question for neuroscience. Somatic membrane potential (V m) fluctuations are driven by the convergence of synaptic inputs from a diverse cross-section of upstream neurons. Furthermore, neural activity is often scale-free, implying that some measurements should be the same, whether taken at large or small scales. Together, convergence and scale-freeness support the hypothesis that single V m recordings carry useful information about high-dimensional cortical activity. Conveniently, the theory of "critical branching networks" (one purported explanation for scale-freeness) provides testable predictions about scale-free measurements that are readily applied to V m fluctuations. To investigate, we obtained whole-cell current-clamp recordings of pyramidal neurons in visual cortex of turtles with unknown genders. We isolated fluctuations in V m below the firing threshold and analyzed them by adapting the definition of "neuronal avalanches" (i.e., spurts of population spiking). The V m fluctuations which we analyzed were scale-free and consistent with critical branching. These findings recapitulated results from large-scale cortical population data obtained separately in complementary experiments using microelectrode arrays described previously (Shew et al., 2015). Simultaneously recorded single-unit local field potential did not provide a good match, demonstrating the specific utility of V m Modeling shows that estimation of dynamical network properties from neuronal inputs is most accurate when networks are structured as critical branching networks. In conclusion, these findings extend evidence of critical phenomena while also establishing subthreshold pyramidal neuron V m fluctuations as an informative gauge of high-dimensional cortical population activity.SIGNIFICANCE STATEMENT The relationship between membrane potential (V m) dynamics of single neurons and population dynamics is indispensable to understanding cortical circuits. Just as important to the biophysics of computation are emergent properties such as scale-freeness, where critical branching networks offer insight. This report makes progress on both fronts by comparing statistics from single-neuron whole-cell recordings with population statistics obtained with microelectrode arrays. Not only are fluctuations of somatic V m scale-free, they match fluctuations of population activity. Thus, our results demonstrate appropriation of the brain's own subsampling method (convergence of synaptic inputs) while extending the range of fundamental evidence for critical phenomena in neural systems from the previously observed mesoscale (fMRI, LFP, population spiking) to the microscale, namely, V m fluctuations.
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Drebitz E, Schledde B, Kreiter AK, Wegener D. Optimizing the Yield of Multi-Unit Activity by Including the Entire Spiking Activity. Front Neurosci 2019; 13:83. [PMID: 30809117 PMCID: PMC6379978 DOI: 10.3389/fnins.2019.00083] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2018] [Accepted: 01/25/2019] [Indexed: 11/25/2022] Open
Abstract
Neurophysiological data acquisition using multi-electrode arrays and/or (semi-) chronic recordings frequently has to deal with low signal-to-noise ratio (SNR) of neuronal responses and potential failure of detecting evoked responses within random background fluctuations. Conventional methods to extract action potentials (spikes) from background noise often apply thresholds to the recorded signal, usually allowing reliable detection of spikes when data exhibit a good SNR, but often failing when SNR is poor. We here investigate a threshold-independent, fast, and automated procedure for analysis of low SNR data, based on fullwave-rectification and low-pass filtering the signal as a measure of the entire spiking activity (ESA). We investigate the sensitivity and reliability of the ESA-signal for detecting evoked responses by applying an automated receptive field (RF) mapping procedure to semi-chronically recorded data from primary visual cortex (V1) of five macaque monkeys. For recording sites with low SNR, the usage of ESA improved the detection rate of RFs by a factor of 2.5 in comparison to MUA-based detection. For recording sites with medium and high SNR, ESA delivered 30% more RFs than MUA. This significantly higher yield of ESA-based RF-detection still hold true when using an iterative procedure for determining the optimal spike threshold for each MUA individually. Moreover, selectivity measures for ESA-based RFs were quite compatible with MUA-based RFs. Regarding RF size, ESA delivered larger RFs than thresholded MUA, but size difference was consistent over all SNR fractions. Regarding orientation selectivity, ESA delivered more sites with significant orientation-dependent responses but with somewhat lower orientation indexes than MUA. However, preferred orientations were similar for both signal types. The results suggest that ESA is a powerful signal for applications requiring automated, fast, and reliable response detection, as e.g., brain-computer interfaces and neuroprosthetics, due to its high sensitivity and its independence from user-dependent intervention. Because the full information of the spiking activity is preserved, ESA also constitutes a valuable alternative for offline analysis of data with limited SNR.
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Affiliation(s)
- Eric Drebitz
- Brain Research Institute, Center for Cognitive Science, University of Bremen, Bremen, Germany
| | - Bastian Schledde
- Brain Research Institute, Center for Cognitive Science, University of Bremen, Bremen, Germany
| | - Andreas K Kreiter
- Brain Research Institute, Center for Cognitive Science, University of Bremen, Bremen, Germany
| | - Detlef Wegener
- Brain Research Institute, Center for Cognitive Science, University of Bremen, Bremen, Germany
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Fayyaz Z, Bahadorian M, Doostmohammadi J, Davoodnia V, Khodadadian S, Lashgari R. Multifractal detrended fluctuation analysis of continuous neural time series in primate visual cortex. J Neurosci Methods 2019; 312:84-92. [PMID: 30452979 DOI: 10.1016/j.jneumeth.2018.10.039] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2018] [Revised: 10/29/2018] [Accepted: 10/29/2018] [Indexed: 11/25/2022]
Abstract
BACKGROUND Local field potential (LFP) recordings have become an important tool to study the activity of populations of neurons. The functional activity of LFPs is usually compared with the activity of neighboring single spike neurons with sampling rates much higher than those of the continuous field potential channel (5 kHz). However, comparison of these signals generated with the lower sampling rate technique is important. NEW METHOD In this study, we provide an analysis of extracellular field potential time series using the sophisticated nonlinear multifractal detrended fluctuation analysis (MF-DFA). Using the MF-DFA, we demonstrate that the integral of the singularity spectrum is a powerful new method to measure the response tuning of spikes in the continuous field potential channel. RESULTS Results show that the spikes in the continuous channel at frequency ranges above the LFP component signals were consistently tuned similar to those in the spike channel. Our results also show that using a low-pass filter (<250 Hz), which is commonly applied as a preprocessing step to insulate LFPs from spikes, significantly influences the nonlinearity of the multifractal time series. COMPARISON WITH EXISTING METHODS AND CONCLUSIONS Our approach for inferring the tuning curve of spiking activity from the continuous channel has some advantages compared to conventional methods such as spike trains. The MF-DFA does not require any preprocessing of the raw signal data and makes no assumptions about the time series characteristics. This method is robust and can be applied to short time series of continuous raw signals.
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Affiliation(s)
- Zahra Fayyaz
- Brain Engineering Research Center, Institute for Research in Fundamental Sciences, Tehran 19395-5746, Iran; Department of Physics, Sharif University of Technology, Tehran 11155-9161, Iran
| | - Mohammadreza Bahadorian
- Brain Engineering Research Center, Institute for Research in Fundamental Sciences, Tehran 19395-5746, Iran; Department of Physics, Sharif University of Technology, Tehran 11155-9161, Iran
| | - Jafar Doostmohammadi
- Brain Engineering Research Center, Institute for Research in Fundamental Sciences, Tehran 19395-5746, Iran; Department of Neuroscience, School of Advanced Technologies in Medicine, Tehran University of Medical Sciences, Tehran, Iran
| | - Vandad Davoodnia
- Brain Engineering Research Center, Institute for Research in Fundamental Sciences, Tehran 19395-5746, Iran
| | - Sajad Khodadadian
- Brain Engineering Research Center, Institute for Research in Fundamental Sciences, Tehran 19395-5746, Iran; Department of Physics, Sharif University of Technology, Tehran 11155-9161, Iran
| | - Reza Lashgari
- Brain Engineering Research Center, Institute for Research in Fundamental Sciences, Tehran 19395-5746, Iran.
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Meyer G, Carponcy J, Salin PA, Comte JC. Differential recordings of local field potential: A genuine tool to quantify functional connectivity. PLoS One 2018; 13:e0209001. [PMID: 30586445 PMCID: PMC6306170 DOI: 10.1371/journal.pone.0209001] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2018] [Accepted: 11/28/2018] [Indexed: 11/18/2022] Open
Abstract
Local field potential (LFP) recording is a very useful electrophysiological method to study brain processes. However, this method is criticized for recording low frequency activity in a large area of extracellular space potentially contaminated by distal activity. Here, we theoretically and experimentally compare ground-referenced (RR) with differential recordings (DR). We analyze electrical activity in the rat cortex with these two methods. Compared with RR, DR reveals the importance of local phasic oscillatory activities and their coherence between cortical areas. Finally, we show that DR provides a more faithful assessment of functional connectivity caused by an increase in the signal to noise ratio, and of the delay in the propagation of information between two cortical structures.
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Affiliation(s)
- Gabriel Meyer
- Forgetting and Cortical Dynamics Team, Lyon Neuroscience Research Center (CRNL), Centre National de la Recherche Scientifique (CNRS), Institut National de la Santé et de la Recherche Médicale (INSERM), University Lyon 1, Lyon, France
| | - Julien Carponcy
- Forgetting and Cortical Dynamics Team, Lyon Neuroscience Research Center (CRNL), Centre National de la Recherche Scientifique (CNRS), Institut National de la Santé et de la Recherche Médicale (INSERM), University Lyon 1, Lyon, France
| | - Paul Antoine Salin
- Biphotonic Microscopy Team, Lyon Neuroscience Research Center (CRNL), Centre National de la Recherche Scientifique (CNRS), Institut National de la Santé et de la Recherche Médicale (INSERM), University Lyon 1, Lyon, France
| | - Jean-Christophe Comte
- Forgetting and Cortical Dynamics Team, Lyon Neuroscience Research Center (CRNL), Centre National de la Recherche Scientifique (CNRS), Institut National de la Santé et de la Recherche Médicale (INSERM), University Lyon 1, Lyon, France
- Biphotonic Microscopy Team, Lyon Neuroscience Research Center (CRNL), Centre National de la Recherche Scientifique (CNRS), Institut National de la Santé et de la Recherche Médicale (INSERM), University Lyon 1, Lyon, France
- * E-mail:
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