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For: Subramanian S. Significance of population size on the fixation of nonsynonymous mutations in genes under varying levels of selection pressure. Genetics 2013;193:995-1002. [PMID: 23307899 DOI: 10.1534/genetics.112.147900] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
Number Cited by Other Article(s)
1
Li Y, Wang D, Wang W, Yang W, Gao J, Zhang W, Shan L, Kang M, Chen Y, Ma T. A chromosome-level Populus qiongdaoensis genome assembly provides insights into tropical adaptation and a cryptic turnover of sex determination. Mol Ecol 2023;32:1366-1380. [PMID: 35712997 DOI: 10.1111/mec.16566] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2022] [Revised: 05/24/2022] [Accepted: 06/10/2022] [Indexed: 01/17/2023]
2
Zhao Q, Zhang R, Xiao Y, Niu Y, Shao F, Li Y, Peng Z. Comparative Transcriptome Profiling of the Loaches Triplophysa bleekeri and Triplophysa rosa Reveals Potential Mechanisms of Eye Degeneration. Front Genet 2020;10:1334. [PMID: 32010191 PMCID: PMC6977438 DOI: 10.3389/fgene.2019.01334] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2019] [Accepted: 12/06/2019] [Indexed: 12/30/2022]  Open
3
Hamabata T, Kinoshita G, Kurita K, Cao PL, Ito M, Murata J, Komaki Y, Isagi Y, Makino T. Endangered island endemic plants have vulnerable genomes. Commun Biol 2019;2:244. [PMID: 31263788 PMCID: PMC6597543 DOI: 10.1038/s42003-019-0490-7] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2018] [Accepted: 06/03/2019] [Indexed: 11/29/2022]  Open
4
Wang K, Shen Y, Yang Y, Gan X, Liu G, Hu K, Li Y, Gao Z, Zhu L, Yan G, He L, Shan X, Yang L, Lu S, Zeng H, Pan X, Liu C, Yuan Y, Feng C, Xu W, Zhu C, Xiao W, Dong Y, Wang W, Qiu Q, He S. Morphology and genome of a snailfish from the Mariana Trench provide insights into deep-sea adaptation. Nat Ecol Evol 2019;3:823-833. [PMID: 30988486 DOI: 10.1038/s41559-019-0864-8] [Citation(s) in RCA: 89] [Impact Index Per Article: 14.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2018] [Accepted: 03/06/2019] [Indexed: 12/30/2022]
5
Subramanian S. Influence of Effective Population Size on Genes under Varying Levels of Selection Pressure. Genome Biol Evol 2018;10:756-762. [PMID: 29608718 PMCID: PMC5841380 DOI: 10.1093/gbe/evy047] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 02/21/2018] [Indexed: 11/14/2022]  Open
6
Botero-Castro F, Tilak MK, Justy F, Catzeflis F, Delsuc F, Douzery EJP. In Cold Blood: Compositional Bias and Positive Selection Drive the High Evolutionary Rate of Vampire Bats Mitochondrial Genomes. Genome Biol Evol 2018;10:2218-2239. [PMID: 29931241 PMCID: PMC6127110 DOI: 10.1093/gbe/evy120] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 06/18/2018] [Indexed: 12/24/2022]  Open
7
Gene Golden Age paradox and its partial solution. Genomics 2018. [PMID: 29526483 DOI: 10.1016/j.ygeno.2018.02.015] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
8
Fujisawa T, Vogler AP, Barraclough TG. Ecology has contrasting effects on genetic variation within species versus rates of molecular evolution across species in water beetles. Proc Biol Sci 2015;282:20142476. [PMID: 25621335 DOI: 10.1098/rspb.2014.2476] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]  Open
9
Zhan J, Thrall PH, Papaïx J, Xie L, Burdon JJ. Playing on a pathogen's weakness: using evolution to guide sustainable plant disease control strategies. ANNUAL REVIEW OF PHYTOPATHOLOGY 2015;53:19-43. [PMID: 25938275 DOI: 10.1146/annurev-phyto-080614-120040] [Citation(s) in RCA: 111] [Impact Index Per Article: 11.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
10
Deng F, Xia C, Jia X, Song T, Liu J, Lai SJ, Chen SY. Comparative Study on the Genetic Diversity ofGHRGene in Tibetan Cattle and Holstein Cows. Anim Biotechnol 2015;26:217-21. [DOI: 10.1080/10495398.2014.993082] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
11
Luisi P, Alvarez-Ponce D, Pybus M, Fares MA, Bertranpetit J, Laayouni H. Recent positive selection has acted on genes encoding proteins with more interactions within the whole human interactome. Genome Biol Evol 2015;7:1141-54. [PMID: 25840415 PMCID: PMC4419801 DOI: 10.1093/gbe/evv055] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]  Open
12
McCandlish DM, Stoltzfus A. Modeling evolution using the probability of fixation: history and implications. QUARTERLY REVIEW OF BIOLOGY 2014;89:225-52. [PMID: 25195318 DOI: 10.1086/677571] [Citation(s) in RCA: 102] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
13
Zhang J, Lou X, Zellmer L, Liu S, Xu N, Liao DJ. Just like the rest of evolution in Mother Nature, the evolution of cancers may be driven by natural selection, and not by haphazard mutations. Oncoscience 2014;1:580-90. [PMID: 25594068 PMCID: PMC4278337 DOI: 10.18632/oncoscience.83] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2014] [Accepted: 09/17/2014] [Indexed: 12/24/2022]  Open
14
Szövényi P, Devos N, Weston DJ, Yang X, Hock Z, Shaw JA, Shimizu KK, McDaniel SF, Wagner A. Efficient purging of deleterious mutations in plants with haploid selfing. Genome Biol Evol 2014;6:1238-52. [PMID: 24879432 PMCID: PMC4041004 DOI: 10.1093/gbe/evu099] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]  Open
15
Lou X, Zhang J, Liu S, Xu N, Liao DJ. The other side of the coin: the tumor-suppressive aspect of oncogenes and the oncogenic aspect of tumor-suppressive genes, such as those along the CCND-CDK4/6-RB axis. Cell Cycle 2014;13:1677-93. [PMID: 24799665 DOI: 10.4161/cc.29082] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]  Open
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