Integrating spatial and ecological information into comprehensive biodiversity monitoring on agricultural land

Biodiversity loss on agricultural land is a major concern. Comprehensive monitoring is needed to quantify the ongoing changes and assess the effectiveness of agri-environmental measures. However, current approaches to monitoring biodiversity on agricultural land are limited in their ability to capture the complex pattern of species and habitats. Using a real-world example of plant and habitat monitoring on Swiss agricultural land, we show how meaningful and efficient sampling can be achieved at the relevant scales. The multi-stage sampling design of this approach uses unequal probability sampling in combination with intermediate small-scale habitat sampling to ensure broad representation of regions, landscape types, and plant species. To achieve broad coverage of temporary agri-environmental measures, the baseline survey on permanent plots is complemented by dynamic sampling of these specific areas. Sampling efficiency and practicality are ensured at all stages of sampling through modern sampling techniques, such as unequal probability sampling with fixed sample size, self-weighting, spatial spreading, balancing on additional information, and stratified balancing. In this way, the samples are well distributed across ecological and geographic space. Despite the high complexity of the sampling design, simple estimators are provided. The effects of stratified balancing and clustering of samples are demonstrated in Monte Carlo simulations using modelled habitat data. A power analysis based on actual survey data is also presented. Overall, the study could serve as a useful example for improving future biodiversity monitoring networks on agricultural land at multiple scales.

Temporal changes in the Swiss flora: implications for flower-visiting insects

Background

Local floristic diversity has massively decreased during the twentieth century in Central Europe even though in the 1990s diversity began increasing again in several regions. However, little is known whether this increase is equally distributed among plant groups with different reproductive traits.

Methods

Our study is based on data of the Swiss Biodiversity Monitoring Program. In this program, plant species occurrence is recorded since 2001 in 450 regularly distributed 1 km2 study sites. For all 1774 plant species registered in the study, we researched data on flower/pseudanthium type and colour, reproductive system, and groups of flower visitors. We then tested whether temporal changes in species frequency were equally distributed among species with different trait states.

Results

Species richness and functional richness significantly increased in the study sites while functional evenness decreased. The frequency of wind-pollinated species increased more strongly than that of insect-pollinated species. Further, the frequency of species with simple, open insect-pollinated flowers and pseudanthia visited by generalist groups of insects increased slightly more strongly than the frequency of species with complex flowers visited by more specialized groups of flower visitors. Additionally, the frequency of self-compatible species increased significantly more than that of self-incompatible species. Thus, the overall increase in local plant species richness in Switzerland is mostly driven by wind- and generalist insect-pollinated, self-compatible species. In contrast, species with complex flowers, which are essential for specialized groups of flower visitors and species with self-incompatible reproductive systems profited less.

Conclusions

Our study thus emphasizes the need to consider functional traits in the planning and monitoring of conservation activities, and calls for a special focus on plant species with specialized reproductive traits.

Negative effects of nitrogen deposition on Swiss butterflies

Nitrogen (N) deposition from agriculture and combustion of fossil fuels is a major threat to plant diversity, but its effects on organisms at higher trophic levels are unclear. We investigated how N deposition may affect species richness and abundance (number of individuals per species) in butterflies. We reviewed the peer-reviewed literature on variables used to explain spatial variation in butterfly species richness and found that vegetation variables appeared to be as important as climate and habitat variables in explaining butterfly species richness. It thus seemed likely that increased N deposition could indirectly affect butterfly communities via its influence on plant communities. To test this prediction, we analyzed data from the Swiss biodiversity monitoring program for vascular plants and butterflies in 383 study sites of 1 km² that are evenly distributed throughout Switzerland. The area has a modeled N deposition gradient of 2-44 kg N ha^-1 year^-1 . We used traditional linear models and structural equation models to infer the drivers of the spatial variation in butterfly species richness across Switzerland. High N deposition was consistently linked to low butterfly diversity, suggesting a net loss of butterfly diversity through increased N deposition. We hypothesize that at low elevations, N deposition may contribute to a reduction in butterfly species richness via microclimatic cooling due to increased plant biomass. At higher elevations, negative effects of N deposition on butterfly species richness may also be mediated by reduced plant species richness. In most butterfly species, abundance was negatively related to N deposition, but the strongest negative effects were found for species of conservation concern. We conclude that in addition to factors such as intensified agriculture, habitat fragmentation, and climate change, N deposition is likely to play a key role in negatively affecting butterfly diversity and abundance.

Species turnover reveals hidden effects of decreasing nitrogen deposition in mountain hay meadows

Nitrogen (N) deposition is a major threat to biodiversity in many habitats. The recent introduction of cleaner technologies in Switzerland has led to a reduction in the emissions of nitrogen oxides, with a consequent decrease in N deposition. We examined different drivers of plant community change, that is, N deposition, climate warming, and land-use change, in Swiss mountain hay meadows, using data from the Swiss biodiversity monitoring program. We compared indicator values of species that disappeared from or colonized a site (species turnover) with the indicator values of randomly chosen species from the same site. While oligotrophic plant species were more likely to colonize, compared to random expectation, we found only weak shifts in plant community composition. In particular, the average nutrient value of plant communities remained stable over time (2003-2017). We found the largest deviations from random expectation in the nutrient values of colonizing species, suggesting that N deposition or other factors that change the nutrient content of soils were important drivers of the species composition change over the last 15 years in Swiss mountain hay meadows. In addition, we observed an overall replacement of species with lower indicator values for temperature with species with higher values. Apparently, the community effects of the replacement of eutrophic species with oligotrophic species was outweighed by climate warming. Our results add to the increasing evidence that plant communities in changing environments may be relatively stable regarding average species richness or average indicator values, but that this apparent stability is often accompanied by a marked turnover of species.

Using change-point models to estimate empirical critical loads for nitrogen in mountain ecosystems

To protect ecosystems and their services, the critical load concept has been implemented under the framework of the Convention on Long-range Transboundary Air Pollution (UNECE) to develop effects-oriented air pollution abatement strategies. Critical loads are thresholds below which damaging effects on sensitive habitats do not occur according to current knowledge. Here we use change-point models applied in a Bayesian context to overcome some of the difficulties when estimating empirical critical loads for nitrogen (N) from empirical data. We tested the method using simulated data with varying sample sizes, varying effects of confounding variables, and with varying negative effects of N deposition on species richness. The method was applied to the national-scale plant species richness data from mountain hay meadows and (sub)alpine scrubs sites in Switzerland. Seven confounding factors (elevation, inclination, precipitation, calcareous content, aspect as well as indicator values for humidity and light) were selected based on earlier studies examining numerous environmental factors to explain Swiss vascular plant diversity. The estimated critical load confirmed the existing empirical critical load of 5-15 kg N ha^-1 yr^-1 for (sub)alpine scrubs, while for mountain hay meadows the estimated critical load was at the lower end of the current empirical critical load range. Based on these results, we suggest to narrow down the critical load range for mountain hay meadows to 10-15 kg N ha^-1 yr^-1.

Nitrogen deposition and multi-dimensional plant diversity at the landscape scale

Estimating effects of nitrogen (N) deposition is essential for understanding human impacts on biodiversity. However, studies relating atmospheric N deposition to plant diversity are usually restricted to small plots of high conservation value. Here, we used data on 381 randomly selected 1 km(2) plots covering most habitat types of Central Europe and an elevational range of 2900 m. We found that high atmospheric N deposition was associated with low values of six measures of plant diversity. The weakest negative relation to N deposition was found in the traditionally measured total species richness. The strongest relation to N deposition was in phylogenetic diversity, with an estimated loss of 19% due to atmospheric N deposition as compared with a homogeneously distributed historic N deposition without human influence, or of 11% as compared with a spatially varying N deposition for the year 1880, during industrialization in Europe. Because phylogenetic plant diversity is often related to ecosystem functioning, we suggest that atmospheric N deposition threatens functioning of ecosystems at the landscape scale.