Fishes from the Itapecuru River basin, state of Maranhão, northeast Brazil

Fish diversity in the rivers that drain the Baixada Maranhense and the Mearim basin in northeastern Brazil

The Baixada Maranhense Environmental Protection Area of the Brazilian state of Maranhão encompasses a biologically rich region that includes the basins of four principal rivers, the Mearim, Pericumã, Pindaré, and Turiaçu, which form a complex of wetlands. The present study provides a comprehensive inventory of the fish fauna of the rivers that drain the Baixada Maranhense based on the identification of voucher specimens that were deposited in a scientific collection. Expeditions were conducted between 2014 and 2020. The inventory identified a total of 100 fish species representing 79 genera, 34 families, and 11 orders, which are found in both freshwater and estuarine environments. Six (Potamotrygon orbignyi, Leporinus piau, Moenkhausia loweae, Serrasalmus spilopleura, Pachypops fourcroi and Peckoltia greedoi) of the 100 taxa identified here are considered to be new records for one or more of the basins surveyed during this study, based on the existing data, while four - Colossoma macropomum, Megaleporinus macrocephalus, Cichla sp. and Cichla kelberi - are not native. The most speciose orders were the Siluriformes and Characiformes, while the most diverse families were the Loricariidae, Characidae, Auchenipteridae, Cichlidae, and Serrasalmidae. These data are consistent with the findings of most of the previous studies of freshwater ecosystems in the Neotropical region, in particular those of the rivers of Maranhão. The results of the present study represent an important advance in the understanding of the diversity of the fish fauna of the Mearim, Pericumã, Pindaré, and Turiaçu rivers, which are still poorly studied, and have likely had their diversity underestimated up to now.

The DNA barcode reveals cryptic diversity and a new record for the genus Leporinus (Characiformes, Anostomidae) in the hydrographic basins of central northern Brazil

Leporinus is one of the most speciose genera of the order Characiformes, with 81 valid species distributed throughout much of Central and South America. The considerable diversity of this genus has generated extensive debate on its classification and internal arrangement. In the present study, we investigated the species diversity of the genus Leporinus in central northern Brazil, and conclude that six valid species-Leporinus maculatus, Leporinus unitaeniatus, Leporinus affinis, Leporinus venerei, Leporinus cf. friderici, and Leporinus piau-are found in the hydrographic basins of the Brazilian states of Maranhão, Piauí, and Tocantins. We analyzed 182 sequences of the Cytochrome Oxidase subunit I gene, of which, 157 were obtained from Leporinus specimens collected from the basins of the Itapecuru, Mearim, Turiaçu, Pericumã, Periá, Preguiças, Parnaíba, and Tocantins rivers. The species delimitation analyses, based on the ABGD, ASAP, mPTP, bPTP, and GMYC methods, revealed the presence of four distinct molecular operational taxonomic units (MOTUs), identified as L. maculatus, L. unitaeniatus, L. affinis, and L. piau (from the Parnaíba River). The bPTP method restricted L. venerei to a single MOTU, and confirmed the occurrence of this species in the rivers of Maranhão for the first time. The separation of L. cf. friderici into two clades and the subsequent formation of different operational taxonomic units was consistent with polyphyly in this species, which indicates the existence of cryptic diversity. The arrangement of L. cf. friderici and L. piau in two different clades supports the conclusion that the L. piau specimens from Maranhão were misidentified, based on their morphological traits, reflecting the taxonomic inconsistencies that exist among morphologically similar species. Overall, then, the species delimitation methods employed in the present study indicated the presence of six MOTUs-L. maculatus, L. unitaenitus, L. affinis, L. cf. friderici, L. venerei, and L. piau. In the case of two other MOTUs identified in the present study, one (L. venerei) is a new record for the state of Maranhão, and we believe that the other represents a population of L. piau from the basin of the Parnaíba River.

Checklist of the fish fauna of the Munim River Basin, Maranhão, north-eastern Brazil

Background

The Maranhão State harbours great fish diversity, but some areas are still undersampled or little known, such as the Munim River Basin in the northeast of the State. This lack of knowledge is critical when considering anthropogenic impacts on riverine systems especially in the face of major habitat destruction. These pressing threats mean that a comprehensive understanding of diversity is critical and fish checklists extremely relevant. Therefore, the present study provides a checklist of the fish species found in the Munim River Basin, Maranhão State, north-eastern Brazil, based on collected specimens.

New information

A total of 123 species were recorded for the Munim River Basin, with only two non-native species, Oreochromisniloticus and Colossomamacropomum, showing that the fish assemblage has relatively high ecological integrity. In addition, 29 species could not be identified at the species level, indicating the presence of species that are probably new to science in the Basin. A predominance of species belonging to the fish orders Characiformes and Siluriformes, with Characidae being recovered as the most species-rich family (21 species) agrees with the general pattern for river basins in the Neotropical Region. The total fish diversity was estimated by extensive fieldwork, including several sampling gears, carried out in different seasons (dry and rainy) and exploring different environments with both daily and nocturnal sampling, from the Basin's source to its mouth. A total of 84 sites were sampled between 2010 and 2022, resulting in 12 years of fieldwork. Fish assemblages were distinct in the Estuary and Upper river basin sections and more similar in the Lower and Middle sections indicating environmental filtering processes. Species were weakly nested across basin sections, but unique species were found in each section (per Simpsons Index). High variability of species richness in the Middle river basin section is likely due to microhabitat heterogeneity supporting specialist fish communities.

New records of the occurrence of Megaleporinus macrocephalus () (Characiformes, Anostomidae) from the basins of the Itapecuru and Mearim rivers in Maranhão, Northeastern Brazil

The "piaussu", Megaleporinus macrocephalus is an anostomatid fish species native to the basin of the Paraguay River, in the Pantanal biome of western Brazil. However, this species has now been recorded in a number of other drainages, including those of the upper Paraná, Uruguay, Jacuí, Doce, Mucuri, and Paraíba do Sulrivers. This study presents two new records of the occurrence of M. macrocephalus, in the basins of the Itapecuru and Mearim rivers in the state of Maranhão, in the Brazilian Northeast. The piaussu is a large-bodied fish of commercial interest that is widely raised on fish farms, and its occurrence in the Itapecuru and Mearim rivers is likely the result of individuals escaping from fish tanks when they overflow during the rainy season. Morphological analyses and sequences of the Cytochrome Oxidase Subunit I (COI) gene confirmed the taxonomic identification of the specimens as M. macrocephalus. The COI sequences were 99.66% similar to those of M. macrocephalus deposited in the BOLDSystems database. These records extend the known distribution of M. macrocephalus to the basins of the Itapecuru and Mearim rivers in the Brazilian Northeast, highlighting a new case of introduction of exotic fish species into Brazilian river basins.

Cryptic speciation in populations of the genus Aphyocharax (Characiformes: Characidae) from eastern Amazon coastal river drainages and surroundings revealed by single locus species delimitation methods

Abstract Recent studies in eastern Amazon coastal drainages and their surroundings have revealed new fish species that sometimes exhibit little morphological differentiation (cryptic species). Thus, we used a DNA-based species delimitation approach to test if populations showing the morphotype and typical character states of the Aphyocharax avary holotype correspond either to A. avary or A. brevicaudatus, two known species from the region, or if they form independent lineages, indicating cryptic speciation. WP and GMYC analyses recovered five lineages (species) in the ingroup, while a bPTP analysis delimited three lineages. ABGD analyses produced two possible results: one corroborating the WP and GMYC methods and another corroborating the bPTP method. All methods indicate undescribed cryptic species in the region and show variation from at least 1 to 4 species in the ingroup, depending on the approach, corroborating previous studies, and revealing this region as a possible hotspot for discovering undescribed fish species.

Ichthyofauna of the Mata de Itamacaoca, an urban protected area from the upper Munim River basin, Northern Brazilian Cerrado

Abstract: The Munim River basin is one of the main river drainages of the Hydrological unit Maranhão, but there are few published studies which focus on ichthyological surveys and taxonomic work within this basin. The present study aims to provide a fish species inventory of the Mata da Itamacaoca, one of the few urban protected areas from the upper Munim River basin, comparing the ichthyofauna with other lists by conducted at the upper Munim River basin. A total of 42 collection expeditions were conducted, the sampling was conducted at five collecting sites distributed within the boundaries of Mata de Itamacaoca, upper Munim River basin. Diversity indices were calculated and generalised linear models (GLMs) were employed to assess differences in species richness, diversity and evenness depending on season and location in relation to the reservoir dam wall. In order to visualize fish community differences, non-metric multidimensional scaling (nMDS) and a one-way PERMANOVA was used to understand whether factors of site, season and location to the dam wall had an effect on fish community compositions. A total of six orders, 13 families, and 23 fish species were found, and the order with the highest species richness, considering all reaches, was Characiformes followed by Cichliformes. The most abundant species was Nannostomus beckfordi, while Pimelodella parnahybae and Hoplerythrinus unitaeniatus were the rarer species sampled. There were no alien invasive species collected within the study area. Species richness was significantly higher below the dam wall, but there were no other significant differences in diversity indices with regards to season or location. Fish community composition was significantly different above and below the dam wall and was significantly affected by sampling site. Season did not have an effect on fish community. This study corroborates other studies conducted in the Unidade Hidrológica Maranhão sensu Hubbert and Renno (2006), that the ichthyofaunal composition and taxonomy of species within this region face major data deficits, anthropogenic impacts, this study may be a baseline for comparing similar environments throughout the region.

Genetic differentiation through dispersal and isolation in two freshwater fish species from coastal basins of Northeastern Brazil

Abstract The coastal basins in Northeastern Brazil used in this study make up two different ecoregions for freshwater fishes (Amazonas estuary and coastal drainages, and Parnaiba) and two areas of endemism for Characiformes (Maranhão and Parnaíba), and exhibits a diversified yet poorly explored freshwater fish fauna. The population structure and biogeography of two migratory freshwater fish species that are commercially exploited from Maranhão and Parnaíba regions were herein analyzed. Molecular sequence data and statistical analyses were used to estimate haplotypes networks and lineage divergence times and correlated with hydrographic history of drainage and paleodrainages of the region. A total of 171 sequences was produced for both species, Schizodon dissimilis (coI, n = 70) and Prochilodus lacustris (D-loop, n = 101). All analyses identified the presence of three genetically delimited groups of S. dissimilis and six groups of P. lacustris. The lineage time analyses indicate diversification among these species within the past 1 million year. The results indicate the influence of geodispersal in the formation of the ichthyofauna in the studied area through headwater stream capture events and reticulated connections between the mouths of rivers along the coastal plain due to eustatic sea level fluctuations.

An inventory of Ichthyofauna of the Pindaré River drainage, Mearim River basin, Northeastern Brazil

Abstract: In the present work, we conducted an extensive long-lasting inventory of the fishes, using different collection methodologies, covering almost the entire Pindaré River drainage, one of the principal tributaries of the Mearim River basin, an area included in the Amazônia Legal region, northeastern Brazil. We reported 101 species, just three of them being non-native, demonstrating that the composition of this studied fish community is majority composed of native species. We found a predominance of species of the orders Characiformes and Siluriformes, corroborating the pattern usually found for the Neotropical fish fauna. Similar to other studies, this inventory was mainly dominated by small characids, representing 21% of the species herein recorded. When comparing the present survey with other species lists published for this region (including the States of Maranhão and Piaui), we can conclude that the freshwater fish fauna of the State of Maranhão is probably still underestimated. We reported 41 more species, and one more species than Soares (2005, 2013) and Abreu et al. (2019) recorded for the entire Mearim River basin, respectively. We believe, however, that the number of species presented by Abreu et al. (2019) is overestimated. We compared our results with all other freshwater fish species inventories performed for the hydrological units Maranhão and Parnaíba sensu Hubbert & Renno (2006). With these comparisons, we concluded that our results evidenced that a high effort was put in the inventory here presented. The two works including more species recorded from coastal river basins of the hydrological units Maranhão and Parnaíba were the works published by Ramos et al. (2014) for the Parnaíba River basin, one of the main and larger river basin of Brazil, and the compiled data published by Castro & Dourado (2011) for the Mearim, Pindaré, Pericumã, and upper Turiaçu River drainages, including 146 and 109 species, respectively. Our survey recorded only 45 less species than Ramos et al. (2014), and eight less species than Castro & Dourado (2011). However, it is essential to emphasize that the number of species presented by Castro & Dourado (2011) is probably overestimated since they did not update and check the taxonomic status of the species of their compiled data. In several cases, they considered more than one name for the same species.

Freshwater fishes of the Parque Nacional dos Lençóis Maranhenses and adjacent areas

Abstract: We present here an embracing freshwater fish inventory of the Parque Nacional dos Lençóis Maranhenses and adjacent areas, reporting 49 fish species, 33 of which were identified accurately at the species level, representing ten orders and 25 fish families that range from obligate freshwater to estuarine organisms. This number of species is much larger than two previous studies for the park, each reporting just 12 and 33 fishes occurring on freshwater environments. Among the 49 freshwater species recorded in this study, 14 are new records for the Parque Nacional dos Lençóis Maranhenses, and just one corresponds to an introduced species. Some of the 14 new records in the Parque Nacional dos Lençóis Maranhenses, cited above, as well as some of the 16 species which we are not able to identify accurately at the species level, could include undescribed species, but more study is necessary before sorting out which species are truly undescribed, and which are already described ones. The orders reported by this survey which comprise the highest percentage of species richness, excluding introduced species, were: Characiformes, Cichliformes and Siluriformes, in the same ranking position, and Gymnotiformes, as expected for Neotropical freshwater surveys. The families with the highest number of species, excluding non-native species, were: Characidae, followed by Cichlidae, and Loricariidae. Out of the 33 species herein identified accurately at the species level, five of them are species typically found in brackish water environments, and when occurring on freshwater environments, are restricted mainly to estuaries, or, occasionally, the lower portions of the rivers. Thus, we will not address them in our biogeographical comments. From the remaining 28 species, eight did not occur in the Amazon River basin, six of them being endemic to the Maranhão-Piauí ecoregion. The remaining species herein reported also have their distribution recorded for the Amazon River basin, which shows the great influence of the Amazon basin. In the last two decades efforts to inventory the freshwater fish fauna and to taxonomically solve some groups occurring on the Maranhão state have been made. However the knowledge regarding the composition of the Maranhão freshwater fishes is still insufficient and underestimated, with several groups still lacking adequate taxonomic and systematic resolution, and with many gaps of knowledge, something that is not appropriate for our current picture of "biodiversity crisis". As well as, the other Brazilian protected areas, the PNLM fails to preserve its freshwater environment properly, since it includes only fragments of the major river systems of the area, not including and conserving the hole river drainages, mainly excluding their headwaters. Thus, its water bodies are exposed to typical human impacts.

Historical biogeography of fishes from coastal basins of Maranhão State, northeastern Brazil

ABSTRACT The Amazonian ichthyofauna is one of the most diverse in the world, yet fishes from the adjacent coastal basins of Maranhão State in Northeastern Brazil remain poorly known. We use phylogeographic, community phylogenetic and phylogenetic beta diversity methods to study the biogeographic history of fishes from the coastal basins of Maranhão State. We report a total of 160 fish species from the basins of the Maranhão region, representing a 93% increase over results of previous studies. All the fish species assemblages from Maranhão are polyphyletic, with only a few putative sister species pairs inhabiting the region. The modern watershed divides among Maranhão basins do not form substantial barriers to dispersal for freshwater fish species, and are more effectively modelled as biogeographic islands than as biogeographic provinces. In combination these results suggest that the Maranhão ichthyofauna was assembled under the influence of several macroevolutionary (extinction, dispersal) and landscape evolution processes, during the Miocene and Pliocene, as well as by the modern ecological characteristics of the region. The results indicate that the distinctive geological and climatic conditions and history of Northeastern Brazil strongly constrained the formation of aquatic faunas in coastal basins of Maranhão State.

Updated checklist and DNA barcode-based species delimitations reveal taxonomic uncertainties among freshwater fishes from the mid-north-eastern Caatinga ecoregion, north-eastern Brazil

The mid-north-eastern Caatinga is a semiarid freshwater ecoregion in North-eastern Brazil that is dominated by temporary rivers and is currently classified as one of the least ichthyologically-known ecoregions in the world. The present study aimed to provide an updated checklist of mid-north-eastern Caatinga ecoregion (MNCE) freshwater fish species and evaluate their taxonomic identity using morphology, DNA barcoding and multiple species delimitation approaches. After reviewing published studies and ichthyological collections, 119 species were identified. Among these were 94 putatively valid native and 14 non-native species, five undescribed native species, four new records for the MNCE, 11 potential cases of misidentification and 14 species listed as inquirenda. Additionally, 252 individuals from 49 species were barcoded, revealing three potential taxonomic synonyms. The combined molecular approaches estimated a total of 91 native species, although a finalized species list for the MNCE awaits additional taxonomic revisions and field surveys. This study provides the most up-to-date species checklist for the MNCE and a molecular reference database for identifying MNCE fishes with DNA barcodes. Results highlight the need to integrate traditional taxonomy with molecular approaches to correctly identify species, especially in taxonomically problematic ecoregions such as the MNCE.

P, Barros-Neto LF, Lima SMQ. Redescription of the endangered hypoptopomatine catfish Parotocinclus spilurus (Fowler, 1941) (Siluriformes: Loricariidae) from the upper rio Jaguaribe basin, northeastern Brazil

Abstract Parotocinclus spilurus (Fowler) was originally described as a species of Plecostomus based on six specimens collected in the rio Salgado, Icó Municipality, Ceará State, northeastern Brazil. Because the original description of P. spilurus is brief and uninformative, a detailed redescription of this endangered species based on the type series and on freshly collected topotypes was made. Data on osteology, intraspecific variation, sexual dimorphism and color pattern in life are presented for the first time, aiming at providing the necessary characters to differentiate the species from its congeners, as well as providing data on the distribution, habitat and conservation.