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Shan R, Feng G, Lin Y, Ma Z. Temporal stability of forest productivity declines over stand age at multiple spatial scales. Nat Commun 2025; 16:2745. [PMID: 40113748 PMCID: PMC11926224 DOI: 10.1038/s41467-025-57984-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2024] [Accepted: 03/10/2025] [Indexed: 03/22/2025] Open
Abstract
There is compelling experimental evidence and theoretical predictions that temporal stability of productivity, i.e., the summation of aboveground biomass growth of surviving and recruitment trees, increases with succession. However, the temporal change in productivity stability in natural forests, which may undergo functional diversity loss during canopy transition, remains unclear. Here, we use the forest inventory dataset across the eastern United States to explore how the temporal stability of forest productivity at multi-spatial scales changes with stand age during canopy transition. We find that productivity stability decreases with stand age at the local and metacommunity scales. Specifically, consistent declines in local diversity result in less asynchronous productivity dynamics among species over succession, consequently weakening local stability. Meanwhile, increasing mortality and the transition from conservative to acquisitive species with succession weaken species and local stability. Successional increases in species composition dissimilarity among local communities cause more asynchronous productivity dynamics among local communities. However, the decline in local stability surpasses the rise in asynchronous productivity dynamics among local communities, resulting in lower metacommunity stability in old forests. Our results suggest lower productivity stability in old-growth forests and highlight the urgency of protecting diversity at multiple spatial scales to maintain productivity stability.
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Affiliation(s)
- Rongxu Shan
- School of Ecology, Shenzhen Campus of Sun Yat-sen University, Guangdong, 518107, China
| | - Ganxin Feng
- School of Ecology, Shenzhen Campus of Sun Yat-sen University, Guangdong, 518107, China
| | - Yuwei Lin
- Shapotou Desert Research and Experiment Station, Northwest Institute of Eco-environment and Resource Research, Chinese Academy of Sciences, Lanzhou, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Zilong Ma
- School of Ecology, Shenzhen Campus of Sun Yat-sen University, Guangdong, 518107, China.
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2
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Buttò V, Peltier DMP, Rademacher T. From division to 'divergence': to understand wood growth across timescales, we need to (learn to) manipulate it. THE NEW PHYTOLOGIST 2025; 245:2393-2401. [PMID: 39801020 DOI: 10.1111/nph.20390] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2024] [Accepted: 12/18/2024] [Indexed: 02/21/2025]
Abstract
Wood formation is the Rosetta stone of tree physiology: a traceable, integrated record of physiological and morphological status. It also produces a large and persistent annual sink for terrestrial carbon, motivating predictive understanding. Xylogenesis studies have greatly expanded our knowledge of the intra-annual controls on wood formation, while dendroecology has quantified the environmental drivers of multi-annual variability. But these fields operate on different timescales, making it challenging to predict how short (e.g. turgor) and long timescale processes (e.g. disturbance) interactively influence wood formation. Toward this challenge, wood growth responses to natural climate events provide useful but incomplete explanations of tree growth variability. By contrast, direct manipulations of the tree vascular system have yielded unexpected insights, particularly outside of model species like boreal conifers, but they remain underutilized. To improve prediction of global wood formation, we argue for a new generation of experimental manipulations of wood growth across seasons, species, and ecosystems. Such manipulations should expand inference to diverse forests and capture inter- and intra-specific differences in wood growth. We summarize the endogenous and exogenous factors influencing wood formation to guide future experimental design and hypotheses. We highlight key opportunities for manipulative studies integrating measurements from xylogenesis, dendroanatomy, dendroecology, and ecophysiology.
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Affiliation(s)
- Valentina Buttò
- Institut de recherche sur les forêts (IRF), Université du Québec en Abitibi-Témiscamingue, Rouyn-Noranda, QC, J9X 5E4, Canada
| | - Drew M P Peltier
- School of Life Sciences, University of Nevada, Las Vegas, NV, 89154, USA
| | - Tim Rademacher
- Department of Plant Biology, University of Vermont, Burlington, VT, 05405, USA
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3
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Kirakosyan RN, Kalasnikova EA, Bolotina EA, Saleh A, Balakina AA, Zaytseva SM. Localization of Secondary Metabolites in Relict Gymnosperms of the Genus Sequoia In Vivo and in Cell Cultures In Vitro, and the Biological Activity of Their Extracts. Life (Basel) 2024; 14:1694. [PMID: 39768400 PMCID: PMC11680049 DOI: 10.3390/life14121694] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2024] [Revised: 12/15/2024] [Accepted: 12/17/2024] [Indexed: 01/11/2025] Open
Abstract
In order to scientifically search for new sources of secondary metabolites with valuable qualities for phytopharmacognosy, tasks requiring a step-by-step solution were set. The primary task is the development of technologies for obtaining in vitro highly productive biomass of cells of relict gymnosperms of the genus Sequoia, capable of accumulating various classes of secondary metabolites. The study of the accumulation and localization of secondary metabolites allowed us to evaluate the biological activity and cytotoxicity of in vitro Sequoia cultures. In our study, histochemical methods were used to determine the localization of secondary compounds (phenolic and terpenoid in nature) in plant tissues. Secondary metabolites-polyphenols, catechins, and terpenoids-are mainly localized in the epidermal, parenchymal, and conductive tissues of Sequoia leaves and stems. In callus and suspension cultures of Sequoia, secondary metabolites were localized in cell walls and vacuoles. The mineral composition of the nutrient medium (MS and WPM), the light source (photoperiod), and the endogenous content of polyphenols in the primary explant influenced the initiation and growth characteristics of the in vitro culture of Sequoia plants. Inhibition of growth in suspension cultures on the WPM nutrient medium was noted. The cultivation of Sequoia cell lines at a 16 h photoperiod stimulated the formation of polyphenols but had a negative effect on the growth of callus cultures. Extractive substances obtained from intact and callus tissues of evergreen Sequoia demonstrate high biological (fungicidal) activity and cytotoxicity. The inhibitory effect on Fusarium oxisporum was noted when 200 mg/L of Sequoia extract was added to the nutrient medium. Extracts of redwood callus cultures were low in toxicity to normal FetMSC cells but inhibited the growth of lines of "immortal" cervical HeLa cancer cells and human glioblastoma A172. Intact tissues of Sequoia plants and cell cultures initiated from them in vitro are producers of secondary metabolites with high biological activity.
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Affiliation(s)
- Rima N. Kirakosyan
- Department of Biotechnology, Russian State Agrarian University—Moscow Timiryazev Agricultural Academy, Timiryazevskaya Street 49, Moscow 127434, Russia; (E.A.K.); (E.A.B.); (A.S.)
| | - Elena A. Kalasnikova
- Department of Biotechnology, Russian State Agrarian University—Moscow Timiryazev Agricultural Academy, Timiryazevskaya Street 49, Moscow 127434, Russia; (E.A.K.); (E.A.B.); (A.S.)
| | - Elizaveta A. Bolotina
- Department of Biotechnology, Russian State Agrarian University—Moscow Timiryazev Agricultural Academy, Timiryazevskaya Street 49, Moscow 127434, Russia; (E.A.K.); (E.A.B.); (A.S.)
| | - Abdulrahman Saleh
- Department of Biotechnology, Russian State Agrarian University—Moscow Timiryazev Agricultural Academy, Timiryazevskaya Street 49, Moscow 127434, Russia; (E.A.K.); (E.A.B.); (A.S.)
| | - Anastasiya A. Balakina
- Federal Research Center of Problems of Chemical Physics and Medicinal Chemistry, Russian Academy of Science, Ac. Semenov Avenue 1, Moscow Region, Chernogolovka, Moscow 142432, Russia;
| | - Svetlana M. Zaytseva
- Department of Biotechnology, Russian State Agrarian University—Moscow Timiryazev Agricultural Academy, Timiryazevskaya Street 49, Moscow 127434, Russia; (E.A.K.); (E.A.B.); (A.S.)
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4
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Foote NE, Foote GG, Comai N, Ibarra Caballero JR, Stewart JE, Ambrose AR, Baxter WL, Davis TS. Patterns of occurrence, phenology, and phylogeny of Phloeosinus punctatus LeConte (Coleoptera: Curculionidae, Scolytinae) in giant sequoia. ENVIRONMENTAL ENTOMOLOGY 2024; 53:1183-1196. [PMID: 39331360 DOI: 10.1093/ee/nvae089] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2024] [Revised: 08/09/2024] [Accepted: 09/09/2024] [Indexed: 09/28/2024]
Abstract
Here, we describe patterns of reproduction and flight phenology of putative Phloeosinus punctatus in giant sequoia groves and compare morphology and genotypes of beetles from sympatric giant sequoia (Sequoiadendron giganteum) and California incense-cedar (Calocedrus decurrens). Surveys conducted in 2022 revealed that numerous branches fall from giant sequoia crowns (on average ~30 branches/tree), with 20%-50% of trees per site shedding branches, depositing breeding material for beetles on the forest floor that subsequently becomes colonized. When noninfested branches cut from mature giant sequoias were placed at the ground surface, they were colonized by P. punctatus and produced an average of 28 beetles/kg branch. Climbing and examination of sequoia crowns in 2023 showed that 75% of mature trees across 11 groves showed evidence of adult beetle entrance holes in their crowns. In 2021, tests with sticky traps showed that beetles alighted on fallen branches from 20th May to 20th August (peak landing: 2nd July); a logistic model developed from emergence data in 2021 and 2022 predicts the emergence of F1 offspring from branches between 10th July and 1st September (peak emergence: 8th August). Beetles emerging from giant sequoia preferred to settle on giant sequoia, did not reproduce in incense-cedar, and diverged morphologically from beetles emerging from incense-cedar. However, phylogenetic analysis of three genes (28S, CAD, and COI) revealed no clear pattern of sequence divergence, suggesting a single species (P. punctatus) that colonizes both hosts, though cryptic speciation may not be detectable with standard barcoding genes. Ecological and potential management implications are discussed.
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Affiliation(s)
- Nathaniel E Foote
- Forest & Rangeland Stewardship, Warner College of Natural Resources, Colorado State University, Fort Collins, CO, USA
| | - Gabriel G Foote
- Department of Entomology and Nematology, University of California, Davis, Davis, CA, USA
| | - Nathan Comai
- Forest & Rangeland Stewardship, Warner College of Natural Resources, Colorado State University, Fort Collins, CO, USA
| | - Jorge R Ibarra Caballero
- Agricultural Biology, College of Agricultural Science, Colorado State University, Fort Collins, CO, USA
| | - Jane E Stewart
- Agricultural Biology, College of Agricultural Science, Colorado State University, Fort Collins, CO, USA
- Graduate Degree Program in Ecology, Colorado State University, Fort Collins, CO, USA
| | | | | | - Thomas S Davis
- Forest & Rangeland Stewardship, Warner College of Natural Resources, Colorado State University, Fort Collins, CO, USA
- Graduate Degree Program in Ecology, Colorado State University, Fort Collins, CO, USA
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5
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Holland R, Castro G, Chavana-Bryant C, Levy R, Moat J, Robson T, Wilkinson T, Wilkes P, Yang W, Disney M. Giant sequoia ( Sequoiadendron giganteum) in the UK: carbon storage potential and growth rates. ROYAL SOCIETY OPEN SCIENCE 2024; 11:230603. [PMID: 38481981 PMCID: PMC10933539 DOI: 10.1098/rsos.230603] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/10/2023] [Revised: 07/21/2023] [Accepted: 02/13/2024] [Indexed: 04/26/2024]
Abstract
Giant sequoias (Sequoiadendron giganteum) are some of the UK's largest trees, despite only being introduced in the mid-nineteenth century. There are an estimated half a million giant sequoias and closely related coastal redwoods (Sequoia sempervirens) in the UK. Given the recent interest in planting more trees, partly due to their carbon sequestration potential and also their undoubted public appeal, an understanding of their growth capability is important. However, little is known about their growth and carbon uptake under UK conditions. Here, we focus on S. giganteum and use three-dimensional terrestrial laser scanning to perform detailed structural measurements of 97 individuals at three sites covering a range of different conditions, to estimate aboveground biomass (AGB) and annual biomass accumulation rates. We show that UK-grown S. giganteum can sequester carbon at a rate of 85 kg yr-1, varying with climate, management and age. We develop new UK-specific allometric models for S. giganteum that fit the observed AGB with r 2 > 0.93 and bias < 2% and can be used to estimate S. giganteum biomass more generally. This study provides the first estimate of the growth and carbon sequestration of UK open-grown S. giganteum and provides a baseline for estimating their longer-term carbon sequestration capacity.
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Affiliation(s)
- Ross Holland
- East Point Geo, Ashgrove House, Monument Park, ChalgroveOX44 7RW, UK
- Department of Geography, University College London, Gower Street, LondonWC1E 6BT, UK
| | | | | | - Ron Levy
- Independent Researcher, RayleighSS6 9HB, UK
| | - Justin Moat
- Royal Botanic Gardens, Kew, RichmondTW9 3AE, UK
| | | | | | - Phil Wilkes
- Department of Geography, University College London, Gower Street, LondonWC1E 6BT, UK
- Department of Geography, NERC NCEO, University College London, Gower Street, LondonWC1E 6BT, UK
| | - Wanxin Yang
- Department of Geography, University College London, Gower Street, LondonWC1E 6BT, UK
- Department of Geography, NERC NCEO, University College London, Gower Street, LondonWC1E 6BT, UK
| | - Mathias Disney
- Department of Geography, University College London, Gower Street, LondonWC1E 6BT, UK
- Department of Geography, NERC NCEO, University College London, Gower Street, LondonWC1E 6BT, UK
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6
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Gajendiran K, Kandasamy S, Narayanan M. Influences of wildfire on the forest ecosystem and climate change: A comprehensive study. ENVIRONMENTAL RESEARCH 2024; 240:117537. [PMID: 37914016 DOI: 10.1016/j.envres.2023.117537] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Revised: 09/23/2023] [Accepted: 10/27/2023] [Indexed: 11/03/2023]
Abstract
Wildfires have complex impacts on forests, including changes in vegetation, threats to biodiversity, and emissions of greenhouse gases like carbon dioxide, which exacerbate climate change. The influence of wildfires on animal habitats is particularly noteworthy, as they can lead to significant changes in native environments. The extent of these alterations in species and habitats plays a crucial role in shaping forest ecology. Drought, disease, insect infestations, overgrazing, or their combined effects can amplify the negative effects on specific plant genera and entire ecosystems. In addition to the immediate consequences of plant mortality and altered community dynamics, forest fires have far-reaching implications. They often increase flowering and seed production, further influencing ecological communities. However, one concerning trend is the decline in the diversity of forest biological species within fire-affected areas. Beyond their ecological impacts, wildfires emit substantial quantities of greenhouse gases and fine particulates into the atmosphere, triggering profound changes in climate patterns and contributing to global warming. As vegetation burns during these fires, the carbon stored within is released, rendering large forest fires detrimental to biodiversity and the emission of CO2, a significant contributor to global warming. Measuring the global impact of wildfires on ecological communities and greenhouse gas emissions has become increasingly vital. These research endeavors shed light on the intricate relationships and feedback loops linking wildfires, ecosystem inhabitants, and the evolving climate landscape.
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Affiliation(s)
- Kandasamy Gajendiran
- Department of Microbiology, M.G.R. College of Arts and Science, Hosur, Krishnagiri, Tamil Nadu, India
| | - Sabariswaran Kandasamy
- Department of Biotechnology, PSGR Krishnammal College for Women, Peelamedu, Coimbatore, 641004, India
| | - Mathiyazhagan Narayanan
- Division of Research and Innovations, Department of Biotechnology, Saveetha School of Engineering, Saveetha Institute of Medical and Technical Science, Chennai, 602105, Tamil Nadu, India.
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7
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Peltier DMP, Carbone MS, Enright M, Marshall MC, Trowbridge AM, LeMoine J, Koch G, Richardson AD. Old reserves and ancient buds fuel regrowth of coast redwood after catastrophic fire. NATURE PLANTS 2023; 9:1978-1985. [PMID: 38036621 DOI: 10.1038/s41477-023-01581-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Accepted: 11/01/2023] [Indexed: 12/02/2023]
Abstract
For long-lived organisms, investment in insurance strategies such as reserve energy storage can enable resilience to resource deficits, stress or catastrophic disturbance. Recent fire in California damaged coast redwood (Sequoia sempervirens) groves, consuming all foliage on some of the tallest and oldest trees on Earth. Burned trees recovered through resprouting from roots, trunk and branches, necessarily supported by nonstructural carbon reserves. Nonstructural carbon reserves can be many years old, but direct use of old carbon has rarely been documented and never in such large, old trees. We found some sprouts contained the oldest carbon ever observed to be remobilized for growth. For certain trees, simulations estimate up to half of sprout carbon was acquired in photosynthesis more than 57 years prior, and direct observations in sapwood show trees can access reserves at least as old. Sprouts also emerged from ancient buds-dormant under bark for centuries. For organisms with millennial lifespans, traits enabling survival of infrequent but catastrophic events may represent an important energy sink. Remobilization of decades-old photosynthate after disturbance demonstrates substantial amounts of nonstructural carbon within ancient trees cycles on slow, multidecadal timescales.
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Affiliation(s)
- Drew M P Peltier
- Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, AZ, USA.
| | - Mariah S Carbone
- Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, AZ, USA
| | - Melissa Enright
- Pacific Northwest Research Station, US Forest Service, Portland, OR, USA
| | - Margaret C Marshall
- Department of Forest and Wildlife Ecology, University of Wisconsin-Madison, Madison, WI, USA
| | - Amy M Trowbridge
- Department of Forest and Wildlife Ecology, University of Wisconsin-Madison, Madison, WI, USA
| | - Jim LeMoine
- Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, AZ, USA
| | - George Koch
- Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, AZ, USA
| | - Andrew D Richardson
- Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, AZ, USA
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Fu F, Song C, Wen C, Yang L, Guo Y, Yang X, Shu Z, Li X, Feng Y, Liu B, Sun M, Zhong Y, Chen L, Niu Y, Chen J, Wang G, Yin T, Chen S, Xue L, Cao F. The Metasequoia genome and evolutionary relationships among redwoods. PLANT COMMUNICATIONS 2023; 4:100643. [PMID: 37381601 PMCID: PMC10775903 DOI: 10.1016/j.xplc.2023.100643] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2022] [Revised: 06/11/2023] [Accepted: 06/25/2023] [Indexed: 06/30/2023]
Abstract
Redwood trees (Sequoioideae), including Metasequoia glyptostroboides (dawn redwood), Sequoiadendron giganteum (giant sequoia), and Sequoia sempervirens (coast redwood), are threatened and widely recognized iconic tree species. Genomic resources for redwood trees could provide clues to their evolutionary relationships. Here, we report the 8-Gb reference genome of M. glyptostroboides and a comparative analysis with two related species. More than 62% of the M. glyptostroboides genome is composed of repetitive sequences. Clade-specific bursts of long terminal repeat retrotransposons may have contributed to genomic differentiation in the three species. The chromosomal synteny between M. glyptostroboides and S. giganteum is extremely high, whereas there has been significant chromosome reorganization in S. sempervirens. Phylogenetic analysis of marker genes indicates that S. sempervirens is an autopolyploid, and more than 48% of the gene trees are incongruent with the species tree. Results of multiple analyses suggest that incomplete lineage sorting (ILS) rather than hybridization explains the inconsistent phylogeny, indicating that genetic variation among redwoods may be due to random retention of polymorphisms in ancestral populations. Functional analysis of ortholog groups indicates that gene families of ion channels, tannin biosynthesis enzymes, and transcription factors for meristem maintenance have expanded in S. giganteum and S. sempervirens, which is consistent with their extreme height. As a wetland-tolerant species, M. glyptostroboides shows a transcriptional response to flooding stress that is conserved with that of analyzed angiosperm species. Our study offers insights into redwood evolution and adaptation and provides genomic resources to aid in their conservation and management.
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Affiliation(s)
- Fangfang Fu
- State Key Laboratory of Tree Genetics and Breeding, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China
| | - Chi Song
- Institute of Herbgenomics, Chengdu University of Traditional Chinese Medicine, Chengdu 611137, China; Wuhan Benagen Technology Company Limited, Wuhan 430000, China
| | - Chengjin Wen
- State Key Laboratory of Tree Genetics and Breeding, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China
| | - Lulu Yang
- Wuhan Benagen Technology Company Limited, Wuhan 430000, China
| | - Ying Guo
- State Key Laboratory of Tree Genetics and Breeding, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China
| | - Xiaoming Yang
- State Key Laboratory of Tree Genetics and Breeding, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China
| | - Ziqiang Shu
- Wuhan Benagen Technology Company Limited, Wuhan 430000, China
| | - Xiaodong Li
- Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China
| | - Yangfan Feng
- State Key Laboratory of Tree Genetics and Breeding, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China
| | - Bingshuang Liu
- State Key Laboratory of Tree Genetics and Breeding, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China
| | - Mingsheng Sun
- State Key Laboratory of Tree Genetics and Breeding, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China
| | - Yinxiao Zhong
- State Key Laboratory of Tree Genetics and Breeding, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China
| | - Li Chen
- State Key Laboratory of Tree Genetics and Breeding, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China
| | - Yan Niu
- Wuhan Benagen Technology Company Limited, Wuhan 430000, China
| | - Jie Chen
- Wuhan Benagen Technology Company Limited, Wuhan 430000, China
| | - Guibin Wang
- State Key Laboratory of Tree Genetics and Breeding, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China
| | - Tongming Yin
- State Key Laboratory of Tree Genetics and Breeding, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China.
| | - Shilin Chen
- China Academy of Chinese Medical Sciences, Institute of Chinese Materia Medica, Beijing 100070, China.
| | - Liangjiao Xue
- State Key Laboratory of Tree Genetics and Breeding, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China.
| | - Fuliang Cao
- State Key Laboratory of Tree Genetics and Breeding, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China.
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9
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Scipioni MC, Higuchi P, Fockink GD, Allen CD. Old‐growth structural attributes associated with the last giant subtropical conifers in South America. AUSTRAL ECOL 2022. [DOI: 10.1111/aec.13212] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Affiliation(s)
- Marcelo Callegari Scipioni
- Department of Agriculture, Biodiversity and Forestry Federal University of Santa Catarina Curitibanos Brazil
| | - Pedro Higuchi
- Department of Forestry State University of Santa Catarina Lages Brazil
| | | | - Craig D. Allen
- Department of Geography and Environmental Studies University of New Mexico Albuquerque New Mexico USA
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10
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Chin ARO, Guzmán‐Delgado P, Sillett SC, Orozco J, Kramer RD, Kerhoulas LP, Moore ZJ, Reed M, Zwieniecki MA. Shoot dimorphism enables Sequoia sempervirens to separate requirements for foliar water uptake and photosynthesis. AMERICAN JOURNAL OF BOTANY 2022; 109:564-579. [PMID: 35274309 PMCID: PMC9322557 DOI: 10.1002/ajb2.1841] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/05/2022] [Revised: 03/04/2022] [Accepted: 03/04/2022] [Indexed: 05/11/2023]
Abstract
PREMISE Trees in wet forests often have features that prevent water films from covering stomata and inhibiting gas exchange, while many trees in drier environments use foliar water uptake to reduce water stress. In forests with both wet and dry seasons, evergreen trees would benefit from producing leaves capable of balancing rainy-season photosynthesis with summertime water absorption. METHODS Using samples collected from across the vertical gradient in tall redwood (Sequoia sempervirens) crowns, we estimated tree-level foliar water uptake and employed physics-based causative modeling to identify key functional traits that determine uptake potential by setting hydraulic resistance. RESULTS We showed that Sequoia has two functionally distinct shoot morphotypes. While most shoots specialize in photosynthesis, the axial shoot type is capable of much greater foliar water uptake, and its within-crown distribution varies with latitude. A suite of leaf surface traits cause hydraulic resistance, leading to variation in uptake capacity among samples. CONCLUSIONS Shoot dimorphism gives tall Sequoia trees the capacity to absorb up to 48 kg H2 O h-1 during the first hour of leaf wetting, ameliorating water stress while presumably maintaining high photosynthetic capacity year round. Geographic variation in shoot dimorphism suggests that plasticity in shoot-type distribution and leaf surface traits helps Sequoia maintain a dominate presence in both wet and dry forests.
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Affiliation(s)
- Alana R. O. Chin
- Plant Sciences DepartmentUniversity of California DavisDavisCA95616USA
- Present address:
Alana R. O. Chin, D‐USYS, ETHZürich8092Switzerland
| | | | - Stephen C. Sillett
- Department of Forestry and Wildland ResourcesHumboldt State UniversityArcataCA95521USA
| | - Jessica Orozco
- Plant Sciences DepartmentUniversity of California DavisDavisCA95616USA
| | | | - Lucy P. Kerhoulas
- Department of Forestry and Wildland ResourcesHumboldt State UniversityArcataCA95521USA
| | - Zane J. Moore
- Plant Sciences DepartmentUniversity of California DavisDavisCA95616USA
| | - Marty Reed
- Department of Biological SciencesHumboldt State UniversityArcataCA95521USA
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11
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De La Torre AR, Sekhwal MK, Puiu D, Salzberg SL, Scott AD, Allen B, Neale DB, Chin ARO, Buckley TN. Genome-wide association identifies candidate genes for drought tolerance in coast redwood and giant sequoia. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2022; 109:7-22. [PMID: 34800071 PMCID: PMC10773529 DOI: 10.1111/tpj.15592] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2021] [Revised: 11/05/2021] [Accepted: 11/16/2021] [Indexed: 06/13/2023]
Abstract
Drought is a major limitation for survival and growth in plants. With more frequent and severe drought episodes occurring due to climate change, it is imperative to understand the genomic and physiological basis of drought tolerance to be able to predict how species will respond in the future. In this study, univariate and multitrait multivariate genome-wide association study methods were used to identify candidate genes in two iconic and ecosystem-dominating species of the western USA, coast redwood and giant sequoia, using 10 drought-related physiological and anatomical traits and genome-wide sequence-capture single nucleotide polymorphisms. Population-level phenotypic variation was found in carbon isotope discrimination, osmotic pressure at full turgor, xylem hydraulic diameter, and total area of transporting fibers in both species. Our study identified new 78 new marker × trait associations in coast redwood and six in giant sequoia, with genes involved in a range of metabolic, stress, and signaling pathways, among other functions. This study contributes to a better understanding of the genomic basis of drought tolerance in long-generation conifers and helps guide current and future conservation efforts in the species.
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Affiliation(s)
- Amanda R. De La Torre
- School of Forestry, Northern Arizona University, 200 E. Pine Knoll, Flagstaff, AZ 86011, USA
| | - Manoj K. Sekhwal
- School of Forestry, Northern Arizona University, 200 E. Pine Knoll, Flagstaff, AZ 86011, USA
| | - Daniela Puiu
- Department of Biomedical Engineering, Computer Science and Biostatistics & Center for Computational Biology, John Hopkins University, 3100 Wyman Park Dr, Wyman Park Building, Room S220, Baltimore, MD 21211, USA
| | - Steven L. Salzberg
- Department of Biomedical Engineering, Computer Science and Biostatistics & Center for Computational Biology, John Hopkins University, 3100 Wyman Park Dr, Wyman Park Building, Room S220, Baltimore, MD 21211, USA
| | - Alison D. Scott
- Department of Plant Sciences, University of California, Davis, One Shields Avenue, Davis, CA 95616, USA
| | - Brian Allen
- Department of Plant Sciences, University of California, Davis, One Shields Avenue, Davis, CA 95616, USA
| | - David B. Neale
- Department of Plant Sciences, University of California, Davis, One Shields Avenue, Davis, CA 95616, USA
| | - Alana R. O. Chin
- Department of Plant Sciences, University of California, Davis, One Shields Avenue, Davis, CA 95616, USA
| | - Thomas N. Buckley
- Department of Plant Sciences, University of California, Davis, One Shields Avenue, Davis, CA 95616, USA
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12
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Williams CB, Reese Næsborg R, Ambrose AR, Baxter WL, Koch GW, Dawson TE. The dynamics of stem water storage in the tops of Earth's largest trees-Sequoiadendron giganteum. TREE PHYSIOLOGY 2021; 41:2262-2278. [PMID: 34104960 DOI: 10.1093/treephys/tpab078] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/04/2020] [Accepted: 05/31/2021] [Indexed: 06/12/2023]
Abstract
Water stored in tree stems (i.e., trunks and branches) is an important contributor to transpiration that can improve photosynthetic carbon gain and reduce the probability of cavitation. However, in tall trees, the capacity to store water may decline with height because of chronically low water potentials associated with the gravitational potential gradient. We quantified the importance of elastic stem water storage in the top 5-6 m of large (4.2-5.0 m diameter at breast height, 82.1-86.3 m tall) Sequoiadendron giganteum (Lindley) J. Buchholz (giant sequoia) trees using a combination of architectural measurements and automated sensors that monitored summertime diel rhythms in sap flow, stem diameter and water potential. Stem water storage contributed 1.5-1.8% of water transpired at the tree tops, and hydraulic capacitance ranged from 2.6 to 4.1 l MPa-1 m-3. These values, which are considerably smaller than reported for shorter trees, may be associated with persistently low water potentials imposed by gravity and could indicate a trend of decreasing water storage dynamics with height in tree. Branch diameter contraction and expansion consistently and substantially lagged behind fluxes in water potential and sap flow, which occurred in sync. This lag suggests that the inner bark, which consists mostly of live secondary phloem tissue, was an important hydraulic capacitor, and that hydraulic resistance between xylem and phloem retards water transfer between these tissues. We also measured tree-base sap flux, which lagged behind that measured in trunks near the tree tops, indicating additional storage in the large trunks between these measurement positions. Whole-tree sap flow ranged from 2227 to 3752 l day-1, corroborating previous records for similar-sized giant sequoia and representing the largest yet reported for any individual tree. Despite such extraordinarily high daily water use, we estimate that water stored in tree-top stems contributes minimally to transpiration on typical summer days.
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Affiliation(s)
- Cameron B Williams
- Department of Integrative Biology, University of California, Berkeley, CA 94720, USA
- Channel Islands National Park, Ventura, CA 93001, USA
- Santa Barbara Botanic Garden, Santa Barbara, CA 93105, USA
| | - Rikke Reese Næsborg
- Department of Integrative Biology, University of California, Berkeley, CA 94720, USA
- Santa Barbara Botanic Garden, Santa Barbara, CA 93105, USA
| | - Anthony R Ambrose
- Department of Integrative Biology, University of California, Berkeley, CA 94720, USA
- The Marmot Society, South Lake Tahoe, CA 96150, USA
| | - Wendy L Baxter
- Department of Integrative Biology, University of California, Berkeley, CA 94720, USA
- The Marmot Society, South Lake Tahoe, CA 96150, USA
| | - George W Koch
- Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, AZ 86011, USA
| | - Todd E Dawson
- Department of Integrative Biology, University of California, Berkeley, CA 94720, USA
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13
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Wilkes P, Shenkin A, Disney M, Malhi Y, Bentley LP, Vicari MB. Terrestrial laser scanning to reconstruct branch architecture from harvested branches. Methods Ecol Evol 2021. [DOI: 10.1111/2041-210x.13709] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Phil Wilkes
- Department of Geography University College London London UK
- NERC National Centre for Earth Observation Leicester UK
| | - Alexander Shenkin
- Environmental Change Institute School of Geography and Environment University of Oxford Oxford UK
| | - Mathias Disney
- Department of Geography University College London London UK
- NERC National Centre for Earth Observation Leicester UK
| | - Yadvinder Malhi
- Environmental Change Institute School of Geography and Environment University of Oxford Oxford UK
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14
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De La Torre AR, Sekhwal MK, Neale DB. Selective Sweeps and Polygenic Adaptation Drive Local Adaptation along Moisture and Temperature Gradients in Natural Populations of Coast Redwood and Giant Sequoia. Genes (Basel) 2021; 12:1826. [PMID: 34828432 PMCID: PMC8621000 DOI: 10.3390/genes12111826] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2021] [Revised: 11/18/2021] [Accepted: 11/18/2021] [Indexed: 12/26/2022] Open
Abstract
Dissecting the genomic basis of local adaptation is a major goal in evolutionary biology and conservation science. Rapid changes in the climate pose significant challenges to the survival of natural populations, and the genomic basis of long-generation plant species is still poorly understood. Here, we investigated genome-wide climate adaptation in giant sequoia and coast redwood, two iconic and ecologically important tree species. We used a combination of univariate and multivariate genotype-environment association methods and a selective sweep analysis using non-overlapping sliding windows. We identified genomic regions of potential adaptive importance, showing strong associations to moisture variables and mean annual temperature. Our results found a complex architecture of climate adaptation in the species, with genomic regions showing signatures of selective sweeps, polygenic adaptation, or a combination of both, suggesting recent or ongoing climate adaptation along moisture and temperature gradients in giant sequoia and coast redwood. The results of this study provide a first step toward identifying genomic regions of adaptive significance in the species and will provide information to guide management and conservation strategies that seek to maximize adaptive potential in the face of climate change.
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Affiliation(s)
- Amanda R. De La Torre
- School of Forestry, Northern Arizona University, 200 E. Pine Knoll, Flagstaff, AZ 86011, USA;
| | - Manoj K. Sekhwal
- School of Forestry, Northern Arizona University, 200 E. Pine Knoll, Flagstaff, AZ 86011, USA;
| | - David B. Neale
- Department of Plant Sciences, University of California-Davis, One Shields Avenue, Davis, CA 95616, USA
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15
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Qiu T, Aravena MC, Andrus R, Ascoli D, Bergeron Y, Berretti R, Bogdziewicz M, Boivin T, Bonal R, Caignard T, Calama R, Julio Camarero J, Clark CJ, Courbaud B, Delzon S, Donoso Calderon S, Farfan-Rios W, Gehring CA, Gilbert GS, Greenberg CH, Guo Q, Hille Ris Lambers J, Hoshizaki K, Ibanez I, Journé V, Kilner CL, Kobe RK, Koenig WD, Kunstler G, LaMontagne JM, Ledwon M, Lutz JA, Motta R, Myers JA, Nagel TA, Nuñez CL, Pearse IS, Piechnik Ł, Poulsen JR, Poulton-Kamakura R, Redmond MD, Reid CD, Rodman KC, Scher CL, Schmidt Van Marle H, Seget B, Sharma S, Silman M, Swenson JJ, Swift M, Uriarte M, Vacchiano G, Veblen TT, Whipple AV, Whitham TG, Wion AP, Wright SJ, Zhu K, Zimmerman JK, Żywiec M, Clark JS. Is there tree senescence? The fecundity evidence. Proc Natl Acad Sci U S A 2021; 118:e2106130118. [PMID: 34400503 PMCID: PMC8403963 DOI: 10.1073/pnas.2106130118] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Despite its importance for forest regeneration, food webs, and human economies, changes in tree fecundity with tree size and age remain largely unknown. The allometric increase with tree diameter assumed in ecological models would substantially overestimate seed contributions from large trees if fecundity eventually declines with size. Current estimates are dominated by overrepresentation of small trees in regression models. We combined global fecundity data, including a substantial representation of large trees. We compared size-fecundity relationships against traditional allometric scaling with diameter and two models based on crown architecture. All allometric models fail to describe the declining rate of increase in fecundity with diameter found for 80% of 597 species in our analysis. The strong evidence of declining fecundity, beyond what can be explained by crown architectural change, is consistent with physiological decline. A downward revision of projected fecundity of large trees can improve the next generation of forest dynamic models.
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Affiliation(s)
- Tong Qiu
- Nicholas School of the Environment, Duke University, Durham, NC 27708
| | - Marie-Claire Aravena
- Universidad de Chile, Facultad de Ciencias Forestales y de la Conservación de la Naturaleza (FCFCN), La Pintana, 8820808 Santiago, Chile
| | - Robert Andrus
- Department of Geography, University of Colorado, Boulder, CO 80309
| | - Davide Ascoli
- Department of Agriculture, Forest and Food Sciences, University of Torino, 10095 Grugliasco, TO, Italy
| | - Yves Bergeron
- Forest Research Institute, University of Quebec in Abitibi-Temiscamingue, Rouyn-Noranda, QC J9X 5E4, Canada
- Department of Biological Sciences, University of Quebec in Abitibi-Temiscamingue, Rouyn-Noranda, QC H2L 2C4, Canada
| | - Roberta Berretti
- Department of Agriculture, Forest and Food Sciences, University of Torino, 10095 Grugliasco, TO, Italy
| | - Michal Bogdziewicz
- Department of Systematic Zoology, Faculty of Biology, Adam Mickiewicz University, 61-614 Poznan, Poland
| | - Thomas Boivin
- l'Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), Ecologie des Forets Mediterranennes, 84000 Avignon, France
| | - Raul Bonal
- Department of Biodiversity, Ecology and Evolution, Complutense University of Madrid, 28040 Madrid, Spain
| | - Thomas Caignard
- Université Bordeaux, l'Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), Biodiversity, Genes, and Communities (BIOGECO), 33615 Pessac, France
| | - Rafael Calama
- Centro de Investigación Forestal - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA-CIFOR), 28040 Madrid, Spain
| | - J Julio Camarero
- Instituto Pirenaico de Ecología, Consejo Superior de Investigaciones Científicas (IPE-CSIC), 50059 Zaragoza, Spain
| | - Connie J Clark
- Nicholas School of the Environment, Duke University, Durham, NC 27708
| | - Benoit Courbaud
- Université Grenoble Alpes, l'Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), Laboratoire EcoSystémes et Sociétés En Montagne (LESSEM), 38402 St.-Martin-d'Heres, France
| | - Sylvain Delzon
- Université Bordeaux, l'Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), Biodiversity, Genes, and Communities (BIOGECO), 33615 Pessac, France
| | - Sergio Donoso Calderon
- Universidad de Chile, Facultad de Ciencias Forestales y de la Conservación de la Naturaleza (FCFCN), La Pintana, 8820808 Santiago, Chile
| | - William Farfan-Rios
- Center for Conservation and Sustainable Development, Missouri Botanical Garden, Washington University in Saint Louis, St. Louis, MO 63110
| | - Catherine A Gehring
- Department of Biological Sciences, Northern Arizona University, Flagstaff, AZ 86011
| | - Gregory S Gilbert
- Department of Environmental Studies, University of California, Santa Cruz, CA 95064
| | - Cathryn H Greenberg
- Bent Creek Experimental Forest, US Department of Agriculture Forest Service, Asheville, NC 28801
| | - Qinfeng Guo
- Eastern Forest Environmental Threat Assessment Center, US Department of Agriculture Forest Service, Research Triangle Park, NC 27709
| | - Janneke Hille Ris Lambers
- Department of Environmental Systems Science, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland
| | - Kazuhiko Hoshizaki
- Department of Biological Environment, Akita Prefectural University, Akita 010-0195, Japan
| | - Ines Ibanez
- School for Environment and Sustainability, University of Michigan, Ann Arbor, MI 48109
| | - Valentin Journé
- Université Grenoble Alpes, l'Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), Laboratoire EcoSystémes et Sociétés En Montagne (LESSEM), 38402 St.-Martin-d'Heres, France
| | | | - Richard K Kobe
- Department of Plant Biology, Program in Ecology, Evolutionary Biology, and Behavior, Michigan State University, East Lansing, MI 48824
- Department of Forestry, Michigan State University, East Lansing, MI 48824
| | - Walter D Koenig
- Hastings Reservation, University of California Berkeley, Carmel Valley, CA 93924
| | - Georges Kunstler
- Université Grenoble Alpes, l'Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), Laboratoire EcoSystémes et Sociétés En Montagne (LESSEM), 38402 St.-Martin-d'Heres, France
| | | | - Mateusz Ledwon
- Institute of Systematics and Evolution of Animals, Polish Academy of Sciences, 31-016 Krakow, Poland
| | - James A Lutz
- Department of Wildland Resources, Utah State University, Logan, UT 84322
- Ecology Center, Utah State University, Logan, UT 84322
| | - Renzo Motta
- Department of Agriculture, Forest and Food Sciences, University of Torino, 10095 Grugliasco, TO, Italy
| | - Jonathan A Myers
- Department of Biology, Washington University in St. Louis, St. Louis, MO 63130
| | - Thomas A Nagel
- Department of Forestry and Renewable Forest Resources, Biotechnical Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia
| | - Chase L Nuñez
- Department for the Ecology of Animal Societies, Max Planck Institute of Animal Behavior, 78457 Konstanz, Germany
| | - Ian S Pearse
- US Geological Survey, Fort Collins Science Center, Fort Collins, CO 80526
| | - Łukasz Piechnik
- W. Szafer Institute of Botany, Polish Academy of Sciences, 31-512 Krakow, Poland
| | - John R Poulsen
- Nicholas School of the Environment, Duke University, Durham, NC 27708
| | | | - Miranda D Redmond
- Department of Forest and Rangeland Stewardship, Colorado State University, Fort Collins, CO 80523
| | - Chantal D Reid
- Nicholas School of the Environment, Duke University, Durham, NC 27708
| | - Kyle C Rodman
- Department of Forest and Wildlife Ecology, University of Wisconsin-Madison, Madison, WI 53706
| | - C Lane Scher
- Nicholas School of the Environment, Duke University, Durham, NC 27708
| | - Harald Schmidt Van Marle
- Universidad de Chile, Facultad de Ciencias Forestales y de la Conservación de la Naturaleza (FCFCN), La Pintana, 8820808 Santiago, Chile
| | - Barbara Seget
- W. Szafer Institute of Botany, Polish Academy of Sciences, 31-512 Krakow, Poland
| | - Shubhi Sharma
- Nicholas School of the Environment, Duke University, Durham, NC 27708
| | - Miles Silman
- Department of Biology, Wake Forest University, Winston-Salem, NC 27106
| | | | - Margaret Swift
- Nicholas School of the Environment, Duke University, Durham, NC 27708
| | - Maria Uriarte
- Department of Ecology, Evolution and Environmental Biology, Columbia University, New York, NY 10027
| | - Giorgio Vacchiano
- Department of Agricultural and Environmental Sciences - Production, Territory, Agroenergy (DISAA), University of Milan, 20133 Milano, Italy
| | - Thomas T Veblen
- Department of Geography, University of Colorado, Boulder, CO 80309
| | - Amy V Whipple
- Department of Biological Sciences, Northern Arizona University, Flagstaff, AZ 86011
| | - Thomas G Whitham
- Department of Biological Sciences, Northern Arizona University, Flagstaff, AZ 86011
| | - Andreas P Wion
- Department of Forest and Rangeland Stewardship, Colorado State University, Fort Collins, CO 80523
| | - S Joseph Wright
- Smithsonian Tropical Research Institute, Apartado 0843-03092, Balboa, Republic of Panama
| | - Kai Zhu
- Department of Environmental Studies, University of California, Santa Cruz, CA 95064
| | - Jess K Zimmerman
- Department of Environmental Sciences, University of Puerto Rico, Rio Piedras, Puerto Rico, United States 00936
| | - Magdalena Żywiec
- W. Szafer Institute of Botany, Polish Academy of Sciences, 31-512 Krakow, Poland
| | - James S Clark
- Nicholas School of the Environment, Duke University, Durham, NC 27708;
- Université Grenoble Alpes, l'Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), Laboratoire EcoSystémes et Sociétés En Montagne (LESSEM), 38402 St.-Martin-d'Heres, France
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16
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Piovesan G, Biondi F. On tree longevity. THE NEW PHYTOLOGIST 2021; 231:1318-1337. [PMID: 33305422 DOI: 10.1111/nph.17148] [Citation(s) in RCA: 32] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/03/2020] [Accepted: 11/25/2020] [Indexed: 05/03/2023]
Abstract
Large, majestic trees are iconic symbols of great age among living organisms. Published evidence suggests that trees do not die because of genetically programmed senescence in their meristems, but rather are killed by an external agent or a disturbance event. Long tree lifespans are therefore allowed by specific combinations of life history traits within realized niches that support resistance to, or avoidance of, extrinsic mortality. Another requirement for trees to achieve their maximum longevity is either sustained growth over extended periods of time or at least the capacity to increase their growth rates when conditions allow it. The growth plasticity and modularity of trees can then be viewed as an evolutionary advantage that allows them to survive and reproduce for centuries and millennia. As more and more scientific information is systematically collected on tree ages under various ecological settings, it is becoming clear that tree longevity is a key trait for global syntheses of life history strategies, especially in connection with disturbance regimes and their possible future modifications. In addition, we challenge the long-held notion that shade-tolerant, late-successional species have longer lifespans than early-successional species by pointing out that tree species with extreme longevity do not fit this paradigm. Identifying extremely old trees is therefore the groundwork not only for protecting and/or restoring entire landscapes, but also to revisit and update classic ecological theories that shape our understanding of environmental change.
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Affiliation(s)
- Gianluca Piovesan
- Dendrology Lab, Department of Agriculture and Forest Sciences (DAFNE), University of Tuscia, Viterbo, 01100, Italy
| | - Franco Biondi
- DendroLab, Department of Natural Resources and Environmental Science, University of Nevada, Reno, NV, 89557, USA
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17
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Balantic C, Adams A, Gross S, Mazur R, Sawyer S, Tucker J, Vernon M, Mengelt C, Morales J, Thorne JH, Brown TM, Athearn N, Morelli TL. Toward climate change refugia conservation at an ecoregion scale. CONSERVATION SCIENCE AND PRACTICE 2021. [DOI: 10.1111/csp2.497] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
Affiliation(s)
- Cathleen Balantic
- Northeast Climate Adaptation Science Center, Department of Environmental Conservation University of Massachusetts Amherst Amherst Massachusetts USA
| | - Andrea Adams
- Earth Research Institute University of California Santa Barbara Santa Barbara California USA
| | - Shana Gross
- Ecology Program USDA Forest Service, Region 5 South Lake Tahoe California USA
| | - Rachel Mazur
- Division of Resources Management and Science Yosemite National Park El Portal California USA
| | - Sarah Sawyer
- USDA Forest Service, Pacific Southwest Region Vallejo California USA
| | - Jody Tucker
- USDA Forest Service, Pacific Southwest Region Vallejo California USA
| | - Marian Vernon
- Point Blue Conservation Science Petaluma California USA
| | - Claudia Mengelt
- U.S. Fish and Wildlife Service Science Applications Sacramento California USA
| | - Jennifer Morales
- Climate Change Program California Department of Water Resources Fresno California USA
| | - James H. Thorne
- Department of Environmental Science and Policy University of California Davis California USA
| | - Timothy M. Brown
- Department of Ecology and Evolutionary Biology University of California Santa Cruz California USA
| | - Nicole Athearn
- Division of Resources Management and Science National Park Service El Portal California USA
| | - Toni Lyn Morelli
- U.S. Geological Survey, Northeast Climate Adaptation Science Center, Department of Environmental Conservation University of Massachusetts Amherst Amherst Massachusetts USA
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18
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Carroll CJ, Knapp AK, Martin PH. Higher temperatures increase growth rates of Rocky Mountain montane tree seedlings. Ecosphere 2021. [DOI: 10.1002/ecs2.3414] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Affiliation(s)
- Charles J.W. Carroll
- Graduate Degree Program in Ecology and Department of Biology Colorado State University Fort CollinsColorado80526USA
| | - Alan K. Knapp
- Graduate Degree Program in Ecology and Department of Biology Colorado State University Fort CollinsColorado80526USA
| | - Patrick H. Martin
- Department of Biological Sciences University of Denver Denver Colorado80208USA
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19
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Abstract
The giant sequoia (Sequoiadendron giganteum) of California are massive, long-lived trees that grow along the U.S. Sierra Nevada mountains. Genomic data are limited in giant sequoia and producing a reference genome sequence has been an important goal to allow marker development for restoration and management. Using deep-coverage Illumina and Oxford Nanopore sequencing, combined with Dovetail chromosome conformation capture libraries, the genome was assembled into eleven chromosome-scale scaffolds containing 8.125 Gbp of sequence. Iso-Seq transcripts, assembled from three distinct tissues, was used as evidence to annotate a total of 41,632 protein-coding genes. The genome was found to contain, distributed unevenly across all 11 chromosomes and in 63 orthogroups, over 900 complete or partial predicted NLR genes, of which 375 are supported by annotation derived from protein evidence and gene modeling. This giant sequoia reference genome sequence represents the first genome sequenced in the Cupressaceae family, and lays a foundation for using genomic tools to aid in giant sequoia conservation and management.
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20
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Disney M, Burt A, Wilkes P, Armston J, Duncanson L. New 3D measurements of large redwood trees for biomass and structure. Sci Rep 2020; 10:16721. [PMID: 33060622 PMCID: PMC7566452 DOI: 10.1038/s41598-020-73733-6] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2020] [Accepted: 09/21/2020] [Indexed: 11/13/2022] Open
Abstract
Large trees are disproportionately important in terms of their above ground biomass (AGB) and carbon storage, as well as their wider impact on ecosystem structure. They are also very hard to measure and so tend to be underrepresented in measurements and models of AGB. We show the first detailed 3D terrestrial laser scanning (TLS) estimates of the volume and AGB of large coastal redwood Sequoia sempervirens trees from three sites in Northern California, representing some of the highest biomass ecosystems on Earth. Our TLS estimates agree to within 2% AGB with a species-specific model based on detailed manual crown mapping of 3D tree structure. However TLS-derived AGB was more than 30% higher compared to widely-used general (non species-specific) allometries. We derive an allometry from TLS that spans a much greater range of tree size than previous models and so is potentially better-suited for use with new Earth Observation data for these exceptionally high biomass areas. We suggest that where possible, TLS and crown mapping should be used to provide complementary, independent 3D structure measurements of these very large trees.
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Affiliation(s)
| | - Andrew Burt
- UCL Geography, Gower Street, London, WC1E 6BT, UK
| | - Phil Wilkes
- UCL Geography, Gower Street, London, WC1E 6BT, UK
- NERC National Centre for Earth Observation (NCEO), UCL, Gower Street, London, WC1E 6BT, UK
| | - John Armston
- Department of Geographical Sciences, University of Maryland, College Park, 2181 Lefrak Hall, College Park, MD, 20742, USA
| | - Laura Duncanson
- Department of Geographical Sciences, University of Maryland, College Park, 2181 Lefrak Hall, College Park, MD, 20742, USA
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21
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Kramer RD, Ishii HR, Carter KR, Miyazaki Y, Cavaleri MA, Araki MG, Azuma WA, Inoue Y, Hara C. Predicting effects of climate change on productivity and persistence of forest trees. Ecol Res 2020. [DOI: 10.1111/1440-1703.12127] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
- Russell D. Kramer
- School of Environmental and Forest Science, College of the Environment University of Washington Seattle Washington USA
| | - H. Roaki Ishii
- Graduate School of Agricultural Science Kobe University Kobe Japan
| | - Kelsey R. Carter
- College of Forest Resources & Environmental Science Michigan Technological University Houghton Michigan USA
- Earth and Environmental Science Division Los Alamos National Laboratory Los Alamos New Mexico USA
| | - Yuko Miyazaki
- Graduate School of Environmental and Life Science Okayama University Okayama Japan
| | - Molly A. Cavaleri
- College of Forest Resources & Environmental Science Michigan Technological University Houghton Michigan USA
| | - Masatake G. Araki
- Department of Plant Ecology, Forestry and Forest Products Research Institute Tsukuba Japan
| | - Wakana A. Azuma
- Graduate School of Agricultural Science Kobe University Kobe Japan
| | - Yuta Inoue
- Department of Plant Ecology, Forestry and Forest Products Research Institute Tsukuba Japan
| | - Chinatsu Hara
- Graduate School of Agricultural Science Kobe University Kobe Japan
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Pesendorfer MB, Bogdziewicz M, Szymkowiak J, Borowski Z, Kantorowicz W, Espelta JM, Fernández‐Martínez M. Investigating the relationship between climate, stand age, and temporal trends in masting behavior of European forest trees. GLOBAL CHANGE BIOLOGY 2020; 26:1654-1667. [PMID: 31950581 PMCID: PMC7079002 DOI: 10.1111/gcb.14945] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2019] [Accepted: 11/24/2019] [Indexed: 06/01/2023]
Abstract
Masting-temporally variable seed production with high spatial synchrony-is a pervasive strategy in wind-pollinated trees that is hypothesized to be vulnerable to climate change due to its correlation with variability in abiotic conditions. Recent work suggests that aging may also have strong effects on seed production patterns of trees, but this potential confounding factor has not been considered in previous times series analysis of climate change effects. Using a 54 year dataset for seven dominant species in 17 forests across Poland, we used the proportion of seed-producing trees (PST) to contrast the predictions of the climate change and aging hypotheses in Abies alba, Fagus sylvatica, Larix decidua, Picea abies, Pinus sylvestris, Quercus petraea, and Quercus robur. Our results show that in all species, PST increased over time and that this change correlated most strongly with stand age, while the standardized precipitation-evapotranspiration index, a measure of drought, contributed to temporal trends in PST of F. sylvatica and Q. robur. Temporal variability of PST also increased over time in all species except P. sylvestris, while trends in temporal autocorrelation and among-stand synchrony reflect species-specific masting strategies. Our results suggest a pivotal role of plant ontogeny in driving not only the extent but also variability and synchrony of reproduction in temperate forest trees. In a time of increasing forest regrowth in Europe, we therefore call for increased attention to demographic effects such as aging on plant reproductive behavior, particularly in studies examining global change effects using long-term time series data.
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Affiliation(s)
- Mario B. Pesendorfer
- Institute of Forest EcologyDepartment of Forest and Soil SciencesUniversity of Natural Resources and Life SciencesViennaAustria
- Cornell Lab of OrnithologyIthacaNYUSA
- Smithsonian Migratory Bird CenterNational Zoological ParkWashingtonDCUSA
| | | | - Jakub Szymkowiak
- Population Ecology LabFaculty of BiologyAdam Mickiewicz UniversityPoznańPoland
| | | | - Władysław Kantorowicz
- Department of Silviculture and Genetics of Forest TreesForest Research InstituteRaszynPoland
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DeSilva R, Dodd RS. Fragmented and isolated: limited gene flow coupled with weak isolation by environment in the paleoendemic giant sequoia (Sequoiadendron giganteum). AMERICAN JOURNAL OF BOTANY 2020; 107:45-55. [PMID: 31883111 DOI: 10.1002/ajb2.1406] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2019] [Accepted: 11/13/2019] [Indexed: 06/10/2023]
Abstract
PREMISE Patterns of genetic structure across a species' range reflect the long-term interplay between genetic drift, gene flow, and selection. Given the importance of gene flow in preventing the loss of diversity through genetic drift among spatially isolated populations, understanding the dynamics of gene flow and the factors that influence connectivity across a species' range is a major goal for conservation of genetic diversity. Here we present a detailed look at gene flow dynamics of Sequoiadendron giganteum, a paleoendemic tree species that will likely face numerous threats due to climate change. METHODS We used microsatellite markers to examine nineteen populations of S. giganteum for patterns of genetic structure and to estimate admixture and rates of gene flow between eight population pairs. Also, we used Generalized Dissimilarity Models to elucidate landscape factors that shape genetic differentiation among populations. RESULTS We found minimal gene flow between adjacent groves in the northern disjunct range. In most of the southern portion of the range, groves showed a signal of connectivity which degrades to isolation in the extreme south. Geographic distance was the most important predictor of genetic dissimilarity across the range, with environmental conditions related to precipitation and temperature explaining a small, but significant, portion of the genetic variance. CONCLUSIONS Due to their isolation and unique genetic composition, northern populations of S. giganteum should be considered a high conservation priority. In this region, we suggest germplasm conservation as well as restoration planting to enhance genetic diversity.
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Affiliation(s)
- Rainbow DeSilva
- Department of Environmental Science, Policy, and Management, University of California at Berkeley, Berkeley, California, USA
| | - Richard S Dodd
- Department of Environmental Science, Policy, and Management, University of California at Berkeley, Berkeley, California, USA
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Exploring the Phylogeography of Ancient Platycladus orientalis in China by Specific-Locus Amplified Fragment Sequencing. Int J Mol Sci 2019; 20:ijms20163871. [PMID: 31398898 PMCID: PMC6719015 DOI: 10.3390/ijms20163871] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2019] [Revised: 07/31/2019] [Accepted: 08/01/2019] [Indexed: 02/06/2023] Open
Abstract
Platycladus orientalis (i.e., Chinese thuja) is famous for its lifespan spanning hundreds, and even thousands, of years. Most ancient P. orientalis populations are widely distributed in China, with accessible historical records, making them valuable genetic resources. In this study, the distribution pattern of ancient P. orientalis in China was analyzed based on 13 bioclimatic factors. Additionally, a specific-locus amplified fragment (SLAF) sequencing method was applied to detect single nucleotide polymorphisms (SNPs) in the genomes of 100 accessions from 13 populations. The resulting data revealed that the suitable areas for the distribution of ancient P. orientalis populations were accurately predicted with four main climatic factors. A total of 81,722 SNPs were identified from 461,867 SLAFs for 100 individuals, with an average sequencing depth of 10.11-fold and a Q30 value of 82.75%. The pair-wise genetic distance and genetic differentiation of 13 populations indicated that the BT-T population exhibited the largest divergence from the other populations. A neighbor-joining phylogenetic tree suggested the relationship between many individuals was inconsistent with the geographical location, possibly indicative of a history of transplantation and cultivation. All individuals were clustered into nine genotypes according to a structural analysis and the relationships between individuals were clarified in phylogenetic trees. This study highlights the importance of the de novo genome sequencing of ancient P. orientalis and may provide the basis for the conservation of P. orientalis genetic resources, the identification of supergene families, and the evaluation of related genetic resources.
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Munné-Bosch S. Limits to Tree Growth and Longevity. TRENDS IN PLANT SCIENCE 2018; 23:985-993. [PMID: 30166058 DOI: 10.1016/j.tplants.2018.08.001] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/23/2018] [Revised: 07/28/2018] [Accepted: 08/01/2018] [Indexed: 05/21/2023]
Abstract
Tree growth and longevity are key features to understand fundamental issues of plant biology, environmental sciences, and current forest management plans. Here I discuss current evidence on the limits of tree growth and longevity and present a new conceptual framework to understand how and why they are closely interconnected. Despite the tremendous plasticity of trees, growth and longevity are limited not only by biotic and abiotic stresses, but also by age-related structural constraints such as height-related hydraulic limitations and vascular discontinuities, which are strongly species specific. Continuous growth and plastic branching may serve as a means to reach extreme longevities in some nonclonal trees, but even in these millennial organisms immortality can be attained only through the germ line.
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Affiliation(s)
- Sergi Munné-Bosch
- Department of Evolutionary Biology, Ecology and Environmental Sciences, University of Barcelona, Faculty of Biology, Av. Diagonal 643, E-08028 Barcelona, Spain.
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Finnerty C, Zhang L, Sedlak DL, Nelson KL, Mi B. Synthetic Graphene Oxide Leaf for Solar Desalination with Zero Liquid Discharge. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2017; 51:11701-11709. [PMID: 28892371 DOI: 10.1021/acs.est.7b03040] [Citation(s) in RCA: 100] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Water vapor generation through sunlight harvesting and heat localization by carbon-based porous thin film materials holds great promise for sustainable, energy-efficient desalination and water treatment. However, the applicability of such materials in a high-salinity environment emphasizing zero-liquid-discharge brine disposal has not been studied. This paper reports the characterization and evaporation performance of a nature-inspired synthetic leaf made of graphene oxide (GO) thin film material, which exhibited broadband light absorption and excellent stability in high-salinity water. Under 0.82-sun illumination (825 W/m2), a GO leaf floating on water generated steam at a rate of 1.1 L per m2 per hour (LMH) with a light-to-vapor energy conversion efficiency of 54%, while a GO leaf lifted above water in a tree-like configuration generated steam at a rate of 2.0 LMH with an energy efficiency of 78%. The evaporation rate increased with increasing light intensity and decreased with increasing salinity. During a long-term evaporation experiment with a 15 wt % NaCl solution, the GO leaf demonstrated stable performance despite gradual and eventually severe accumulation of salt crystals on the leaf surface. Furthermore, the GO leaf can be easily restored to its pristine condition by simply scraping off salt crystals from its surface and rinsing with water. Therefore, the robust high performance and relatively low fabrication cost of the synthetic GO leaf could potentially unlock a new generation of desalination technology that can be entirely solar-powered and achieve zero liquid discharge.
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Affiliation(s)
- Casey Finnerty
- Department of Civil and Environmental Engineering, University of California , Berkeley, California 94720, United States
| | - Lei Zhang
- Department of Civil and Environmental Engineering, University of California , Berkeley, California 94720, United States
| | - David L Sedlak
- Department of Civil and Environmental Engineering, University of California , Berkeley, California 94720, United States
| | - Kara L Nelson
- Department of Civil and Environmental Engineering, University of California , Berkeley, California 94720, United States
| | - Baoxia Mi
- Department of Civil and Environmental Engineering, University of California , Berkeley, California 94720, United States
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Williams CB, Reese Næsborg R, Dawson TE. Coping with gravity: the foliar water relations of giant sequoia. TREE PHYSIOLOGY 2017; 37:1312-1326. [PMID: 28985377 DOI: 10.1093/treephys/tpx074] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2016] [Accepted: 06/08/2017] [Indexed: 06/07/2023]
Abstract
In tall trees, the mechanisms by which foliage maintains sufficient turgor pressure and water content against height-related constraints remain poorly understood. Pressure-volume curves generated from leafy shoots collected crown-wide from 12 large Sequoiadendron giganteum (Lindley) J. Buchholz (giant sequoia) trees provided mechanistic insights into how the components of water potential vary with height in tree and over time. The turgor loss point (TLP) decreased with height at a rate indistinguishable from the gravitational potential gradient and was controlled by changes in tissue osmotica. For all measured shoots, total relative water content at the TLP remained above 75%. This high value has been suggested to help leaves avoid precipitous declines in leaf-level physiological function, and in giant sequoia was controlled by both tissue elasticity and the balance of water between apoplasm and symplasm. Hydraulic capacitance decreased only slightly with height, but importantly this parameter was nearly double in value to that reported for other tree species. Total water storage capacity also decreased with height, but this trend essentially disappeared when considering only water available within the typical range of water potentials experienced by giant sequoia. From summer to fall measurement periods we did not observe osmotic adjustment that would depress the TLP. Instead we observed a proportional shift of water into less mobile apoplastic compartments leading to a reduction in hydraulic capacitance. This collection of foliar traits allows giant sequoia to routinely, but safely, operate close to its TLP, and suggests that gravity plays a major role in the water relations of Earth's largest tree species.
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Affiliation(s)
- Cameron B Williams
- Department of Integrative Biology, University of California, Berkeley, CA 94720, USA
| | - Rikke Reese Næsborg
- Department of Integrative Biology, University of California, Berkeley, CA 94720, USA
| | - Todd E Dawson
- Department of Integrative Biology, University of California, Berkeley, CA 94720, USA
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29
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Chin ARO, Sillett SC. Leaf acclimation to light availability supports rapid growth in tall Picea sitchensis trees. TREE PHYSIOLOGY 2017; 37:1352-1366. [PMID: 28387871 DOI: 10.1093/treephys/tpx027] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2016] [Accepted: 03/01/2017] [Indexed: 06/07/2023]
Abstract
Leaf-level anatomical variation is readily apparent within tall tree crowns, yet the relative importance of water and light availability in controlling this variation remains unclear. Sitka spruce (Picea sitchensis, (Bong.) Carr.) thrives in temperate rainforests of the Pacific Northwest, where it has historically reached heights >100 m, despite rarely living more than 400 years alongside redwoods that are five times older. We examined leaves of trees up to 97 m tall using a combination of transverse sections, longitudinal sections, epidermal imprints and whole-leaf measurements to explore the combined effects of water stress and light availability on leaf development in P. sitchensis. In contrast to the situation in tall Cupressaceae, light availability-not hydraulic limitation-is the primary ecological driver of leaf-level anatomical variation in P. sitchensis. While height-associated decreases in leaf length and mesoporosity are best explained by hydrostatic constraints on leaf elongation, the majority of anatomical traits we measured reflect acclimation to light availability, including increases in leaf width and vascular tissue areas in the brightest parts of the crown. Along with these changes, the appearance of abaxial stomata in the bright upper crown, and the arrangement of mesophyll in uniseriate, transverse plates-with radially arranged apoplastic pathways leading directly to stomata before bridging them with a V-shaped cell-may enhance gas exchange and hydraulic conductivity. This suite of leaf traits suggests an adaptive strategy that maximizes photosynthesis at the expense of water-stress tolerance. Anatomical investigations spanning the height gradient in tall tree crowns build our understanding of mechanisms underlying among-species variation in growth rates, life spans, and potential responses to climate change.
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Affiliation(s)
- Alana R O Chin
- Department of Natural Resources, American River College, 4700 College Oak Drive, Sacramento, CA 95841,USA
| | - Stephen C Sillett
- Department of Forestry and Wildland Resources, Humboldt State University, 1 Harpst Street, Arcata, CA 95521, USA
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Ishii HR, Cavaleri MA. Canopy ecophysiology: exploring the terrestrial ecosystem frontier. TREE PHYSIOLOGY 2017; 37:1263-1268. [PMID: 28981895 DOI: 10.1093/treephys/tpx112] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2017] [Accepted: 08/14/2017] [Indexed: 06/07/2023]
Affiliation(s)
- H Roaki Ishii
- Graduate School of Agricultural Science, Kobe University, Kobe 657-8501, Japan
| | - Molly A Cavaleri
- School of Forest Resources & Environmental Science, Michigan Technological University, Houghton, MI 49931, USA
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Chang E, Zhang J, Deng N, Yao X, Liu J, Zhao X, Jiang Z, Shi S. Transcriptome differences between 20- and 3,000-year-old Platycladus orientalis reveal that ROS are involved in senescence regulation. ELECTRON J BIOTECHN 2017. [DOI: 10.1016/j.ejbt.2017.06.008] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
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Contrasting Impacts of Climate and Competition on Large Sugar Pine Growth and Defense in a Fire-Excluded Forest of the Central Sierra Nevada. FORESTS 2017. [DOI: 10.3390/f8070244] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
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Gorzelak MA, Pickles BJ, Hart MM. Exploring the symbiont diversity of ancient western redcedars: arbuscular mycorrhizal fungi of long-lived hosts. Mol Ecol 2017; 26:1586-1597. [PMID: 28099772 DOI: 10.1111/mec.14023] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2016] [Revised: 12/26/2016] [Accepted: 01/03/2017] [Indexed: 11/28/2022]
Abstract
Arbuscular mycorrhizal fungi (AMF) are globally distributed, monophyletic root symbionts with ancient origins. Their contribution to carbon cycling and nutrient dynamics is ecologically important, given their obligate association with over 70% of vascular plant species. Current understanding of AMF species richness and community structure is based primarily on studies of grasses, herbs and agricultural crops, typically in disturbed environments. Few studies have considered AMF interactions with long-lived woody perennial species in undisturbed ecosystems. Here we examined AMF communities associated with roots and soils of young, mature and old western redcedar (Thuja plicata) at two sites in the old-growth temperate rainforests of British Columbia. Due to the unique biology of AMF, community richness and structure were assessed using a conservative, clade-based approach. We found 91 AMF OTUs across all samples, with significantly greater AMF richness in the southern site, but no differences in richness along the host chronosequence at either site. All host age classes harboured AMF communities that were overdispersed (more different to each other than expected by chance), with young tree communities most resembling old tree communities. A comparison with similar clade richness data obtained from the literature indicates that western redcedar AMF communities are as rich as those of grasses, tropical trees and palms. Our examination of undisturbed temperate old-growth rainforests suggests that priority effects, rather than succession, are an important aspect of AMF community assembly in this ecosystem.
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Affiliation(s)
- Monika A Gorzelak
- Department of Forest and Conservation Science, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada
| | - Brian J Pickles
- School of Biological Sciences, University of Reading, Harborne Building, Whiteknights, Reading, RG6 8AS, UK
| | - Miranda M Hart
- Department of Biology, University of British Columbia Okanagan, Kelowna, BC, V1V 1V7, Canada
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Adesina O, Anzai IA, Avalos JL, Barstow B. Embracing Biological Solutions to the Sustainable Energy Challenge. Chem 2017. [DOI: 10.1016/j.chempr.2016.12.009] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Ambrose AR, Baxter WL, Wong CS, Burgess SSO, Williams CB, Næsborg RR, Koch GW, Dawson TE. Hydraulic constraints modify optimal photosynthetic profiles in giant sequoia trees. Oecologia 2016; 182:713-30. [DOI: 10.1007/s00442-016-3705-3] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2016] [Accepted: 08/12/2016] [Indexed: 01/09/2023]
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Lindenmayer DB, Laurance WF. The ecology, distribution, conservation and management of large old trees. Biol Rev Camb Philos Soc 2016; 92:1434-1458. [PMID: 27383287 DOI: 10.1111/brv.12290] [Citation(s) in RCA: 126] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2016] [Revised: 05/30/2016] [Accepted: 06/09/2016] [Indexed: 01/19/2023]
Abstract
Large old trees are some of the most iconic biota on earth and are integral parts of many terrestrial ecosystems including those in tropical, temperate and boreal forests, deserts, savannas, agro-ecological areas, and urban environments. In this review, we provide new insights into the ecology, function, evolution and management of large old trees through broad cross-disciplinary perspectives from literatures in plant physiology, growth and development, evolution, habitat value for fauna and flora, and conservation management. Our review reveals that the diameter, height and longevity of large old trees varies greatly on an inter-specific basis, thereby creating serious challenges in defining large old trees and demanding an ecosystem- and species-specific definition that will only rarely be readily transferable to other species or ecosystems. Such variation is also manifested by marked inter-specific differences in the key attributes of large old trees (beyond diameter and height) such as the extent of buttressing, canopy architecture, the extent of bark micro-environments and the prevalence of cavities. We found that large old trees play an extraordinary range of critical ecological roles including in hydrological regimes, nutrient cycles and numerous ecosystem processes. Large old trees strongly influence the spatial and temporal distribution and abundance of individuals of the same species and populations of numerous other plant and animal species. We suggest many key characteristics of large old trees such as extreme height, prolonged lifespans, and the presence of cavities - which confer competitive and evolutionary advantages in undisturbed environments - can render such trees highly susceptible to a range of human influences. Large old trees are vulnerable to threats ranging from droughts, fire, pests and pathogens, to logging, land clearing, landscape fragmentation and climate change. Tackling such diverse threats is challenging because they often interact and manifest in different ways in different ecosystems, demanding targeted species- or ecosystem-specific responses. We argue that novel management actions will often be required to protect existing large old trees and ensure the recruitment of new cohorts of such trees. For example, fine-scale tree-level conservation such as buffering individual stems will be required in many environments such as in agricultural areas and urban environments. Landscape-level approaches like protecting places where large old trees are most likely to occur will be needed. However, this brings challenges associated with likely changes in tree distributions associated with climate change, because long-lived trees may presently exist in places unsuitable for the development of new cohorts of the same species. Appropriate future environmental domains for a species could exist in new locations where it has never previously occurred. The future distribution and persistence of large old trees may require controversial responses including assisted migration via seed or seedling establishment in new locales. However, the effectiveness of such approaches may be limited where key ecological features of large old trees (such as cavity presence) depend on other species such as termites, fungi and bacteria. Unless other species with similar ecological roles are present to fulfil these functions, these taxa might need to be moved concurrently with the target tree species.
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Affiliation(s)
- David B Lindenmayer
- Fenner School of Environment and Society, The Australian National University, Canberra, 2601, Australia
| | - William F Laurance
- Centre for Tropical Environmental and Sustainability Science (TESS) & College of Science and Engineering, James Cook University, Cairns, 4878, Australia
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Chin ARO, Sillett SC. Phenotypic plasticity of leaves enhances water-stress tolerance and promotes hydraulic conductivity in a tall conifer. AMERICAN JOURNAL OF BOTANY 2016; 103:796-807. [PMID: 27208348 DOI: 10.3732/ajb.1600110] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2016] [Accepted: 03/30/2016] [Indexed: 06/05/2023]
Abstract
PREMISE OF THE STUDY Leaves respond to environmental signals and acclimate to local conditions until their ecological limits are reached. Understanding the relationships between anatomical variation in leaves and the availability of water and light improves our ability to predict ecosystem-level impacts of foliar response to climate change, as it expands our knowledge of tree physiology. METHODS We examined foliar anatomy and morphology of the largest plant species, Sequoiadendron giganteum, from leafy shoot samples collected throughout crowns of trees up to 95 m tall and assessed the functionality of within-crown variation with a novel drought/recovery experiment. KEY RESULTS We found phenotypic variation in response to water availability in 13 anatomical traits of Sequoiadendron leaves. Shoot expansion was constrained by the hydrostatic gradient of maximum water potential, while functional traits supporting succulence and toughness were associated with sites of peak hydraulic limitation. Water-stress tolerance in experimental shoots increased dramatically with height. CONCLUSION We propose a heat-sink function for transfusion tissue and uncover a suite of traits suggesting rapid hydraulic throughput and flexibility in water-stress tolerance investments as strategies that help this montane species reach such enormous size. Responses to water stress alter the amount of carbon stored in foliage and the rate of the eventual release of carbon.
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Affiliation(s)
- Alana R O Chin
- Department of Natural Resources, American River College, 4700 College Oak Drive, Sacramento, California 95841 USA
| | - Stephen C Sillett
- Department of Forestry and Wildland Resources, Humboldt State University, 1 Harpst Street, Arcata, California 95521 USA
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38
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Growth maximization trumps maintenance of leaf conductance in the tallest angiosperm. Oecologia 2014; 177:321-31. [DOI: 10.1007/s00442-014-3181-6] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2014] [Accepted: 12/02/2014] [Indexed: 10/24/2022]
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