Dissipation of atrazine, enrofloxacin, and sulfamethazine in wood chip bioreactors and impact on denitrification

Influence of Four Veterinary Antibiotics on Constructed Treatment Wetland Nitrogen Transformation

The use of wetlands as a treatment approach for nitrogen in runoff is a common practice in agroecosystems. However, nitrate is not the sole constituent present in agricultural runoff and other biologically active contaminants have the potential to affect nitrate removal efficiency. In this study, the impacts of the combined effects of four common veterinary antibiotics (chlortetracycline, sulfamethazine, lincomycin, monensin) on nitrate-N treatment efficiency in saturated sediments and wetlands were evaluated in a coupled microcosm/mesocosm scale experiment. Veterinary antibiotics were hypothesized to significantly impact nitrogen speciation (e.g., nitrate and ammonium) and nitrogen uptake and transformation processes (e.g., plant uptake and denitrification) within the wetland ecosystems. To test this hypothesis, the coupled study had three objectives: 1. assess veterinary antibiotic impact on nitrogen cycle processes in wetland sediments using microcosm incubations, 2. measure nitrate-N reduction in water of floating treatment wetland systems over time following the introduction of veterinary antibiotic residues, and 3. identify the fate of veterinary antibiotics in floating treatment wetlands using mesocosms. Microcosms containing added mixtures of the veterinary antibiotics had little to no effect at lower concentrations but stimulated denitrification potential rates at higher concentrations. Based on observed changes in the nitrogen loss in the microcosm experiments, floating treatment wetland mesocosms were enriched with 1000 μg L-1 of the antibiotic mixture. Rates of nitrate-N loss observed in mesocosms with the veterinary antibiotic enrichment were consistent with the microcosm experiments in that denitrification was not inhibited, even at the high dosage. In the mesocosm experiments, average nitrate-N removal rates were not found to be impacted by the veterinary antibiotics. Further, veterinary antibiotics were primarily found in the roots of the floating treatment wetland biomass, accumulating approximately 190 mg m-2 of the antibiotic mixture. These findings provide new insight into the impact that veterinary antibiotic mixtures may have on nutrient management strategies for large-scale agricultural operations and the potential for veterinary antibiotic removal in these wetlands.

A review of ecosystem services from edge-of-field practices in tile-drained agricultural systems in the United States Corn Belt Region

Edge-of-field management practices that reduce nutrient pollution from tile drainage while contributing habitat and other ecosystem services are needed to enhance agricultural systems in the US Corn Belt Region. In this review, we identified edge-of-field and catchment scale agricultural conservation practices for intercepting and treating tile drainage. The reviewed conservation practices were (1) controlled drainage, also known as drainage water management (USDA-NRCS Code 554); (2) drainage water recycling (USDA-NRCS Code 447); (3) denitrifying bioreactors (USDA-NRCS Code 605); (4) saturated buffers (USDA-NRCS Code 604); and (5) constructed or restored wetlands designed for water quality improvement (USDA-NRCS Code 656) herein referred to as water quality wetlands. We examined 119 studies that had information on one or more of the following ecosystem services: water retention, water quality improvement (e.g., nitrate, phosphate, sediment, or pesticide retention), wetland habitat (for birds, aquatic organisms, and pollinators), crop yield improvement, and other benefits (e.g., recreation, education, aesthetic appreciation, greenhouse gas retention). We found the five edge-of-field practices were all effective at removing nitrate with varying degrees of other potential benefits and disservices (e.g., greenhouse gas production). Drainage water recycling and water quality wetlands have the potential to provide the most co-benefits as they provide surface water systems for capturing surface flows in addition to tile drainage while also potentially providing habitat and recreation opportunities. However, the following research needs are identified: 1) the disservices and benefits associated with drainage water recycling have not been adequately evaluated; 2) surface flow dynamics are understudied across all reviewed management practices; 3) a complete accounting of phosphorus species and flow pathways for all management practices is needed; 4) field evaluations of the habitat benefit of all management practices are needed; and 5) greenhouse gas dynamics are understudied across all management practices. While all management practices are expected to reduce nitrate loads, addressing these knowledge gaps will help inform holistic management decisions for diverse stakeholders across the US Corn Belt.

The Behavior of Terbuthylazine, Tebuconazole, and Alachlor during Denitrification Process

Pesticide compounds can influence denitrification processes in groundwater in many ways. This study observed behavior of three selected pesticides under denitrifying conditions. Alachlor, terbuthylazine, and tebuconazole, in a concentration of 0.1 mL L-1, were examined using two laboratory denitrifications assays: a "short" 7-day and a "long" 28-day test. During these tests, removal of pesticides via adsorption and biotic decomposition, as well as the efficiency of nitrate removal in the presence of the pesticides, were measured. No considerable inhibition of the denitrification process was observed for any of the pesticides. On the contrary, significant stimulation was observed after 21 days for alachlor (49%) and after seven days for terbuthylazine (40%) and tebuconazole (36%). Adsorption was in progress only during the first seven days in the case of all tested pesticides and increased only negligibly afterwards. Immediate adsorption of terbuthylazine was probably influenced by the mercuric chloride inhibitor. A biotic loss of 4% was measured only in the case of alachlor.

Bioprocess performance, transformation pathway, and bacterial community dynamics in an immobilized cell bioreactor treating fludioxonil-contaminated wastewater under microaerophilic conditions

Fludioxonil is a post-harvest fungicide contained in effluents produced by fruit packaging plants, which should be treated prior to environmental dispersal. We developed and evaluated an immobilized cell bioreactor, operating under microaerophilic conditions and gradually reduced hydraulic retention times (HRTs) from 10 to 3.9 days, for the biotreatment of fludioxonil-rich wastewater. Fludioxonil removal efficiency was consistently above 96%, even at the shortest HRT applied. A total of 12 transformation products were tentatively identified during fludioxonil degradation by using liquid chromatography coupled to quadrupole time-of-flight Mass spectrometry (LC-QTOF-MS). Fludioxonil degradation pathway was initiated by successive hydroxylation and carbonylation of the pyrrole moiety and disruption of the oxidized cyanopyrrole ring at the NH-C bond. The detection of 2,2-difluoro-2H-1,3-benzodioxole-4-carboxylic acid verified the decyanation and deamination of the molecule, whereas its conversion to the tentatively identified compound 2,3-dihydroxybenzoic acid indicated its defluorination. High-throughput amplicon sequencing revealed that HRT shortening led to reduced α-diversity, significant changes in the β-diversity, and a shift in the bacterial community composition from an initial activated sludge system typical community to a community composed of bacterial taxa like Clostridium, Oligotropha, Pseudomonas, and Terrimonas capable of performing advanced degradation and/or aerobic denitrification. Overall, the immobilized cell bioreactor operation under microaerophilic conditions, which minimizes the cost for aeration, can provide a sustainable solution for the depuration of fludioxonil-contaminated agro-industrial effluents.

Comparison of microbial communities in replicated woodchip bioreactors

Denitrification in woodchip bioreactors is a microbial process, but the effects of variations in bioreactors operation on microbial community structure are not well understood. Here, our goals were to understand hydraulic retention time (HRT) as a factor that influences woodchip bioreactor microbial community variation and structure in replicated field bioreactors and to evaluate relationships between microbial community membership and marker genes for denitrification. We used a combination of quantitative polymerase chain reaction of nirS, nirK, nosZI, and nosZII and 16S rRNA amplicon sequencing to characterize the microbial communities of nine pilot-scale woodchip bioreactors located at Iowa State University. Our results showed dynamic microbial communities but with persistent taxa between two sampling years and three HRTs. Similarities between functional gene copy numbers across sampling year and HRT indicate that the potential for denitrification is conserved despite differences in the microbial communities. These results are evidence that there are specific and persistent taxa within replicated bioreactors. Woodchip bioreactor microbial community membership is recommended to be the focus of future studies to better understand the relationship between microbial community functions and bioreactor management.

Denitrifying bioreactor microbiome: Understanding pollution swapping and potential for improved performance

Denitrifying woodchip bioreactors are a best management practice to reduce nitrate-nitrogen (NO₃ -N) loading to surface waters from agricultural subsurface drainage. Their effectiveness has been proven in many studies, although variable results with respect to performance indicators have been observed. This paper serves the purpose of synthesizing the current state of the science in terms of the microbial community, its impact on the consistency of bioreactor performance, and its role in the production of potential harmful by-products including greenhouse gases, sulfate reduction, and methylmercury. Microbial processes other than denitrification have been observed in these bioreactor systems, including dissimilatory nitrate reduction to ammonia (DNRA) and anaerobic ammonium oxidation (anammox). Specific gene targets for denitrification, DNRA, anammox, and the production of harmful by-products are identified from bioreactor studies and other environmentally relevant systems for application in bioreactor studies. Lastly, cellulose depletion has been observed over time via increasing ligno-cellulose indices, therefore, the microbial metabolism of cellulose is an important function for bioreactor performance and management. Future work should draw from the knowledge of soil and wetland ecology to inform the study of bioreactor microbiomes.

Interrelationships between tetracyclines and nitrogen cycling processes mediated by microorganisms: A review

Due to their broad-spectrum antibacterial activity and low cost, tetracyclines (TCs) are a class of antibiotics widely used for human and veterinary medical purposes and as a growth-promoting agent for aquaculture. Interrelationships between TCs and nitrogen cycling have attracted scientific attention due to the complicated processes mediated by microorganisms. TCs negatively impact the nitrogen cycling; however, simultaneous degradation of TCs during nitrogen cycling mediated by microorganisms can be achieved. This review encapsulates the background and distribution of TCs in the environment. Additionally, the main nitrogen cycling process mediated by microorganisms were retrospectively examined. Furthermore, effects of TCs on the nitrogen cycling processes, namely nitrification, denitrification, and anammox, have been summarized. Finally, the pathway and microbial mechanism of degradation of TCs accompanied by nitrogen cycling processes were reviewed, along with the scope for prospective studies.

Nutrient and pesticide remediation using a two-stage bioreactor-adsorptive system under two hydraulic retention times

Nutrients and pesticides in agricultural runoff contribute to the degradation of water resources. Nitrates and phosphates can be remediated through the use of treatment systems such as woodchip bioreactors and adsorbent aggregate filters; however, concerns remain over potential effects of pesticides on nutrient removal efficiency in these systems. To test this, we designed laboratory-scale woodchip bioreactors equipped with secondary adsorbent aggregate filters and investigated the capacity of these systems to remediate nutrients when operated under two hydraulic retention times (HRT) and in the presence of commonly used pesticides. The woodchip bioreactors effectively removed over 99% of nitrate per day when operated under a 72 h hydraulic retention time, with the secondary expanded shale aggregate filters consistently reducing phosphate concentrations by 80-87%. Treatment efficacy of both systems was maintained in the presence of the insecticide chlorpyrifos. Reducing HRT in the bioreactors to 21 min decreased nitrate removal efficiency; however, the insecticides bifenthrin, chlorpyrifos, and the herbicide oxyfluorfen were reduced by 76%, 63%, and 31%, respectively. Cultivation approaches led to the isolation of 45 different species from the woodchip bioreactors operated under a 21 min HRT, with Bacillus species being the most prevalent throughout the treatment. By contrast, pesticide application decreased the number and diversity of Bacillus isolates and enriched for Pseudomonas and Exiguobacterium species. Woodchip bioreactors and adsorbent aggregate filters provide effective treatment platforms to remediate agrochemicals, where they maintain treatment efficacy in the presence of pesticides and can be modulated through HRT management to achieve environmental and operational water quality goals.

Pharmaceutical and anticorrosive substance removal by woodchip column reactor: removal process and effects of operational parameters

Urban stormwater has recently been considered a potential water resource to augment urban water supplies; however, the existence of emerging contaminants limits urban stormwater utilization. This study aims to use woodchip bioreactors, which are natural and inexpensive, to remove emerging contaminants from artificial stormwater, with a focus on the contaminant removal processes in the woodchip bioreactor and on the effects of operational parameters on the system performance. Seven commonly detected emerging contaminants - acetaminophen (ACE), caffeine (CAFF), carbamazepine (CBZ), ibuprofen (IBU), sulfathiazole (SFZ), benzotriazole (BT) and 5-methyl-1H-benzotriazole (5-MeBT) - were studied. The results showed that the removal efficiency and removal processes are heavily dependent on the compound. ACE and CAFF have the highest removal efficiencies (≥80%), and sorption and biodegradation are both crucial for their removal. However, IBU exhibits very limited sorption and biodegradation and hence has the worst removal (≤15%). The removal efficiencies of the other compounds (SFZ, CBZ, BT and 5-MeBT) range from ∼30 to 60%, and sorption is likely the main removal process. The effects of several operational parameters, including woodchip type, operation time, season and flow rate, on the removal rate of emerging contaminants were also explored. The results of this study showed that the woodchip column system, which is capable of sorption and biodegradation, represents a promising treatment process for removing emerging contaminants from urban stormwater.

Fate and behaviour of veterinary sulphonamides under denitrifying conditions

Antibiotics are among the most widely administered drugs in the growing animal food industry. Of all the antibiotics approved for agriculture, sulphonamides are of particular interest. Their spectrum of activity is broad, affecting gram-positive, gram-negative, and many protozoal organisms, and they have been used for the treatment of a wide variety of animals. Animal manure is one of primary sources of soil contamination by sulphonamides. As they have a low soil sorption potential and are therefore highly mobile in soil, they can be transported to groundwater. In the present study, papers dealing with the fate and behaviour of veterinary sulphonamides under denitrifying conditions often arising in the subsurface are reviewed. Veterinary sulphonamide-exposed conditions can result in either inhibition or stimulation of the denitrification process owing to their toxicity or stress for denitrifiers. The effect of sulphonamides on individual denitrification steps is unbalanced, which can cause accumulation of process intermediates (dinitrogen oxide, nitrites). Although research results related to veterinary sulphonamide biodegradation in a nitratereducing environment show great variety, they indicate that these compounds are biodegradable under denitrifying conditions, that their biodegradation fits the first-order kinetics model, and that microbial action is the main mechanism of their dissipation. Regarding biodegradation pathways, research to date has only focused on sulfamethoxazole. Its degradation is driven by the presence of nitrous acid, which is formed from nitrites generated by the denitrification process as an intermediate product. Nevertheless, sulfamethoxazole degradation is abiotic, meaning that it does not participate in the denitrifying metabolism. For the formation of sulfamethoxazole transformation products, including its nitro, nitroso and desamino derivatives, the presence of the primary aromatic amine group is key. As this functional group is common for all sulphonamides, it can be assumed that these transformation products are also involved in the degradation pathways of other sulphonamides.

Application of denitrifying bioreactors for the removal of atrazine in agricultural drainage water

Atrazine and nitrate NO₃-N are two agricultural pollutants that occur widely in surface and groundwater. One of the pathways by which these pollutants reach surface water is through subsurface drainage tile lines. Edge-of-field anaerobic denitrifying bioreactors apply organic substrates such as woodchips to stimulate the removal of NO₃-N from the subsurface tile waters through denitrification. Here we investigated the co-removal of NO₃-N and atrazine by these bioreactors. Laboratory experiments were conducted using 12-L woodchips-containing flow-through bioreactors, with and without the addition of biochar, to treat two concentrations of atrazine (20 and 50 μg L^-1) and NO₃-N (1.5 and 11.5 mg L^-1), operated at four hydraulic retention time, HRT, (4 h, 8 h, 24 h, 72 h). Additionally, we examined the effect of aerating the bioreactors on atrazine removal. Furthermore, we tested atrazine removal by a field woodchip denitrifying bioreactor. The removal of both NO₃-N and atrazine increased with increasing HRT in the laboratory bioreactors. At 4 h, the woodchip bioreactors removed 65% of NO₃-N and 25% of atrazine but, at 72 h, the bioreactors eliminated all the NO₃-N and 53% of atrazine. Biochar-amended bioreactors removed up to 90% of atrazine at 72-h retention time. We concluded that atrazine removal was primarily via adsorption because neither aeration nor NO₃-N levels had an effect. At 4-h retention time, the field bioreactors achieved 2.5 times greater atrazine removal than the laboratory bioreactors. Our findings thus highlighted hydraulic retention time and biochar amendments as two important factors that may control the efficiency of atrazine removal by denitrifying bioreactors. In sum, laboratory and field data demonstrated that denitrifying bioreactors have the potential to decrease pesticide transport from agricultural lands to surface waters.

Environmental fate and microbial effects of monensin, lincomycin, and sulfamethazine residues in soil

The impact of commonly-used livestock antibiotics on soil nitrogen transformations under varying redox conditions is largely unknown. Soil column incubations were conducted using three livestock antibiotics (monensin, lincomycin and sulfamethazine) to better understand the fate of the antibiotics, their effect on nitrogen transformation, and their impact on soil microbial communities under aerobic, anoxic, and denitrifying conditions. While monensin was not recovered in the effluent, lincomycin and sulfamethazine concentrations decreased slightly during transport through the columns. Sorption, and to a limited extent degradation, are likely to be the primary processes leading to antibiotic attenuation during leaching. Antibiotics also affected microbial respiration and clearly impacted nitrogen transformation. The occurrence of the three antibiotics as a mixture, as well as the occurrence of lincomycin alone affected, by inhibiting any nitrite reduction, the denitrification process. Discontinuing antibiotics additions restored microbial denitrification. Metagenomic analysis indicated that Proteobacteria, Bacteroidetes, Actinobacteria, and Chloroflexi were the predominant phyla observed throughout the study. Results suggested that episodic occurrence of antibiotics led to a temporal change in microbial community composition in the upper portion of the columns while only transient changes occurred in the lower portion. Thus, the occurrence of high concentrations of veterinary antibiotic residues could impact nitrogen cycling in soils receiving wastewater runoff or manure applications with potential longer-term microbial community changes possible at higher antibiotic concentrations.

Enhanced nitrate and phosphate removal in a denitrifying bioreactor with biochar

Denitrifying bioreactors (DNBRs) are an emerging technology used to remove nitrate-nitrogen (NO) from enriched waters by supporting denitrifying microorganisms with organic carbon in an anaerobic environment. Field-scale investigations have established successful removal of NO from agricultural drainage, but the potential for DNBRs to remediate excess phosphorus (P) exported from agricultural systems has not been addressed. We hypothesized that biochar addition to traditional woodchip DNBRs would enhance NO and P removal and reduce nitrous oxide (NO) emissions based on previous research demonstrating reduced leaching of NO and P and lower greenhouse gas production associated with biochar amendment of agricultural soils. Nine laboratory-scale DNBRs, a woodchip control, and eight different woodchip-biochar treatments were used to test the effect of biochar on nutrient removal. The biochar treatments constituted a full factorial design of three factors (biochar source material [feedstock], particle size, and application rate), each with two levels. Statistical analysis by repeated measures ANOVA showed a significant effect of biochar, time, and their interaction on NO and dissolved P removal. Average P removal of 65% was observed in the biochar treatments by 18 h, after which the concentrations remained stable, compared with an 8% increase in the control after 72 h. Biochar addition resulted in average NO removal of 86% after 18 h and 97% after 72 h, compared with only 13% at 18 h and 75% at 72 h in the control. Biochar addition also resulted in significantly lower NO production. These results suggest that biochar can reduce the design residence time by enhancing nutrient removal rates.

The effect of environmental and therapeutic concentrations of antibiotics on nitrate reduction rates in river sediment

The use of antibiotics in both human and veterinary medicine has led to increased presence of these compounds and antibiotic resistance in the environment. In this study, the effect of low, environmentally relevant (<mg L(-1)) and high therapeutic (>mg L(-1)) concentrations of vancomycin (VA), flumequine (FLU), and sulfamethoxazole (SMX) on nitrate reduction rates was studied in river sediments. Nitrate reduction rates were determined by supplying intact sediments for several weeks with both nitrate and antibiotics (ng L(-1), μg L(-1), and mg L(-1) concentrations), including a non-amended control. Furthermore the concentrations of the three investigated antibiotics were measured in the initial (natural) sediments and the sediments supplied with the antibiotics. The antibiotic concentrations in the sediments decreased (on average 62% for FLU and 93% for SMX) during the experiments, indicating loss of antibiotics due to sorption or (bio) degradation. Nitrate reduction rates were not affected by environmental concentrations of VA, FLU and SMX. FLU and SMX only partially inhibited nitrate reduction rates at high, therapeutic concentrations by 41 and 39% respectively. The three tested antibiotics significantly enhanced the production of nitrite, an intermediate in dissimilatory nitrate reduction. Nitrite production increased 1.9 and 1.4 fold for environmental VA concentrations (107 and 187 μg L(-1) respectively), application of 58 mg L(-1) SMX resulted in a 7.5 fold increase and augmented 16 and 8.5 fold in the presence of respectively 13 μg L(-1) and 52 mg L(-1) FLU. Even though inhibition of nitrate reduction rates was observed at therapeutic antibiotic concentrations, nitrate reduction proceeded under all experimental conditions, indicating the presence of resistance toward these antibiotics among the nitrate reducing bacteria. The accumulation of nitrite suggests that the nitrite reduction step was more affected than the overall nitrate reduction process.