Checklist of the diatoms (Bacillariophyta) from Lake Naivasha, Kenya, with some historical notes

Lake Naivasha is one of only two large freshwater lakes in the Eastern Rift Valley of Kenya, East Africa. Together with its satellite lakes Crescent Island Crater, Oloidien and Sonachi, it comprises a great variety of pelagic and benthic habitats for aquatic biota, and its sediment record represents a unique archive of past climate change and long-term ecosystem dynamics in equatorial East Africa. This is particularly so because local paleoenvironmental reconstructions can be checked against historical data on the composition of aquatic fauna and flora collected in Lake Naivasha since the early 20^th century. Some of the most prominent biological proxies for reconstructing past changes in lakes are diatoms (Bacillariophyta), a group of unicellular autotrophic eukaryotes of which the siliceous skeletons (valves) preserve well in lake sediments and are good indicators for, among others, climate-driven changes in salinity. However, diatom taxonomy and species concepts have changed a lot in recent decades, making it sometimes difficult for non-taxonomists to know which species are concerned in different published studies. This paper provides the currently accepted taxonomic names of the 310 specific and infraspecific diatom taxa reported from Lake Naivasha and its satellite lakes to date, together with their synonyms used in literature concerning these lakes as well as other, commonly used synonyms. Further, a short overview is given of the history of diatom research conducted on materials from Lake Naivasha and its satellite lakes. The present checklist may facilitate the identification and interpretation aspects of future diatom studies on the wider Lake Naivasha ecosystem and on other East African lakes that are less well studied.

Holocene bidirectional river system along the Kenya Rift and its influence on East African faunal exchange and diversity gradients

Although biodiversity in East Africa is overall extremely high, species richness is not geographically uniform for fishes and mammals. We investigated the biogeographic relevance of past river activity in the Kenya Rift. We show that during a humid period 12,000 to 8,000 years ago, a river system connected currently isolated rift lakes and was partly connected to the Nile. While this river system formed pathways for the dispersal of fishes between lakes, it also acted as a barrier to the range expansion of forest mammals. This fairly recent hydrological connectivity between lakes has been a key driver of modern biodiversity patterns in East Africa. Climate-driven changes in drainage networks on multimillennial timescales are an important hypothesis in biodiversity research.

East Africa is a global biodiversity hotspot and exhibits distinct longitudinal diversity gradients from west to east in freshwater fishes and forest mammals. The assembly of this exceptional biodiversity and the drivers behind diversity gradients remain poorly understood, with diversification often studied at local scales and less attention paid to biotic exchange between Afrotropical regions. Here, we reconstruct a river system that existed for several millennia along the now semiarid Kenya Rift Valley during the humid early Holocene and show how this river system influenced postglacial dispersal of fishes and mammals due to its dual role as a dispersal corridor and barrier. Using geomorphological, geochronological, isotopic, and fossil analyses and a synthesis of radiocarbon dates, we find that the overflow of Kenyan rift lakes between 12 and 8 ka before present formed a bidirectional river system consisting of a “Northern River” connected to the Nile Basin and a “Southern River,” a closed basin. The drainage divide between these rivers represented the only viable terrestrial dispersal corridor across the rift. The degree and duration of past hydrological connectivity between adjacent river basins determined spatial diversity gradients for East African fishes. Our reconstruction explains the isolated distribution of Nilotic fish species in modern Kenyan rift lakes, Guineo-Congolian mammal species in forests east of the Kenya Rift, and recent incipient vertebrate speciation and local endemism in this region. Climate-driven rearrangements of drainage networks unrelated to tectonic activity contributed significantly to the assembly of species diversity and modern faunas in the East African biodiversity hotspot.

Major and trace element geochemistry of Lake Bogoria and Lake Nakuru, Kenya, during extreme draught

The physico-chemical properties of water samples from the two athalassic endorheic lakes Bogoria and Nakuru in Kenya were analysed. Surface water samples were taken between July 2008 and October 2009 in weekly intervals from each lake. The following parameters were determined: pH, salinity, electric conductivity, dissolved organic carbon (DOC), the major cations (FAAS and ICP-OES) and the major anions (IC), as well as certain trace elements (ICP-OES). Samples of superficial sediments were taken in October 2009 and examined using Instrumental Neutron Activation Analysis (INAA) for their major and trace element content including rare earth elements (REE). Both lakes are highly alkaline with a dominance of Na > K > Si > Ca in cations and HCO3 > CO3 > Cl > F > SO4 in anions. Both lakes also exhibited high concentrations of Mo, As and fluoride. Due to an extreme draught from March to October 2009, the water level of Lake Nakuru dropped significantly. This created drastic evapoconcentration, with the total salinity rising from about 20‰ up to 63‰. Most parameters (DOC, Na, K, Ca, F, Mo and As) increased with falling water levels. A clear change in the quality of DOC was observed, followed by an almost complete depletion of dissolved Fe from the water phase. In Lake Bogoria the evapoconcentration effects were less pronounced (total salinity changed from about 40‰ to 48‰). The distributions of REE in the superficial sediments of Lake Nakuru and Lake Bogoria are presented here for the first time. The results show a high abundance of the REE and a very distinct Eu depletion of Eu/Eu* = 0.33-0.45.

Cogs in the endless machine: lakes, climate change and nutrient cycles: a review

Lakes have, rather grandly, been described as sentinels, integrators and regulators of climate change (Williamson et al., Limnol. Oceanogr. 2009; 54: 2273-82). Lakes are also part of the continuum of the water cycle, cogs in a machine that processes water and elements dissolved and suspended in myriad forms. Assessing the changes in the functioning of the cogs and the machine with respect to these substances as climate changes is clearly important, but difficult. Many other human-induced influences, not least eutrophication, that impact on catchment areas and consequently on lakes, have generally complicated the recording of recent change in sediment records and modern sets of data. The least confounded evidence comes from remote lakes in mountain and polar regions and suggests effects of warming that include mobilisation of ions and increased amounts of phosphorus. A cottage industry has arisen in deduction and prediction of the future effects of climate change on lakes, but the results are very general and precision is marred not only by confounding influences but by the complexity of the lake system and the infinite variety of possible future scenarios. A common conclusion, however, is that warming will increase the intensity of symptoms of eutrophication. Direct experimentation, though expensive and still unusual and confined to shallow lake and wetland systems is perhaps the most reliable approach. Results suggest increased symptoms of eutrophication, and changes in ecosystem structure, but in some respects are different from those deduced from comparisons along latitudinal gradients or by inference from knowledge of lake behaviour. Experiments have shown marked increases in community respiration compared with gross photosynthesis in mesocosm systems and it may be that the most significant churnings of these cogs in the earth-air-water machine will be in their influence on the carbon cycle, with possibly large positive feedback effects on warming.

High- and low-latitude forcing of Plio-Pleistocene East African climate and human evolution

The late Cenozoic climate of East Africa is punctuated by episodes of short, alternating periods of extreme wetness and aridity, superimposed on a regime of subdued moisture availability exhibiting a long-term drying trend. These periods of extreme climate variability appear to correlate with maxima in the 400-thousand-year (kyr) component of the Earth's eccentricity cycle. Prior to 2.7 Ma the wet phases appear every 400 kyrs, whereas after 2.7 Ma, the wet phases appear every 800 kyrs, with periods of precessional-forced extreme climate variability at 2.7-2.5 Ma, 1.9-1.7 Ma, and 1.1-0.9 Ma before present. The last three major lake phases occur at the times of major global climatic transitions, such as the onset of Northern Hemisphere Glaciation (2.7-2.5 Ma), intensification of the Walker Circulation (1.9-1.7 Ma), and the Mid-Pleistocene Revolution (1.0-0.7 Ma). High-latitude forcing is required to compress the Intertropical Convergence Zone so that East Africa becomes locally sensitive to precessional forcing, resulting in rapid shifts from wet to dry conditions. These periods of extreme climate variability may have provided a catalyst for evolutionary change and driven key speciation and dispersal events amongst mammals and hominins in East Africa.

Soil Carbon Isotope Evidence for Holocene Habitat Change in the Kenya Rift Valley

In eastern Africa the altitude of the boundary between montane forest and lowland savanna grassland changed substantially in response to climate change during the later Holocene, but this is not clearly reflected in regional pollen records. The carbon-13 to carbon-12 ratios of tropical grasses are higher than those of most other plants, and this difference is preserved in soil organic carbon stable isotope ratios. Soil organic matter (13)C/(12)C ratios in profiles along an altitude transect in the central Rift Valley of Kenya suggest that the forest-savanna boundary advanced more than 300 meters in altitude. This could have implications for understanding the effects of climate change on the configuration of floral zones, prehistoric hunter-gatherer land-use patterns, and the timing of the advent of Neolithic food production.

The ecology of Lake Nakuru (Kenya) : III. Abiotic factors and primary production

Abiotic factors, standing crop and photosynthetic production were studied in the equatorial alkaline-saline closed-basin Lake Nakuru (cond. 10,000-160,000 μS). Meteorological conditions and abiotic factors offer suppositions for a high primary productivity: mean solar radiation is 450-550 kerg·cm^-2·s^-1, with little seasonal variation, regular winds circulate the lake every day and nutrient concentrations are usually high (>100 μg P-PO₄·l^-1). Oxygen concentrations near sediments were <1 gO₂·m^-3 for at least 6 h·d^-1 in 1972/73, resulting in a release of ∼45 mg P-PO₄·m^-2·d^-1. Attenuation coefficients vary from 3.6-16.5 according to algal densities and mean depth from 0-400 cm. Algal biomass was ∼200 g·m^-3 (d.w.) in 1972/73, due to a lasting Spirulina platensis bloom (98.5% of algal biomass). In 1974 algal biomass suddenly dropped to 50 g·m^-3 (d.w.). Spirulina and several consumer organisms almost vanished, but coccoid cyanobacteria, Anabaenopsis and diatoms increased. Several causes for this change in ecosystem structure are discussed. The use of the light/dark bottle method to measure photosynthetic production in eutrophic alkaline lakes is discussed and relevant experiments were done. Oxygen tensions of 2-35 gO₂·m^-3 do not influence primary production rates. Net photosynthetic rates (mgO₂·m^-3·h^-1; photosynthetic quotient=1.18) reached 12-17.7 in 1972/73 and 2-3 in 1974, but vertically integrated rates were only 1-1.4 in 1972/73 and 0.8 in 1974, and daily net photosynthetic rates (gO₂·m^-3·24 h^-1) 3.5 in 1972/73 and 1 in 1974. 50% of areal rates were produced within the 10 most productive cm of the depth profile. The disproportion between high algal standing crops and relatively low production rates is due to self-shading of the algae, reducing the euphotic zone to 35 cm in 1972/73 and 77 cm in 1974. Efficiency of light utilization is 0.4-2%, varying with time of day and phytoplankton density. In situ efficiencies show an inverse relationship to light intensities. Photosynthetic rates of L. Nakuru remain within the range of other African lakes (0.1-3 gO₂·m^-2·h^-1). The relation of O₂ produced/Chl a of the euphotic zone is 50% lower then in tropical African freshwater lakes and conforms to lakes of temperate regions.

Orthophosphate turnover in East African lakes

Turnover rates of ³²P-PO₄ and concentrations of orthophosphate as soluble reactive phosphorus (SRP) were measured in five East African waters. Rapid incorporation of ³²P-PO₄ by the seston and orthophosphate concentrations below the limit of detectibility were found in Lakes Elmenteita, Naivasha, and Naivasha Crater Lake. Turnover was slow and orthophosphate concentration high in both Lake Nakuru and the Crescent Island Crater basin of Lake Naivasha. Further experiments in Lake Nakuru indicated that colloidal binding of orthophosphate was limited and that particles retained by an 8.0 μ filter incorporated 66% as much tracer as particles retained by a 0.1 μ filter. These experiments strengthen our conclusion that a large quantity of orthophosphate is available for algal use in Lake Nakuru.

Radiocarbon Dating of East African Lake Levels

The fluctuations of the key East African lakes discussed are summarized in Fig. 4 which also includes the available evidence from Lake Rukwa (42) and Lake Chad (43) Exceot for Lake Victoria, all of these now lack surface outlets and are situated in much drier climates than the major lakes of the Western Rift Valley, which remain filled to their overflow levels. The apparent differendes among the fluctuations of the lakes are partly due to differendes in the nature of the evidence or the intensity of research or both, although there must also have been important local differences in the histories of the lakes Yet the consistencies are far more striking, most notably the coincidence of early Holocene high stands. Between 10,000 and 8,000 years ago, it seems that lakes in many parts of tropical Africa were greatly enlarged. Where evidence for the previous span of time is well resolved, it appears that transgressions leading to this high stand began about 12,000 years ago, and evidende from three basins (Victoria, Nakuru, and Chad) indicates a pause or minor recession just at or before 10,000 years ago. Wherever information is available for the period preceding 12,000 years ago, it can consistentlybe shown that lakes were much small-er . Several basins (Rudolf, Nakuru, and Chad) also show traces of much earlier phases of lake expansion. which are not yet well dated but which all occurred more then 20,000 years ago. The Holocene record subsequent to the maximum of 10,00 to 8,000 years ago is more complex. Three basins (Rudolf, Nakuru, and Chad) show an apparently concordant, positive oscillation at some point between 6000 and 4000 years ago, but it is uncertain how widely this episode is represented. Although many of these lakes that are now closed filled to overflowing at least once during the late Quaternary, it is evident from Fig. 4 that the periods of expansion were short-lived compared with phases of contraction to levels near those of today. This pattern may be in accord with fragmentary evidence from lower and middle Pleistocene formations, such as those of Olduvai(44)and Paninj (45), within which some relatively short-term lake expansions can be documented, but which lack evidence for any marked long-term departure from a balance of evaporation and precipitation similar to the present one Further, this pattern of brief moist pulsations, with a duration of perhaps 2000 to 5000 years, is also suggested by other late Pleistocene and Holocene sequences (based primarily on geomorphological and palynological evidence) from the Saharan area, Angola, and South Africa (46). In default of radiometric dating, such complex successions of relatively brief moist intervals provide few stratigraphic markers of broad applicability. This, together with the fact that vegetation, weathering processes, montane glaciers, lake size, lake salinity, and so forth are all likely to reflect the diverse aspects of Climatic change differently, underscores the strictures of Cooke (2) and Flint (3) against the use of pluvials and intrlvasas a basis for subdividing Quaternary time in Africa. Positive correlations between high-latitude glacial advances or maxima and intervals of high lake levels have been demonstrated or suggested for many areas of mid-latitude North America and Eurasia (47), and similar patterns have often been regarded as probable for tropical Africa as well. However, the evidence summarized above shows a notable lack of such correlations for the tropical lakes considered here. If glaciation and tropical lake levels were connected at all, then a far more complex-delayed, multiplefactor, or inverse-relationship must be sought for the late Quaternary (48). This renders the introduction of new climato-stratigraphic terms such as hypothermal and interstadial (49) of questionable value in East Africa. Further, whereas the so-called pluvial lakes of higher latitudes were probably due primarily to reduced evaporation (50), our computations for the early Holocene lakes Nakuru and Naivasha, as well as for the oscillations of Lake Rudolf and Lake Victoria in recent decades, suggest that many or most of the high tropical lake levels where associated with a modest but significant increase in precipitation.