Organic amendments increased Chinese milk vetch symbiotic nitrogen fixation by enriching Mesorhizobium in rhizosphere

Symbiotic nitrogen fixation of Chinese milk vetch (Astragalus sinicus L.) can fix nitrogen from the atmosphere and serve as an organic nitrogen source in agricultural ecosystems. Exogenous organic material application is a common practice of affecting symbiotic nitrogen fixation; however, the results of the regulation activities remain under discussion. Studies on the impact of organic amendments on symbiotic nitrogen fixation have focused on dissolved organic carbon content changes, whereas the impact on dissolved organic carbon composition and the underlying mechanism remain unclear. In situ pot experiments were carried out using soils from a 40-year-old field experiment platform to investigate symbiotic nitrogen fixation rate trends, dissolved organic carbon concentration and component, and diazotroph community structure in roots and in rhizosphere soils following long-term application of different exogenous organic substrates, i.e., green manure, green manure and pig manure, and green manure and rice straw. Remarkable increases in rate were observed in and when compared with that in green manure treatment, with the greatest enhancement observed in the treatment. Moreover, organic amendments, particularly pig manure application, altered diazotroph community composition in rhizosphere soils, therefore increasing the abundance of the host-specific genus Mesorhizobium. Furthermore, organic amendments influence the diazotroph communities through two primary mechanisms. Firstly, the components of dissolved organic carbon promote an increase in available iron, facilitated by the presence of humus substrates. Secondly, the elevated content of dissolved organic carbon and available iron expands the niche breadth of Mesorhizobium within the rhizosphere. Consequently, these alterations result in a modified diazotroph community within the rhizosphere, which in turn influences Mesorhizobium nodulation in the root and symbiotic nitrogen fixation rate. The results of the present study enhance our understanding of the impact of organic amendments on symbiotic nitrogen fixation and the underlying mechanism, highlighting the key role of dissolved organic carbon composition on diazotroph community composition in the rhizosphere.

Driving factors of colored dissolved organic matter dynamics across a complex urbanized estuary

The role of estuaries in sourcing and transforming dissolved organic matter - the largest reservoir of organic carbon in the ocean - still presents many unknowns for coastal biogeochemical cycles, and is further complicated by increasing human pressures and a changing climate. Here, we examined the major drivers of colored dissolved organic matter (CDOM) dynamics in Long Island Sound (LIS), a heavily urbanized estuary of National Significance with a storied water quality past. A comprehensive new optical dataset, including measurements of CDOM absorption and fluorescence signatures, was integrated with biological and hydrological measurements to capture the spatiotemporal heterogeneities of LIS, including its urban-to-rural gradient, dynamic river mouths, and blue carbon ecosystems across seasons, following episodic storm events, and over five years. Results reveal longitudinal gradients in both DOM amount and quality. While carbon-rich and humic terrigenous DOM was dominant in the heavily riverine-influenced Central to Eastern LIS, an uncoupling between CDOM absorption (aCDOM) and dissolved organic carbon (DOC) concentration in Western LIS, and a stronger correlation with Chlorophyll-a, indicated increased autochthonous CDOM production. Closer to the New York City urban core, aCDOM was highly correlated to turbidity, consistent with increased wastewater influences. Fluorescence PARAFAC analysis provided strong evidence for seasonal processing of CDOM in LIS, related to increased summertime photochemical degradation of humic-like components and shoulder-season microbial processing. Riverine CDOM export was influenced by discharge amount, residence time, and coastal wetlands acting as additional sources of strongly humic and aromatic organic matter. These measurements allowed us to assess how hydrologic, biological, and anthropogenic processes impact DOM dynamics and, subsequently, biogeochemical variability and trophic status in this complex urbanized estuary, with implications for water quality management and policy. Results discussed here are applicable beyond LIS, as urbanized estuaries globally face similar hydrological and anthropogenic forcings.

Properties influencing flux and diatom uptake of mercury and methylmercury from estuarine sediments

Mercury (Hg) is a conspicuous and persistent global pollutant. Ionic Hg can be methylated into noxious methylmercury (CH3Hg), which biomagnifies in marine tropic webs and poses a health risk to humans and organisms. Sediment Hg methylation rates are variable, and the output flux of created CH3Hg are dependent on sediment characteristics and environmental factors. Thus, uncertainties remain about the formation and flux of CH3Hg from sediment, and how this could contribute to the bioaccumulative burden for coastal organisms in shallow ecosystems. Cores were collected from 3 estuarine locations along the Eastern USA to examine how sediments characteristics influence the introduction of Hg and CH3Hg into the base of the food chain. Stable isotopes of inorganic 200Hg and CH3199Hg were injected into sediments of individual cores, with cultured diatoms constrained to overlying waters. Five different treatments were done on duplicate cores, spiked with: (1) no Hg isotopes (control); (2) inorganic 200Hg; (3) CH3199Hg; (4) both 200Hg and CH3199Hg isotopes, (5) both 200Hg and CH3199Hg into overlying waters (not sediment). Experimental cores were incubated for 3 days under temperature and light controlled conditions. These results demonstrate that upper sediments characteristics lead to high variability in Hg cycling. Notably, sediments which contained abundant and peaty organic material (∼28 %LOI), had the highest pore water DOC (3206 μM) and displayed bands of sulfur reducing bacteria yielded the greatest methylation rate (1.97 % day-1) and subsequent diatom uptake of CH3200Hg (cell quota 0.18 amol/cell) in the overlying water.

Enhanced Role of Streamflow Processes in the Evolutionary Trends of Dissolved Organic Carbon

Investigating dissolved organic carbon (DOC) dynamics and drivers in rivers enhances the understanding of carbon-environment linkages and support sustainability. Previous studies did not fully consider the dynamic nature of key drivers that influence the long-term changing trends in DOC concentration over time (the controlling factors and their roles in DOC trend can undergo alterations over time). We analyzed 42 years (1979-2018) of hydrometeorology, sulfate SO4, and DOC data from a 5.42 km2 watershed in central-southern Ontario, Canada. Our findings reveal a significant (p ≤ 0.01) overall increase in DOC concentrations, mainly due to the coevolution of SO4 and streamflow trends, especially the extreme flows. Over the 42-year period, the changing trend of streamflow (especially the extreme high or low flows) have significantly (p < 0.05) intensified their influence on DOC trends, increasing by an average of 30%. Conversely, the impact of SO4 has weakened, experiencing an average decrease of 32.6%. The upward trend in the annual average DOC concentration is attributed to the increasing number of maximum flow days within a year, while the decreasing trend in the number of minimum flow days has a contrasting effect. In other words, changes in maximum and minimum flow days have a counteracting effect on the DOC concentration trends. These results underscore the importance of considering the effects of altered streamflow processes on carbon cycle changes under evolving environmental conditions.

Long-term HD-tDCS modulates dynamic changes of brain activity on patients with disorders of consciousness: A resting-state EEG study

OBJECTIVE

High-definition transcranial direct current stimulation (HD-tDCS) has been an effective neurostimulation method in the treatment of disorders of consciousness (DOC). However, the effects and mechanism of HD-tDCS are still unclear.

METHODS

This study recruited 8 DOC patients and applied 20-min sessions of 2 mA HD-tDCS (central anode electrode at Pz) for 14 consecutive days. We record DOC patients' EEG data and Coma Recovery Scale-Revised (CRS-R) values at four time point: baseline (T0), after 1 day's and 7,14 days' parietal HD-tDCS treatment (T1, T2, T3). Power spectral density (PSD), relative power (RP), spectral entropy and spectral exponent were calculated to evaluate the EEG dynamic changes of DOC patients during long-term parietal HD-tDCS. At last, we calculated the correlation between changes of EEG features and changes of CRS-R values.

RESULT

After 1 day's parietal HD-tDCS, DOC patients' CRS-R value had not changed (8.25 ± 1.91). HD-tDCS improved DOC patients' CRS-R value at T2 (9.75 ± 1.91, p < 0.05) and at T3 (11.38 ± 2.77, p < 0.05), compared with that at T0 (8.25 ± 1.91). As the treatment time increased, the EEG PSD decayed more slowly. Specifically, the delta frequency band RP decreased, while the alpha, beta, and gamma frequency bands RP increased. EEG oscillation characteristics changed but not significant at T1 (p > 0.05), and showed significant changes at T2 and T3 (p < 0.05). The spectral entropy continuously increased and the spectral exponent continuously decreased from T0 to T3. Specifically, the spectral entropy and spectral exponent of the parietal and occipital regions were significantly higher at T2 and T3 than that at T0 (p < 0.05). In addition, The changes in EEG features of the parietal and occipital lobes were correlated with changes in CRS-R value, especially between T2 and T0.

CONCLUSION

Long-term parietal HD-tDCS can improve the consciousness level and brain activity in DOC patients. Resting-state EEG can evaluate the dynamic changes of brain activity in DOC patients during HD-tDCS. EEG oscillation and non-oscillatory activity might be used to explain the mechanism of HD-tDCS on DOC patients.

A drained nutrient-poor peatland forest in boreal Sweden constitutes a net carbon sink after integrating terrestrial and aquatic fluxes

Northern peatlands provide a globally important carbon (C) store. Since the beginning of the 20th century, however, large areas of natural peatlands have been drained for biomass production across Fennoscandia. Today, drained peatland forests constitute a common feature of the managed boreal landscape, yet their ecosystem C balance and associated climate impact are not well understood, particularly within the nutrient-poor boreal region. In this study, we estimated the net ecosystem carbon balance (NECB) from a nutrient-poor drained peatland forest and an adjacent natural mire in northern Sweden by integrating terrestrial carbon dioxide (CO2 ) and methane (CH4 ) fluxes with aquatic losses of dissolved organic C (DOC) and inorganic C based on eddy covariance and stream discharge measurements, respectively, over two hydrological years. Since the forest included a dense spruce-birch area and a sparse pine area, we were able to further evaluate the effect of contrasting forest structure on the NECB and component fluxes. We found that the drained peatland forest was a net C sink with a 2-year mean NECB of -115 ± 5 g C m-2  year-1 while the adjacent mire was close to C neutral with 14.6 ± 1.7 g C m-2  year-1 . The NECB of the drained peatland forest was dominated by the net CO2 exchange (net ecosystem exchange [NEE]), whereas NEE and DOC export fluxes contributed equally to the mire NECB. We further found that the C sink strength in the sparse pine forest area (-153 ± 8 g C m-2  year-1 ) was about 1.5 times as high as in the dense spruce-birch forest area (-95 ± 8 g C m-2  year-1 ) due to enhanced C uptake by ground vegetation and lower DOC export. Our study suggests that historically drained peatland forests in nutrient-poor boreal regions may provide a significant net ecosystem C sink and associated climate benefits.

Dissolved carbon in effluent of wastewater treatment plants and its potential impacts in the receiving karst river

The dissolved carbon cycling in river system fueled by wastewater treatment plant effluent have been a research hotspot. However, the composition of dissolved carbon (DC) in wastewater effluents from karst regions remains poorly understood, resulting in a lack of clarity regarding its impact on the dynamics of dissolved carbon in karst rivers. To address this knowledge gap, this study investigated variations of dissolved inorganic (DIC) and organic C (DOC) components in effluent in karst regions and preliminarily discussed their influence on the DC cycling in karst rivers. The results showed that bicarbonate (HCO3-) in WWTP effluents makes more than 90% of the total dissolved inorganic carbon (DIC). The partial pressure of aqueous CO2 (pCO2) of the effluent reached 14450 ± 10084μtam, and pCO2 level declined with increasing river distance from the effluent discharge, effluent acted as a strong CO2 emitter to the atmosphere. Stable carbon isotope and water chemistry evidence revealed that organic matter degradation made important contributions to the high CO2 concentrations in effluent. PHREEQC mixing simulation together with filed samples data indicated that the DIC species can be changed, and pCO2 increased in receiving karst river water after mixed with effluent. The dissolved organic carbon (DOC) of effluent contained humic-like and protein-tryptophan-like, both of them appeared important and recent autochthonous, which could interfere the distinguish the sources of DOC in receiving karst river water. Thus, these findings highlight that the effluent can be an essential factor for the changes of the karst riverine DC pool, which advance our understanding on karst riverine DC evolution under anthropogenic activities. As more than 30% of the earth surface in China, northern America, and Europe are covered by carbonate rocks, this study has relevant implications for other karst regions as it underscores the influence of WWTP effluents on the carbon cycle in karst rivers. Such information and knowledge are valuable for monitoring and managing effluent-receiving river in other karst regions in the world.

Effects of dissolved organic carbon on potentially toxic element desorption in stormwater bioretention systems

Stormwater runoff contains dissolved organic carbon (DOC) and potentially toxic elements (PTEs). Interactions between DOC and PTEs can impact PTE speciation and mobility, but are not fully understood. Soil samples were collected from a vegetated bioretention bed to investigate the effects of DOC (0, 15, and 50 mg-C/L) on the desorption of 10 PTEs captured by the soil media: Mn, Fe, Co, Cu, Zn, As, Cd, Sn, Sb, and Pb. In the absence of DOC, the desorbed PTE concentration from bioretention media into the aqueous phase ranking was as follows: Fe > Mn ∼ Zn > Cu > Pb > Sb > As > Co > Sn ∼ Cd. Increased DOC concentrations resulted in a reduction of the soil-water distribution coefficient (Kd) values. The greatest shift in Kd was observed for Cu and lowest for Sb. The PTE sorption capacities were lower for surficial soil samples (lower Kd) compared to the deep soil samples. Overall, the desorbed PTE (average midchannel 55.7 μg/g) fraction accounted for <1.1 % of the total extracted PTEs (5364 μg/g), and while this is a small percentage of the total, this is the fraction that is mobile. The extracted PTE fractions revealed that DOC reduced the organic matter-bound and carbonate-bound fractions. The PTE desorption trends suggest that reducing DOC in stormwater runoff could be an effective measure to mitigate the release of PTEs into the environment.

Modelling terrigenous DOC across the north west European Shelf: Fate of riverine input and impact on air-sea CO2 fluxes

Terrigenous carbon in aquatic systems is increasingly recognised as an important part of the global carbon cycle. Despite this, the fate and distribution of terrigenous dissolved organic carbon (tDOC) in coastal and oceanic systems is poorly understood. We have implemented a theoretical framework for the degradation of tDOC across the land to ocean continuum in a 3D hydrodynamical-biogeochemical model on the North West European Shelf. A key feature of this model is that both photochemical and bacterial tDOC degradation rates are age dependant constituting an advance in our ability to describe carbon cycling in the marine environment. Over the time period 1986-2015, 182±17 Gmol yr-1 of riverine tDOC is input to the shelf. Results indicate that bacterial degradation is by far the most important process in removing tDOC on the shelf, contributing to 73±6 % (132±11 Gmol yr-1) of the total removal flux, while 21±3 % (39±6 Gmol yr-1) of riverine tDOC was advected away from the shelf and photochemical degradation removing 5±0.5 % of the riverine flux. Explicitly including tDOC in the model decreased the air-sea carbon dioxide (CO2) flux by 112±8 Gmol yr-1 (4±0.4 %), an amount approximately equivalent to the CO2 released by the UK chemical industry in 2020. The reduction is equivalent to 62 % of the riverine tDOC input to the shelf while approximately 17 % of riverine input is incorporated into the foodweb. This work can improve the assumptions of the fate of tDOC by Earth System Models and demonstrates that the inclusion of tDOC in models can impact ecosystem dynamics and change predicted global carbon budgets for the ocean.

Influence of water color and catchment lake cover on stream macroinvertebrate communities: Ecological insights into browning effects

Browning of streams due to increased export of dissolved organic carbon (DOC) and iron has been observed in vast areas of the northern hemisphere with likely adverse ecological effects. Lake basins in stream catchments can moderate DOC export and influence stream communities, which complicates understanding of the effects of DOC. In this study, we explored the independent and interactive effects of water color (proxy for DOC and iron) and catchment lake cover on benthic macroinvertebrate communities in 94 medium-sized boreal forest streams. We first investigated the role of lake basins and other catchment characteristics in controlling water color. We then studied the effects of water color and catchment lake cover on macroinvertebrate community composition, biodiversity, and functional feeding traits. Water color correlated negatively with catchment lake cover, whereas the correlation with peatland cover and drainage intensity was positive. PERMANOVA and GLS analyses indicated that both color and catchment lake cover had a distinct independent effect on invertebrate community composition and community attributes, without significant interactions. Color had an independent negative effect on EPT (Ephemeroptera, Plecoptera, Trichoptera) taxa richness irrespective of lake cover. Increasing water color had negative effect on relative abundance of grazer, but no significant effect on shredder trait, while lake cover had a negative effect on both of the traits. Lake cover exhibited a negative influence on collector-gatherers, and a positive effect on filter feeders, while the predators were positively affected by both factors. The results highlight that water color influences the community structure of boreal stream ecosystems, and the effects are similar regardless of catchment lake cover. Mitigation measures should be emphasized, aimed at reducing DOC and iron runoff, in land use planning and river basin management.

11-Deoxycorticosterone (DOC)'s Action on the Gill Osmoregulation of Juvenile Rainbow Trout (Oncorhynchus mykiss)

In aquaculture, stress can negatively affect fish growth. For years, the cortisol hormone has been thought to play both glucocorticoid and mineralocorticoid functions. Nevertheless, recent research has suggested that 11-deoxycorticosterone (DOC) released during stress could contribute to cortisol actions, though this process is still misunderstood. Here, we evaluated the DOC effects on physiological and early transcriptional responses by RNA-seq. Juvenile rainbow trout were treated with DOC and/or glucocorticoids (mifepristone) or mineralocorticoid (eplerenone) receptor antagonists. Subsequently, plasma was collected, and cDNA libraries were generated from the gills of vehicle (control), DOC, mifepristone, mifepristone with DOC, eplerenone, and eplerenone with DOC groups. Calcium and phosphate levels in plasma were changed. Results revealed 914 differentially expressed transcripts (DETs) induced by DOC compared with control, mainly associated with sodium ion transmembrane transport, gluconeogenesis, negative regulation of transmembrane transport, and activation of innate immune response. DOC versus eplerenone with DOC comparison displayed 444 DETs related to cell-cell junction organization, canonical glycolysis, positive regulation of immune response, and potassium ion transport. Conversely, no DETs were detected in DOC versus mifepristone with DOC comparison. These data suggest that DOC has a relevant role in gill stress response and ion transport, which is differentially regulated by mineralocorticoid receptors.

Making waves: The sensitivity of lakes to brownification and issues of concern in ecological status assessment

Brownification or increasing water colour is a common problem in aquatic ecosystems. It affects both physico-chemical properties and biotic communities of the impacted waters. A common view is that lakes having low background water colour are most sensitive to brownification. In this article, we show that although low-colour and high-colour lakes respond differently to brownification, the effects on biotic communities can be strong irrespective of water colour. For phytoplankton production, the effect of brownification can be positive at low colour and negative at high colour, the relative effect being strongest at high colour. For fish foraging, the disturbance per increasing unit of colour may also be highest at high-colour conditions. Additionally, the presently used classification systems mostly describe the effects of eutrophication and do not account for the effects of brownification. Studies on the whole colour range of lakes are needed and indicators used in the ecological status assessment of lakes must be developed to reveal the effects of brownification. Indicators distinguishing the effects of brownification from those of eutrophication are especially needed.

Mechanisms of 137Cs leaching based on long-term observations in forested headwater catchments in Yamakiya, Fukushima Prefecture, Japan

Dissolved radiocesium (mainly 134Cs and 137Cs) is thought to be leached mainly from suspended sediment in downstream rivers, while organic matter, such as leaf litter, contributes to catchments in forested headwater streams. It is also known that dissolved 137Cs in headwater streams exhibit seasonal variation with water temperature. Some mechanisms have been proposed as the causes: ionic competition of potassium ion (K+) and ammonium ion (NH4+), leaching associated with the decomposition of organic matter, and thermodynamic adsorption-desorption processes. We investigated the relationship between K+ and the dissolved organic carbon (DOC) concentrations and seasonal changes in dissolved 137Cs concentration using a large number of samples from a headwater's small catchments. We examined temporal trends in 137Cs concentrations in coarse organic matter, suspended sediments, and dissolved forms at four sites (one decontaminated site and three undecontaminated sites) in the Yamakiya area since 2011. The distribution coefficients (Kdcss and Kdorg) of dissolved 137Cs concentrations relative to suspended sediment and coarse organic matter 137Cs concentrations were calculated, and differences in temporal changes due to decontamination were investigated. In addition, we examined the relationship between water temperature and DOC, K+, NH4+ and 137Cs concentrations in the headwater catchments. The suspended sediment 137Cs concentrations at the decontaminated headwater site (IBO) decreased significantly after decontamination and remained low thereafter. In contrast, dissolved 137Cs concentrations decreased temporarily during the decontamination period, but returned to pre-decontamination levels. Almost no NH4+ has been detected in headwater streams in our catchments. In the SET and ISH watersheds, where the distance from the groundwater spring is short, a correlation was found between DOC concentration and dissolved 137Cs concentration. In contrast, in the IBO watershed, where the distance from the groundwater spring is long, temperature dependence and a good correlation between K+ and 137Cs were observed. Therefore, microbial decomposition of organic matter may have a significant effect on the seasonal variation of dissolved 137Cs in forested headwater streams at short distances from the spring, but the influence of competing ions is expected to increase gradually as the water flows downstream.

Mapping turnover of dissolved organic carbon in global topsoil

Dissolved organic carbon (DOC), the labile fraction of organic carbon, is a predominant substrate for microbes. Therefore, the turnover of DOC dominates microbial respiration in soils. We compiled a global dataset (1096 data points) of the turnover rates of DOC in 0-30 cm soil profiles and integrated the data with a machine learning algorithm to develop a global map of DOC turnover rate in global topsoil. The global DOC turnover rate in 0-30 cm soil was averaged as 0.0087 day-1, with a considerable variation among biomes. The fastest DOC turnover rate was found in tropical forests (0.0175 day-1) and the lowest in tundra (0.0036 day-1), exhibiting a declining trend from low to high latitudes. The DOC turnover rate is primarily controlled by edaphic and climate factors, as confirmed by the analyses with the structural equation model and the Mental's test. With a machine learning algorithm, we produced global maps of DOC turnover rate at a monthly scale, which were further combined with a global dataset of DOC density to produce monthly maps of carbon mineralization from DOC turnover in topsoil. The annual carbon release from DOC was estimated as 27.98 Pg C year-1 from topsoil across the globe, with the largest contribution from forest biomes, followed by pasture and grassland. Tundra released the least carbon from DOC due to its low turnover rate suppressed by low temperatures. The biome- and global-scale information of DOC turnover rate and carbon release from DOC provide a benchmark for ecosystem models to better project soil carbon dynamics and their contributions to global carbon cycling in the changing environment.

Method development and validation of unbound saccharide content (serogroup A, C, Y, W, X) in novel pentavalent meningococcal polysaccharide conjugate vaccine with two different carrier proteins

Exclusive DOC-HCl formulations were developed for free polysaccharide content estimation in Meningococcal serogroup A, C, Y, W and X from pentavalent meningococcal vaccine (A, C, Y, W, X). The DOC precipitation method reported herein stands as an alternative to the ultra-filtration method for free polysaccharide estimation. DOC content was optimized for all the serogroups at a single concentration, where as effective acid concentration was altered as per serogroup. Briefly, two DOC-HCl formulations were developed for intended purpose, one for TT conjugated serogroups Men A & Men X where as other for CRM conjugated serogroups Men C, Men Y and Men W with effective HCl concentration of 23 mM and 193 mM for precipitation of Protein-DOC complex respectively. Furthermore, an exclusive buffer/DOC-HCl formulation for estimation of Men X free polysaccharide in fill finished product was developed. Accuracy of the method was proven at 12.5 %, 25 %, 50 % and 100 % of test specification where recoveries were found in the range of 70-130 %. In case of repeatability, intra assay variation ranged from 2 % to 7 % whereas inter assay variation was noted to be 2-14 %. Specificity studied revealed no interference of assay components such as sample excipients, DOC, acids. Critical quality and stability-indicating characteristics were measured. Monovalent polysaccharide standards of Men A, C, Y, W and X were developed and assigned the unitage concentration 1.01, 1.10, 1.09, 1.08 and 1.00 mg/mL respectively. Linearity curve was optimized from 0.17 to 27 µg/mL for Men A and C whereas from 0.33 to 27 µg/mL for Men Y and W considering free polysaccharide content estimation. The study suggests that DOC-HCl method meets all the criteria for free polysaccharide estimation in multivalent vaccines with additional advantages of high throughput and sized independent separation hence can be used for quality control testing.

Untargeted Metabolomic Analyses of Body Fluids to Differentiate TBI DOC and NTBI DOC

OBJECTIVE

To investigate the metabolomic differences between Traumatic brain injury (TBI) disorder of consciousness (DOC) patients and non-traumatic brain injury (NTBI) DOC patients by using cerebrospinal fluid (CSF), serum and urine samples beneficial to understand the pathological mechanism differences between the two etiologies, provide potential clues for the subsequent treatment and prognosis, and investigate the metabolome differences and similarities between TBI and NTBI among three different body fluids.

METHODS

In total, 24 TBI DOC subjects and 29 NTBI DOC subjects were enrolled. CSF, serum and urine samples from TBI DOC and NTBI DOC patients were collected and analyzed by performing UPLC-MS. The statistical methods and pathway analyses were applied to discover potential biomarkers and altered metabolic functions.

RESULTS

When comparing TBI DOC and NTBI DOC, 36, 31 and 52 differential metabolites were obtained in CSF, serum and urine, respectively. The functional analysis of differential metabolites obtained in CSF, serum and urine were all related to amino acid metabolism. Except for amino acid metabolism, metabolic biomarkers in CSF, serum and urine mainly focus on central function, cognitive function, necrosis and apoptosis and neurological function, respectively. In CSF, the highest AUC was 0.864 (Isoproturon) and 0.816 (Proline betaine). Then, the AUC of NFurfurylformamide in serum was 0.941, while the AUC of Dihydronepetalactone and Doxepin N-oxide glucuronide were 1.0 in urine.

CONCLUSION

CSF, serum and urine metabolomic analyses could differentiate TBI DOC from NTBI DOC and functional analyses showed a metabolic change difference between TBI DOC and NTBI DOC.

Transformation of dissolved organic matter and related arsenic mobility at a surface water-groundwater interface in the Hetao Basin, China

Porewater arsenic mobility above the groundwater table has been recognized as a potential cause of arsenic-rich groundwater, but the processing pathways of dissolved organic matter (DOM) in that hyporheic zone and their effect on porewater arsenic release remain poorly understood. To address these issues, two porewater profiles were sampled in a surface water-groundwater interaction zone from the Hetao Basin, China, to monitor the porewater geochemistry and DOM molecular characteristics. The results show that the porewater arsenic, Fe(II), and DOC concentrations were all significantly higher than those of the intruding pond water, and were located above the conservative mixing model lines. This indicates a net release of these solutes from the sediment. By comparing the porewater with pond water DOM, we found that the carboxyl-rich alicyclic molecules (CRAM) were selectively preserved, carbohydrates and aliphatics/proteins were preferentially consumed, and low O/C-ratio compounds with high bioproduction index (I_bioprod) and terrestrial index (I_terr) were produced. The transformation of CHO to CHOS compounds also represented a pathway of recalcitrant DOM production. The produced recalcitrant organic compounds mostly contributed to the elevated porewater DOC concentrations, but their contribution decreased along the filtration path. The consumption of labile DOM compounds would be responsible for Fe(III) hydroxide reduction and arsenic release. The generated recalcitrant DOM may also be a driver of porewater arsenic mobility by acting as electron shuttles. This study highlights the importance of the hyporheic zone in shaping shallow groundwater DOM composition and the potential contribution to arsenic enrichment.

Evaluating the effect of spinal cord stimulation on patient with disorders of consciousness: A TMS-EEG study

OBJECTIVE

The application of spinal cord stimulation (SCS) in the treatment of disorders of consciousness (DOC) has attracted attention, but its effect on brain activity is still unknown. Transcranial magnetic stimulation combined with EEG (TMS-EEG) can measure cortical activity, which can evaluate the effect of SCS on DOC.

METHODS

We record 20 DOC patients' CRS-R values and TMS-EEG data before and after one-session SCS (Pre-SCS and Post-SCS). 20 DOC patients including 10 patients with unresponsive wakefulness syndrome (UWS) and 10 patients with minimally conscious states (MCS). TMS evoked potential (TEP) was used to measure the changes of cortical activity in DOC patients between Pre-SCS and Post-SCS. Firstly, we used the global mean field potential (GMFP) and fast perturbational complexity index (PCIst) to compare the temporal changes of patients' cortical activity. Then, we obtained the frequency feature (natural frequency, NF) based on the TEP time-frequency analysis, and compared the changes of natural frequency between Pre-SCS and Post-SCS. Finally, the study explored the relationship between the patient's baseline CRS-R values and changes of TMS evoked cortical activity in time and frequency domains.

RESULTS

After SCS, MCS and UWS groups almost have no changes of CRS-R values (MCS: 9.9 ± 1.52 at Pre-SCS, 10.2 ± 1.48 at Post-SCS; UWS: 5.6 ± 1.26 at Pre-SCS, 5.7 ± 1.34 at Post-SCS). MCS group showed significant increases of GMFP amplitude (around 100 ms and 300 ms) and PCIst values at Post-SCS (p < 0.05). UWS group had no significant changes (p > 0.05). Besides, SCS induced the significant increases of natural frequency for MCS group(p < 0.05), but not for UWS group. At last, the study found that all patient's baseline CRS-R values were significantly correlated with ΔPCIst (r = 0.67, p < 0.005), and ΔNF (r = 0.72, p < 0.001).

CONCLUSIONS

SCS can modulate cortical activity of DOC patient, including temporal complexity and natural frequency. The changes of cortical activity caused by SCS are related to patients' consciousness level. TMS-EEG can evaluate the effect of SCS on DOC patients.

Safety and therapeutic effects of personalized transcranial direct current stimulation based on electrical field simulation for prolonged disorders of consciousness: study protocol for a multi-center, double-blind, randomized controlled trial

Background

Disorders of consciousness (DOC) resulting from acquired brain injury (ABI) increase the mortality rate of patients, complicate rehabilitation, and increase the physical and economic burden that DOC imposes on patients and their families. Thus, treatment to promote early awakening from DOC is vital. Transcranial direct current stimulation (tDCS) has shown great potential for promoting neuro-electrochemical activity. However, previous tDCS studies did not consider structural damage or head and brain lesions, so the applicability of the results to all DOC patients was limited. In this study, to establish a patient-specific tDCS treatment plan considering the brain lesions of and damage sustained by DOC patients, we considered the electric field calculated by a the "finite electric" three-dimensional brain model based on magnetic resonance images. This protocol was developed to aid tDCS treatment of actual patients, and to verify its safety and effectiveness.

Methods/design

Twenty-four patients with DOC after ABI will be enrolled in this cross-over trial. All participants will receive typical rehabilitation combined with sham tDCS and typical rehabilitation plus personalized tDCS (P-tDCS). Each interventional period will last 2 weeks (30 min/day, 5 days/week). The primary outcome [score on the Korean version of the Coma Recovery Scale-Revised (K-CRS-R)] will be assessed at baseline and the end of the first day of the intervention. Secondary outcomes (K-CRS-R at 1 week and 2 weeks after experimental session and quantitative EEG changes quantitative electroencephalography changes) will be measured at baseline and the end of week 4. Adverse events will be recorded during each treatment session.

Discussion

For patients with neurological disorders, tDCS has served as a painless, non-invasive, easily applied, and effective therapy for several decades, and there is some evidence that it can improve the level of consciousness of patients with DOC. However, variability in the effects on consciousness among subjects have been reported and personalized strategies are lacking. This protocol is for a randomized controlled trial designed to validate the effectiveness and safety of P-tDCS combined with typical rehabilitation for DOC.

Clinical trial registration

https://cris.nih.go.kr, identifier KCT0007157.

Top-down and bottom-up control of phytoplankton communities by zebra mussels Dreissena polymorpha (Pallas, 1771)

Zebra mussels (ZM), Dreissena polymorpha (Pallas, 1771), are one of the most aggressive invasive species. ZM have a strong bidirectional impact on phytoplankton because of their high nutrient excretion rates and high grazing pressure. Furthermore, the interactions between excretion and selective grazing are related to the trophic status of a waterbody and could cause unpredictable changes in phytoplankton. We performed three types of experiments: (i) bottom-up where we measured ZM excretion rates; (ii) top-down where we analyzed the effects of ZM on phytoplankton taxonomic structure via grazing in different trophic conditions; (iii) mesocosm experiment where we estimated the combined top-down and bottom-up effects of ZM on phytoplankton assemblages under different trophic conditions. Our first experiment confirmed high excretion rates of dissolved nutrients (PO₄^3- and NH₄⁺) and dissolved organic carbon (DOC) by ZM. The other experiments revealed selective grazing by ZM, where diatoms were mostly selectively rejected, while green algae were preferred. In the top-down experiment, ZM decreased the total biomass of phytoplankton, while in mesocosm experiments where top-down and bottom-up controls acted simultaneously, we observed increased phytoplankton biomass mainly through increases in filamentous green algae. Our experiments show that ZM can influence phytoplankton through a combination of bottom-up and top-down effects that vary with trophic state.

Removable carbon and storage carbon of golden tides

Due to ever-increasing global warming, ocean acidification, and inshore eutrophication, the outbreak of golden tides with Sargassum horneri has increased in the Yellow sea, where the biomass carbon enters three main carbon pathways: a. Removal of carbon from seawater by salvage, known as removable carbon; b. Biomass carbon is deposited to the seafloor through POC and RDOC through Biological Carbon Pump and Microbial Carbon Pump; c. Re-entering the carbon cycle through the food chain or re-entering the atmosphere through the action of microbes. Estimating carbon fixation (removable carbon) and storage (particulate organic carbon (POC) and refractory dissolved organic carbon (RDOC)) is vital in studying the global carbon cycle. In this research, it was observed that the C content of S. horneri was high, and the utilization rate of dissolved organic carbon (DOC), RDOC, and POC was also high in the eutrophication environment, where only 2.71 % of algal biomass carbon was converted to RDOC, and only 0.20 % converted to POC. The C + N + P combination has a restart effect on the seasonal accumulation of RDOC in relevant sea areas. It is suggested that the salvage and resource utilization should be strengthened to effectively control the golden tide and reduce the substantial economic losses to realize the win-win situation of carbon sink and environmental restoration.

Artificial neural network implementation for dissolved organic carbon quantification using fluorescence intensity as a predictor in wastewater treatment plants

Although spectroscopic methods provide a fast and cost-effective means of monitoring dissolved organic carbon (DOC) in natural and engineered water systems, the prediction accuracy of these methods is limited by the complex relationship between optical properties and DOC concentration. In this study, we developed DOC prediction models using multiple linear/log-linear regression and feedforward artificial neural network (ANN) and investigated the effectiveness of spectroscopic properties, such as fluorescence intensity and UV absorption at 254 nm (UV₂₅₄), as predictors. Optimum predictors were identified based on correlation analysis to construct models using single and multiple predictors. We compared the peak-picking and parallel factor analysis (PARAFAC) methods for selecting appropriate fluorescence wavelengths. Both methods had similar prediction capability (p-values >0.05), suggesting PARAFAC was not necessary for choosing fluorescence predictors. Fluorescence peak T was identified as a more accurate predictor than UV₂₅₄. Combining UV₂₅₄ and multiple fluorescence peak intensities as predictors further improved the prediction capability of the models. The ANN models outperformed the linear/log-linear regression models with multiple predictors, achieving higher prediction accuracy (peak-picking: R² = 0.8978, RMSE = 0.3105 mg/L; PARAFAC: R² = 0.9079, RMSE = 0.2989 mg/L). These findings suggest the potential to develop a real-time DOC concentration sensor based on optical properties using an ANN for signal processing.

Dynamics of dissolved organic carbon during drought and flood events: A phase-by-stages perspective

Dissolved organic carbon (DOC) is a key water quality parameter that plays a crucial role in controlling aquatic ecosystems and carbon cycling. Understanding DOC dynamics during hydrological extremes (i.e., droughts and floods) helps in managing water quality, but such variability is rarely studied. Furthermore, how differences in DOC concentrations among phase-by-stages of drought/flood affect simulation performances based on hydrological features remains unclear. Here, phase-by-stages of hydrological drought (flood) were divided into intensification (rising) and recovery (falling) periods based on drought peak intensity (flood peak intensity). The long-term (1976-2019) daily discharge and weekly (biweekly) DOC concentrations from four headwater streams with different watershed sizes (from 9.97 to 119.09 ha) in south-central Ontario, Canada, were used to achieve the above aims. The results showed that (i) the average DOC concentration during intensification (rising) stage of drought (flood) was smaller (larger) than during recovery (falling). (ii) Simulations performed better when accounting for phase-by-stages of drought/flood, with reductions in mean absolute percentage error of 32.85 % and 53.59 % for drought and flood events, respectively. These results will help understand the dynamics of DOC during hydrological extremes and improve simulation performance of numerical models for water quality parameters under changing environmental conditions.

Storm pulse responses of fluvial organic carbon to seasonal source supply and transport controls in a midwestern agricultural watershed

Storm events are the primary mechanisms of delivering fluvial organic carbon (OC) in both dissolved (DOC) and particulate (POC) forms but their sources and flow pathways can vary with seasonal land use and weather. Within the low relief and poorly drained landscapes of a predominantly agricultural watershed in Eastern Iowa, six storm events were monitored for DOC and POC concentrations over a two hydrological year period in order to investigate the export mechanisms, landscape connectivity, and hydro-climatological controls of fluvial OC under representative events and associated management practices. Event-driven dynamics favored POC over DOC, where POC accounted for 54-94 % of total OC export during events, highlighting a sampling-driven bias against POC in the absence of event monitoring. The disparity between POC and DOC export exhibited a seasonal effect, where the POC:DOC export ratio was low (1.3-1.7) for October events while June/July events yielded a much higher value (up to a value of 14.7). The relationships between event DOC and POC export, Normalized Difference Vegetation Index of landscapes, and antecedent wetness conditions suggest a strong interaction or competing influences between vegetation coverage and runoff-generation threshold. While we recognize the low statistical power of the limited data set (n = 6), the storm events could be binned into two clusters: a "bare soil" period and a crop "rapid growth" period. Specifically, intra-storm variations in OC concentration and concentration-discharge (C-Q) hysteresis patterns demonstrated a seasonally-dependent access to contributing OC sources, which can be viewed as the rapid liberation of DOC during the "bare soil" period, and a progressive leaching of terrestrial DOC during the "rapid growth" period. Although high resolution event monitoring of fluvial carbon is rare this work highlights the importance of such efforts to predict C sourcing and transformation in inland water systems under variable land use and across seasons.

Key factors driving dissolved organic matter composition and bioavailability in lakes situated along the Eastern Route of the South-to-North Water Diversion Project, China

The Eastern Route of the South-to-North Water Diversion Project (SNWDP-ER) is a large scale multi-decade infrastructure project aiming to divert substantial amounts of water (≈45 billion m³ yr^-1) to alleviate water shortage in comparatively arid regions of northern China. The project has ramifications for hydrological connectivity and biogeochemical cycling of dissolved organic matter (DOM) in regional lakes affected by the project. We carried out an extensive field sampling campaign along the SNWDP-ER in different hydrological seasons of 2018 and monthly observations in Lake Hongze and Lake Luoma from April 2018 to June 2021. We found the lakes connecting to the SNWDP-ER had higher mean DOC, specific UV absorbance, higher ratio of humic-like to protein-like fluorophores (Humic : Protein), and shallower spectral slope (S_275-295) in the wet season compared to the wet-to-dry transition, and dry seasons. The southern lakes and Yangtze River had lower DOC concentration, bioavailable DOC (BDOC), and higher DOM aromaticity compared to the northern two downstream lakes. Ultrahigh-resolution mass spectrometry (FT-ICR MS) revealed higher relative abundance of CHO-containing and aromatic compounds in the Yangtze River and the southern three upstream lakes compared to the northern two lakes. The data from Lake Hongze and Lake Luoma, studied in different hydrological seasons, suggest that water delivery had high consistency in DOM composition and BDOC over the season. We conclude that positioning along the watercourse and seasonally variable hydrological conditions play an important role in influencing the DOM composition and bioavailability of key lakes connecting to the SNWDP-ER. Our results indicated that the water diversion project delivers water with low DOC concentration and higher aromaticity and thus is of higher quality since it has higher DOM removal potential during drinking water treatment.

An examination of the influence of drained peatlands on regional stream water chemistry

Currently, 50% of Irish rivers do not meet water quality standards, with many declining due to numerous pressures, including peatland degradation. This study examines stream water quality in the Irish midlands, a region where raised bogs have been all historically disturbed to various extent and the majority drained for industrial or domestic peat extraction. For the first time, we provide in-depth analysis of stream water chemistry within a heavily modified bog landscape. Small streams from degraded bogs exhibited greater levels of pollutants, in particular: total dissolved nitrogen (0.48 mg/l) and sulphate (18.49 mg/l) as well as higher electrical conductivity (mean: 334 μS/cm) compared to similar bog streams in near-natural bogs. Except for site-specific nitrogen pollution in certain streams surrounding degraded peatlands, the chemical composition of the receiving streams did not significantly differ between near-natural and degraded sites, reflecting the spatio-temporal scales of disturbance in this complex peat-scape. Dissolved organic carbon concentrations in all the receiving streams were high (27.2 mg/l) compared to other Irish streams, even within other peatland catchments. The region is experiencing overall a widespread loss of fluvial nitrogen and carbon calling for (a) the development of management instruments at site-level (water treatment) and landscape-level (rewetting) to assist with meeting water quality standards in the region, and (b) the routine monitoring of water chemistry as part of current and future peatland management activities.

Supplementary Information

The online version contains supplementary material available at 10.1007/s10750-023-05188-5.

Enrichment and analysis methods for trace dissolved organic carbon in reverse osmosis effluent: A review

Reverse osmosis (RO) is an essential unit for producing high-quality ultrapure water. The increasingly severe water shortage and water quality deterioration result in reclaimed water as an alternative source for ultrapure water production. However, when using reclaimed water as water sources, the dissolved organic carbon (DOC) in RO permeate exhibits higher concentration and more sophisticated components than when using clean water sources, thus affecting the effluent quality of ultrapure water and the effectiveness of subsequent treatment processes. To optimize the treatment processes, it is crucial to analyze the components of DOC. This review summarizes the enrichment and analysis methods of trace organic matter, and provides recommendations for the analysis and characterization of DOC in RO permeate. The study summarizes the operating conditions and enrichment properties of different enrichment methods, including solid-phase extraction, liquid-liquid extraction, purge-and-trap, lyophilization and rotary evaporation for low-concentration organic compounds, compares the applicability and limitations of different enrichment methods, and proposes the principles for the selection of enrichment methods. In this review, we discuss the application of mass spectrometry (including Fourier transform ion cyclotron resonance mass spectrometry) in the analysis of DOC components, and focus on data processing as the key procedure in analysis of DOC in RO permeate. Despite the advantages of mass spectrometry, an applicable workflow and open-source database are required to improve the reliability of the analysis. The treatability properties of DOC are suggested to be determined by analyzing the component characteristics or in combination with common removal techniques. This study provides theoretical support for a comprehensive analysis of DOC in RO permeates to improve the removal effect.

Degradation of commercial biodegradable plastics and temporal dynamics of associated bacterial communities in soils: A microcosm study

Biodegradable plastics (BDPs) have been introduced to replace conventional fossil-based non-biodegradable plastics in agricultural production to reduce the accumulation of plastic debris in soils. However, the degradation performance of commercially available BDP products in real soils and the response of soil microbial communities to biodegradation remain unclear. Here, we explored the degradation characteristics of a commercial BDP product (made from starch, polylactic acid (PLA) and polybutylene adipate terephthalate (PBAT)) in different soils in a microcosm system over a period of 360 days. Temporal dynamics of associated bacterial communities in different soil niches (control soil, plastic surface soil and bulk soil (soil without close contact with plastics)) were profiled. Weight loss reached 42.0±1.2% to 48.0±2.2% in different soils after 360 days. The degradation of BDP followed the same pattern in different soils characterized by two distinct stages. In the first stage (day 0-30), BDPs experienced major weight loss (35.8-41.9%) which coincided with a drastic increase in the soil dissolve organic carbon (1.53-2.25 times the control soil) and the forming of distinct bacterial communities in the plastic surface soil. Thermalgravimetric analysis (TGA) and fourier transform infrared (FTIR) analysis confirmed the fast depletion of starch in this stage. In addition, observations with naked eyes and scanning electron microscope confirmed intensive microbial colonization on BDP surfaces. In the second stage (day 30-360), the degradation of remaining PLA and PBAT continued at a relatively slow rate. Meanwhile bacterial communities in the plastic surface soil started to gradually recover from the disturbance caused by fast biodegradation in the first stage in a soil-dependent manner. Our findings indicate that the degradation performance of BDPs was limited by the degradation rate of relatively recalcitrant components and the temporal dynamics of associated soil bacterial communities synchronized with the degradation of BDPs.

Conditional remediation performance of wheat straw biochar on three typical Cd-contaminated soils

Undoubtedly biochar has excellent remediation performance for Cd-contaminated soil. Nevertheless, the remediation performance may be not invariable considering highly variable soil conditions including soil properties and environmental conditions. This work investigated the fate of Cd in three typical Cd-contaminated soils (acidic, neutral and saline-alkali soils) treated with wheat straw biochar and its driving mechanisms under specific soil conditions through aging and remediation experiment, Cd availability experiment and leaching column experiment. The results indicated that biochar addition facilitated Cd immobilization and reduced the uptake of Cd by green vegetables in acidic, neutral and saline-alkali soils under wetting-drying conditions. In contrast to neutral and saline-alkali soils, the release of exchangeable aluminum from biochar-treated acidic soil under flooding-drying cycles lowered the pH of leachate, thus promoting the leaching of Cd from leaching column, especially at 7 and 14 days, when the leaching of Cd increased by 25.3 and 32.6 times, respectively. This result was further supported by the increase in the exchangeable fraction and total leaching amounts of Cd in the topsoil layer (0-20 cm) of biochar-treated acidic soil of leaching column. Additionally, the leaching of Cd was positively correlated with DOC contents of leachate in biochar-treated neutral and saline-alkali soils. In summary, the remediation performance of biochar for Cd-contaminated soils is conditional, and its remediation effect is better in neutral and saline-alkali soils. Notably, the inherent conditions of soil must be fully considered when applying biochar for Cd remediation, especially in acidic Cd-contaminated paddy soils in South China.

Effect of 11-Deoxycorticosterone in the Transcriptomic Response to Stress in Rainbow Trout Skeletal Muscle

In aquaculture, many stressors can negatively affect growth in teleosts. It is believed that cortisol performs glucocorticoid and mineralocorticoid functions because teleosts do not synthesize aldosterone. However, recent data suggest that 11-deoxycorticosterone (DOC) released during stress events may be relevant to modulate the compensatory response. To understand how DOC modifies the skeletal muscle molecular response, we carried out a transcriptomic analysis. Rainbow trout (Oncorhynchus mykiss) were intraperitoneally treated with physiological doses of DOC in individuals pretreated with mifepristone (glucocorticoid receptor antagonist) or eplerenone (mineralocorticoid receptor antagonist). RNA was extracted from the skeletal muscles, and cDNA libraries were constructed from vehicle, DOC, mifepristone, mifepristone plus DOC, eplerenone, and eplerenone plus DOC groups. The RNA-seq analysis revealed 131 differentially expressed transcripts (DETs) induced by DOC with respect to the vehicle group, mainly associated with muscle contraction, sarcomere organization, and cell adhesion. In addition, a DOC versus mifepristone plus DOC analysis revealed 122 DETs related to muscle contraction, sarcomere organization, and skeletal muscle cell differentiation. In a DOC versus eplerenone plus DOC analysis, 133 DETs were associated with autophagosome assembly, circadian regulation of gene expression, and regulation of transcription from RNA pol II promoter. These analyses indicate that DOC has a relevant function in the stress response of skeletal muscles, whose action is differentially modulated by GR and MR and is complementary to cortisol.

Seasonal variations of natural organic matter (NOM) in surface water supplied to two coal-fired power stations

Global issues such as pollution and global warming have resulted in changes in water characteristics over the past 20 years. Natural organic matter (NOM) which is a major component in water systems has shown an increase globally. This increase in NOM concentration has negatively affected both water treatment processes and drinking water quality. It is subsequently critical to understand the seasonal variations and composition of NOM to be able to address issues related to NOM. In this study, techniques such as ultraviolet-visible spectroscopy, total organic carbon and liquid chromatography-organic carbon detection (LC-OCD) were used for characterisation and quantification of NOM. Two coal-fired power stations were selected for this study with each power station receiving water from a different source, i.e. power station A receives water from the Vaal River and power station B from the Nkomati River. Results from this study demonstrated that composition and concentration of NOM from these two water sources varied seasonally. Characterisation of NOM using the LC-OCD indicated that the different fractions of NOM, i.e. low molecular weight neutrals, low molecular weight acids, building blocks, humic substances and biopolymers, varied seasonally. The dissolved organic carbon concentration and specific ultraviolet absorbance values of the raw water at both power stations showed an increment amid the wet seasons and a decrease amid the dry seasons.

The impacts of whole-lake acidification and eutrophication on the accumulation of lead in sediments from manipulated lakes in the Experimental Lakes Area (IISD-ELA)

Acidification and eutrophication are common limnological stressors impacting many water bodies across the globe. While the negative impacts of these stressors on limnetic communities are generally known, their influence on the accumulation of specific sediment constituents, such as metals, remains unclear. Benefitting from past research and long-term monitoring, lakes at the International Institute for Sustainable Development - Experimental Lakes Area (IISD-ELA) in northwestern Ontario, Canada are invaluable to understand the extent to which these two common lake stressors can influence the accumulation of metals in lacustrine sediment. To address these issues, sediment cores were retrieved from six lakes: four were subjected to past experimental acidification or eutrophication and two were reference lakes. Focusing on elemental lead (Pb), a metal known to have accumulated in lake sediments worldwide and generally exhibiting a relatively small fraction of terrigenous input, we assessed the hypothesis that greater accumulation of Pb would be observed in lakes subjected to eutrophication, while the reverse was expected for lakes subjected to acidification experiments. Our analyses support this hypothesis, whereby relatively low enrichment was recorded in sediments deposited in the acidified lake during the manipulation era. On the other hand, eutrophied lakes demonstrated a strong enrichment in Pb during experimental manipulation. When investigating the mechanisms behind these divergent responses, we found epilimnetic dissolved organic carbon (DOC) and conductivity were associated with a relative increase in Pb accumulation in sediments. Acidic pH is also expected to mediate these responses by decreasing epilimnetic DOC concentrations leading to reduced Pb accumulation in the sediment.

Browning affects pelagic productivity in northern lakes by surface water warming and carbon fertilization

Global change impacts important environmental drivers for pelagic gross primary production (GPP) in northern lakes, such as temperature, light, nutrient, and inorganic carbon availability. Separate and/or synergistic impacts of these environmental drivers on pelagic GPP remain largely unresolved. Here, we assess key drivers of pelagic GPP by combining detailed depth profiles of summer pelagic GPP with environmental and climatic data across 45 small and shallow lakes across northern Sweden (20 boreal, 6 subarctic, and 19 arctic lakes). We found that across lakes summer pelagic GPP was strongest associated with lake water temperatures, lake carbon dioxide (CO₂ ) concentrations impacted by lake water pH, and further moderated by dissolved organic carbon (DOC) concentrations influencing light and nutrient conditions. We further used this dataset to assess the extent of additional DOC-induced warming of epilimnia (here named internal warming), which was especially pronounced in shallow lakes (decreasing 0.96°C for every decreasing m in average lake depth) and increased with higher concentrations of DOC. Additionally, the total pools and relative proportion of dissolved inorganic carbon and DOC, further influenced pelagic GPP with drivers differing slightly among the boreal, subarctic and Arctic biomes. Our study provides novel insights in that global change affects pelagic GPP in northern lakes not only by modifying the organic carbon cycle and light and nutrient conditions, but also through modifications of inorganic carbon supply and temperature. Considering the large-scale impacts and similarities of global warming, browning and recovery from acidification of lakes at higher latitudes throughout the northern hemisphere, these changes are likely to operate on a global scale.

Large-scale study on groundwater dissolved organic matter reveals a strong heterogeneity and a complex microbial footprint

Dissolved organic matter (DOM) in terrestrial groundwater is generally low in concentration compared to inland surface waters. However, the overall amount of groundwater DOM is huge, as there is 100 times more fresh groundwater than fresh surface water. To date, research on groundwater DOM has merely focused on specific threats to humans such as e.g. DOM and heavy metal complexations and DOM from hydrocarbon contamination. A comprehensive, large-scale study of groundwater is still missing. Here, we examine DOM properties in a large-scale approach with regards to surface characteristics such as land use and altitude, aquifer characteristics as well as microbial features. We analyzed 1600 water samples from 100 groundwater bodies all over Austria with regards to their DOM quantity, quality and bacterial abundance (BA). DOM quality was evaluated with self-organizing maps on fluorescence excitation-emission-matrices (EEMs) combined with Ward clustering and subsequent parallel factor analysis to describe DOM properties of each cluster. We evaluated how these clusters differed among each other, based on DOC and nitrate concentrations, BA and selected environmental characteristics. Our results show that fluorescence components in groundwater resemble components found in other groundwater studies, in studies from forest streams, the dark ocean, agricultural catchments and wastewater treatment plants. The latter fluorescence components were associated with a cluster that is characterized by agricultural and urban land use, as well as by high nitrate concentrations. Clusters with an increased abundance of high-molecular weight and humic components, commonly associated with vascular plant and soil origin, correlated with a higher bacterial abundance. This observation provides evidence that elevated numbers of suspended bacteria mainly originate from the surface. Our study shows that DOM fluorescence can be a fast monitoring tool to identify aquifers under anthropogenic stress and delineate sensitive recharge areas with high surface-groundwater interaction.

Landscape determinants of pelagic and benthic primary production in northern lakes

Global change affects gross primary production (GPP) in benthic and pelagic habitats of northern lakes by influencing catchment characteristics and lake water biogeochemistry. However, how changes in key environmental drivers manifest and impact total (i.e., benthic + pelagic) GPP and the partitioning of total GPP between habitats represented by the benthic share (autotrophic structuring) is unclear. Using a dataset from 26 shallow lakes located across Arctic, subarctic, and boreal northern Sweden, we investigate how catchment properties (air temperature, land cover, hydrology) affect lake physico-chemistry and patterns of total GPP and autotrophic structuring. We find that total GPP was mostly light limited, due to high dissolved organic carbon (DOC) concentrations originating from catchment soils with coniferous vegetation and wetlands, which is further promoted by high catchment runoff. In contrast, autotrophic structuring related mostly to the relative size of the benthic habitat, and was potentially modified by CO₂ fertilization in the subarctic, resulting in significantly higher total GPP relative to the other biomes. Across Arctic and subarctic sites, DIC and CO₂ were unrelated to DOC, indicating that external inputs of inorganic carbon can influence lake productivity patterns independent of terrestrial DOC supply. By comparison, DOC and CO₂ were correlated across boreal lakes, suggesting that DOC mineralization acts as an important CO₂ source for these sites. Our results underline that GPP as a resource is regulated by landscape properties, and is sensitive to large-scale global changes (warming, hydrological intensification, recovery of acidification) that promote changes in catchment characteristics and aquatic physico-chemistry. Our findings aid in predicting global change impacts on autotrophic structuring, and thus community structure and resource use of aquatic consumers in general. Given the similarities of global changes across the Northern hemisphere, our findings are likely relevant for northern lakes globally.

A Potential Prognosis Indicator Based on P300 Brain-Computer Interface for Patients with Disorder of Consciousness

For patients with disorders of consciousness, such as unresponsive wakefulness syndrome (UWS) patients and minimally conscious state (MCS) patients, their long treatment cycle and high cost commonly put a heavy burden on the patient's family and society. Therefore, it is vital to accurately diagnose and predict consciousness recovery for such patients. In this paper, we explored the role of the P300 signal based on an audiovisual BCI in the classification and prognosis prediction of patients with disorders of consciousness. This experiment included 18 patients: 10 UWS patients and 8 MCS- patients. At the three-month follow-up, we defined patients with an improved prognosis (from UWS to MCS-, from UWS to MCS+, or from MCS- to MCS+) as "improved patients" and those who stayed in UWS/MCS as "not improved patients". First, we compared and analyzed different types of patients, and the results showed that the P300 detection accuracy rate of "improved" patients was significantly higher than that of "not improved" patients. Furthermore, the P300 detection accuracy of traumatic brain injury (TBI) patients was significantly higher than that of non-traumatic brain injury (NTBI, including acquired brain injury and cerebrovascular disease) patients. We also found that there was a positive linear correlation between P300 detection accuracy and CRS-R score, and patients with higher P300 detection accuracy were likely to achieve higher CRS-R scores. In addition, we found that the patients with higher P300 detection accuracies tend to have better prognosis in this audiovisual BCI. These findings indicate that the detection accuracy of P300 is significantly correlated with the level of consciousness, etiology, and prognosis of patients. P300 can be used to represent the preservation level of consciousness in clinical neurophysiology and predict the possibility of recovery in patients with disorders of consciousness.

Is water quality in British rivers "better than at any time since the end of the Industrial Revolution"?

We explore the oft-repeated claim that river water quality in Great Britain is "better now than at any time since the Industrial Revolution". We review available data and ancillary evidence for seven different categories of water pollutants: (i) biochemical oxygen demand (BOD) and ammonia; (ii) heavy metals; (iii) sewage-associated organic pollutants (including hormone-like substances, personal care product and pharmaceutical compounds); (iv) macronutrients (nitrogen and phosphorus); (v) pesticides; (vi) acid deposition and (vii) other variables, including natural organic matter and pathogenic micro-organisms. With a few exceptions, observed data are scarce before 1970. However, we can speculate about some of the major water quality pressures which have existed before that. Point-source pollutants are likely to have increased with population growth, increased connection rates to sewerage and industrialisation, although the increased provision of wastewater treatment during the 20th century will have mitigated this to some extent. From 1940 to the 1990s, pressures from nutrients and pesticides associated with agricultural intensification have increased in many areas. In parallel, there was an increase in synthetic organic compounds with a "down-the-drain" disposal pathway. The 1990s saw general reductions in mean concentrations of metals, BOD and ammonia (driven by the EU Urban Waste Water Treatment Directive), a levelling out of nitrate concentrations (driven by the EU Nitrate Directive), a decrease in phosphate loads from both point-and diffuse-sources and some recovery from catchment acidification. The current picture is mixed: water quality in many rivers downstream of urban centres has improved in sanitary terms but not with respect to emerging contaminants, while river quality in catchments with intensive agriculture is likely to remain worse now than before the 1960s. Water quality is still unacceptably poor in some water bodies. This is often a consequence of multiple stressors which need to be better-identified and prioritised to enable continued recovery.

When water returns: Drying history shapes respiration and nutrients release of intermittent river sediment

Climate change and anthropogenic water demand have increased the frequency and duration of drying periods across rivers and streams worldwide. However, the biogeochemical processes during the water return in desiccated riverbeds are still unclear. Drying is a complex and diverse process and biogeochemical implications upon flow resumption may depend on attributes of the drying and river sediment characteristics (i.e., organic matter content [OM]). In order to understand the effect of drying duration and intensity on the biogeochemical dynamics following flow resumption, we exposed OM- and non-enriched river sediment from an intermittent river section to three different drying intensities (low: shade and rain; moderate: no shade and rain; high: no shade and no rain), each for three drying durations (10, 30 and 90 days). We determined the sediment-associated microbial respiration and dissolved organic carbon (DOC), ammonium‑nitrogen (NH₄-N), nitrate‑nitrogen (NO₃-N) and soluble reactive phosphorus (SRP) net release/retention rates of the nine drying treatments in flow-through microcosms over four days past flow resumption. Under the most intense and prolonged drying, non-enriched sediments showed a lag response in respiration on the first day after flow resumption, while all other treatments had either a linear increase or an early pulse in respiration. After 48 h, respiration remained constant, with minor changes in respiration dynamics regardless of the OM content of the sediment and drying attributes. The drying duration and intensity had greater effects on SRP release/retention soon after the flow resumption, while NH₄-N and NO₃-N release/retention rates were more strongly affected four days later. Our results suggest that drying attributes influence the biogeochemical dynamics more strongly during the first 24 h upon flow resumption. However, neither respiration nor nutrient dynamics recovered within four days to levels of the sediments before drying for any drying treatments. Hence, the atrributes of the drying have considerable implications in rivers biogeochemistry upon flow resumption.

Dark matters: Contrasting responses of stream biofilm to browning and loss of riparian shading

Concentrations of terrestrial-derived dissolved organic carbon (DOC) in freshwater ecosystems have increased consistently, causing freshwater browning. The mechanisms behind browning are complex, but in forestry-intensive regions browning is accelerated by land drainage. Forestry actions in streamside riparian forests alter canopy shading, which together with browning is expected to exert a complex and largely unpredictable control over key ecosystem functions. We conducted a stream mesocosm experiment with three levels of browning (ambient vs. moderate vs. high, with 2.7 and 5.5-fold increase, respectively, in absorbance) crossed with two levels of riparian shading (70% light reduction vs. open canopy) to explore the individual and combined effects of browning and loss of shading on the quantity (algal biomass) and nutritional quality (polyunsaturated fatty acid and sterol content) of the periphytic biofilm. We also conducted a field survey of differently colored (4.7 to 26.2 mg DOC L^-1 ) streams to provide a 'reality check' for our experimental findings. Browning reduced greatly the algal biomass, suppressed the availability of essential polyunsaturated fatty acids, especially eicosapentaenoic acid (EPA), and sterols, but increased the availability of terrestrial-derived long-chain saturated fatty acids (LSAFA). In contrast, loss of shading increased primary productivity, which resulted in elevated sterol and EPA contents of the biofilm. The field survey largely repeated the same pattern: biofilm nutritional quality decreased significantly with increasing DOC, as indicated particularly by a decrease of the ω-3:ω-6 ratio and increase in LSAFA content. Algal biomass, in contrast, was mainly controlled by dissolved inorganic nitrogen (DIN) concentration, while DOC concentration was of minor importance. The ongoing browning process is inducing a dramatic reduction in the nutritional quality of the stream biofilm. Such degradation of the major high-quality food source available for stream consumers may reduce the trophic transfer efficiency in stream ecosystems, potentially extending across the stream-forest ecotone.

Removal of chromophoric dissolved organic matter under combined photochemical and microbial degradation as a response to different irradiation intensities

Throughout the freshwater continuum, Dissolved Organic Carbon (DOC) and the colored fraction, Chromophoric Dissolved Organic Material (CDOM), are continuously being added, removed, and transformed, resulting in changes in the chromophoricity and lability of organic matter over time. We examined, experimentally, the effect of increasing irradiation-intensities on the combined photochemical and microbial degradation of CDOM and DOC. This was done by using a simulated mixed water column: aged water from a humic lake was exposed to four irradiation-intensities - representing winter, early and late spring, and summer conditions (0.10, 0.16, 0.36, and 0.58 W/m²) - and compared with dark controls over 37 days. We found a linear relationship between CDOM degradation and irradiation-intensities up to 0.36 W/m²; the degradation rate saturated at higher intensities, both at specific wavelengths and for broader intervals. After 37 days at high irradiation-intensity, CDOM absorption of irradiation at 340 nm had been reduced by 41%; 48% of DOC had been removed and DOC degradation continued to increase. Aromaticity (SUVA₂₅₄) declined significantly over 37 days at the two lowest but not at the two highest UV- intensities; levels in unexposed control water remained constant. Direct observations of the humic lake showed that CDOM absorption of irradiation (340 nm) declined by 27% from winter to summer. A model based on hydrological CDOM input and CDOM degradation calculated from field measurements of UV-radiation and experimental CDOM degradation with UV-exposure from sunlight accurately predicted the annual course as observed in the lake. With no external CDOM input, 92% of the CDOM could be degraded in a year. The results support the notion that combined photochemical and microbial CDOM degradation can be remarkably higher in lakes than previously thought and that humic lakes retain their color due to light absorption by ongoing CDOM input.

Global change and physiological challenges for fish of the Amazon today and in the near future

Amazonia is home to 15% (>2700, in 18 orders) of all the freshwater fish species of the world, many endemic to the region, has 65 million years of evolutionary history and accounts for 20% of all freshwater discharge to the oceans. These characteristics make Amazonia a unique region in the world. We review the geological history of the environment, its current biogeochemistry and the evolutionary forces that led to the present endemic fish species that are distributed amongst three very different water types: black waters [acidic, ion-poor, rich in dissolved organic carbon (DOC)], white waters (circumneutral, particle-rich) and clear waters (circumneutral, ion-poor, DOC-poor). The annual flood pulse is the major ecological driver for fish, providing feeding, breeding and migration opportunities, and profoundly affecting O2, CO2 and DOC regimes. Owing to climate change and other anthropogenic pressures such as deforestation, pollution and governmental mismanagement, Amazonia is now in crisis. The environment is becoming hotter and drier, and more intense and frequent flood pulses are now occurring, with greater variation between high and low water levels. Current projections are that Amazon waters of the near future will be even hotter, more acidic, darker (i.e. more DOC, more suspended particles), higher in ions, higher in CO2 and lower in O2, with many synergistic effects. We review current physiological information on Amazon fish, focusing on temperature tolerance and ionoregulatory strategies for dealing with acidic and ion-poor environments. We also discuss the influences of DOC and particles on gill function, the effects of high dissolved CO2 and low dissolved O2, with emphasis on water- versus air-breathing mechanisms, and strategies for pH compensation. We conclude that future elevations in water temperature will be the most critical factor, eliminating many species. Climate change will likely favour predominantly water-breathing species with low routine metabolic rates, low temperature sensitivity of routine metabolic rates, high anaerobic capacity, high hypoxia tolerance and high thermal tolerance.

Dissolved organic carbon response to hydrological drought characteristics: Based on long-term measurements of headwater streams

Influence of extreme hydrological events on water quality has been widely concerned. For instance, droughts can inhibit dissolved organic carbon (DOC) exports or imports. However, the response relationship of DOC to hydrological drought characteristics (i.e., duration and severity) requires more in-depth research. We propose an integrated framework for constructing, validating, and applying the response relationship model, and investigate the capability of response model to simulate DOC based on hydrological drought characteristics. Three headwater basins (HP3a, HP4, and HP6), with different drainage areas (9.28-122.80 ha) and long-term (>40 year) observed DOC concentration and hydrometeorological data, in Harp Lake catchment, south-central Ontario, southeastern Canada, are used to demonstrate the proposed framework. Run theory and variable drought thresholds (VDTs) are used to identify hydrological drought characteristics, and DOC during hydrological drought is extracted. Based on the extracted hydrological drought characteristics and DOC for one basin (i.e., HP3a), the response relationship model is constructed and validated, and then applied to other two basins (i.e., HP4 and HP6). Three evaluation indicators: coefficient of determination (R²), root-mean-square-error (RMSE), and mean absolute percentage error (MAPE), are served to test the goodness-of-fit performance of the response relationship model. The results show that (i) annual DOC concentration showed a significant (a = 0.01) increasing trend during 1978-2018 in the study basin. (ii) During the hydrological drought, the variation of temperature affected DOC variation indirectly through direct influence on SO₄ variation. (iii) The response sensitivity of DOC to hydrologic process with different timescales is varying within a year, namely, there is a larger response sensitivity from March to May than in other months. (iv) DOC during the hydrological drought has a close and regular linear relationship with hydrological drought characteristics, i.e., with the increase of drought duration and severity, DOC concentration also increases. The relationship with drought duration is better than that of severity (R² = 0.92 vs 0.35). (v) The response relationship model (autoregressive integrated moving average) can simulate DOC in hydrological drought (R² ≥ 0.87, RMSE ≤ 0.86, MAPE ≤ 13.69%) at HP3a, and also has good applications at HP4 and HP6 basins. These results provide an improved understanding of DOC-drought relationship, and may support policy makers that look for increased resilience of aquatic ecological security to droughts.

The impact of bioretention column internal water storage underdrain height on denitrification under continuous and transient flow

Internal water storage (IWS), a below-grade saturated layer, is a bioretention design component created by adjusting the underdrain outlet elevation. Anaerobic conditions and the presence of a carbon source in IWS facilitates denitrification. Yet it remains unclear how underdrain height within the IWS impacts nitrate (NO3-) removal. This study applied synthetic stormwater with NO3- to three laboratory columns with underdrains located at the bottom, middle, or top of a 32 cm thick gravel-woodchip IWS. Under steady state conditions, underdrain nitrogen removal demonstrated a positive linear relationship with increasing hydraulic residence time (HRT). For a 1 cm/h hydraulic loading rate (HLR), nitrogen removal efficiency increased from 52 to 99% as underdrain height moved from the top to the bottom. Despite identical IWS thickness across columns, immobilize zones below the middle and top underdrains limited the steady state nitrogen removal. Dual isotopes in NO3- also indicated denitrification occurred in mobile zones and showed little or no denitrification in immobile zones due to limited mass transport. Transient flow conditions were applied, to mimic storms, followed by dry conditions. Lower effluent nitrogen concentrations and mass fluxes were observed from the bottom underdrain across the range of HLRs tested (1 to 5 cm/h) but performance of all three underdrains converged after the application of one pore volume. The top underdrain enhanced mixing between new incoming low-DOC stormwater and old IWS water with high-DOC which minimized effluent DOC concentrations. NO3- isotope enrichment factors indicated denitrification during transient flow for all three underdrain heights and enrichment increased for the 5 cm/h HLR. For sites with narrow IWS geometries (width to depth ratio < 1), optimal underdrain height is likely located between the bottom and top of the IWS to promote mixing with old IWS water high in DOC and sustain denitrification during storms.

The role of terrestrial productivity and hydrology in regulating aquatic dissolved organic carbon concentrations in boreal catchments

The past decades have witnessed an increase in dissolved organic carbon (DOC) concentrations in the catchments of the Northern Hemisphere. Increasing terrestrial productivity and changing hydrology may be reasons for the increases in DOC concentration. The aim of this study is to investigate the impacts of increased terrestrial productivity and changed hydrology following climate change on DOC concentrations. We tested and quantified the effects of gross primary production (GPP), ecosystem respiration (RE) and discharge on DOC concentrations in boreal catchments over 3 years. As catchment characteristics can regulate the extent of rising DOC concentrations caused by the regional or global environmental changes, we selected four catchments with different sizes (small, medium and large) and landscapes (forest, mire and forest-mire mixed). We applied multiple models: Wavelet coherence analysis detected the delay-effects of terrestrial productivity and discharge on aquatic DOC variations of boreal catchments; thereafter, the distributed-lag linear models quantified the contributions of each factor on DOC variations. Our results showed that the combined impacts of terrestrial productivity and discharge explained 62% of aquatic DOC variations on average across all sites, whereas discharge, gross primary production (GPP) and RE accounted for 26%, 22% and 3%, respectively. The impact of GPP and discharge on DOC changes was directly related to catchment size: GPP dominated DOC fluctuations in small catchments (<1 km² ), whereas discharge controlled DOC variations in big catchments (>1 km² ). The direction of the relation between GPP and discharge on DOC varied. Increasing RE always made a positive contribution to DOC concentration. This study reveals that climate change-induced terrestrial greening and shifting hydrology change the DOC export from terrestrial to aquatic ecosystems. The work improves our mechanistic understanding of surface water DOC regulation in boreal catchments and confirms the importance of DOC fluxes in regulating ecosystem C budgets.

A comparison of adsorption of organic micropollutants onto activated carbon following chemically enhanced primary treatment with microsieving, direct membrane filtration and tertiary treatment of municipal wastewater

The adsorption of organic micropollutants onto powdered activated carbon (PAC) was investigated in laboratory scale based on samples from four wastewater process streams (matrices); three from a pilot-scale plant with different degrees of physicochemical treatment of municipal wastewater and one from a full-scale activated sludge plant with post-precipitation. The pilot-scale treatment consisted of chemically enhanced primary treatment with microsieving followed by direct membrane filtration as microfiltration or ultrafiltration. The results showed highest adsorption of micropollutants in the tertiary (biologically and chemically) treated wastewater and lowest adsorption in the microsieve filtrate. Adsorption of micropollutants in the direct membrane microfiltration (200 nm) permeate was generally similar to that in the direct membrane ultrafiltration (3 nm) permeate. The higher adsorption of micropollutants in the tertiary treated wastewater could be related to a lower concentration of dissolved organic carbon (DOC) and lower affinity of DOC for PAC at low dosage (<15 mg PAC/L) in this matrix. At a PAC dose of 10 mg/L, sulfamethoxazole was removed by 33% in the tertiary treated wastewater and 7% in the direct membrane microfiltration permeate. In addition to the PAC experiments, a pilot scale sand filter and a proceeding GAC filter was operated on tertiary treated wastewater from the full-scale treatment plant. Similar removal trends in the PAC and GAC experiments were observed when studying a weighted average micropollutant removal in the GAC filter and a similar dose of activated carbon for both PAC and GAC. Positively charged micropollutants were removed to a higher extent than negatively charged ones by both PAC and GAC.

Whole-genome sequencing illuminates multifaceted targets of selection to humic substances in Eurasian perch

Extreme environments are inhospitable to the majority of species, but some organisms are able to survive in such hostile conditions due to evolutionary adaptations. For example, modern bony fishes have colonized various aquatic environments, including perpetually dark, hypoxic, hypersaline and toxic habitats. Eurasian perch (Perca fluviatilis) is among the few fish species of northern latitudes that is able to live in very acidic humic lakes. Such lakes represent almost "nocturnal" environments; they contain high levels of dissolved organic matter, which in addition to creating a challenging visual environment, also affects a large number of other habitat parameters and biotic interactions. To reveal the genomic targets of humic-associated selection, we performed whole-genome sequencing of perch originating from 16 humic and 16 clear-water lakes in northern Europe. We identified over 800,000 SNPs, of which >10,000 were identified as potential candidates under selection (associated with >3,000 genes) using multiple outlier approaches. Our findings suggest that adaptation to the humic environment may involve hundreds of regions scattered across the genome. Putative signals of adaptation were detected in genes and gene families with diverse functions, including organism development and ion transportation. The observed excess of variants under selection in regulatory regions highlights the importance of adaptive evolution via regulatory elements, rather than via protein sequence modification. Our study demonstrates the power of whole-genome analysis to illuminate multifaceted nature of humic adaptation and provides the foundation for further investigation of causal mutations underlying phenotypic traits of ecological and evolutionary importance.

Plastic leachates lead to long-term toxicity in fungi and promote biodegradation of heterocyclic dye

The hazardous effects of plastic and plastic leachates on organisms, even bacteria, have attracted widespread attention, but only a limited effort has been devoted to explore the response of fungi to plastic leachate induced by light irradiation. Here, we performed plastic leaching experiments to obtain leachates from polyethylene (PE), polyethylene terephthalate (PET) and polypropylene (PP), and optical properties of plastic leachates were analysed to determine the influence of light conditions and plastic materials on that. The effects of plastic leachates on the production of fungal enzyme and the biodegradation of heterocyclic dye by fungi were evaluated. Results indicated that the UV light greatly enhanced the release of leachates from the three plastics. Both plastic polymers and light irradiation affected the plastic-derived dissolved organic carbon (DOC) and their aromaticity, but the molecular weight of plastic leachates showed no dependency on light irradiation types, and PE was the easiest to photo age and leached more DOC. Plastic leachates had no dose-effect on the production of extracellular enzymes by fungi. PE leachates showed long-term toxicities to fungi, and no manganese peroxidase activities were detected after a 42-day incubation, while that of controls were up to 73.64 ± 8.81 U/L. However, the PE and PP leachates greatly promoted methylene blue degradation by the fungi, but PET leachates relieved the decolouration of methylene blue, probably because of the benzene ring structure in the PET monomer. Fusarium oxysporum had a stronger degradation ability than Phanerochaete chrysosporium. Our results indicate that plastic leachates can influence the production and secretion of fungi ligninolytic extracellular enzymes, and regulate the fungal degradation of heterocyclic dye.

Management impacts on the dissolved organic carbon release from deadwood, ground vegetation and the forest floor in a temperate Oak woodland

The forest floor is often considered the most important source of dissolved organic carbon (DOC) in forest soils, yet little is known about the relative contribution from different forest floor layers, understorey vegetation and deadwood. Here, we determine the carbon stocks and potential DOC production from forest materials: deadwood, ground vegetation, leaf litter, the fermentation layer and top mineral soil (Ah horizon), and further assess the impact of management. Our research is based on long-term monitoring plots in a temperate deciduous woodland, with one set of plots actively managed by thinning, understorey scrub and deadwood removal, and another set that were not managed in 23 years. We examined long-term data and a spatial survey of forest materials to estimate the relative carbon stocks and concentrations and fluxes of DOC released from these different pools. Long-term soil water monitoring revealed a large difference in median DOC concentrations between the unmanaged (43.8 mg L^-1) and managed (18.4 mg L^-1) sets of plots at 10 cm depth over six years, with the median DOC concentration over twice as high in the unmanaged plots. In our spatial survey, a significantly larger cumulative flux of DOC was released from the unmanaged than the managed site, with 295.5 and 230.3 g m^-2, respectively. Whilst deadwood and leaf litter released the greatest amount of DOC per unit mass, when volume of the material was considered, leaf litter contributed most to DOC flux, with deadwood contributing least. Likewise, there were significant differences in the carbon stocks held by different forest materials that were dependent on site. Vegetation and the fermentation layer held more carbon in the managed site than unmanaged, whilst the opposite occurred in deadwood and the Ah horizon. These findings indicate that management affects the allocation of carbon stored and DOC released between different forest materials.

Microbial Communities Influence Soil Dissolved Organic Carbon Concentration by Altering Metabolite Composition

Rapid microbial growth in the early phase of plant litter decomposition is viewed as an important component of soil organic matter (SOM) formation. However, the microbial taxa and chemical substrates that correlate with carbon storage are not well resolved. The complexity of microbial communities and diverse substrate chemistries that occur in natural soils make it difficult to identify links between community membership and decomposition processes in the soil environment. To identify potential relationships between microbes, soil organic matter, and their impact on carbon storage, we used sand microcosms to control for external environmental factors such as changes in temperature and moisture as well as the variability in available carbon that exist in soil cores. Using Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS) on microcosm samples from early phase litter decomposition, we found that protein- and tannin-like compounds exhibited the strongest correlation to dissolved organic carbon (DOC) concentration. Proteins correlated positively with DOC concentration, while tannins correlated negatively with DOC. Through random forest, neural network, and indicator species analyses, we identified 42 bacterial and 9 fungal taxa associated with DOC concentration. The majority of bacterial taxa (26 out of 42 taxa) belonged to the phylum Proteobacteria while all fungal taxa belonged to the phylum Ascomycota. Additionally, we identified significant connections between microorganisms and protein-like compounds and found that most taxa (12/14) correlated negatively with proteins indicating that microbial consumption of proteins is likely a significant driver of DOC concentration. This research links DOC concentration with microbial production and/or decomposition of specific metabolites to improve our understanding of microbial metabolism and carbon persistence.

Synergistic Effects of a CeO2/SmMn2O5-H Diesel Oxidation Catalyst Induced by Acid-Selective Dissolution Drive the Catalytic Oxidation Reaction

A diesel oxidation catalyst (DOC) is installed upstream of an exhaust after-treatment line to remove CO and hydrocarbons and generate NO₂. The catalyst should possess both good oxidation ability and thermal stability because it sits after the engine. We present a novel high-performance DOC with high steam resistance and thermal stability. A selective dissolution method is adopted to modify the surface physicochemical environment of CeO₂-SmMn₂O₅. The X-ray photoelectron spectroscopy, X-ray absorption spectroscopy, Raman, electron paramagnetic resonance, hydrogen temperature-programmed reduction, and temperature-programmed desorption results reveal that surface Sm cations are partially removed with the exposure of more Mn⁴⁺ and Ce³⁺ cations and the presence of active surface oxygen species. This mechanism benefits the oxygen transformation from Ce to Mn and promotes the Ce³⁺ + Mn⁴⁺ ↔ Ce⁴⁺ + Mn³⁺ redox cycle according to the in situ near-ambient pressure X-ray photoelectron spectroscopy and in situ diffuse reflectance infrared Fourier transformation spectroscopy results. Under laboratory-simulated diesel combustion conditions, the catalyst demonstrates excellent low-temperature oxidation catalytic activity (CO and C₃H₆ conversion: T₁₀₀ = 250 °C) compared to a Pt-based catalyst (CO and C₃H₆ conversion: T₁₀₀ = 310 °C) with a WHSV of 120,000 mL g^-1 h^-1. Specifically, NO conversion reaches 68% when the temperature is approximately 300 °C.