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Stankiewicz KH, Guiglielmoni N, Kitchen SA, Flot JF, Barott KL, Davies SW, Finnerty JR, Grace SP, Kaufman LS, Putnam HM, Rotjan RD, Sharp KH, Peters EC, Baums IB. Genomic comparison of the temperate coral Astrangia poculata with tropical corals yields insights into winter quiescence, innate immunity, and sexual reproduction. G3 (BETHESDA, MD.) 2025; 15:jkaf033. [PMID: 39964876 PMCID: PMC12005167 DOI: 10.1093/g3journal/jkaf033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2024] [Accepted: 02/02/2025] [Indexed: 02/20/2025]
Abstract
Facultatively symbiotic corals provide important experimental models to explore the establishment, maintenance, and breakdown of the mutualism between corals and members of the algal family Symbiodiniaceae. Here, we report the de novo chromosome-scale genome assembly and annotation of the facultatively symbiotic, temperate coral Astrangia poculata. Though widespread segmental/tandem duplications of genomic regions were detected, we did not find strong evidence of a whole-genome duplication event. Comparison of the gene arrangement between As. poculata and the tropical coral Acropora millepora revealed considerable conserved colinearity despite ∼415 million years of divergence. Gene families related to sperm hyperactivation and innate immunity, including lectins, were found to contain more genes in Ac. millepora relative to As. poculata. Sperm hyperactivation in Ac. millepora is expected given the extreme requirements of gamete competition during mass spawning events in tropical corals, while lectins are important in the establishment of coral-algal symbiosis. By contrast, gene families involved in sleep promotion, feeding suppression, and circadian sleep/wake cycle processes were expanded in As. poculata. These expanded gene families may play a role in As. poculata's ability to enter a dormancy-like state (winter quiescence) to survive freezing temperatures at the northern edges of the species' range.
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Affiliation(s)
- Kathryn H Stankiewicz
- Department of Biology, The Pennsylvania State University, University Park, PA 16802, USA
- Institute for Systems Biology, Seattle, WA 98109, USA
| | - Nadège Guiglielmoni
- Department of Marine Biology, Université libre de Bruxelles (ULB), Brussels 1050, Belgium
| | - Sheila A Kitchen
- Department of Biology, The Pennsylvania State University, University Park, PA 16802, USA
- Department of Marine Biology, Texas A&M University at Galveston, Galveston, TX 77554, USA
| | - Jean-François Flot
- Department of Marine Biology, Université libre de Bruxelles (ULB), Brussels 1050, Belgium
- Interuniversity Institute of Bioinformatics in Brussels—(IB), Brussels 1050, Belgium
| | - Katie L Barott
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104, USA
| | - Sarah W Davies
- Department of Biology, Boston University, Boston, MA 02215, USA
| | - John R Finnerty
- Department of Biology, Boston University, Boston, MA 02215, USA
| | - Sean P Grace
- Department of Biology & Werth Center for Coastal and Marine Studies, Southern Connecticut State University, New Haven, CT 06515, USA
| | | | - Hollie M Putnam
- Department of Biological Sciences, University of Rhode Island, Kingston, RI 02881, USA
| | - Randi D Rotjan
- Department of Biology, Boston University, Boston, MA 02215, USA
| | - Koty H Sharp
- Department of Biology, Marine Biology, and Environmental Science, Roger Williams University, Bristol, RI 02809, USA
| | - Esther C Peters
- Department of Environmental Science and Policy, George Mason University, Fairfax, VA 22030, USA
| | - Iliana B Baums
- Department of Biology, The Pennsylvania State University, University Park, PA 16802, USA
- Helmholtz Institute for Functional Marine Biodiversity at the University of Oldenburg (HIFMB), Carl von Ossietzky Universität Oldenburg, Oldenburg 26129, Germany
- Alfred Wegener Institute, Helmholtz-Centre for Polar and Marine Research, Bremerhaven 27570, Germany
- Institute for Chemistry and Biology of the Marine Environment (ICBM), School of Mathematics and Science, Carl von Ossietzky Universität Oldenburg, Oldenburg 26129, Germany
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Sani T, Prada F, Radi G, Caroselli E, Falini G, Dubinsky Z, Goffredo S. Ocean warming and acidification detrimentally affect coral tissue regeneration at a Mediterranean CO 2 vent. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 906:167789. [PMID: 37838040 DOI: 10.1016/j.scitotenv.2023.167789] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/10/2023] [Revised: 09/30/2023] [Accepted: 10/10/2023] [Indexed: 10/16/2023]
Abstract
Among the main phenomena that are causing significant changes in ocean waters are warming and acidification, largely due to anthropogenic activities. Growing evidence suggests that climate change is having more substantial and rapid effects on marine communities than on terrestrial ones, triggering several physiological responses in these organisms, including in corals. Here we investigated, for first time in the field, the combined effect of increasing seawater acidification and warming on tissue regeneration rate of three Mediterranean scleractinian coral species characterized by different trophic strategies and growth modes. Balanophyllia europaea (solitary, zooxanthellate), Leptopsammia pruvoti (solitary, non-zooxanthellate) and Astroides calycularis (colonial, non-zooxanthellate) specimens were transplanted, during a cold, intermediate, and warm period, along a natural pH gradient generated by an underwater volcanic crater at Panarea Island (Mediterranean Sea, Italy), characterized by continuous and localized CO2 emissions at ambient temperature. Our results show a decrease in regenerative capacity, especially in the zooxanthellate species, with increasing seawater temperature and acidification, with demonstrated species-specific differences. This finding suggests that increasing seawater temperature and acidification could have a compounding effect on coral regeneration following injury, potentially hindering the capacity of corals to recover following physical disturbance under predicted climate change.
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Affiliation(s)
- Teresa Sani
- Marine Science Group, Department of Biological, Geological and Environmental Sciences, University of Bologna, Via F. Selmi 3, 40126 Bologna, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, Viale Adriatico 1/N, 61032 Fano, Italy
| | - Fiorella Prada
- Marine Science Group, Department of Biological, Geological and Environmental Sciences, University of Bologna, Via F. Selmi 3, 40126 Bologna, Italy; Department of Marine and Coastal Sciences, Rutgers, The State University of New Jersey, New Brunswick, NJ 08901, USA
| | - Giulia Radi
- Marine Science Group, Department of Biological, Geological and Environmental Sciences, University of Bologna, Via F. Selmi 3, 40126 Bologna, Italy
| | - Erik Caroselli
- Marine Science Group, Department of Biological, Geological and Environmental Sciences, University of Bologna, Via F. Selmi 3, 40126 Bologna, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, Viale Adriatico 1/N, 61032 Fano, Italy
| | - Giuseppe Falini
- Department of Chemistry "Giacomo Ciamician", University of Bologna, 40126 Bologna, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, Viale Adriatico 1/N, 61032 Fano, Italy
| | - Zvy Dubinsky
- The Mina and Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat-Gan 52900, Israel
| | - Stefano Goffredo
- Marine Science Group, Department of Biological, Geological and Environmental Sciences, University of Bologna, Via F. Selmi 3, 40126 Bologna, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, Viale Adriatico 1/N, 61032 Fano, Italy.
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3
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Synergistic Effect of Elevated Temperature and Light Stresses on Physiology of Pocillopora acuta from Different Environments. JOURNAL OF MARINE SCIENCE AND ENGINEERING 2022. [DOI: 10.3390/jmse10060790] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Increasing levels of greenhouse gases lead to ocean warming, which affects a range of marine organisms. Corals live in a narrow temperature range and become stressed when the temperatures change. Bleaching occurs when the temperature exceeds the coral’s threshold, and can be severe when this is combined with other stressors such as light. In order to understand how temperature and light affect corals in their physiological responses and photosynthetic performance, Pocillopora acuta from Maiton Island (MT) and Panwa Cape (PW), representing different environments, were investigated. The results show that light and temperature had by regime different effects on Symbiodiniaceae photosynthesis and the coral growth rate. There was a synergistic effect of elevated temperature and light on photosynthesis, as observed in the photochemical efficiency and pigment contents, suggesting photo-damage. A higher growth rate in Panwa corals was observed in control, and while elevated temperature reduced coral growth. Elevated temperature affected the Panwa coral less, suggesting that corals from this regime might be able to recover when the temperature returns to normal. This information is important for predicting the coral responses to elevated temperature especially in the summer, as regards the possibility of coral bleaching.
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Caroselli E, Frapiccini E, Franzellitti S, Palazzo Q, Prada F, Betti M, Goffredo S, Marini M. Accumulation of PAHs in the tissues and algal symbionts of a common Mediterranean coral: Skeletal storage relates to population age structure. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 743:140781. [PMID: 32673924 DOI: 10.1016/j.scitotenv.2020.140781] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2020] [Revised: 07/01/2020] [Accepted: 07/04/2020] [Indexed: 06/11/2023]
Abstract
Polycyclic aromatic hydrocarbons (PAHs) are widespread and harmful environmental pollutants that threaten marine ecosystems. Assessing their level and source is crucial to estimate the potential risks for marine organisms, as PAHs represent an additional threat to organism resilience under ongoing climatic change. Here we applied the QuEChERS extraction method to quantify four PAHs (i.e. acenaphthene, fluorene, fluoranthene, and pyrene) in three biological compartments (i.e. skeleton, tissue, and zooxanthellae symbiotic algae) of adult and old specimens of a scleractinian coral species (Balanophyllia europaea) that is widespread throughout the Mediterranean Sea. A higher concentration of all four investigated PAHs was observed in the zooxanthellae, followed by the coral tissue, with lowest concentration in the skeleton, consistently with previous studies on tropical species. In all the three biological compartments, the concentration of low molecular weight PAHs was higher with respect to high-molecular weight PAHs, in agreement with their bioaccumulation capabilities. PAH concentration was unrelated to skeletal age. Observed PAHs were of petrogenic origin, reflecting the pollution sources of the sampling area. By coupling PAH data with population age structure data measured in the field, the amount of PAHs stored in the long term (i.e. up to 20 years) in coral skeletons was quantified and resulted in 53.6 ng m-2 of acenaphthene, 69.4 ng m-2 of fluorene, 2.7 ng m-2 of fluoranthene, and 11.7 ng m-2 of pyrene. This estimate provides the basis for further assessments of long-term sequestration of PAHs from the marine environment in the whole Mediterranean, given the widespread distribution of the investigated coral species.
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Affiliation(s)
- Erik Caroselli
- Marine Science Group, Department of Biological, Geological and Environmental Sciences, University of Bologna, via Selmi 3, 40126 Bologna, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, Viale Adriatico 1/N, 61032 Fano, Italy.
| | - Emanuela Frapiccini
- Institute of Biological Resources and Marine Biotechnology (IRBIM), National Research Council (CNR), Largo Fiera della Pesca 2, 60125 Ancona, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, Viale Adriatico 1/N, 61032 Fano, Italy.
| | - Silvia Franzellitti
- Animal and Environmental Physiology Laboratory, Department of Biological, Geological and Environmental Sciences, University of Bologna, via S. Alberto 163, 48123 Ravenna, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, Viale Adriatico 1/N, 61032 Fano, Italy.
| | - Quinzia Palazzo
- Department of Chemistry "Giacomo Ciamician", University of Bologna, Via Selmi 2, 40126 Bologna, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, Viale Adriatico 1/N, 61032 Fano, Italy.
| | - Fiorella Prada
- Marine Science Group, Department of Biological, Geological and Environmental Sciences, University of Bologna, via Selmi 3, 40126 Bologna, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, Viale Adriatico 1/N, 61032 Fano, Italy.
| | - Mattia Betti
- Institute of Biological Resources and Marine Biotechnology (IRBIM), National Research Council (CNR), Largo Fiera della Pesca 2, 60125 Ancona, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, Viale Adriatico 1/N, 61032 Fano, Italy.
| | - Stefano Goffredo
- Marine Science Group, Department of Biological, Geological and Environmental Sciences, University of Bologna, via Selmi 3, 40126 Bologna, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, Viale Adriatico 1/N, 61032 Fano, Italy.
| | - Mauro Marini
- Institute of Biological Resources and Marine Biotechnology (IRBIM), National Research Council (CNR), Largo Fiera della Pesca 2, 60125 Ancona, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, Viale Adriatico 1/N, 61032 Fano, Italy.
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5
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Mason RAB, Wall CB, Cunning R, Dove S, Gates RD. High light alongside elevated P CO2 alleviates thermal depression of photosynthesis in a hard coral ( Pocillopora acuta). ACTA ACUST UNITED AC 2020; 223:223/20/jeb223198. [PMID: 33087470 DOI: 10.1242/jeb.223198] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2020] [Accepted: 08/12/2020] [Indexed: 11/20/2022]
Abstract
The absorbtion of human-emitted CO2 by the oceans (elevated P CO2 ) is projected to alter the physiological performance of coral reef organisms by perturbing seawater chemistry (i.e. ocean acidification). Simultaneously, greenhouse gas emissions are driving ocean warming and changes in irradiance (through turbidity and cloud cover), which have the potential to influence the effects of ocean acidification on coral reefs. Here, we explored whether physiological impacts of elevated P CO2 on a coral-algal symbiosis (Pocillopora acuta-Symbiodiniaceae) are mediated by light and/or temperature levels. In a 39 day experiment, elevated P CO2 (962 versus 431 µatm P CO2 ) had an interactive effect with midday light availability (400 versus 800 µmol photons m-2 s-1) and temperature (25 versus 29°C) on areal gross and net photosynthesis, for which a decline at 29°C was ameliorated under simultaneous high-P CO2 and high-light conditions. Light-enhanced dark respiration increased under elevated P CO2 and/or elevated temperature. Symbiont to host cell ratio and chlorophyll a per symbiont increased at elevated temperature, whilst symbiont areal density decreased. The ability of moderately strong light in the presence of elevated P CO2 to alleviate the temperature-induced decrease in photosynthesis suggests that higher substrate availability facilitates a greater ability for photochemical quenching, partially offsetting the impacts of high temperature on the photosynthetic apparatus. Future environmental changes that result in moderate increases in light levels could therefore assist the P. acuta holobiont to cope with the 'one-two punch' of rising temperatures in the presence of an acidifying ocean.
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Affiliation(s)
- Robert A B Mason
- Hawai'i Institute of Marine Biology, School of Ocean and Earth Science and Technology, University of Hawai'i at Mānoa, PO Box 1346, Kāne'ohe, HI 96744, USA .,ARC Centre of Excellence for Coral Reef Studies, and Centre for Marine Science, School of Biological Sciences, University of Queensland, St Lucia, QLD 4072, Australia
| | - Christopher B Wall
- Hawai'i Institute of Marine Biology, School of Ocean and Earth Science and Technology, University of Hawai'i at Mānoa, PO Box 1346, Kāne'ohe, HI 96744, USA.,Pacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA
| | - Ross Cunning
- Hawai'i Institute of Marine Biology, School of Ocean and Earth Science and Technology, University of Hawai'i at Mānoa, PO Box 1346, Kāne'ohe, HI 96744, USA.,Daniel P. Haerther Center for Conservation and Research, John G. Shedd Aquarium, Chicago, IL 60605, USA
| | - Sophie Dove
- ARC Centre of Excellence for Coral Reef Studies, and Centre for Marine Science, School of Biological Sciences, University of Queensland, St Lucia, QLD 4072, Australia
| | - Ruth D Gates
- Hawai'i Institute of Marine Biology, School of Ocean and Earth Science and Technology, University of Hawai'i at Mānoa, PO Box 1346, Kāne'ohe, HI 96744, USA
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Franzellitti S, Airi V, Calbucci D, Caroselli E, Prada F, Voolstra CR, Mass T, Falini G, Fabbri E, Goffredo S. Transcriptional response of the heat shock gene hsp70 aligns with differences in stress susceptibility of shallow-water corals from the Mediterranean Sea. MARINE ENVIRONMENTAL RESEARCH 2018; 140:444-454. [PMID: 30055833 DOI: 10.1016/j.marenvres.2018.07.006] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2018] [Revised: 07/09/2018] [Accepted: 07/13/2018] [Indexed: 06/08/2023]
Abstract
Shallow-water corals of the Mediterranean Sea are facing a dramatic increase in water temperature due to climate change, predicted to increase the frequency of bleaching and mass mortality events. However, supposedly not all corals are affected equally, as they show differences in stress susceptibility, as suggested by physiological outputs of corals along temperature gradients and under controlled conditions in terms of reproduction, demography, growth, calcification, and photosynthetic efficiency. In this study, gene expression and induction of a 70-kDa heat shock protein (HSP70) was analyzed in five common shallow-water hard corals in the Mediterranean Sea, namely Astroides calycularis, Balanophyllia europaea, Caryophyllia inornata, Cladocora caespitosa, and Leptopsammia pruvoti. The main aim was to assess the contribution of this evolutionary conserved cytoprotective mechanism to the physiological plasticity of these species that possess different growth modes (solitary vs colonial) and trophic strategies (zooxanthellate vs azooxanthellate). Using quantitative real-time PCR, in situ hsp70 baseline levels and expression profiles after a heat-shock exposure were assessed. Levels of hsp70 and heat stress induction were higher in zooxanthellate than in azooxanthellate species, and different heat stress transcriptional profiles were observed between colonial and solitary zooxanthellate corals. On the whole, the hsp70 transcriptional response to heat stress aligns with stress susceptibility of the species and suggests a contribution of trophic strategy and morphology in shaping coral resilience to stress. Understanding these molecular processes may contribute to assess the potential effects and relative resilience of Mediterranean corals under climate change.
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Affiliation(s)
- Silvia Franzellitti
- Animal and Environmental Physiology Laboratory, Department of Biological, Geological and Environmental Sciences, University of Bologna, via S. Alberto 163, I-48123, Ravenna, Italy.
| | - Valentina Airi
- Marine Science Group, Department of Biological, Geological and Environmental Sciences, University of Bologna, Via F. Selmi 3, I-40126, Bologna, Italy
| | - Diana Calbucci
- Animal and Environmental Physiology Laboratory, Department of Biological, Geological and Environmental Sciences, University of Bologna, via S. Alberto 163, I-48123, Ravenna, Italy
| | - Erik Caroselli
- Marine Science Group, Department of Biological, Geological and Environmental Sciences, University of Bologna, Via F. Selmi 3, I-40126, Bologna, Italy
| | - Fiorella Prada
- Marine Science Group, Department of Biological, Geological and Environmental Sciences, University of Bologna, Via F. Selmi 3, I-40126, Bologna, Italy
| | - Christian R Voolstra
- Red Sea Research Center, Division of Biological and Environmental Science and Engineering (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Saudi Arabia
| | - Tali Mass
- Department of Marine Biology, The Leon H. Charney School of Marine Sciences, University of Haifa, Multi Purpose Boulevard, Mt. Carmel, Haifa, 3498838, Israel
| | - Giuseppe Falini
- Department of Chemistry "Giacomo Ciamician", University of Bologna, via F. Selmi 2, I-40126, Bologna, Italy
| | - Elena Fabbri
- Animal and Environmental Physiology Laboratory, Department of Biological, Geological and Environmental Sciences, University of Bologna, via S. Alberto 163, I-48123, Ravenna, Italy
| | - Stefano Goffredo
- Marine Science Group, Department of Biological, Geological and Environmental Sciences, University of Bologna, Via F. Selmi 3, I-40126, Bologna, Italy
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7
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Grace S. Winter Quiescence, Growth Rate, and the Release from Competition in the Temperate Scleractinian Coral Astrangia poculata (Ellis & Solander 1786). Northeast Nat (Steuben) 2017. [DOI: 10.1656/045.024.s715] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Affiliation(s)
- Sean Grace
- Department of Biology, Southern Connecticut State University, New Haven, CT 06515;
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