Biosurfactants production by marine yeasts isolated from zoanthids and characterization of an emulsifier produced by Yarrowia lipolytica LMS 24B

The present study investigates the potential for biosurfactant production of 19 marine yeast species obtained from zoanthids. Using the emulsification index test to screen the samples produced by the marine yeasts, we verified that five isolates exhibited an emulsification index ≥50%. Additional tests were performed on such isolates, including oil displacement, drop collapse, Parafilm M assay, and surface tension measurement. The tolerance of produced biosurfactants for environmental conditions was also analyzed, especially considering the media's temperature, pH, and salinity. Moreover, the surfactant's ability to emulsify different hydrocarbon sources and to metabolize kerosene as the sole carbon source was evaluated in vitro. Our results demonstrate that yeast biosurfactants can emulsify hydrocarbon sources under different physicochemical conditions and metabolize kerosene as a carbon source. Considering the Yarrowia lipolytica LMS 24B as the yeast model for biosurfactant production from the cell's wall biomass, emulsification indexes of 61.2% were obtained, even at a high temperature of 120 °C. Furthermore, the Fourier-transform middle infrared spectroscopy (FTIR) analysis of the biosurfactant's chemical composition revealed the presence of distinct functional groups assigned to a glycoprotein complex. Considering the status of developing new bioproducts and bioprocesses nowadays, our findings bring a new perspective to biosurfactant production by marine yeasts, especially Y. lipolytica LMS 24B. In particular, the presented results validate the relevance of marine environments as valuable sources of genetic resources, i.e., yeast strains capable of metabolizing and emulsifying petroleum derivatives.

Seasonally varying biogeochemical regime around the coral habitats off central west coast of India

The Western Indian Continental Shelf (WICS) experiences upwelling during the Southwest Monsoon (SWM), leading to deoxygenation and acidification of subsurface waters. The region has patchy growth of corals, e.g. in the Grande Island and Angria Bank. Measurements made during the late SWM of 2022 reveal that the shelf waters around the Grande Island were subject to varying environmental conditions, viz. lower temperature (21.3-26.1°C), oxygen (0-4.9 mL L-1) and pHT (7.506-7.927). Complete anoxia was associated with sulphide build-up to a maximum of 5.9 μmol L-1 at 17 m depth. An additional episodic condition (high temperature, low oxygen and pH) also occurred associated presumably with a plankton bloom in April 2017. Hence, unlike the offshore coral site Angria Bank, waters around the Grande Island experiences extreme changes in physico-chemical conditions (e.g. Ωarg ∼1.2-1.8 during October 2022) seasonally as reported here. The biogeochemical conditions are however not as intense (Ωarg = 0.6) as observed along the eastern boundary upwelling system of the Pacific Ocean.

Adaptation of a risk-based framework for evaluating indirect effects of dredging on sensitive habitats near federal navigation channels: An application of the framework to coral reefs at Honolulu Harbor, Hawai'i

In major harbors and ports in the United States and its territories, the US Army Corps of Engineers maintains federal navigation channels in proximity to coral reefs (e.g., Honolulu Harbor, HI; Miami Harbor, FL; Apra Harbor, Guam) and other sensitive habitats. To effectively predict potential adverse impacts from dredging activities near these sensitive habitats, a holistic approach to improve understanding of the pressures on these habitats is needed to foster a more complete prediction of risk drivers. To achieve this, risk-based frameworks that account for the full range of natural and anthropogenic impacts need to be adapted and applied specifically for assessing and managing indirect dredging impacts on sensitive environments. In this article, we address this need by incorporating a drivers-pressures-stressors-condition-response (DPSCR4 ) conceptual framework to broaden a comprehensive conceptual model of the coupled human-ecological system. To help understand these complex interactions, DPSCR4 was applied to evaluate dredging and other unrelated environmental pressures (e.g., terrestrial runoff) in a proof-of-concept dredging project in Honolulu Harbor, Hawai'i, USA, with a focus on the indirect effects of dredge plumes. Particle tracking models and risk-based tools were used to evaluate sediment resuspended during a hypothetical mechanical dredging activity near sensitive coral habitats. Stoplight indicators were developed to predict indirect sediment plume impacts on coral and then compared to exposure modeling results. The strengths and limitations of the approach are presented and the incorporation of the risk framework into environmental management decisions is discussed. Integr Environ Assess Manag 2024;20:547-561. Published 2023. This article is a U.S. Government work and is in the public domain in the USA.

Characterizing transcriptomic responses to sediment stress across location and morphology in reef-building corals

Anthropogenic activities increase sediment suspended in the water column and deposition on reefs can be largely dependent on colony morphology. Massive and plating corals have a high capacity to trap sediments, and active removal mechanisms can be energetically costly. Branching corals trap less sediment but are more susceptible to light limitation caused by suspended sediment. Despite deleterious effects of sediments on corals, few studies have examined the molecular response of corals with different morphological characteristics to sediment stress. To address this knowledge gap, this study assessed the transcriptomic responses of branching and massive corals in Florida and Hawai'i to varying levels of sediment exposure. Gene expression analysis revealed a molecular responsiveness to sediments across species and sites. Differential Gene Expression followed by Gene Ontology (GO) enrichment analysis identified that branching corals had the largest transcriptomic response to sediments, in developmental processes and metabolism, while significantly enriched GO terms were highly variable between massive corals, despite similar morphologies. Comparison of DEGs within orthogroups revealed that while all corals had DEGs in response to sediment, there was not a concerted gene set response by morphology or location. These findings illuminate the species specificity and genetic basis underlying coral susceptibility to sediments.

Ocean warming and acidification detrimentally affect coral tissue regeneration at a Mediterranean CO2 vent

Among the main phenomena that are causing significant changes in ocean waters are warming and acidification, largely due to anthropogenic activities. Growing evidence suggests that climate change is having more substantial and rapid effects on marine communities than on terrestrial ones, triggering several physiological responses in these organisms, including in corals. Here we investigated, for first time in the field, the combined effect of increasing seawater acidification and warming on tissue regeneration rate of three Mediterranean scleractinian coral species characterized by different trophic strategies and growth modes. Balanophyllia europaea (solitary, zooxanthellate), Leptopsammia pruvoti (solitary, non-zooxanthellate) and Astroides calycularis (colonial, non-zooxanthellate) specimens were transplanted, during a cold, intermediate, and warm period, along a natural pH gradient generated by an underwater volcanic crater at Panarea Island (Mediterranean Sea, Italy), characterized by continuous and localized CO2 emissions at ambient temperature. Our results show a decrease in regenerative capacity, especially in the zooxanthellate species, with increasing seawater temperature and acidification, with demonstrated species-specific differences. This finding suggests that increasing seawater temperature and acidification could have a compounding effect on coral regeneration following injury, potentially hindering the capacity of corals to recover following physical disturbance under predicted climate change.

Do coral reefs act as sinks for microplastics?

Microplastic (MP) pollution has been detected in coral reefs, raising concerns regarding its global impact. Although they cover a small portion (<1%) of the total area of the world's oceans, coral reefs are geological and biological structures that trap MPs and disproportionately enhance their accumulation. In this review, we attempted to understand how coral reefs act as short- and long-term sinks for MPs. We describe five characteristics that lead to the enrichment of microplastics in coral reefs: 1) adhesion on reef-building corals at distinct depths; 2) ingestion by reef organisms (e.g., suspension feeders, such as sponges, ascidians, and corals), bioconcentration, and formation of short-term (i.e., years to decades) biological sinks for MPs; 3) formation of long-term (i.e., centuries) MP sinks in coral skeletons and unconsolidated subsurface sediments; 4) reduction of sediment resuspension and seafloor turbulent kinetic energy by complex marine forest architecture that reduces bottom shear stress, facilitates the retention, and deposition of small (<0.5 mm) and high-density floating MPs; and 5) diagenesis of Anthropocene sedimentary rocks containing MPs. We estimate that reef processes may remove more than 10% of floating MPs in shallow tropical waters yearly. Statistical results show that microplastic abundance for reef-building corals are higher than values found in reef sediments and especially in seawater. Moreover, pellets, films, foams and mainly fragments and fibers have been found. These field-based data support our hypothesis of sinks in the reef sediments and organisms. We highlight the role of these seascapes in the interception of MPs as traps and sinks in reef sediments, biota, and carbonate frameworks. As coral reefs are prone to MP accumulation and can become pollution hotspots, global initiatives are necessary to conserve these rich ecosystems and prevent rapidly increasing plastic pollution.

Pocillopora damicornis-associated macroinvertebrate responses to spatial gradients in the southern Mexican Pacific

We explicitly tested for spatial changes in Pocillopora damicornis-associated invertebrates across several spatial scales in the southern Mexican Pacific. Sorting of invertebrates from 40 coral heads along 882 km of the coast yielded 325 taxa, 283% more than any other Pocillopora spp. coral host study to date, but estimators signals that richness might be 17-39% larger than the current number. Permutation, ordination, and regression analysis indicate that the composition and abundance of invertebrates vary in response to the spatial distance among coral heads: high similarity and variation occur among coral heads within localities (<500 m), probably related to faunal homogenization, but progressively modest reduction in similarity and variation as spatial distance increases suggesting a weak role for environmental sorting across southern Mexican Pacific coral reefs. Future studies should explicitly explore spatial, environmental, and historical biogeography processes that regulate and maintain community structure and biodiversity on eastern Pacific reefs.

Contamination of microplastics in tropical coral reef ecosystems of Sri Lanka

Microplastics (MPs) in different marine compartments are a global concern. This study investigated the abundance, distribution, and characteristics of microplastics from ten coral reef ecosystems in Sri Lanka, a non-quantified threat for some context. Microplastics were isolated and quantified in terms of abundance, shape, size, color, and polymer type with average abundances 546.7 ± 170.3 items kg-1, 9.8 ± 7.6 items m-3, and 46.3 ± 29.7 items kg-1 in corals, water, and sediments respectively. The most dominant microplastic type was blue, LDPE fibres. Acropora exhibited the highest amount. The significant differences in average microplastic abundances among corals suggest that they are capable of enriching microplastics depending on species-specific characteristics. Similar microplastic characteristics in corals and reef environment indicate that corals may have enriched microplastics from surface water and surface sediments. Microplastics being ubiquitous in selected reefs highlights the importance of coral reefs as a long-term microplastic sink in the ocean, contributing to the missing plastic phenomena.

Organic ultraviolet filter mixture promotes bleaching of reef corals upon the threat of elevated seawater temperature

Global reef degradation is a critical environmental health issue that has triggered intensive research on ocean warming, but the implications of emerging contaminants in coral habitats are largely overlooked. Laboratory experiments assessing organic ultraviolet (UV) filter exposure have shown that these chemicals negatively affect coral health; their ubiquitous occurrence in association with ocean warming may pose great challenges to coral health. We investigated both short- (10-day) and long-term (60-day) single and co-exposures of coral nubbins to environmentally relevant organic UV filter mixtures (200 ng/L of 12 compounds) and elevated water temperatures (30 °C) to investigate their effects and potential mechanisms of action. The initial 10-day exposure of Seriatopora caliendrum resulted in bleaching only under co-exposure conditions (compounds + temperature). The 60-day mesocosm study entailed the same exposure settings with nubbins of three species (S. caliendrum, Pocillopora acuta and Montipora aequituberculata). Bleaching (37.5 %) and mortality (12.5 %) of S. caliendrum were observed under UV filter mixture exposure. In the co-exposure treatment, 100 % S. caliendrum and P. acuta bleached associating with 100 % and 50 % mortality, respectively, and significant increase of catalase activities in P. acuta and M. aequituberculata nubbins were found. Biochemical and molecular analyses indicated significant alteration of oxidative stress and metabolic enzymes. The results suggest that upon the adverse effects of thermal stress, organic UV filter mixture at environmental concentrations can cause bleaching in corals by inducing a significant oxidative stress and detoxification burden, suggesting that emerging contaminants may play a unique role in global reef degradation.

Conservation status of upper-mesophotic octocoral habitats at Sporades Archipelago (Aegean Sea)

Octocoral forests created by the yellow sea fan Eunicella cavolini and the red sea fan Paramuricea clavata were studied at the National Marine Park of Alonissos Northern Sporades (Aegean Sea, Greece), between 30 and 45 m depth, in order to assess their conservation status and the occurrence of both natural and anthropogenic stressors. The area was characterized by rich and dense coral forests, with densities up to 55.2 colonies m^-2 for E. cavolini and 28.0 colonies m^-2 for P. clavata. The coral population showed signs of stress, although mortality was low. A combination of stressors linked to global warming and fishing impacts, including macroalgal epibiosis, tip necrosis, increasing coral feeders, and abandoned fishing gears, could impair the status of these habitats in the near future. Although the effects of climate change are global, local conservation actions may reduce direct anthropogenic impacts and enhance habitats' resilience.

Every refuge has its price: Ostreobium as a model for understanding how algae can live in rock and stay in business

Ostreobium is a siphonous green alga in the Bryopsidales (Chlorophyta) that burrows into calcium carbonate (CaCO₃) substrates. In this habitat, it lives under environmental conditions unusual for an alga (i.e., low light and low oxygen) and it is a major agent of carbonate reef bioerosion. In coral skeletons, Ostreobium can form conspicuous green bands recognizable by the naked eye and it is thought to contribute to the coral's nutritional needs. With coral reefs in global decline, there is a renewed focus on understanding Ostreobium biology and its roles in the coral holobiont. This review summarizes knowledge on Ostreobium's morphological structure, biodiversity and evolution, photosynthesis, mechanism of bioerosion and its role as a member of the coral holobiont. We discuss the resources available to study Ostreobium biology, lay out some of the uncharted territories in Ostreobium biology and offer perspectives for future research.

Tracing impact of El Niño Southern Oscillation on coastal hydrology using coral 87Sr/86Sr record from Lakshadweep, South-Eastern Arabian Sea

El Niño Southern Oscillation (ENSO) is one of the dominant climate modes influencing global precipitation and temperature. ENSO has a large impact on the monsoonal precipitations over the Indian subcontinent and thereby influences hydrological conditions. Due to dearth of long-term instrumental records of the hydrological parameters on sufficient spatial resolution, it is difficult to assess the impact of ENSO on regional hydrology. Though several geochemical proxies have been used to reconstruct past ENSO events through tracing the changes in past hydrological and climatic parameters, however, such reconstructions are often complicated by the influence of multiple processes and/or factors and their nonlinear relation with the proxy records. In this study, Sr isotope composition (⁸⁷Sr/⁸⁶Sr) was measured in Porites coral from the Lakshadweep, south-eastern Arabian Sea to reconstruct past ENSO events and to trace its regional hydrological impacts. The high precision measurements of ⁸⁷Sr/⁸⁶Sr in Lakshadweep coral show resolvable variations ranging from 0.709080 to 0.709210. The ⁸⁷Sr/⁸⁶Sr record shows an inverse relation with Niño 3.4 record; lower values matched with El Niño years and higher values with La Niña years. Our investigation reveals that ENSO driven precipitation changes impacted submarine groundwater discharge (SGD) to the Minicoy Atoll and resulted in ⁸⁷Sr/⁸⁶Sr variations of the Minicoy Atoll water. Therefore, deviation from the average seawater ⁸⁷Sr/⁸⁶Sr value can be quantified in terms of SGD contribution to the Minicoy Atoll. Our estimates based on binary mixing between seawater and SGD ⁸⁷Sr/⁸⁶Sr suggest a significant supply of SGD, maximum up to ~20 % of the total volume of the Minicoy Atoll during La Niña years due to higher rainfall compared to El Niño years. This finding highlights potential application of coral ⁸⁷Sr/⁸⁶Sr record as an alternate proxy to reconstruct past ENSO events and to trace its quantitative impact on regional hydrology, chemical and nutrient fluxes to coastal oceans via SGD.

Benthic megafaunal biodiversity of the Charlie-Gibbs fracture zone: spatial variation, potential drivers, and conservation status

The Charlie-Gibbs Fracture Zone (CGFZ) is a prominent geological feature offsetting the Mid-Atlantic Ridge (MAR), consisting of two parallel fractures, creating a highly variable seafloor bathymetry. It has been defined as the most important latitudinal biodiversity transitional zone on the MAR. Despite this recognition, the faunal communities living on the fracture zone have not been extensively described. A remotely operated vehicle (ROV) was utilised during the TOSCA (Tectonic Ocean Spreading at the Charlie-Gibbs Fracture Zone) survey. The survey included five ROV video transects at depths between 560 and 2900 m. The objectives of the study were to use this video footage to quantify benthic megafaunal density and biodiversity patterns on the CGFZ and their environmental drivers. Species accumulation curves and generalised additive modelling show that depth and the presence of hard substrates play an important role in explaining species richness and abundance at the CGFZ. Coral taxa showed highest abundance between depths of 1500 and 2000 m, while sponge taxa were more abundant between 1750 and 2250 m. A dense sponge aggregation was identified on a ridge feature at 2250 m depth. The high biodiversity and presence of dense sponge aggregations and coral gardens found in this study highlight the need for detailed surveys to help support decisions made by governing bodies on the protection status of the CGFZ.

SUPPLEMENTARY INFORMATION

The online version contains supplementary material available at 10.1007/s12526-022-01285-1.

Frontloading of stress response genes enhances robustness to environmental change in chimeric corals

Background

Chimeras are genetically mixed entities resulting from the fusion of two or more conspecifics. This phenomenon is widely distributed in nature and documented in a variety of animal and plant phyla. In corals, chimerism initiates at early ontogenic states (larvae to young spat) and results from the fusion between two or more closely settled conspecifics. When compared to genetically homogenous colonies (non-chimeras), the literature has listed ecological and evolutionary benefits for traits at the chimeric state, further positioning coral chimerism as an evolutionary rescue instrument. However, the molecular mechanisms underlying this suggestion remain unknown.

Results

To address this question, we developed field monitoring and multi-omics approaches to compare the responses of chimeric and non-chimeric colonies acclimated for 1 year at 10-m depth or exposed to a stressful environmental change (translocation from 10- to 2-m depth for 48h). We showed that chimerism in the stony coral Stylophora pistillata is associated with higher survival over a 1-year period. Transcriptomic analyses showed that chimeras lose transcriptomic plasticity and constitutively express at higher level (frontload) genes responsive to stress. This frontloading may prepare the colony to face at any time environmental stresses which explain its higher robustness.

Conclusions

These results show that chimeras are environmentally robust entities with an enhanced ability to cope with environmental stress. Results further document the potential usefulness of chimeras as a novel reef restoration tool to enhance coral adaptability to environmental change, and confirm that coral chimerism can be an evolutionary rescue instrument.

Supplementary Information

The online version contains supplementary material available at 10.1186/s12915-022-01371-7.

damicornis corals

The density and diversity of Symbiodiniaceae associated with corals can be influenced by seasonal changes . This study provided the first annual investigation of Symbiodiniaceae density and diversity associated with Acropora humilis and Pocillopora cf. damicornis corals in the Gulf of Thailand using both zooxanthellae cell count and next-generation sequencing (ITS-1, ITS-2 regions) techniques, respectively. The results from this study indicated that zooxanthellae cell densities in both coral species differ significantly. The number of zooxanthellae was negatively correlated with the physical environment variable (light intensity). The diversity within A. humilis consisted of two genera, Cladocopium (Cspc_C3: 56.39%, C3w: 33.62%, C93type1: 4.42% and Cspf: 3.59%) and a small amount of Durusdinium (D1: 1.03%) whereas P. cf. damicornis was found to be 100% associated with Durusdinium (D1: 95.58%, D6: 1.01% and D10: 2.7%) suggesting that each coral species may select their appropriate genus/species of Symbiodiniaceae in response to local environmental stressors. The results of this study provided some information on the coral-Symbiodiniaceae relationship between seasons, which may be applied to predict the potential adaptation of corals in localized reef environments.

Widespread oxyregulation in tropical corals under hypoxia

Hypoxia (low oxygen stress) is increasingly reported on coral reefs, caused by ocean deoxygenation linked to coastal nutrient pollution and ocean warming. While the ability to regulate respiration is a key driver of hypoxia tolerance in many other aquatic taxa, corals' oxyregulatory capabilities remain virtually unexplored. Here, we examine O₂-consumption patterns across 17 coral species under declining O₂ partial pressure (pO₂). All corals showed ability to oxyregulate, but total positive regulation (T_pos) varied between species, ranging from 0.41 (Pocillopora damicornis) to 2.42 (P. acuta). On average, corals performed maximum regulation effort (P_cmax) at low pO₂ (30% air saturation, corresponding to lower O₂ levels measured on natural reef systems), and exhibited detectable regulation down to as low as <10% air saturation. Our study shows that corals are not oxyconformers as previously thought, suggesting oxyregulation is likely important for survival in dynamic O₂ environments of shallow coral reefs subjected to hypoxic events.

Comparative genomics highlight the importance of lineage-specific gene families in evolutionary divergence of the coral genus, Montipora

Background

Scleractinian corals of the genus Montipora (Anthozoa, Cnidaria) possess some unusual biological traits, such as vertical transmission of algal symbionts; however, the genetic bases for those traits remain unknown. We performed extensive comparative genomic analyses among members of the family Acroporidae (Montipora, Acropora, and Astreopora) to explore genomic novelties that might explain unique biological traits of Montipora using improved genome assemblies and gene predictions for M. cactus, M. efflorescens and Astreopora myriophthalma.

Results

We obtained genomic data for the three species of comparable high quality to other published coral genomes. Comparative genomic analyses revealed that the gene families restricted to Montipora are significantly more numerous than those of Acropora and Astreopora, but their functions are largely unknown. The number of gene families specifically expanded in Montipora was much lower than the number specifically expanded in Acropora. In addition, we found that evolutionary rates of the Montipora-specific gene families were significantly higher than other gene families shared with Acropora and/or Astreopora. Of 40 gene families under positive selection (Ka/Ks ratio > 1) in Montipora, 30 were specifically detected in Montipora-specific gene families. Comparative transcriptomic analysis of early life stages of Montipora, which possesses maternally inherited symbionts, and Acropora, which lacks them, revealed that most gene families continuously expressed in Montipora, but not expressed in Acropora do not have orthologs in Acropora. Among the 30 Montipora-specific gene families under positive selection, 27 are expressed in early life stages.

Conclusions

Lineage-specific gene families were important to establish the genus Montipora, particularly genes expressed throughout early life stages, which under positive selection, gave rise to biological traits unique to Montipora. Our findings highlight evolutionarily acquired genomic bases that may support symbiosis in these stony corals and provide novel insights into mechanisms of coral-algal symbiosis, the physiological foundation of coral reefs.

Supplementary Information

The online version contains supplementary material available at 10.1186/s12862-022-02023-8.

Food-chain length determines the level of phenanthrene bioaccumulation in corals

Exposure from the dissolved-phase and through food-chains contributes to bioaccumulation of polycyclic aromatic hydrocarbons (PAHs) in organisms such as fishes and copepods. However, very few studies have investigated the accumulation of PAHs in corals. Information on dietary uptake contribution to PAHs accumulation in corals is especially limited. Here, we used Cavity-Ring-Down Spectroscopy (CRDS) to investigate the uptake rates and accumulation of a ¹³C-labeled PAH, phenanthrene, in Acropora millepora corals over 14 days. Our experiment involved three treatments representing exposure levels of increasing food-chain length. In Level W, corals were exposed to ¹³C-phenanthrene directly dissolved in seawater. In Level 1 representing herbivory, Dunaliella salina microalgal culture pre-exposed to ¹³C-phenanthrene for 48 h was added to the coral treatment jars. In Level 2 representing predation, corals were provided a diet of copepod (Parvocalanus crassirostris) nauplii fed on D. salina pre-exposed to ¹³C-phenanthrene. Bioconcentration factors (BCF) and bioaccumulation factors (BAF) were calculated as appropriate for all organisms, and biomagnification factors (BMF) were calculated for A. millepora. We found that while phenanthrene uptake rates were not significantly different for the treatments, the accumulated concentration in corals was significantly higher in Level W (33.5 ± 2.83 mg kg^-1) than in Level 1 (27.55 ± 2.77 mg kg^-1) and Level 2 (29.36 ± 3.84 mg kg^-1). Coral log BAF values increased with food-chain length; Level 2 log BAF (6.45) was higher than Level W log BCF (4.18) and Level 1 log BAF (4.5). Coral BMF was also higher for Level 2 than for Level 1. Exposure to dissolved or diet-bound phenanthrene had no significant effect on the coral symbionts' photosynthetic efficiency (F_v/F_m) as monitored by pulse-amplitude-modulation (PAM) fluorometry, indicating the PAH can be accumulated without toxic effects to their Photosystem II. Our study highlights the critical role of dietary exposure for pollutant accumulation in corals.

Elevated temperatures reduce the resilience of the Red Sea branching coral stylophora pistillata to copper pollution

Copper (Cu) is a common marine pollutant of coastal environments and can cause severe impacts on coral organisms. To date, only a few studies assessed the effects of Cu contamination in combination with elevated seawater temperatures on corals. Furthermore, experiments focusing on coral recovery during a depuration phase, and under thermal stress, are lacking. The present study investigated the physiological response of the common and thermally tolerant scleractinian coral Stylophora pistillata from the northern Red Sea to Cu contamination (2.5, 5 or 10 µg L ^- 1) in combination with thermal stress (5 °C above local ambient temperatures (26 °C)) for 23 days, and assessed the impact of elevated temperatures on its ability to recover from such pollution during a one-week depuration period. Variation in coral photo-physiological biomarkers including antioxidant defense capacity, were dose, time and temperature-dependent, and revealed additive effects of elevated temperatures. Successful recovery was achieved in ambient temperature only and was mediated by antioxidant defenses. Elevation of temperature altered the recovery dynamics during depuration, causing reduced Cu bioaccumulation and photosynthetic yield. The present study provides novel information on the effects of elevated temperature on the resilience (resistance and recovery processes) of a scleractinian coral exposed to a common marine pollutant. Our findings suggest that ocean warming may alter the resilience strategies of corals when exposed to local pollution, an impact that might have long-term consequences on the chances of survival of reefs in increasingly populated and warming coastal environments.

Seasonal tendencies of microplastics around coral reefs in selected Marine Protected National Parks of Gulf of California, Mexico

This study focuses on the presence of MPs in the sediment beds around coral reefs of MPNPs in Baja California Sur, México. Based on seasonal sampling results, comparison of MPs from Cabo Pulmo (avg. 680.25 items/100 g^-1 d.w) recorded higher values than Espiritu Santo Island (avg. 321.75 items/100 g^-1 d.w) from backshore/foreshore regions. Fibrous MPs are the dominant morphotypes followed by fragments and spheres. SEM/EDS analysis revealed that the MPs are altered texturally in surface and is bioavailable to marine organisms independent of size/shape. FTIR analysis indicate different polymers (in %) in the form of PP (70), PET (65), HDPE (59), LDPE (50), PS (30), PC (18), PU (10) and RYN (10). Most of the MPs are secondary in origin resulting from man-made and tourist's activities controlled by wave transportation and tidal currents. Existence of MPs in sediment beds around the coral reefs signals the ways for future investigations.

Alien hotspot: Benthic marine species introduced in the Brazilian semiarid coast

In this study, we provide a baseline assessment of introduced marine species along the extensive (~600 km) Brazilian semiarid coast. We reported 27 introduced and 26 cryptogenic species. Moreover, the main vectors of introduction were ballast water, shipping lines, oil and gas activities, biofouling, and rafting on plastic debris. The taxa were Ascidiacea (17 species) and Bryozoa (17), followed by Crustacea (6), Mollusca (6), Cnidaria (3), Echinodermata (3), and Porifera (1). Among these invertebrates, some species are recognized as drivers of impacts such as the invasive corals (Tubastraea tagusensis and Tubastraea coccinea), the bivalves Isognomom bicolor and Perna viridis, the crab Charybdis hellerii, the brittle star Ophiothela mirabilis, and, finally, the bryozoan Membraniporopsis tubigera. These species threaten the biodiversity of unique ecosystems such as intertidal sandstone reefs, shallow-water coral reefs, and mesophotic ecosystems. Moreover, the up-to-date results highlight that this region is a hotspot of bioinvasion in the tropical South Atlantic.

Macroalgal release of dissolved organic carbon in coral reef and its interaction with the bacteria associated with the coral Porites lutea

Macroalgae supersede corals in the reefs worldwide, converting the coral-dominant systems into algal-dominant ones. Dissolved organic carbon (DOC) released by macroalgae play a prominent role in degrading the coral reefs by stimulating the bacterial growth and metabolism. However, the long-term remineralization of macroalgal DOC and their contribution to the carbon pool are least studied. In this study, we quantified the DOC released by five species of macroalgae that affected live corals through their physical contact and their subsequent remineralization for 100 days by coral mucus bacteria. Also, we analyzed the changes in bacterial community structure after 30 days of exposure to the macroalgal DOC. All the macroalgae released a significant amount of DOC ranging from 2.2 ± 0.17 to 8.1 ± 0.36 μmol C g^-1 h^-1 (mean ± SD). After 100 days, between 9.2 and 30.9% of the macroalgal DOC remained recalcitrant to bacterial remineralization. There was no apparent change in the dominant bacterial groups exposed to the DOC released by the green macroalgae Caulerpa racemosa and Halimeda sp. In comparison, the Proteobacteria group decreased with a prominent increase in the Firmicutes, Planctomycetes, and Bacteroidetes group in the samples exposed to DOC released by the brown macroalgae Turbinaria ornata, Sargassum tenerrimum, and Padina gymnospora. These inclusive data suggest that the DOC released by different species of macroalgae differed on their lability to microbial mineralization and highlight the comparable patterns in microbial responses to macroalgal exudates across different species.

Artificial structures as biological "influencers": Hydrozoa and Anthozoa diversity in a Colombian Caribbean Marina

The Puerto Velero Marina, located on the central Caribbean coast of Colombia, is an example of an artificial structure that serves as a substrate for a vulnerable community such as cnidarians (Hydrozoa and Anthozoa). This study provides the first assessment of corals and other cnidarians inhabiting artificial marine habitats in a marginal environment of the Caribbean of Colombia. The Puerto Velero Marina was built into a 7 km² sand spit generated by sedimentation at the mouth of the Magdalena River. In this study were recorded 14 cnidarian species, among which were found 48 small colonies of scleractinian corals such as Porites, Siderastrea, Phyllangia, and Astrangia. This initial biodiversity assessment of the artificial structure provides a baseline that highlights the importance of further monitoring programs to identify non-native species that could reach this kind of hard structures.

Microplastics in zooplankton in the eastern Arabian Sea: The threats they pose to fish and corals favoured by coastal currents

The baseline study of Microplastics (MPs) in zooplankton (copepods, chaetognaths, decapods, and fish larvae) from six different zones along India's west coast (off Kanyakumari/Cape Comorin, Kochi, Mangalore, Goa, Mumbai, and Okha) in the Eastern Arabian Sea (EAS) is presented here with their vast ecosystem impacts. This investigation revealed that zooplankton in all six zones accumulated MPs pellets (52.14%), fibres (28.40%), films (10.51%), and fragments (8.95%). The highest average retention of MPs (MPs/individual) was found in fish larvae (av. 0.57 ± 0.18) while copepods had the lowest (av. 0.03 ± 0.01). The presence of low-density polyethylene, polypropylene, polystyrene, and polyethylene terephthalate was confirmed by Raman Spectra of MPs. The MPs in zooplankton found in this study (av. 22 ± 7 pieces/m³) were nearly 2-fold greater than those found in some of the world's most densely populated areas. It is shown that the strong southerly coastal currents could advect the MPs contaminated water mass too far away, having the potential to affect the fish and corals.

Recent updates on Sinularia soft coral

Marine organisms are recognized as a rich source of bioactive secondary metabolites. The remarkable abundance and diversity of bioactive small molecules isolated from soft corals displayed their essential role in drug discovery for human diseases. Sterols and terpenes, particularly cembranolides, 14-membered cyclic diterpene, demonstrated numerous biological activities, such as antitumor, antimicrobial, antiviral, antidiabetic, anti-osteoporosis and anti-inflammatory. Accordingly, continuous investigation of marine soft corals will be the way for the discovery of a plentiful number of chemical diverse natural products with various biological potentials for prospective pharmaceutical industrial applications. Such review affords plenary inspection of the total secondary metabolites isolated from the Sinularia, from 2008 until 2020, besides their natural sources as well as bioactivities whenever possible.

Ciliated protozoan occurrence and association in the pathogenesis of coral disease

Various microbial infections have significantly contributed to disease progression leading to the mortality of corals. However, the holobiont and the external surfaces of coral, including the secreted mucus, provide a varied microenvironment that attracts ciliates based on their feeding preferences. Besides, some ciliates (e.g., Philasterine scuticociliate) may enter through the injuries or lesions on corals or through their indirect interactions with other types of microbes that influence coral health. Thus, ciliates occurrence and association are described with 12 different diseases worldwide. White syndrome disease lesions have diverse ciliate associations, and higher ciliate diversity was observed with diseased genera Acropora. Also, it was described, about sixteen ciliate species ingest coral Symbiodiniaceae and histophagous ciliates for coral tissue loss as secondary invaders. However, the ciliates nature of association with the coral disease remains unclear for primary or opportunistic secondary pathogenicity. Herein, we explore the urgent need to understand the complex interactions of ciliates in coral health.

Assessing the risk of light reduction from natural sediment resuspension events and dredging activities in an inshore turbid reef environment

The reduction in benthic light from natural sediment resuspension events, dredging activities and clouds was quantified over multiple time periods (days to weeks) from a 3-year in-situ field study in the inshore turbid-zone coral communities of the Great Barrier Reef. The results were then used to examine the tolerance levels of three coral species and a sponge to light reduction and associated changes in spectral light quality (in conjunction with elevated sediment concentrations) in a 28-day laboratory-based study. All species survived the exposures but sub-lethal responses involving changes in pigmentation, lipids and lipid ratios were observed. A pocilloporid coral was the most sensitive taxon, with a 28-d EC10 value for bleaching (dissociation of the symbiosis) of 2.7 mol photons m² d^-1. The possibility of such light reduction levels occurring naturally and/or during maintenance dredging activities was then examined using the 3-year in-situ field study as part of a risk assessment.

Toxicity of two representative petroleum hydrocarbons, toluene and phenanthrene, to five Atlantic coral species

Coral reefs are keystone coastal ecosystems that can be exposed to petroleum hydrocarbons from multiple sources, and when selecting spill response methods to limit environmental damages, corals represent one of the highest valued resources for protection. Because previous research to characterize the sensitivity of coral species to petroleum hydrocarbon exposures is limited, a continuous-flow passive dosing system and toxicity testing protocol was designed to evaluate the acute effects of two representative petroleum compounds, toluene and phenanthrene, on five coral species: Acropora cervicornis, Porites astreoides, Siderastera siderea, Stephanocoenia intersepta, and Solenastrea bournoni. Using analytically confirmed exposures, sublethal and lethal endpoints were calculated for each species, and used as model inputs to determine critical target lipid body burdens (CTLBBs) for characterizing species sensitivity. Further, quantification of the time-dependent toxicity of single hydrocarbon exposures is described to provide model inputs for improved simulation of spill impacts to corals in coastal tropical environments.

Phylogenomics of Porites from the Arabian Peninsula

The advent of high throughput sequencing technologies provides an opportunity to resolve phylogenetic relationships among closely related species. By incorporating hundreds to thousands of unlinked loci and single nucleotide polymorphisms (SNPs), phylogenomic analyses have a far greater potential to resolve species boundaries than approaches that rely on only a few markers. Scleractinian taxa have proved challenging to identify using traditional morphological approaches and many groups lack an adequate set of molecular markers to investigate their phylogenies. Here, we examine the potential of Restriction-site Associated DNA sequencing (RADseq) to investigate phylogenetic relationships and species limits within the scleractinian coral genus Porites. A total of 126 colonies were collected from 16 localities in the seas surrounding the Arabian Peninsula and ascribed to 12 nominal and two unknown species based on their morphology. Reference mapping was used to retrieve and compare nearly complete mitochondrial genomes, ribosomal DNA, and histone loci. De novo assembly and reference mapping to the P. lobata coral transcriptome were compared and used to obtain thousands of genome-wide loci and SNPs. A suite of species discovery methods (phylogenetic, ordination, and clustering analyses) and species delimitation approaches (coalescent-based, species tree, and Bayesian Factor delimitation) suggested the presence of eight molecular lineages, one of which included six morphospecies. Our phylogenomic approach provided a fully supported phylogeny of Porites from the Arabian Peninsula, suggesting the power of RADseq data to solve the species delineation problem in this speciose coral genus.

A Critical Review of Organic Ultraviolet Filter Exposure, Hazard, and Risk to Corals

There has been a rapid increase in public, political, and scientific interest regarding the impact of organic ultraviolet (UV) filters to coral reefs. Such filters are found in sunscreens and other consumer products and enter the aquatic environment via direct (i.e., recreational activities, effluents) or indirect (i.e., land runoff) pathways. This review summarizes the current state of the science regarding the concentration of organic UV filters in seawater and sediment near coral reef ecosystems and in coral tissues, toxicological data from early and adult life stages of coral species, and preliminary environmental risk characterizations. Up to 14 different organic UV filters in seawater near coral reefs have been reported across 12 studies, with the majority of concentrations in the nanograms per liter range. Nine papers report toxicological findings from no response to a variety of biological effects occurring in the micrograms per liter to milligrams per liter range, in part given the wide variations in experimental design and coral species and/or life stage used. This review presents key findings; scientific data gaps; flaws in assumptions, practice, and inference; and a number of recommendations for future studies to assess the environmental risk of organic UV filters to coral reef ecosystems. Environ Toxicol Chem 2021;40:967-988. © 2021 The Authors. Environmental Toxicology and Chemistry published by Wiley Periodicals LLC on behalf of SETAC.

Microfiber abundance associated with coral tissue varies geographically on the Belize Mesoamerican Barrier Reef System

Ocean plastic pollution is a global problem that causes ecosystem degradation. Crucial knowledge gaps exist concerning patterns in microfiber abundance across regions and ecosystems, as well as the role of these pollutants within the environment. Here, we quantified the abundance of microfibers in coral samples collected from the Belize Mesoamerican Barrier Reef System (MBRS) using a polarized light microscope and identified a subsample of these to the polymer level using an Attenuated Total Reflectance Fourier Transform Infrared Spectroscopy microscope. Microfibers were found in all coral samples with rayon being identified as the most common microfiber, comprising 85% of quantified pollutants. We found a greater average abundance of microfibers in coral samples from the Sapodilla Cayes (296 ± SE 89) than in samples from the Drowned Cayes (75 ± SE 14), indicating spatial variation in microfiber abundance within coral tissue along the MBRS. These results demonstrate that corals on the Belize MBRS interact with microfibers and that microfiber abundance on reefs varies spatially due to point sources of pollution and local oceanography. As rayon from clothing typically enters the ocean through wastewater effluent, alterations to waste water infrastructure may prove useful in decreasing rayon pollution in coastal waters.

Responses of branching reef corals Acropora digitifera and Montipora digitata to elevated temperature and pCO2

Anthropogenic emission of CO₂ into the atmosphere has been increasing exponentially, causing ocean acidification (OA) and ocean warming (OW). The “business-as-usual” scenario predicts that the atmospheric concentration of CO₂ may exceed 1,000 µatm and seawater temperature may increase by up to 3 °C by the end of the 21^st century. Increases in OA and OW may negatively affect the growth and survival of reef corals. In the present study, we separately examined the effects of OW and OA on the corals Acropora digitifera and Montipora digitata, which are dominant coral species occurring along the Ryukyu Archipelago, Japan, at three temperatures (28 °C, 30 °C, and 32 °C) and following four pCO₂ treatments (400, 600, 800, and 1,000 µatm) in aquarium experiments. In the OW experiment, the calcification rate (p = 0.02), endosymbiont density, and maximum photosynthetic efficiency (Fv/Fm) (both p < 0.0001) decreased significantly at the highest temperature (32 °C) compared to those at the lower temperatures (28 °C and 30 °C) in both species. In the OA experiment, the calcification rate decreased significantly as pCO₂ increased (p < 0.0001), whereas endosymbiont density, chlorophyll content, and Fv/Fm were not affected. The calcification rate of A. digitifera showed greater decreases from 30 °C to 32 °C than that of M. digitata. The calcification of the two species responded differently to OW and OA. These results suggest that A. digitifera is more sensitive to OW than M. digitata, whereas M. digitata is more sensitive to OA. Thus, differences in the sensitivity of the two coral species to OW and OA might be attributed to differences in the endosymbiont species and high calcification rates, respectively.

Lipidomes of phylogenetically different symbiotic dinoflagellates of corals

The structural base of all membranes of symbiotic dinoflagellates (SD) is composed of glycolipids and betaine lipids, whereas triacylglycerols (TG) constitute an energy reserve and are involved in biosynthesis of glycolipids. Since data on the SD lipidome and the host's influence on symbionts' lipidome are scanty, we analyzed and compared the lipidomes of SD isolated from the zoantharian Palythoa tuberculosa and the alcyonarian Sinularia heterospiculata. A sequencing of nuclear gene regions showed that both cnidarians hosted the dinoflagellates Cladocopium sp. (subclades C1 and C3), but the zoantharian also contained the dinoflagellates Durusdinium trenchii (clade D). The presence of the thermotolerant D. trenchii resulted in a higher unsaturation of mono- and digalactosyldiacylglycerols (MGDG and DGDG), but a lower unsaturation of sulfoquinovosyldiacylglycerol (SQDG). The same features were earlier described for same SD from a reef-building coral. Hence, the profile of glycolipid molecules, which form SD thylakoid membranes, seems to be species-specific and does not depend on the host's taxonomic position. In contrast, the betaine lipid molecular species profile of diacylglyceryl-3-O-carboxyhydroxymethylcholine (DGCC), which forms SD cell membranes, can be influenced by the host. The profiles of the TG molecular species from freshly isolated SD have been determined for the first time. These molecular species can be divided on the basis of the acyl group in sn-2 position. The TG with 16:0 acyl group in sn-2 position may enrich total TG of a cnidarian colony and originate from SD cytoplasm. In contrast, TG 18:3/18:4/18:3 may be biosynthetically related with DGDG and concentrated in SD plastoglobules. Our data may be useful for further investigations of natural and technogenic variations in microalgal lipids and symbiont-host interactions in marine ecosystems.

Artificial light at night (ALAN) alters the physiology and biochemistry of symbiotic reef building corals

Artificial Light at Night (ALAN), which is the alteration of natural light levels as the result of anthropogenic light sources, has been acknowledged as an important factor that alters the functioning of marine ecosystems. Using LEDs light to mimic ALAN, we studied the effect on the physiology (symbiont and chlorophyll contents, photosynthesis, respiration, pigment profile, skeletal growth, and oxidative stress responses) of two scleractinian coral species originating from the Red Sea. ALAN induced the photoinhibition of symbiont photosynthesis, as well as an overproduction of reactive oxygen species (ROS) and an increase in oxidative damage to lipids in both coral species. The extent of the deleterious effects of ALAN on the symbiotic association and coral physiology was aligned with the severity of the oxidative stress condition experienced by the corals. The coral species Sylophora pistillata, which experienced a more severe oxidative stress condition than the other species tested, Turbinaria reniformis, also showed a more pronounced bleaching (loss of symbionts and chlorophyll content), enhanced photoinhibition and decreased photosynthetic rates. Findings of the present study further our knowledge on the biochemical mechanisms underpinning the deleterious impacts of ALAN on scleractinian corals, ultimately shedding light on the emerging threat of ALAN on coral reef ecology. Further, considering that global warming and light pollution will increase in the next few decades, future studies should be taken to elucidate the potential synergetic effects of ALAN and global climate change stressors.

Estimations of densities of marine litter on the fringing reefs of Mayotte (France - South Western Indian Ocean) - impacts on coral communities

The present study was carried out at 22 stations located on the fringing reefs of the island of Mayotte inside the perimeter of the Marine Natural Park of Mayotte (PNMM). The average assessment of the number of samples of marine litter (ML) collected at these stations was 3.9 ± 1.3 ML per 500 m² in winter and 3.8 ± 1.1 ML per 500 m² in summer. Plastic ML was dominant, representing approximately 92% of the litter collected at the stations for the two seasons. The majority was plastic ML from fishing gear (lines, nets etc.). Station 18 presented remarkable average densities of 39 ± 4.2 ML per 500 m² for the two seasons and differed from the other stations in that the ML came solely from the catchment areas, with a majority of aluminium ML (56%). Approximately half the coral colonies coming into contact with ML presented an impact dominated by the category of "Broken or abraded colonies", with 25% of the colonies being impacted. The colonies most severely impacted by ML were branch or table corals, with the greatest majority for the present study being of the genus Acropora.

Considering the rates of growth in two taxa of coral across Pacific islands

Reef-building coral taxa demonstrate considerable flexibility and diversity in reproduction and growth mechanisms. Corals take advantage of this flexibility to increase or decrease size through clonal expansion and loss of live tissue area (i.e. via reproduction and mortality of constituent polyps). The biological lability of reef-building corals may be expected to map onto varying patterns of demography across environmental contexts which can contribute to geographic variation in population dynamics. Here we explore the patterns of growth of two common coral taxa, corymbose Pocillopora and massive Porites, across seven islands in the central and south Pacific. The islands span a natural gradient of environmental conditions, including a range of pelagic primary production, a metric linked to the relative availability of inorganic nutrients and heterotrophic resources for mixotrophic corals, and sea surface temperature and thermal histories. Over a multi-year sampling interval, most coral colonies experienced positive growth (greater planar area of live tissue in second relative to first time point), though the distributions of growth varied across islands. Island-level median growth did not relate simply to estimated pelagic primary productivity or temperature. However, at locations that experienced an extreme warm-water event during the sampling interval, most Porites colonies experienced net losses of live tissue and nearly all Pocillopora colonies experienced complete mortality. While descriptive statistics of demographics offer valuable insights into trends and variability in colony change through time, simplified models predicting growth patterns based on summarized oceanographic metrics appear inadequate for robust demographic prediction. We propose that the complexity of life history strategies among colonial reef-building corals introduces unique demographic flexibility for colonies to respond to a wide breadth of environmental conditions.

Characterization of coral associated ciliates and their interactions with disease lesion progression of Indian Scleractinian corals

Ciliates associated with advanced diseased lesions of Acropora sp. and Porites sp. in the field were isolated and characterised using microscopic and molecular analysis. The identified dominant coral-associated ciliates as Holosticha sp. and Cohnilembusverminus was propagated in vitro and taken for further study. Ciliates high cell numbers with substrate containing bacteria-free mucus confirms the feeding preference for nutrients in mucus instead of bacteria. Therefore, fatty acid composition of the coral mucus was analysed and noted for the different composition levels of SAFA, MUFA and PUFA in both the genera. This suggests the possible feed specific interactions of ciliates with coral mucus and tissues. Conversely, Holosticha sp. was observed for invading the host cells for its voracious ingestion of Symbiodiniaceae cells and tissues. Moreover, the aquarium based investigation revealed that the ciliates migrate to the injured and early disease signs of corals enhancing the tissue loss and disease lesion progression. Thus, our results indicate that the ciliates interact with the immunocompromised disease corals and play a major role in progression of disease lesions leading to rapid coral mortality.

Accumulation of 13C-labelled phenanthrene in phytoplankton and transfer to corals resolved using cavity ring-down spectroscopy

Polycyclic aromatic hydrocarbons (PAHs) are widespread pollutants in marine ecosystems including threatened and potentially sensitive coral reefs. Lower organisms such as phytoplankton, known to bioconcentrate PAHs, could serve as potential entry points for these chemicals into higher trophic levels. Here, we present a novel method using a ¹³C-labelled PAH and cavity ring-down spectroscopy (CRDS) to investigate accumulation, uptake rates and trophic transfer of PAHs in corals, which are key organisms to sustain biodiversity in tropical seas. We quantified the accumulation of ¹³C-phenanthrene in the marine microalga Dunaliella salina, and in the coral Acropora millepora after diffusive uptake from seawater or dietary uptake via labelled D. salina. Additionally, we monitored the photophysiological health of D. salina and A. millepora during phenanthrene exposure by pulse-amplitude modulation (PAM) fluorometry. Dose-dependent accumulation of ¹³C-phenanthrene in the microalga showed a mean bioconcentration factor (BCF) of 2590 ± 787 L kg^-1 dry weight. Corals accumulated phenanthrene from both exposure routes. While uptake of ¹³C-phenanthrene in corals was faster through aqueous exposure than dietary exposure, passive diffusion showed larger variability between individuals and both routes resulted in accumulation of similar concentrations of phenanthrene. The ¹³C-PAH labelling and analysis by CRDS proved to be a highly sensitive method. The use of stable isotopic label eliminated additional toxicity and risks by radioactive isotopic-labelling, and CRDS reduced the analytical complexity of PAH (less biomass, no extraction, fast analysis). The simultaneous, precise quantification of both carbon content and ¹³C/¹²C ratio (δ¹³C) enabled accurate determination of ¹³C-phenanthrene accumulation and uptake rate. This is the first study to provide empirical evidence for accumulation of phenanthrene in a phytoplankton-coral food chain.

Recent Patents and Discovery of Anti-inflammatory Agents from Marine Source

BACKGROUND

Inflammation has become pathology in the majority of the prevalent diseases such as diabetes, atherosclerosis, epilepsy and neurodegenerative disorders. Anti-inflammatory drugs work wonder in all these conditions, where the patient has become refractory to standard treatment. However, available anti-inflammatory agents have side effects associated with chronic use, thus if we could develop safe and efficacious molecules, quality of health care provided will improve. Since plant sources have been extensively explored, the focus needs to be shifted on the alternative natural sources of anti-inflammatory agents. Water bodies especially the sea and ocean are under investigation to find agents which can tackle inflammation.

OBJECTIVE

This article reviews anti-inflammatory agents obtained from five types of marine organisms namely microalgae, sea cucumber, mussels, sponges and corals.

METHODS

A literature search was conducted using PubMed/Science Direct with keywords marine organisms, inflammation, marine sponges, sea cucumber, mussels, corals and microalgae. Patents were searched using the key terms inflammation, marine agents from www.google.com/patents, www.uspto.gov, http://espacenet.com, www.freepatentsonline.com, www.wipo.int/pctdb/en/searchsimp. jsp and www.freshpatents.com.

RESULTS

Literature and current patents have revealed applications of anti-inflammatory agents from marine organisms in pharmaceuticals and cosmeceuticals. These agents are used to treat inflammatory disorders ranging from minor allergy to chronic conditions like rheumatoid arthritis. Marine waste is also a valuable resource for nutraceuticals and anti-inflammatory agents.

CONCLUSION

The findings reveal that marine organisms could be a promising source of novel antiinflammatory agents. However, further investigations are suggested for the isolation and identification of bioactive, exploring the mechanism of action and evaluating the efficacy in various inflammatory conditions.

Do microplastics affect the zoanthid Zoanthus sociatus?

Microplastics (1 μm-5 mm), a ubiquitous and persistent marine pollutant, pose a severe threat to coral reefs when recently associated with physiological distress and increased diseases on corals. Studies conducted so far have only reported effects on scleractinian species. Knowledge about its effects on other corals (e.g. Order Zoantharia) remains uncovered, and responses at biochemical levels remain poorly documented. This study aimed to assess the potential effects induced by the presence of microplastics (1 and 10 mg L^-1 low-density polyethylene, LDPE MP, or polyvinyl chloride, PVC MP) in the tropical and subtropical cosmopolitan species Zoanthus sociatus (order Zoantharia. Anthozoa: Hexacorallia), at organism level (survival and behaviour), endosymbionts (photosynthetic efficiency) and the cellular level (oxidative stress, detoxification capacity and energy metabolism). In a short-term exposure (96 h), this species was more sensitive to PVC MP. The presence of this polymer at a concentration of 10 mg L^-1 caused a ten-fold higher adhesion to the coral epidermis, increased photosynthetic efficiency, lipid peroxidation, and antioxidant defences; without, however, inducing energetic costs. Although the observed physiological and biochemical effects did not compromise Z. sociatus survival in the short term, it does not rule out potential long-term (cumulative) effects that could endanger this and other physiologically similar species that underlie coral reefs.

Diseases and pathogens of marine invertebrate corals in Indian reefs

Diseases in marine invertebrate corals have been reported worldwide and have been associated with infection by various microbial pathogens that cause massive mortality. Several bacterial species, especially Vibrio species but also members of the cyanobacteria, fungi, viruses, and protists, are described as important pathogens associated with coral disease and mortality. The present work provides an updated overview of main diseases and implicated microbial species affecting corals in Indian reefs. Further study on pathogen diversity, classification, spread and environmental factors on pathogen-host interactions may contribute a better understanding of the coral diseases.

Latitudinal variation in reef coral tissue thickness in the South China Sea: Potential linkage with coral tolerance to environmental stress

Coral tissue thickness (CTT) is an effective indicator of the adaptability of corals to environmental stress, but the relationships between the spatial and intergeneric variation of coral tissue across latitudes and tolerance to environmental stress are not well understood. To investigate this, the CTT of 768 specimens of 10 typical coral genera and surrounding seawater parameters were measured in six coral reef regions (CRRs) across the 9-22°N latitudes in the South China Sea (SCS). Results showed significant differences in CTT between different genera of corals and CRRs. CTTs were significantly higher in the northern SCS than in the southern SCS. There was also notable intergeneric variation, with the abundance of branching Acropora and foliaceous Pavona being significantly lower than that of massive Porites, Galaxea, Favia, Favites, Hydnophora, Platygyra, and encrusting Montipora, Psammocora across these CRRs. Redundancy analysis showed that dissolved inorganic nitrogen (DIN), soluble reactive phosphorus (SRP), sea surface temperature (SST), turbidity, and transparency were the main factors affecting CTT. Overall CTT, irrespective of genus, was significantly positively correlated with DIN, SRP, and latitude, but was significantly negatively correlated with transparency and SST. Further analysis suggested that corals in the southern SCS are mainly threatened by thermal stress, whereas in the northern SCS, corals have often suffered from destructive anthropogenic disturbance. Although seawater conditions were normal during on-site investigation, a large number of branching corals (e.g., Acropora corals) have been lost in the last several decades due to destructive human activity. In contrast, massive and encrusting corals may have higher energy reserves and photo-protective capacities due to their thicker tissues, and consequently have higher tolerance to environmental stress. Therefore, the coral communities of the SCS have gradually been transformed from branching corals to massive/encrusting corals.

Deep-sea corals provide new insight into the ecology, evolution, and the role of plastids in widespread apicomplexan symbionts of anthozoans

BACKGROUND

Apicomplexans are the causative agents of major human diseases such as malaria and toxoplasmosis. A novel group of apicomplexans, recently named corallicolids, have been detected in corals inhabiting tropical shallow reefs. These apicomplexans may represent a transitional lifestyle between free-living phototrophs and obligate parasites. To shed light on the evolutionary history of apicomplexans and to investigate their ecology in association with corals, we screened scleractinians, antipatharians, alcyonaceans, and zoantharians from shallow, mesophotic, and deep-sea communities. We detected corallicolid plastids using 16S metabarcoding, sequenced the nuclear 18S rRNA gene of corallicolids from selected samples, assembled and annotated the plastid and mitochondrial genomes from a corallicolid that associates with a deep-sea coral, and screened the metagenomes of four coral species for corallicolids.

RESULTS

We detected 23 corallicolid plastotypes that were associated with 14 coral species from three orders and depths down to 1400 m. Individual plastotypes were restricted to coral hosts within a single depth zone and within a single taxonomic order of corals. Some clusters of closely related corallicolids were revealed that associated with closely related coral species. However, the presence of divergent corallicolid lineages that associated with similar coral species and depths suggests that corallicolid/coral relations are flexible over evolutionary timescales and that a large diversity of apicomplexans may remain undiscovered. The corallicolid plastid genome from a deep-sea coral contained four genes involved in chlorophyll biosynthesis: the three genes of the LIPOR complex and acsF.

CONCLUSIONS

The presence of corallicolid apicomplexans in corals below the photic zone demonstrates that they are not restricted to shallow-water reefs and are more general anthozoan symbionts. The presence of LIPOR genes in the deep-sea corallicolid precludes a role involving photosynthesis and suggests they may be involved in a different function. Thus, these genes may represent another set of genetic tools whose function was adapted from photosynthesis as the ancestors of apicomplexans evolved towards parasitic lifestyles. Video abstract.

Parrotfish predation drives distinct microbial communities in reef-building corals

BACKGROUND

Coral-associated microbial communities are sensitive to multiple environmental and biotic stressors that can lead to dysbiosis and mortality. Although the processes contributing to these microbial shifts remain inadequately understood, a number of potential mechanisms have been identified. For example, predation by various corallivore species, including ecologically-important taxa such as parrotfishes, may disrupt coral microbiomes via bite-induced transmission and/or enrichment of potentially opportunistic bacteria. Here, we used a combination of mesocosm experiments and field-based observations to investigate whether parrotfish corallivory can alter coral microbial assemblages directly and to identify the potentially relevant pathways (e.g. direct transmission) that may contribute to these changes.

RESULTS

Our mesocosm experiment demonstrated that predation by the parrotfish Chlorurus spilurus on Porites lobata corals resulted in a 2-4x increase in bacterial alpha diversity of the coral microbiome and a shift in bacterial community composition after 48 h. These changes corresponded with greater abundance of both potentially beneficial (i.e. Oceanospirillum) and opportunistic bacteria (i.e. Flammeovirgaceae, Rhodobacteraceae) in predated compared to mechanically wounded corals. Importantly, many of these taxa were detectable in C. spilurus mouths, but not in corals prior to predation. When we sampled bitten and unbitten corals in the field, corals bitten by parrotfishes exhibited 3x greater microbial richness and a shift in community composition towards greater abundance of both potential beneficial symbionts (i.e. Ruegeria) and bacterial opportunists (i.e. Rhodospiralles, Glaciecola). Moreover, we observed 4x greater community variability in naturally bitten vs. unbitten corals, a potential indicator of dysbiosis. Interestingly, some of the microbial taxa detected in naturally bitten corals, but not unbitten colonies, were also detected in parrotfish mouths.

CONCLUSIONS

Our findings suggest that parrotfish corallivory may represent an unrecognized route of bacterial transmission and/or enrichment of rare and distinct bacterial taxa, both of which could impact coral microbiomes and health. More broadly, we highlight how underappreciated pathways, such as corallivory, may contribute to dysbiosis within reef corals, which will be critical for understanding and predicting coral disease dynamics as reefs further degrade.

Leaching of flame-retardants from polystyrene debris: Bioaccumulation and potential effects on coral

Marine plastic debris can act as a reservoir of chemical additives that can pose a potential threat to sensitive ecosystems such as coral reefs. A survey of foam macrodebris collected on beaches indeed revealed high concentrations of hexabromocyclododecanes (ΣHBCDD) in polystyrene (PS) samples (up to 1940 μg g^-1). Results also showed that PS fragments can still leach over 150 ng g^-1 d^-1 of ΣHBCDD (primarily as the α-isomer) for relatively long durations, and that these additives are readily bioaccumulated and well-retained by corals. Despite significant HBCDD bioaccumulation in coral tissue, short-term exposure to HBCDD or PS leachate had no considerable effect on coral photosynthetic activity, symbiont concentration and chlorophyll content. Exposure to the PS leachate did however cause consistent polyp retraction in nubbins over the 5-day exposure. This response was not observed in animals exposed to HBCDD alone, suggesting that another constituent of the leachate stressed corals.

The Scleractinia (Cnidaria: Anthozoa) of Abu-Musa and Sirri Islands, Persian Gulf

Parisa Alidoost Salimi, Pargol Ghavam Mostafavi, Chaolun Allen Chen, Seyed Mohammad Reza Fatemi, and Michel Pichon (2018) There are many islands in the Iranian waters, but little is known about their coral species. This is a first attempt to describe and illustrate the coral species occurring in Abu-Musa and Sirri Islands. Overall, 26 species belonging to 9 families are reported, and three unidentified species and two species are added to coral communities of Iran. This study also provides overall insight on coral fauna in the Persian Gulf.

The plasticity of gonad development of sexual reproduction in a scleractinian coral, Porites lichen

Metazoans have evolved a complexity of sexual system and gonad development, however, sexual reproduction of scleractinian corals is not well understood. This study aimed to address the sexual system and gametogenesis in Porites lichen, a common species in the Indo-West Pacific. This study represents the first description of sexual system, which were determined by histological analysis of the samples collected in northern Taiwan. In addition, female and hermaphroditic colonies were separately cultured in aquarium to further monitor the release of eggs/larvae and thereby confirm the breeding system. The results demonstrate that P. lichen is a polygamodioecious brooder and displays seasonal gametogenesis and embryogenesis that ends in late summer. In hermaphroditic colonies, male polyps are predominant and hermaphroditic polyps make up a very small percent (1%-19.3%). In addition, two new gametogenic features were observed from the histological analysis: 1) oocytes developed within the spermaries in hermaphroditic polyps during the early stage of gametogenesis and 2) melanin granular cells were clustered in spermaries in both male and hermaphroditic colonies. This study demonstrated the plasticity of gametogenesis and melanin related cells appeared in corals, which provides an important information to explore hormones and molecular mechanism involving in gonadal arrangement and production of melanin for further studies.

Rare coral under the genomic microscope: timing and relationships among Hawaiian Montipora

Background

Evolutionary patterns of scleractinian (stony) corals are difficult to infer given the existence of few diagnostic characters and pervasive phenotypic plasticity. A previous study of Hawaiian Montipora (Scleractinia: Acroporidae) based on five partial mitochondrial and two nuclear genes revealed the existence of a species complex, grouping one of the rarest known species (M. dilatata, which is listed as Endangered by the International Union for Conservation of Nature - IUCN) with widespread corals of very different colony growth forms (M. flabellata and M. cf. turgescens). These previous results could result from a lack of resolution due to a limited number of markers, compositional heterogeneity or reflect biological processes such as incomplete lineage sorting (ILS) or introgression.

Results

All 13 mitochondrial protein-coding genes from 55 scleractinians (14 lineages from this study) were used to evaluate if a recent origin of the M. dilatata species complex or rate heterogeneity could be compromising phylogenetic inference. Rate heterogeneity detected in the mitochondrial data set seems to have no significant impacts on the phylogenies but clearly affects age estimates. Dating analyses show different estimations for the speciation of M. dilatata species complex depending on whether taking compositional heterogeneity into account (0.8 [0.05–2.6] Myr) or assuming rate homogeneity (0.4 [0.14–0.75] Myr). Genomic data also provided evidence of introgression among all analysed samples of the complex. RADseq data indicated that M. capitata colour morphs may have a genetic basis.

Conclusions

Despite the volume of data (over 60,000 SNPs), phylogenetic relationships within the M. dilatata species complex remain unresolved most likely due to a recent origin and ongoing introgression. Species delimitation with genomic data is not concordant with the current taxonomy, which does not reflect the true diversity of this group. Nominal species within the complex are either undergoing a speciation process or represent ecomorphs exhibiting phenotypic polymorphisms.

Electronic supplementary material

The online version of this article (10.1186/s12862-019-1476-2) contains supplementary material, which is available to authorized users.

Natural products against cancer: Review on phytochemicals from marine sources in preventing cancer

Marine natural products have as of now been acknowledged as the most important source of bioactive substances and drug leads. Marine flora and fauna, such as algae, bacteria, sponges, fungi, seaweeds, corals, diatoms, ascidian etc. are important resources from oceans, accounting for more than 90% of the total oceanic biomass. They are taxonomically different with huge productive and are pharmacologically active novel chemical signatures and bid a tremendous opportunity for discovery of new anti-cancer molecules. The water bodies a rich source of potent molecules which improve existence suitability and serve as chemical shield against microbes and little or huge creatures. These molecules have exhibited a range of biological properties antioxidant, antibacterial, antitumour etc. In spite of huge resources enriched with exciting chemicals, the marine floras and faunas are largely unexplored for their anticancer properties. In recent past, numerous marine anticancer compounds have been isolated, characterized, identified and are under trials for human use. In this write up we have tried to compile about marine-derived compounds anticancer biological activities of diverse flora and fauna and their underlying mechanisms and the generous raise in these compounds examined for malignant growth treatment in the course of the most recent quite a long while.

Distribution of deep-water corals, sponges, and demersal fisheries landings in Southern California, USA: implications for conservation priorities

Deep-sea corals in Southern California are diverse and abundant but subject to multiple stressors, including bottom-contact fisheries using mobile and fixed gear. There is a need for more information on the distribution of these taxa in relation to the distribution of demersal fishing effort, and the distribution of marine protected areas, in order to improve spatial planning. There are many marine managed areas in Southern California, including essential fish habitat (EFH) areas, conservation areas, and a national marine sanctuary, but specific areas of overlap between bottom fishing and benthic epifauna are poorly known. Groundfish surveys were conducted by the National Marine Fisheries Service using a remotely operated vehicle throughout Southern California between 2003 and 2011 to document abundance and distribution of deep-water rockfish and flatfish to a depth of 500 m. Corals and sponges were also common in these images, providing an opportunity to examine these communities. Analyses of 34,792 still images revealed abundance and diversity of coral and sponge taxa, as well as frequency of fishing debris. The occurrence data were overlaid in a geographic information system with landings data for deep-water (>50 m) demersal fisheries to identify areas of spatial overlap. Corals or sponges were observed in 23% of images. A total of 15 coral genera and six sponge morphotypes were identified. A total of 70 species codes were targeted by deep-water demersal fisheries operating below 50 m for years 2007-2011. A novel priority-setting algorithm was developed to identify areas of high richness, abundance, and fishing intensity (RAFi). Several highly-ranked areas were already protected as EFH (Footprint, Piggy Bank). Other highly-ranked sites (West Catalina Island, San Clemente Island, 9-Mile Bank, Santa Rosa Flats) were encompassed by transient gear restrictions, such as Rockfish conservation areas, but are now recommended for permanent protection by the Pacific Fishery Management Council.