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Hajdu C, Molnár BP, Waterman JM, Machado RAR, Radványi D, Fónagy A, Khan SA, Vassor T, Biet B, Erb M, Kárpáti Z, Robert CAM. Volatile-mediated oviposition preference for healthy over root-infested plants by the European corn borer. PLANT, CELL & ENVIRONMENT 2024; 47:2228-2239. [PMID: 38483021 DOI: 10.1111/pce.14876] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2023] [Revised: 02/21/2024] [Accepted: 02/25/2024] [Indexed: 04/30/2024]
Abstract
The selection of oviposition sites by female moths is crucial in shaping their progeny performance and survival, and consequently in determining insect fitness. Selecting suitable plants that promote the performance of the progeny is referred to as the Preference-Performance hypothesis (or 'mother-knows-best'). While root infestation generally reduces the performance of leaf herbivores, little is known about its impact on female oviposition. We investigated whether maize root infestation by the Western corn rootworm (WCR) affects the oviposition preference and larval performance of the European corn borer (ECB). ECB females used leaf volatiles to select healthy plants over WCR-infested plants. Undecane, a compound absent from the volatile bouquet of healthy plants, was the sole compound to be upregulated upon root infestation and acted as a repellent for first oviposition. ECB larvae yet performed better on plants infested below-ground than on healthy plants, suggesting an example of 'bad motherhood'. The increased ECB performance on WCR-infested plants was mirrored by an increased leaf consumption, and no changes in the plant primary or secondary metabolism were detected. Understanding plant-mediated interactions between above- and below-ground herbivores may help to predict oviposition decisions, and ultimately, to manage pest outbreaks in the field.
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Affiliation(s)
- Csengele Hajdu
- Centre for Agricultural Research, Plant Protection Institute, Budapest, Hungary
| | - Béla Péter Molnár
- Centre for Agricultural Research, Plant Protection Institute, Budapest, Hungary
| | - Jamie M Waterman
- Institute of Plant Sciences, University of Bern, Bern, Switzerland
| | - Ricardo Alberto Ruiz Machado
- Institute of Plant Sciences, University of Bern, Bern, Switzerland
- Institute of Biology, University of Neuchâtel, Neuchâtel, Switzerland
| | - Dalma Radványi
- Centre for Agricultural Research, Plant Protection Institute, Budapest, Hungary
- Department of Hospitality, Faculty of Commerce, Hospitality and Tourism, Budapest Business University, Budapest, Hungary
| | - Adrien Fónagy
- Centre for Agricultural Research, Plant Protection Institute, Budapest, Hungary
| | | | - Thibault Vassor
- Institute of Plant Sciences, University of Bern, Bern, Switzerland
| | - Baptiste Biet
- Institute of Plant Sciences, University of Bern, Bern, Switzerland
| | - Matthias Erb
- Institute of Plant Sciences, University of Bern, Bern, Switzerland
| | - Zsolt Kárpáti
- Centre for Agricultural Research, Plant Protection Institute, Budapest, Hungary
- Department of Animal Ecology and Tropical Biology, Biocenter, University of Würzburg, Würzburg, Germany
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Soliman S, Wang Y, Han Z, Pervaiz T, El-kereamy A. Strigolactones in Plants and Their Interaction with the Ecological Microbiome in Response to Abiotic Stress. PLANTS (BASEL, SWITZERLAND) 2022; 11:3499. [PMID: 36559612 PMCID: PMC9781102 DOI: 10.3390/plants11243499] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/27/2022] [Revised: 12/07/2022] [Accepted: 12/08/2022] [Indexed: 06/17/2023]
Abstract
Phytohormones play an essential role in enhancing plant tolerance by responding to abiotic stresses, such as nutrient deficiency, drought, high temperature, and light stress. Strigolactones (SLs) are carotenoid derivatives that occur naturally in plants and are defined as novel phytohormones that regulate plant metabolism, growth, and development. Strigolactone assists plants in the acquisition of defensive characteristics against drought stress by initiating physiological responses and mediating the interaction with soil microorganisms. Nutrient deficiency is an important abiotic stress factor, hence, plants perform many strategies to survive against nutrient deficiency, such as enhancing the efficiency of nutrient uptake and forming beneficial relationships with microorganisms. Strigolactone attracts various microorganisms and provides the roots with essential elements, including nitrogen and phosphorus. Among these advantageous microorganisms are arbuscular mycorrhiza fungi (AMF), which regulate plant metabolic activities through phosphorus providing in roots. Bacterial nodulations are also nitrogen-fixing microorganisms found in plant roots. This symbiotic relationship is maintained as the plant provides organic molecules, produced in the leaves, that the bacteria could otherwise not independently generate. Related stresses, such as light stress and high-temperature stress, could be affected directly or indirectly by strigolactone. However, the messengers of these processes are unknown. The most prominent connector messengers have been identified upon the discovery of SLs and the understanding of their hormonal effect. In addition to attracting microorganisms, these groups of phytohormones affect photosynthesis, bridge other phytohormones, induce metabolic compounds. In this article, we highlighted the brief information available on SLs as a phytohormone group regarding their common related effects. In addition, we reviewed the status and described the application of SLs and plant response to abiotic stresses. This allowed us to comprehend plants' communication with the ecological microbiome as well as the strategies plants use to survive under various stresses. Furthermore, we identify and classify the SLs that play a role in stress resistance since many ecological microbiomes are unexplained.
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Affiliation(s)
- Sabry Soliman
- Department of Botany and Plant Sciences, University of California Riverside, Riverside, CA 92521, USA
- Department of Horticulture, Faculty of Agriculture, Ain Shams University, Cairo 11566, Egypt
- Department of Fruit Science, College of Horticulture, China Agriculture University, Beijing 100083, China
| | - Yi Wang
- Department of Fruit Science, College of Horticulture, China Agriculture University, Beijing 100083, China
| | - Zhenhai Han
- Department of Fruit Science, College of Horticulture, China Agriculture University, Beijing 100083, China
| | - Tariq Pervaiz
- Department of Botany and Plant Sciences, University of California Riverside, Riverside, CA 92521, USA
| | - Ashraf El-kereamy
- Department of Botany and Plant Sciences, University of California Riverside, Riverside, CA 92521, USA
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Dabré ÉE, Brodeur J, Hijri M, Favret C. The Effects of an Arbuscular Mycorrhizal Fungus and Rhizobium Symbioses on Soybean Aphid Mostly Fail to Propagate to the Third Trophic Level. Microorganisms 2022; 10:microorganisms10061158. [PMID: 35744676 PMCID: PMC9230877 DOI: 10.3390/microorganisms10061158] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2022] [Revised: 05/31/2022] [Accepted: 06/01/2022] [Indexed: 12/10/2022] Open
Abstract
The cascading effects of microbe–plant symbioses on the second trophic level, such as phytophagous insects, have been most studied. However, few studies have examined the higher third trophic level, i.e., their natural enemies. We investigated the effects of the symbiotic associations between an arbuscular mycorrhizal (AM) fungus, Rhizophagus irregularis (Glomerales: Glomeraceae), a nitrogen-fixing bacterium, Bradyrhizobium japonicum (Rhizobiales: Bradyrhizobiaceae), and soybean, Glycine max (L.) Merr. (Fabaceae) on two natural enemies of the soybean aphid, Aphis glycines Matsumura (Hemiptera: Aphididae), the ladybird beetle Coleomegilla maculata (De Geer) (Coleoptera: Coccinellidae), and the parasitoid Aphelinus certus Yasnosh (Hymenoptera: Aphelinidae). We measured the growth and survival in the predator and parasitoid reared on aphids feeding on soybean inoculated seedlings. The rhizobium symbiosis alone was affected with a decreased rate of parasitoid emergence, presumably due to decreased host quality. However, number of mummies, sex-ratio, development time, and parasitoid size were all unaffected by inoculation. AM fungus alone or co-inoculated with the rhizobium was unaffected with any of the parameters of the parasitoid. For the predator, none of the measured parameters was affected with any inoculant. Here, it appears that whatever benefits the microbe–plant symbioses confer on the second trophic level are little transferred up to the third.
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Affiliation(s)
- Élisée Emmanuel Dabré
- Institut de Recherche en Biologie Végétale, Département de Sciences Biologiques, Université de Montréal, 4101 rue Sherbrooke Est, Montréal, QC H1X 2B2, Canada; (J.B.); (M.H.); (C.F.)
- Correspondence: ; Tel.: +1-514-649-7152 or +226-71075150
| | - Jacques Brodeur
- Institut de Recherche en Biologie Végétale, Département de Sciences Biologiques, Université de Montréal, 4101 rue Sherbrooke Est, Montréal, QC H1X 2B2, Canada; (J.B.); (M.H.); (C.F.)
| | - Mohamed Hijri
- Institut de Recherche en Biologie Végétale, Département de Sciences Biologiques, Université de Montréal, 4101 rue Sherbrooke Est, Montréal, QC H1X 2B2, Canada; (J.B.); (M.H.); (C.F.)
- African Genome Center, Mohammed VI Polytechnic University (UM6P), Lot 660, Hay Moulay Rachid, Ben Guerir 43150, Morocco
| | - Colin Favret
- Institut de Recherche en Biologie Végétale, Département de Sciences Biologiques, Université de Montréal, 4101 rue Sherbrooke Est, Montréal, QC H1X 2B2, Canada; (J.B.); (M.H.); (C.F.)
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Fu R, Feng H, Dini-Andreote F, Wang Z, Bo C, Cao W, Yang K, Liu M, Yang T, Shen Q, Xu Y, Wei Z. Modulation of the Tomato Rhizosphere Microbiome via Changes in Root Exudation Mediated by the Ethylene Receptor NR. Microorganisms 2021; 9:2456. [PMID: 34946058 PMCID: PMC8705318 DOI: 10.3390/microorganisms9122456] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2021] [Revised: 11/23/2021] [Accepted: 11/25/2021] [Indexed: 11/17/2022] Open
Abstract
Plant hormones have been recently shown to exert an indirect influence on the recruitment of plant-associated microbiomes. However, it remains unclear the extent to which the disruption of the ethylene (ET) signaling pathway affects the assembly and functioning of plant-root microbiomes. In this study, the Never-ripe tomato mutant (Nr) was profiled for differences compared to the wild type (control). Tomato plants were subjected to root exudate profiling and the characterization of bacterial and fungal communities. Compared to the control, Nr revealed differences in the composition of root exudates, including lower amounts of esculetin, gallic acid, L-fucose, eicosapentaenoic acid, and higher amounts of β-aldehyde. Interestingly, Nr significantly differed in the composition and functioning of the rhizosphere bacterial community. We also identified the taxa that occurred at relatively higher abundances in Nr, including the genus Lysobacter, which displayed a significant negative correlation with changes in eicosapentaenoic acid and esculetin, and a significant positive correlation with changes in β-aldehyde. Taken together, our study provides evidence that a mutation in the ET receptor exerts predictable changes in the root-associated microbial taxa of tomato plants. These indirect effects can potentially be explored towards new strategies to engineer beneficial plant microbiomes via targeted changes in plant genetics and physiology.
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Affiliation(s)
- Ruixin Fu
- Jiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Waste Resource Utilization, National Engineering Research Center for Organic-Based Fertilizers, Nanjing Agricultural University, Nanjing 210095, China; (R.F.); (H.F.); (Z.W.); (C.B.); (W.C.); (K.Y.); (Q.S.); (Y.X.); (Z.W.)
| | - Haichao Feng
- Jiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Waste Resource Utilization, National Engineering Research Center for Organic-Based Fertilizers, Nanjing Agricultural University, Nanjing 210095, China; (R.F.); (H.F.); (Z.W.); (C.B.); (W.C.); (K.Y.); (Q.S.); (Y.X.); (Z.W.)
| | - Francisco Dini-Andreote
- Department of Plant Science and Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA 16801, USA;
| | - Zhen Wang
- Jiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Waste Resource Utilization, National Engineering Research Center for Organic-Based Fertilizers, Nanjing Agricultural University, Nanjing 210095, China; (R.F.); (H.F.); (Z.W.); (C.B.); (W.C.); (K.Y.); (Q.S.); (Y.X.); (Z.W.)
| | - Chunbin Bo
- Jiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Waste Resource Utilization, National Engineering Research Center for Organic-Based Fertilizers, Nanjing Agricultural University, Nanjing 210095, China; (R.F.); (H.F.); (Z.W.); (C.B.); (W.C.); (K.Y.); (Q.S.); (Y.X.); (Z.W.)
| | - Wenhui Cao
- Jiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Waste Resource Utilization, National Engineering Research Center for Organic-Based Fertilizers, Nanjing Agricultural University, Nanjing 210095, China; (R.F.); (H.F.); (Z.W.); (C.B.); (W.C.); (K.Y.); (Q.S.); (Y.X.); (Z.W.)
| | - Keming Yang
- Jiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Waste Resource Utilization, National Engineering Research Center for Organic-Based Fertilizers, Nanjing Agricultural University, Nanjing 210095, China; (R.F.); (H.F.); (Z.W.); (C.B.); (W.C.); (K.Y.); (Q.S.); (Y.X.); (Z.W.)
| | - Mingchun Liu
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610065, China;
| | - Tianjie Yang
- Jiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Waste Resource Utilization, National Engineering Research Center for Organic-Based Fertilizers, Nanjing Agricultural University, Nanjing 210095, China; (R.F.); (H.F.); (Z.W.); (C.B.); (W.C.); (K.Y.); (Q.S.); (Y.X.); (Z.W.)
| | - Qirong Shen
- Jiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Waste Resource Utilization, National Engineering Research Center for Organic-Based Fertilizers, Nanjing Agricultural University, Nanjing 210095, China; (R.F.); (H.F.); (Z.W.); (C.B.); (W.C.); (K.Y.); (Q.S.); (Y.X.); (Z.W.)
| | - Yangchun Xu
- Jiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Waste Resource Utilization, National Engineering Research Center for Organic-Based Fertilizers, Nanjing Agricultural University, Nanjing 210095, China; (R.F.); (H.F.); (Z.W.); (C.B.); (W.C.); (K.Y.); (Q.S.); (Y.X.); (Z.W.)
| | - Zhong Wei
- Jiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Waste Resource Utilization, National Engineering Research Center for Organic-Based Fertilizers, Nanjing Agricultural University, Nanjing 210095, China; (R.F.); (H.F.); (Z.W.); (C.B.); (W.C.); (K.Y.); (Q.S.); (Y.X.); (Z.W.)
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Baseline Data of the Fungal Phytobiome of Three Sorghum ( Sorghum bicolor) Cultivars in South Africa using Targeted Environmental Sequencing. J Fungi (Basel) 2021; 7:jof7110978. [PMID: 34829265 PMCID: PMC8622221 DOI: 10.3390/jof7110978] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Revised: 11/02/2021] [Accepted: 11/12/2021] [Indexed: 11/17/2022] Open
Abstract
Plant-associated fungi, or the mycobiome, inhabit plant surfaces above ground, reside in plant tissues as endophytes, or are rhizosphere in the narrow zone of soil surrounding plant roots. Studies have characterized mycobiomes of various plant species, but little is known about the sorghum mycobiome, especially in Africa, despite sorghum being one of the most important indigenous and commercial cereals in Africa. In this study, the mycobiome associated with above- and below-ground tissues of three commercial sorghum cultivars, as well as from rhizosphere and surrounding bulk soil samples, were sequenced using targeted sequencing with the Illumina MiSeq platform. Relative abundance differences between fungal communities were found between above-ground and below-ground niches, with most differences mostly in the dominant MOTUs, such as Davidiellaceae sp. (Cladosporium), Didymellaceae sp. 1 (Phoma), Fusarium, Cryptococcus and Mucor. Above-ground communities also appeared to be more diverse than below-ground communities, and plants harboured the most diversity. A considerable number of MOTUs were shared between the cultivars although, especially for NS5511, their abundances often differed. Several of the detected fungal groups include species that are plant pathogens of sorghum, such as Fusarium, and, at low levels, Alternaria and the Ustilaginomycetes. Findings from this study illustrate the usefulness of targeted sequencing of the ITS rDNA gene region (ITS2) to survey and monitor sorghum fungal communities and those from associated soils. This knowledge may provide tools for disease management and crop production and improvement.
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Shrestha HK, Appidi MR, Villalobos Solis MI, Wang J, Carper DL, Burdick L, Pelletier DA, Doktycz MJ, Hettich RL, Abraham PE. Metaproteomics reveals insights into microbial structure, interactions, and dynamic regulation in defined communities as they respond to environmental disturbance. BMC Microbiol 2021; 21:308. [PMID: 34749649 PMCID: PMC8574000 DOI: 10.1186/s12866-021-02370-4] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Accepted: 10/27/2021] [Indexed: 11/16/2022] Open
Abstract
Background Microbe-microbe interactions between members of the plant rhizosphere are important but remain poorly understood. A more comprehensive understanding of the molecular mechanisms used by microbes to cooperate, compete, and persist has been challenging because of the complexity of natural ecosystems and the limited control over environmental factors. One strategy to address this challenge relies on studying complexity in a progressive manner, by first building a detailed understanding of relatively simple subsets of the community and then achieving high predictive power through combining different building blocks (e.g., hosts, community members) for different environments. Herein, we coupled this reductionist approach with high-resolution mass spectrometry-based metaproteomics to study molecular mechanisms driving community assembly, adaptation, and functionality for a defined community of ten taxonomically diverse bacterial members of Populus deltoides rhizosphere co-cultured either in a complex or defined medium. Results Metaproteomics showed this defined community assembled into distinct microbiomes based on growth media that eventually exhibit composition and functional stability over time. The community grown in two different media showed variation in composition, yet both were dominated by only a few microbial strains. Proteome-wide interrogation provided detailed insights into the functional behavior of each dominant member as they adjust to changing community compositions and environments. The emergence and persistence of select microbes in these communities were driven by specialization in strategies including motility, antibiotic production, altered metabolism, and dormancy. Protein-level interrogation identified post-translational modifications that provided additional insights into regulatory mechanisms influencing microbial adaptation in the changing environments. Conclusions This study provides high-resolution proteome-level insights into our understanding of microbe-microbe interactions and highlights specialized biological processes carried out by specific members of assembled microbiomes to compete and persist in changing environmental conditions. Emergent properties observed in these lower complexity communities can then be re-evaluated as more complex systems are studied and, when a particular property becomes less relevant, higher-order interactions can be identified. Supplementary Information The online version contains supplementary material available at 10.1186/s12866-021-02370-4.
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Affiliation(s)
- Him K Shrestha
- Biosciences Division, Oak Ridge National Laboratory, 37831, Oak Ridge, Tennessee, United States.,Department of Genome Science and Technology, University of Tennessee-Knoxville, 37996, Knoxville, Tennessee, United States
| | - Manasa R Appidi
- Biosciences Division, Oak Ridge National Laboratory, 37831, Oak Ridge, Tennessee, United States.,Department of Genome Science and Technology, University of Tennessee-Knoxville, 37996, Knoxville, Tennessee, United States
| | | | - Jia Wang
- Biosciences Division, Oak Ridge National Laboratory, 37831, Oak Ridge, Tennessee, United States
| | - Dana L Carper
- Biosciences Division, Oak Ridge National Laboratory, 37831, Oak Ridge, Tennessee, United States
| | - Leah Burdick
- Biosciences Division, Oak Ridge National Laboratory, 37831, Oak Ridge, Tennessee, United States
| | - Dale A Pelletier
- Biosciences Division, Oak Ridge National Laboratory, 37831, Oak Ridge, Tennessee, United States
| | - Mitchel J Doktycz
- Biosciences Division, Oak Ridge National Laboratory, 37831, Oak Ridge, Tennessee, United States
| | - Robert L Hettich
- Biosciences Division, Oak Ridge National Laboratory, 37831, Oak Ridge, Tennessee, United States
| | - Paul E Abraham
- Biosciences Division, Oak Ridge National Laboratory, 37831, Oak Ridge, Tennessee, United States.
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Minchev Z, Kostenko O, Soler R, Pozo MJ. Microbial Consortia for Effective Biocontrol of Root and Foliar Diseases in Tomato. FRONTIERS IN PLANT SCIENCE 2021; 12:756368. [PMID: 34804094 PMCID: PMC8602810 DOI: 10.3389/fpls.2021.756368] [Citation(s) in RCA: 26] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2021] [Accepted: 10/04/2021] [Indexed: 05/26/2023]
Abstract
The use of beneficial microorganisms for the biological control of plant diseases and pests has emerged as a viable alternative to chemical pesticides in agriculture. Traditionally, microbe-based biocontrol strategies for crop protection relied on the application of single microorganisms. However, the design of microbial consortia for improving the reliability of current biological control practices is now a major trend in biotechnology, and it is already being exploited commercially in the context of sustainable agriculture. In the present study, exploiting the microbial library of the biocontrol company Koppert Biological Systems, we designed microbial consortia composed of carefully selected, well-characterized beneficial bacteria and fungi displaying diverse biocontrol modes of action. We compared their ability to control shoot and root pathogens when applied separately or in combination as microbial consortia, and across different application strategies that imply direct microbial antagonism or induced systemic plant resistance. We hypothesized that consortia will be more versatile than the single strains, displaying an extended functionality, as they will be able to control a wider range of plant diseases through diverse mechanisms and application methods. Our results confirmed our hypothesis, revealing that while different individual microorganisms were the most effective in controlling the root pathogen Fusarium oxysporum or the foliar pathogen Botrytis cinerea in tomato, the consortia showed an extended functionality, effectively controlling both pathogens under any of the application schemes, always reaching the same protection levels as the best performing single strains. Our findings illustrate the potential of microbial consortia, composed of carefully selected and compatible beneficial microorganisms, including bacteria and fungi, for the development of stable and versatile biological control products for plant protection against a wider range of diseases.
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Affiliation(s)
- Zhivko Minchev
- Business Unit Microbiology, Agronomical Development Department, Koppert Biological Systems, Berkel en Rodenrijs, Netherlands
| | - Olga Kostenko
- Business Unit Microbiology, Agronomical Development Department, Koppert Biological Systems, Berkel en Rodenrijs, Netherlands
| | - Roxina Soler
- Business Unit Microbiology, Agronomical Development Department, Koppert Biological Systems, Berkel en Rodenrijs, Netherlands
| | - María J. Pozo
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín, CSIC, Granada, Spain
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Dabré ÉE, Lee SJ, Hijri M, Favret C. The effects of mycorrhizal colonization on phytophagous insects and their natural enemies in soybean fields. PLoS One 2021; 16:e0257712. [PMID: 34551014 PMCID: PMC8457447 DOI: 10.1371/journal.pone.0257712] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2020] [Accepted: 09/08/2021] [Indexed: 11/29/2022] Open
Abstract
The use of belowground microorganisms in agriculture, with the aim to stimulate plant growth and improve crop yields, has recently gained interest. However, few studies have examined the effects of microorganism inoculation on higher trophic levels in natural conditions. We examined how the diversity of phytophagous insects and their natural enemies responded to the field-inoculation of soybean with a model arbuscular mycorrhizal fungus (AMF), Rhizophagus irregularis, combined with a nitrogen-fixing bacterium, Bradyrhizobium japonicum, and a plant growth-promoting bacterium, Bacillus pumilus. We also investigate if the absence or presence of potassium fertilizer can affect this interaction. We found an increase in the abundance of piercing-sucking insects with the triple inoculant irrespective of potassium treatment, whereas there were no differences among treatments for other insect groups. A decrease in the abundance of the soybean aphid, Aphis glycines, with the double inoculant Rhizophagus + Bradyrhizobium was observed in potassium enriched plots and in the abundance of Empoasca spp. with potassium treatment independent of inoculation type. Although it was not possible to discriminate the mycorrhization realized by inoculum from that of the indigenous AMF in the field, we confirmed global negative effects of overall mycorrhizal colonization on the abundance of phytophagous piercing-sucking insects, phytophagous chewing insects, and the alpha diversity of phytophagous insects. In perspective, the use of AMF/Rhizobacteria inoculants in the field should focus on the identity and performance of strains to better understand their impact on insects.
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Affiliation(s)
- Élisée Emmanuel Dabré
- Department of Biological Sciences, Biodiversity Centre, Plant Biology Research Institute, University of Montreal, Montréal, Québec, Canada
| | - Soon-Jae Lee
- Department of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland
| | - Mohamed Hijri
- Department of Biological Sciences, Biodiversity Centre, Plant Biology Research Institute, University of Montreal, Montréal, Québec, Canada
- AgroBioSciences, Mohammed VI Polytechnic University (UM6P), Ben Guerir, Morocco
| | - Colin Favret
- Department of Biological Sciences, Biodiversity Centre, Plant Biology Research Institute, University of Montreal, Montréal, Québec, Canada
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Song HS, Whon TW, Kim J, Lee SH, Kim JY, Kim YB, Choi HJ, Rhee JK, Roh SW. Microbial niches in raw ingredients determine microbial community assembly during kimchi fermentation. Food Chem 2020; 318:126481. [PMID: 32126467 DOI: 10.1016/j.foodchem.2020.126481] [Citation(s) in RCA: 51] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2019] [Revised: 01/20/2020] [Accepted: 02/23/2020] [Indexed: 12/11/2022]
Abstract
Fermented foods constitute hubs of microbial consortia differentially affecting nutritional and organoleptic properties, quality, and safety. Here we show the origin source of fermentative microbes and fermentation dynamics of kimchi. We partitioned microbiota by raw ingredient (kimchi cabbage, garlic, ginger, and red pepper) to render kimchi fermented by each source-originated microbe pool and applied multi-omics (metataxonomics and metabolomics), bacterial viability, and physiochemical analyses to longitudinally collected samples. Only kimchi cabbage- and garlic-derived microbial inoculums yielded successful kimchi fermentations. The dominant fermentative microbial taxa and subsequent metabolic outputs differed by raw ingredient type: the genus Leuconostoc, Weissella, and Lactobacillus for all non-sterilized ingredients, garlic, and kimchi cabbage, respectively. Gnotobiotic kimchi inoculated by mono-, di-, and tri- isolated fermentative microbe combinations further revealed W. koreensis-mediated reversible microbial metabolic outputs. The results suggest that the raw ingredient microbial habitat niches selectively affect microbial community assembly patterns and processes during kimchi fermentation.
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Affiliation(s)
- Hye Seon Song
- Microbiology and Functionality Research Group, World Institute of Kimchi, Gwangju 61755, Republic of Korea; Department of Food Science and Engineering, Ewha Womans University, Seoul 03760, Republic of Korea
| | - Tae Woong Whon
- Microbiology and Functionality Research Group, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - Juseok Kim
- Microbiology and Functionality Research Group, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - Se Hee Lee
- Microbiology and Functionality Research Group, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - Joon Yong Kim
- Microbiology and Functionality Research Group, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - Yeon Bee Kim
- Microbiology and Functionality Research Group, World Institute of Kimchi, Gwangju 61755, Republic of Korea; Department of Food Science and Engineering, Ewha Womans University, Seoul 03760, Republic of Korea
| | - Hak-Jong Choi
- Microbiology and Functionality Research Group, World Institute of Kimchi, Gwangju 61755, Republic of Korea
| | - Jin-Kyu Rhee
- Department of Food Science and Engineering, Ewha Womans University, Seoul 03760, Republic of Korea
| | - Seong Woon Roh
- Microbiology and Functionality Research Group, World Institute of Kimchi, Gwangju 61755, Republic of Korea.
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10
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Jafarbeigi F, Samih MA, Alaei H, Shirani H. Induced Tomato Resistance Against Bemisia tabaci Triggered by Salicylic Acid, β-Aminobutyric Acid, and Trichoderma. NEOTROPICAL ENTOMOLOGY 2020; 49:456-467. [PMID: 32361943 DOI: 10.1007/s13744-020-00771-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2019] [Accepted: 03/10/2020] [Indexed: 06/11/2023]
Abstract
Bemisia tabaci Gennadius (Hemiptera: Aleyrodidae) biotype B is a key pest of Solanum lycopersicum L. (Solanaceae) throughout the world. In this study, we examined the induction of resistance on tomato plants treated with SA, BABA, and Trichoderma either individually or in combination against B. tabaci biotype B through the assessment of some biological and behavioral aspects of this insect pest. Also, to understand the mode of action of these inducers, we correlated and analyzed the biochemical basis of plant resistance, by measuring levels of polyphenol oxidase (PPO), peroxidase (POD), phenylalanine ammonia lyase (PAL), and phenolic content in leaves of treated tomato plants. The longest development time of whitefly immature stages was recorded for plants treated with root β-aminobutyric acid application (RBABA) + root Trichoderma application (RT), root salicylic acid application (RSA) + RT, and RT. In a free-choice assay, B. tabaci adults showed a significantly lower preference for settling and oviposition in RBABA + RT, RSA + RT, and RT in comparison with control. In a no-choice assay, B. tabaci females laid significantly fewer eggs on treatments than those in control, with better results observed in RBABA + RT. Plants responded to different treatments and showed higher induction of PPO, POD, and PAL activities, besides the higher accumulation of phenols in RBABA + RT, RSA + RT, and RT treatments. These results suggest that RBABA + RT, RSA + RT, and RT could be utilized for the induction of effective plant defense against B. tabaci.
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Affiliation(s)
- F Jafarbeigi
- Dept of Plant Protection, Faculty of Agriculture, Vali-e-Asr Univ of Rafsanjan, Rafsanjan, Iran.
| | - M A Samih
- Dept of Plant Protection, Faculty of Agriculture, Vali-e-Asr Univ of Rafsanjan, Rafsanjan, Iran
| | - H Alaei
- Dept of Plant Protection, Faculty of Agriculture, Vali-e-Asr Univ of Rafsanjan, Rafsanjan, Iran
| | - H Shirani
- Dept of Soil Science, Faculty of Agriculture, Vali-e-Asr Univ of Rafsanjan, Rafsanjan, Iran
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11
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Coppola M, Diretto G, Digilio MC, Woo SL, Giuliano G, Molisso D, Pennacchio F, Lorito M, Rao R. Transcriptome and Metabolome Reprogramming in Tomato Plants by Trichoderma harzianum strain T22 Primes and Enhances Defense Responses Against Aphids. Front Physiol 2019; 10:745. [PMID: 31293434 PMCID: PMC6599157 DOI: 10.3389/fphys.2019.00745] [Citation(s) in RCA: 70] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2019] [Accepted: 05/31/2019] [Indexed: 12/02/2022] Open
Abstract
Beneficial fungi in the genus Trichoderma are among the most widespread biocontrol agents of plant pathogens. Their role in triggering plant defenses against pathogens has been intensely investigated, while, in contrast, very limited information is available on induced barriers active against insects. The growing experimental evidence on this latter topic looks promising, and paves the way toward the development of Trichoderma strains and/or consortia active against multiple targets. However, the predictability and reproducibility of the effects that these beneficial fungi is still somewhat limited by the lack of an in-depth understanding of the molecular mechanisms underlying the specificity of their interaction with different crop varieties, and on how the environmental factors modulate this interaction. To fill this research gap, here we studied the transcriptome changes in tomato plants (cultivar "Dwarf San Marzano") induced by Trichoderma harzianum (strain T22) colonization and subsequent infestation by the aphid Macrosiphum euphorbiae. A wide transcriptome reprogramming, related to metabolic processes, regulation of gene expression and defense responses, was induced both by separate experimental treatments, which showed a synergistic interaction when concurrently applied. The most evident expression changes of defense genes were associated with the multitrophic interaction Trichoderma-tomato-aphid. Early and late genes involved in direct defense against insects were induced (i.e., peroxidase, GST, kinases and polyphenol oxidase, miraculin, chitinase), along with indirect defense genes, such as sesquiterpene synthase and geranylgeranyl phosphate synthase. Targeted and untargeted semi-polar metabolome analysis revealed a wide metabolome alteration showing an increased accumulation of isoprenoids in Trichoderma treated plants. The wide array of transcriptomic and metabolomics changes nicely fit with the higher mortality of aphids when feeding on Trichoderma treated plants, herein reported, and with the previously observed attractiveness of these latter toward the aphid parasitoid Aphidius ervi. Moreover, Trichoderma treated plants showed the over-expression of transcripts coding for several families of defense-related transcription factors (bZIP, MYB, NAC, AP2-ERF, WRKY), suggesting that the fungus contributes to the priming of plant responses against pest insects. Collectively, our data indicate that Trichoderma treatment of tomato plants induces transcriptomic and metabolomic changes, which underpin both direct and indirect defense responses.
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Affiliation(s)
| | | | - Maria Cristina Digilio
- Department of Agricultural Sciences, Portici, Italy
- Task Force on Microbiome Studies, University of Naples Federico II, Naples, Italy
| | - Sheridan Lois Woo
- Task Force on Microbiome Studies, University of Naples Federico II, Naples, Italy
- Department of Pharmacy, University of Naples Federico II, Naples, Italy
- National Research Council, Institute for Sustainable Plant Protection, Portici, Italy
| | | | | | - Francesco Pennacchio
- Task Force on Microbiome Studies, University of Naples Federico II, Naples, Italy
- Department of Pharmacy, University of Naples Federico II, Naples, Italy
| | - Matteo Lorito
- Department of Agricultural Sciences, Portici, Italy
- Task Force on Microbiome Studies, University of Naples Federico II, Naples, Italy
- National Research Council, Institute for Sustainable Plant Protection, Portici, Italy
| | - Rosa Rao
- Department of Agricultural Sciences, Portici, Italy
- Task Force on Microbiome Studies, University of Naples Federico II, Naples, Italy
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12
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Gadhave KR, Gange AC. Interactions Involving Rhizobacteria and Foliar-Feeding Insects. ACTA ACUST UNITED AC 2018. [DOI: 10.1007/978-3-319-91614-9_6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/15/2023]
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13
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Ramirez KS, Geisen S, Morriën E, Snoek BL, van der Putten WH. Network Analyses Can Advance Above-Belowground Ecology. TRENDS IN PLANT SCIENCE 2018; 23:759-768. [PMID: 30072227 DOI: 10.1016/j.tplants.2018.06.009] [Citation(s) in RCA: 38] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2018] [Revised: 06/05/2018] [Accepted: 06/17/2018] [Indexed: 06/08/2023]
Abstract
An understanding of above-belowground (AG-BG) ecology is important for evaluating how plant interactions with enemies, symbionts, and decomposers affect species diversity and will respond to global changes. However, research questions and experiments often focus on only a limited number of interactions, creating an incomplete picture of how entire communities may be involved in AG-BG community ecology. Therefore, a pressing challenge is to formulate hypotheses of AG-BG interactions when considering communities in their full complexity. Here we discuss how network analyses can be a powerful tool to progress AG-BG research, link across scales from individual to community and ecosystem, visualize community interactions between the two (AG and BG) subsystems, and develop testable hypotheses.
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Affiliation(s)
- Kelly S Ramirez
- Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), P.O. Box 50, 6700 AB, Wageningen, The Netherlands.
| | - Stefan Geisen
- Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), P.O. Box 50, 6700 AB, Wageningen, The Netherlands; Laboratory of Nematology, Wageningen University, P.O. Box 8123, 6700 ES, Wageningen, The Netherlands
| | - Elly Morriën
- Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), P.O. Box 50, 6700 AB, Wageningen, The Netherlands; Institute of Biodiversity and Ecosystem Dynamics, Department of Ecosystem and Landscape Dynamics (IBED-ELD), University of Amsterdam, P.O. Box 94248, 1090 GE Amsterdam, The Netherlands
| | - Basten L Snoek
- Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), P.O. Box 50, 6700 AB, Wageningen, The Netherlands; Laboratory of Nematology, Wageningen University, P.O. Box 8123, 6700 ES, Wageningen, The Netherlands; Theoretical Biology and Bioinformatics, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands
| | - Wim H van der Putten
- Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), P.O. Box 50, 6700 AB, Wageningen, The Netherlands; Laboratory of Nematology, Wageningen University, P.O. Box 8123, 6700 ES, Wageningen, The Netherlands
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14
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Cregger MA, Veach AM, Yang ZK, Crouch MJ, Vilgalys R, Tuskan GA, Schadt CW. The Populus holobiont: dissecting the effects of plant niches and genotype on the microbiome. MICROBIOME 2018; 6:31. [PMID: 29433554 PMCID: PMC5810025 DOI: 10.1186/s40168-018-0413-8] [Citation(s) in RCA: 190] [Impact Index Per Article: 31.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/28/2017] [Accepted: 01/23/2018] [Indexed: 05/19/2023]
Abstract
BACKGROUND Microorganisms serve important functions within numerous eukaryotic host organisms. An understanding of the variation in the plant niche-level microbiome, from rhizosphere soils to plant canopies, is imperative to gain a better understanding of how both the structural and functional processes of microbiomes impact the health of the overall plant holobiome. Using Populus trees as a model ecosystem, we characterized the archaeal/bacterial and fungal microbiome across 30 different tissue-level niches within replicated Populus deltoides and hybrid Populus trichocarpa × deltoides individuals using 16S and ITS2 rRNA gene analyses. RESULTS Our analyses indicate that archaeal/bacterial and fungal microbiomes varied primarily across broader plant habitat classes (leaves, stems, roots, soils) regardless of plant genotype, except for fungal communities within leaf niches, which were greatly impacted by the host genotype. Differences between tree genotypes are evident in the elevated presence of two potential fungal pathogens, Marssonina brunnea and Septoria sp., on hybrid P. trichocarpa × deltoides trees which may in turn be contributing to divergence in overall microbiome composition. Archaeal/bacterial diversity increased from leaves, to stem, to root, and to soil habitats, whereas fungal diversity was the greatest in stems and soils. CONCLUSIONS This study provides a holistic understanding of microbiome structure within a bioenergy relevant plant host, one of the most complete niche-level analyses of any plant. As such, it constitutes a detailed atlas or map for further hypothesis testing on the significance of individual microbial taxa within specific niches and habitats of Populus and a baseline for comparisons to other plant species.
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Affiliation(s)
- M A Cregger
- Biosciences Division, Oak Ridge National Laboratory, 1 Bethel Valley Rd, Oak Ridge, TN, 37831, USA
| | - A M Veach
- Biosciences Division, Oak Ridge National Laboratory, 1 Bethel Valley Rd, Oak Ridge, TN, 37831, USA
| | - Z K Yang
- Biosciences Division, Oak Ridge National Laboratory, 1 Bethel Valley Rd, Oak Ridge, TN, 37831, USA
| | - M J Crouch
- Biosciences Division, Oak Ridge National Laboratory, 1 Bethel Valley Rd, Oak Ridge, TN, 37831, USA
- Present address: Department of Biochemistry & Molecular Biology, Brody School of Medicine, East Carolina Diabetes & Obesity Institute, East Carolina University, Greenville, NC, USA
| | - R Vilgalys
- Biology Department, Duke University, 130 Science Drive, Durham, NC, 27708, USA
| | - G A Tuskan
- Biosciences Division, Oak Ridge National Laboratory, 1 Bethel Valley Rd, Oak Ridge, TN, 37831, USA
| | - C W Schadt
- Biosciences Division, Oak Ridge National Laboratory, 1 Bethel Valley Rd, Oak Ridge, TN, 37831, USA.
- Microbiology Department, University of Tennessee, M409 Walters Life Sciences, Knoxville, TN, 37996, USA.
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15
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Sergaki C, Lagunas B, Lidbury I, Gifford ML, Schäfer P. Challenges and Approaches in Microbiome Research: From Fundamental to Applied. FRONTIERS IN PLANT SCIENCE 2018; 9:1205. [PMID: 30174681 PMCID: PMC6107787 DOI: 10.3389/fpls.2018.01205] [Citation(s) in RCA: 67] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2018] [Accepted: 07/26/2018] [Indexed: 05/07/2023]
Abstract
We face major agricultural challenges that remain a threat for global food security. Soil microbes harbor enormous potentials to provide sustainable and economically favorable solutions that could introduce novel approaches to improve agricultural practices and, hence, crop productivity. In this review we give an overview regarding the current state-of-the-art of microbiome research by discussing new technologies and approaches. We also provide insights into fundamental microbiome research that aim to provide a deeper understanding of the dynamics within microbial communities, as well as their interactions with different plant hosts and the environment. We aim to connect all these approaches with potential applications and reflect how we can use microbial communities in modern agricultural systems to realize a more customized and sustainable use of valuable resources (e.g., soil).
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Affiliation(s)
- Chrysi Sergaki
- School of Life Sciences, University of Warwick, Coventry, United Kingdom
- *Correspondence: Chrysi Sergaki,
| | - Beatriz Lagunas
- School of Life Sciences, University of Warwick, Coventry, United Kingdom
| | - Ian Lidbury
- School of Life Sciences, University of Warwick, Coventry, United Kingdom
| | - Miriam L. Gifford
- School of Life Sciences, University of Warwick, Coventry, United Kingdom
- Warwick Integrative Synthetic Biology Centre, University of Warwick, Coventry, United Kingdom
| | - Patrick Schäfer
- School of Life Sciences, University of Warwick, Coventry, United Kingdom
- Warwick Integrative Synthetic Biology Centre, University of Warwick, Coventry, United Kingdom
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16
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Rasmann S, Bennett A, Biere A, Karley A, Guerrieri E. Root symbionts: Powerful drivers of plant above- and belowground indirect defenses. INSECT SCIENCE 2017; 24:947-960. [PMID: 28374534 DOI: 10.1111/1744-7917.12464] [Citation(s) in RCA: 48] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2016] [Revised: 03/08/2017] [Accepted: 03/15/2017] [Indexed: 05/04/2023]
Abstract
Soil microbial mutualists of plants, including mycorrhizal fungi, non-mycorrhizal fungi and plant growth promoting rhizobacteria, have been typically characterized for increasing nutrient acquisition and plant growth. More recently, soil microbes have also been shown to increase direct plant defense against above- and belowground herbivores. Plants, however, do not only rely on direct defenses when attacked, but they can also recruit pest antagonists such as predators and parasitoids, both above and belowground, mainly via the release of volatile organic compounds (i.e., indirect defenses). In this review, we illustrate the main features and effects of soil microbial mutualists of plants on plant indirect defenses and discuss possible applications within the framework of sustainable crop protection against root- and shoot-feeding arthropod pests. We indicate the main knowledge gaps and the future challenges to be addressed in the study and application of these multifaceted interactions.
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Affiliation(s)
- Sergio Rasmann
- Institute of Biology, University of Neuchâtel, Neuchâtel, Switzerland
| | - Alison Bennett
- Department of Ecological Sciences, James Hutton Institute, Dundee, UK
| | - Arjen Biere
- Netherlands Institute of Ecology, Wageningen, the Netherlands
| | - Alison Karley
- Department of Ecological Sciences, James Hutton Institute, Dundee, UK
| | - Emilio Guerrieri
- Institute for Sustainable Plant Protection, National Research Council of Italy, Portici, Italy
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17
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Coppola M, Cascone P, Chiusano ML, Colantuono C, Lorito M, Pennacchio F, Rao R, Woo SL, Guerrieri E, Digilio MC. Trichoderma harzianum enhances tomato indirect defense against aphids. INSECT SCIENCE 2017; 24:1025-1033. [PMID: 28475289 DOI: 10.1111/1744-7917.12475] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2016] [Revised: 04/24/2017] [Accepted: 04/25/2017] [Indexed: 05/05/2023]
Abstract
Many fungal root symbionts of the genus Trichoderma are well-known for their beneficial effects on agronomic performance and protection against plant pathogens; moreover, they may enhance protection from insect pests, by triggering plant resistance mechanisms. Defense barriers against insects are induced by the activation of metabolic pathways involved in the production of defense-related plant compounds, either directly active against herbivore insects, or exerting an indirect effect, by increasing the attraction of herbivore natural enemies. In a model system composed of the tomato plant, the aphid Macrosiphum euphorbiae and the parasitoid Aphidius ervi, plant metabolic changes induced by Trichoderma harzianum and their effects on higher trophic levels have been assessed. T. harzianum T22 treatments induce a primed state that upon aphid attacks leads to an increased attraction of aphid parasitoids, mediated by the enhanced production of volatile organic compounds (VOCs) that are known to induce Aphidius ervi flight. Transcriptome sequencing of T22-treated plants infested by aphids showed a remarkable upregulation of genes involved in terpenoids biosynthesis and salicylic acid pathway, which are consistent with the observed flight response of A. ervi and the VOC bouquet profile underlying this behavioral response.
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Affiliation(s)
- Mariangela Coppola
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy
| | | | - Maria Luisa Chiusano
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy
| | - Chiara Colantuono
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy
| | - Matteo Lorito
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy
| | - Francesco Pennacchio
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy
| | - Rosa Rao
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy
| | - Sheridan Lois Woo
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy
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18
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Tonelli ML, Magallanes-Noguera C, Fabra A. Symbiotic performance and induction of systemic resistance against Cercospora sojina in soybean plants co-inoculated with Bacillus sp. CHEP5 and Bradyrhizobium japonicum E109. Arch Microbiol 2017; 199:1283-1291. [PMID: 28643122 DOI: 10.1007/s00203-017-1401-2] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2016] [Revised: 06/09/2017] [Accepted: 06/14/2017] [Indexed: 10/19/2022]
Abstract
Soybean is an economically very important crop throughout the word and particularly in Argentina. Soybean yield may be affected by many factors such as the lack of some essential nutrients or pathogens attack. In this work we demonstrated that the co-inoculation of the native biocontrol bacterium Bacillus sp. CHEP5 which induces resistance against Cercospora sojina in soybean and the nitrogen fixing strain Bradyrhizobium japonicum E109, was more effective in reducing frog leaf spot severity than the inoculation of the biocontrol agent alone. Probably, this is related with the increase in the ability to form biofilm when both bacteria are growing together. Furthermore, Bacillus sp. CHEP5 inoculation did not affect Bradyrhizobium japonicum E109 symbiotic behavior and flavonoids composition of root exudates in pathogen challenged plants. These results suggest that co-inoculation of plants with rhizobia and biocontrol agents could be a strategy to improve soybean production in a sustainable system.
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Affiliation(s)
- María Laura Tonelli
- Departamento de Ciencias Naturales, Facultad de Ciencias Exactas, Físico-Químicas y Naturales, Universidad Nacional de Río Cuarto, Agencia Postal 3, 5800, Río Cuarto, Córdoba, Argentina.
| | - C Magallanes-Noguera
- Departamento de Ciencias Naturales, Facultad de Ciencias Exactas, Físico-Químicas y Naturales, Universidad Nacional de Río Cuarto, Agencia Postal 3, 5800, Río Cuarto, Córdoba, Argentina
| | - A Fabra
- Departamento de Ciencias Naturales, Facultad de Ciencias Exactas, Físico-Químicas y Naturales, Universidad Nacional de Río Cuarto, Agencia Postal 3, 5800, Río Cuarto, Córdoba, Argentina
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19
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Xiao Z, Wang X, Koricheva J, Kergunteuil A, Le Bayon R, Liu M, Hu F, Rasmann S. Earthworms affect plant growth and resistance against herbivores: A meta‐analysis. Funct Ecol 2017. [DOI: 10.1111/1365-2435.12969] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Zhenggao Xiao
- Soil Ecology LabCollege of Resources and Environmental SciencesNanjing Agricultural University Nanjing China
- Institute of BiologyUniversity of Neuchâtel Neuchatel Switzerland
| | - Xie Wang
- Soil and Fertilizer Research InstituteSichuan Academy of Agricultural Sciences Chengdu China
| | - Julia Koricheva
- School of Biological SciencesRoyal Holloway University of London Egham UK
| | - Alan Kergunteuil
- Institute of BiologyUniversity of Neuchâtel Neuchatel Switzerland
| | | | - Manqiang Liu
- Soil Ecology LabCollege of Resources and Environmental SciencesNanjing Agricultural University Nanjing China
- Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization Nanjing China
| | - Feng Hu
- Soil Ecology LabCollege of Resources and Environmental SciencesNanjing Agricultural University Nanjing China
- Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization Nanjing China
| | - Sergio Rasmann
- Institute of BiologyUniversity of Neuchâtel Neuchatel Switzerland
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20
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Shikano I, Rosa C, Tan CW, Felton GW. Tritrophic Interactions: Microbe-Mediated Plant Effects on Insect Herbivores. ANNUAL REVIEW OF PHYTOPATHOLOGY 2017; 55:313-331. [PMID: 28590879 DOI: 10.1146/annurev-phyto-080516-035319] [Citation(s) in RCA: 105] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
Abstract
It is becoming abundantly clear that the microbes associated with plants and insects can profoundly influence plant-insect interactions. Here, we focus on recent findings and propose directions for future research that involve microbe-induced changes to plant defenses and nutritive quality as well as the consequences of these changes for the behavior and fitness of insect herbivores. Insect (herbivore and parasitoid)-associated microbes can favor or improve insect fitness by suppressing plant defenses and detoxifying defensive phytochemicals. Phytopathogens can influence or manipulate insect behavior and fitness by altering plant quality and defense. Plant-beneficial microbes can promote plant growth and influence plant nutritional and phytochemical composition that can positively or negatively influence insect fitness. Lastly, we suggest that entomopathogens have the potential to influence plant defenses directly as endophytes or indirectly by altering insect physiology.
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Affiliation(s)
- Ikkei Shikano
- Department of Entomology and Center for Chemical Ecology, Pennsylvania State University, University Park, Pennsylvania 16802;
| | - Cristina Rosa
- Department of Plant Pathology and Environmental Microbiology, Pennsylvania State University, University Park, Pennsylvania 16802
| | - Ching-Wen Tan
- Department of Entomology and Center for Chemical Ecology, Pennsylvania State University, University Park, Pennsylvania 16802;
| | - Gary W Felton
- Department of Entomology and Center for Chemical Ecology, Pennsylvania State University, University Park, Pennsylvania 16802;
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21
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Benítez E, Paredes D, Rodríguez E, Aldana D, González M, Nogales R, Campos M, Moreno B. Bottom-up effects on herbivore-induced plant defences: a case study based on compositional patterns of rhizosphere microbial communities. Sci Rep 2017; 7:6251. [PMID: 28740172 PMCID: PMC5524984 DOI: 10.1038/s41598-017-06714-x] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2016] [Accepted: 06/16/2017] [Indexed: 11/21/2022] Open
Abstract
Below-ground soil microorganisms can modulate above-ground plant-insect interactions. It still needs to be determined whether this is a direct effect of single species or an indirect effect of shifts in soil microbial community assemblages. Evaluation of the soil microbiome as a whole is critical for understanding multi-trophic interactions, including those mediated by volatiles involving plants, herbivorous insects, predators/parasitoids and microorganisms. We implemented a regulated system comprising Nerium oleander plants grown in soil initially containing a sterile/non sterile inoculum, herbivore Aphis nerii and predator Chrysoperla carnea. After aphid attack, plants emitted a characteristic blend of volatiles derived from two biosynthetic classes: fatty acid catabolites and aromatic-derived products. Three aliphatic compounds were mainly detected in plants grown in the inoculated microbial soil, a blend which was preferentially chosen by C. carnea adult females. The contrasting effect of the initial inocula was attributed to the different microbial consortia developed in each treatment. We argue that differences in the relative abundance of the active microbial communities in the rhizosphere correlate with those in the emission of selected volatile compounds by attacked plants. The mechanisms involved in how the functional soil microbiome modulates inducible indirect defence of plants are discussed.
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Affiliation(s)
- Emilio Benítez
- Estación Experimental del Zaidín (EEZ), CSIC, 18008, Granada, Spain.
| | - Daniel Paredes
- Estación Experimental del Zaidín (EEZ), CSIC, 18008, Granada, Spain
| | - Estefanía Rodríguez
- Instituto de Investigación y Formación Agraria y Pesquera, Centro IFAPA La Mojonera, Almería, Spain
| | - Diana Aldana
- Estación Experimental del Zaidín (EEZ), CSIC, 18008, Granada, Spain
| | - Mónica González
- Estación Experimental Las Palmerillas, Cajamar, Almería, Spain
| | - Rogelio Nogales
- Estación Experimental del Zaidín (EEZ), CSIC, 18008, Granada, Spain
| | - Mercedes Campos
- Estación Experimental del Zaidín (EEZ), CSIC, 18008, Granada, Spain
| | - Beatriz Moreno
- Estación Experimental del Zaidín (EEZ), CSIC, 18008, Granada, Spain
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22
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López-Ráez JA, Shirasu K, Foo E. Strigolactones in Plant Interactions with Beneficial and Detrimental Organisms: The Yin and Yang. TRENDS IN PLANT SCIENCE 2017; 22:527-537. [PMID: 28400173 DOI: 10.1016/j.tplants.2017.03.011] [Citation(s) in RCA: 51] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2016] [Revised: 03/13/2017] [Accepted: 03/20/2017] [Indexed: 05/20/2023]
Abstract
Strigolactones (SLs) are plant hormones that have important roles as modulators of plant development. They were originally described as ex planta signaling molecules in the rhizosphere that induce the germination of parasitic plants, a role that was later linked to encouraging the beneficial symbiosis with arbuscular mycorrhizal (AM) fungi. Recently, the focus has shifted to examining the role of SLs in plant-microbe interactions, and has revealed roles for SLs in the association of legumes with nitrogen-fixing rhizobacteria and in interactions with disease-causing pathogens. Here, we examine the role of SLs in plant interactions with beneficial and detrimental organisms, and propose possible future biotechnological applications.
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Affiliation(s)
- Juan A López-Ráez
- Department of Soil Microbiology and Symbiotic Systems, Estación Experimental del Zaidín-Consejo Superior de Investigaciones Científicas (EEZ-CSIC), Profesor Albareda 1, Granada 18008, Spain.
| | - Ken Shirasu
- RIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan
| | - Eloise Foo
- School of Biological Sciences, University of Tasmania, Hobart, Tasmania 7001, Australia
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Clavijo McCormick A. Can plant-natural enemy communication withstand disruption by biotic and abiotic factors? Ecol Evol 2016; 6:8569-8582. [PMID: 28031808 PMCID: PMC5167045 DOI: 10.1002/ece3.2567] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2016] [Revised: 09/29/2016] [Accepted: 10/01/2016] [Indexed: 12/24/2022] Open
Abstract
The attraction of natural enemies towards herbivore-induced plant volatiles is a well-documented phenomenon. However, the majority of published studies are carried under optimal water and nutrient regimes and with just one herbivore. But what happens when additional levels of ecological complexity are added? Does the presence of a second herbivore, microorganisms, and abiotic stress interfere with plant-natural enemy communication? or is communication stable enough to withstand disruption by additional biotic and abiotic factors?Investigating the effects of these additional levels of ecological complexity is key to understanding the stability of tritrophic interactions in natural ecosystems and may aid to forecast the impact of environmental disturbances on these, especially in climate change scenarios, which are often associated with modifications in plant and arthropod species distribution and increased levels of abiotic stress.This review explores the literature on natural enemy attraction to herbivore-induced volatiles when, besides herbivory, plants are challenged by additional biotic and abiotic factors.The aim of this review was to establish the impact of different biotic and abiotic factors on plant-natural enemy communication and to highlight critical aspects to guide future research efforts.
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