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Pandiselvam R, Aydar AY, Aksoylu Özbek Z, Sözeri Atik D, Süfer Ö, Taşkin B, Olum E, Ramniwas S, Rustagi S, Cozzolino D. Farm to fork applications: how vibrational spectroscopy can be used along the whole value chain? Crit Rev Biotechnol 2025; 45:938-981. [PMID: 39494675 DOI: 10.1080/07388551.2024.2409124] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2023] [Revised: 06/28/2024] [Accepted: 08/08/2024] [Indexed: 11/05/2024]
Abstract
Vibrational spectroscopy is a nondestructive analysis technique that depends on the periodic variations in dipole moments and polarizabilities resulting from the molecular vibrations of molecules/atoms. These methods have important advantages over conventional analytical techniques, including (a) their simplicity in terms of implementation and operation, (b) their adaptability to on-line and on-farm applications, (c) making measurement in a few minutes, and (d) the absence of dangerous solvents throughout sample preparation or measurement. Food safety is a concept that requires the assurance that food is free from any physical, chemical, or biological hazards at all stages, from farm to fork. Continuous monitoring should be provided in order to guarantee the safety of the food. Regarding their advantages, vibrational spectroscopic methods, such as Fourier-transform infrared (FTIR), near-infrared (NIR), and Raman spectroscopy, are considered reliable and rapid techniques to track food safety- and food authenticity-related issues throughout the food chain. Furthermore, coupling spectral data with chemometric approaches also enables the discrimination of samples with different kinds of food safety-related hazards. This review deals with the recent application of vibrational spectroscopic techniques to monitor various hazards related to various foods, including crops, fruits, vegetables, milk, dairy products, meat, seafood, and poultry, throughout harvesting, transportation, processing, distribution, and storage.
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Affiliation(s)
- Ravi Pandiselvam
- Physiology, Biochemistry and Post-Harvest Technology Division, ICAR-Central Plantation Crops Research Institute (CPCRI), Kasaragod, India
| | - Alev Yüksel Aydar
- Department of Food Engineering, Manisa Celal Bayar University, Manisa, Türkiye
| | - Zeynep Aksoylu Özbek
- Department of Food Engineering, Manisa Celal Bayar University, Manisa, Türkiye
- Department of Food Science, University of Massachusetts, Amherst, MA, USA
| | - Didem Sözeri Atik
- Department of Food Engineering, Agriculture Faculty, Tekirdağ Namık Kemal University, Tekirdağ, Türkiye
| | - Özge Süfer
- Department of Food Engineering, Faculty of Engineering, Osmaniye Korkut Ata University, Osmaniye, Türkiye
| | - Bilge Taşkin
- Centre DRIFT-FOOD, Faculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences Prague, Suchdol, Prague 6, Czech Republic
| | - Emine Olum
- Department of Gastronomy and Culinary Arts, Faculty of Fine Arts Design and Architecture, Istanbul Medipol University, Istanbul, Türkiye
| | - Seema Ramniwas
- University Centre for Research and Development, University of Biotechnology, Chandigarh University, Gharuan, Mohali, India
| | - Sarvesh Rustagi
- School of Applied and Life sciences, Uttaranchal University, Dehradun, India
| | - Daniel Cozzolino
- Centre for Nutrition and Food Sciences, Queensland Alliance for Agriculture and Food Innovation (QAAFI), The University of Queensland, Brisbane, Australia
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da Silva JGF, Cerqueira IH, Paris Junior JA, da Silva LHD, Colturato VMM, de Abreu Fernandes P, Oliveira TL, Dametto AC, Dias DDS, Ribeiro CA, de Oliveira LFC, da Silva Barud H, Resende FA. Production of biopolymers from watermelon mesocarp: structural characterization, cytogenotoxicological safety, and antioxidant activity. JOURNAL OF FOOD SCIENCE AND TECHNOLOGY 2025; 62:885-896. [PMID: 40182675 PMCID: PMC11961834 DOI: 10.1007/s13197-024-06076-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Revised: 08/07/2024] [Accepted: 08/26/2024] [Indexed: 04/05/2025]
Abstract
This study aimed to produce flexible and optically semi-transparent biopolymers exclusively from watermelon mesocarp. Washed (WM-W) and non-washed (WM-NW) films were obtained hydrothermally, followed by grinding and casting steps, and characterized, targeting correlations among chemical structure, film-forming protocol, cytogenotoxicological safety, and antioxidant activity. The morphological aspects were analyzed using scanning electron microscopy and, according to thermogravimetry measurements, the films are thermally stable with glass transition temperatures determined with differential scanning calorimetry ranging from 12.1 to 77.6 °C for WM-NW and 56.0 °C for WM-W. These differences are probably due to the presence of soluble carbohydrates. The elastic modulus and tensile strength ranged from 88 MPa to 1.1 GPa and from 0.4 MPa to 3.4 MPa, respectively, while the elongation at break decreased from 0.7 to 0.46%. The chemical groups were identified using FTIR and FT-Raman spectroscopy while the crystallinity index (from 10.4 to 50%) was determined with X-ray diffraction. Additionally, the relative water absorption, swelling ratio, water barrier properties, and fluid handling capacity were assessed. WM-NW showed slightly higher cytotoxicity than the WM-W film in cultures of human keratinocytes (HaCat cells). Furthermore, both exhibited antioxidant potential and lacked mutagenic effects, supporting their safe use in diverse value-added applications, particularly in medical devices. Supplementary Information The online version contains supplementary material available at 10.1007/s13197-024-06076-z.
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Affiliation(s)
| | - Igor Henrique Cerqueira
- University of Araraquara (Uniara), Carlos Gomes, 1217, Araraquara, São Paulo, 14.801-340 Brazil
| | | | | | - Vitória Maria Medalha Colturato
- University of Araraquara (Uniara), Carlos Gomes, 1217, Araraquara, São Paulo, 14.801-340 Brazil
- BioSmart Nanotechnology, Araraquara, São Paulo, Brazil
| | | | - Thaís Lourenço Oliveira
- Spectroscopy and Molecular Structure Center, Department of Chemistry, Federal University of Juiz de Fora (UFJF), Juiz de Fora, Minas Gerais Brazil
| | | | - Diógenes dos Santos Dias
- BioSmart Nanotechnology, Araraquara, São Paulo, Brazil
- Institute of Chemistry, São Paulo State University (UNESP), Araraquara, São Paulo, Brazil
| | - Clovis Augusto Ribeiro
- BioSmart Nanotechnology, Araraquara, São Paulo, Brazil
- Institute of Chemistry, São Paulo State University (UNESP), Araraquara, São Paulo, Brazil
| | - Luiz Fernando Cappa de Oliveira
- Spectroscopy and Molecular Structure Center, Department of Chemistry, Federal University of Juiz de Fora (UFJF), Juiz de Fora, Minas Gerais Brazil
| | - Hernane da Silva Barud
- University of Araraquara (Uniara), Carlos Gomes, 1217, Araraquara, São Paulo, 14.801-340 Brazil
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Kolašinac SM, Pećinar I, Gajić R, Mutavdžić D, Dajić Stevanović ZP. Raman Spectroscopy in the Characterization of Food Carotenoids: Challenges and Prospects. Foods 2025; 14:953. [PMID: 40231969 PMCID: PMC11941612 DOI: 10.3390/foods14060953] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2025] [Revised: 02/24/2025] [Accepted: 03/05/2025] [Indexed: 04/16/2025] Open
Abstract
This paper presents an overview of the application of Raman spectroscopy (RS) in characterizing carotenoids, which have recently gained attention due to new findings on their health-promoting effects and rising demand in the food, pharmaceutical, and cosmetic industries. The backbone structure in the form of a polyene chain makes carotenoids sensitive to Raman spectroscopy, mainly due to the stretching vibrations of their conjugated double bonds. Raman spectroscopy is increasingly used in agricultural and food sciences and technologies as it is a non-preparative, environmentally friendly, fast and efficient method for characterizing target analytes. The application of RS in the qualitative and quantitative analysis of carotenoids requires the careful selection and adjustment of various instrument parameters (e.g., laser wavelength, laser power, spectral resolution, detector type, etc.) as well as performing complex chemometric modeling to interpret the Raman spectra. Most of the studies covered in this review focus more on qualitative than quantitative analysis. The most frequently used laser wavelengths are 1064, 785, and 532 nm, while 633 nm is the least used. Considering the sensitivity and complexity of RS, the present study focuses on the specific and critical points in the analysis of carotenoids by RS. The main methodological and experimental principles in the study of food carotenoids by RS are discussed and best practices recommended, while the future prospects and expectations for a wider application of RS, especially in food quality assessment, are emphasized. New Raman techniques such as Spatially Offset Raman Spectroscopy (SORS), Coherent Anti-Stokes Raman Spectroscopy (CARS) and Stimulated Raman Scattering Spectroscopy (SRS), as well as the application of artificial intelligence, are also described in the context of carotenoids analysis.
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Affiliation(s)
- Stefan M. Kolašinac
- Department of Agrobotany, Faculty of Agriculture, University of Belgrade, Nemanjina 6, Zemun, 11080 Belgrade, Serbia; (I.P.); (Z.P.D.S.)
| | - Ilinka Pećinar
- Department of Agrobotany, Faculty of Agriculture, University of Belgrade, Nemanjina 6, Zemun, 11080 Belgrade, Serbia; (I.P.); (Z.P.D.S.)
| | - Radoš Gajić
- Institute of Physics, Centre for Solid State Physics and New Materials, P.O. Box 68, Pregrevica 118, 11080 Belgrade, Serbia;
| | - Dragosav Mutavdžić
- Institute for Multidisciplinary Research, University of Belgrade, Kneza Višeslava 1, 11030 Belgrade, Serbia;
| | - Zora P. Dajić Stevanović
- Department of Agrobotany, Faculty of Agriculture, University of Belgrade, Nemanjina 6, Zemun, 11080 Belgrade, Serbia; (I.P.); (Z.P.D.S.)
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Murray SC, Verhoef A, Adak A, Sen D, Salzman R, Jaiswal P, Naithani S. Detecting novel plant pathogen threats to food system security by integrating the Plant Reactome and remote sensing. CURRENT OPINION IN PLANT BIOLOGY 2025; 83:102684. [PMID: 39754892 DOI: 10.1016/j.pbi.2024.102684] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/27/2024] [Revised: 11/12/2024] [Accepted: 12/03/2024] [Indexed: 01/06/2025]
Abstract
Plant diseases constantly threaten crops and food systems, while global connectivity further increases the risks of spreading existing and exotic pathogens. Here, we first explore how an integrative approach involving plant pathway knowledgegraphs, differential gene expression data, and biochemical data informing Raman spectroscopy could be used to detect plant pathways responding to pathogen attacks. The Plant Reactome (https://plantreactome.gramene.org) demonstrates the potential to synthesize knowledgegraphs depicting plant-pathogen interactions, leveraging availability of publicly available OMIC data sets related to major diseases of rice and maize. Plant pathway signatures may then guide the development of drone and satellite remote-sensing methods for early monitoring of disease outbreaks across farms and landscapes. A review of current proximal- and remote-sensing technology demonstrates the potential for actionable early pathogen detection. We furthermore identify knowledge gaps that need to be addressed for developing these tools as components of effective strategies for safeguarding global food security against current and emerging pathogens.
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Affiliation(s)
- Seth C Murray
- Department of Soil and Crop Sciences, Texas A&M University, College Station, TX 77843, USA.
| | - Aart Verhoef
- Department of Soil and Crop Sciences, Texas A&M University, College Station, TX 77843, USA
| | - Alper Adak
- Department of Soil and Crop Sciences, Texas A&M University, College Station, TX 77843, USA
| | - Dipankar Sen
- Department of Soil and Crop Sciences, Texas A&M University, College Station, TX 77843, USA; Department of Physics and Astronomy, Texas A&M University, College Station, TX 77843, USA
| | - Riva Salzman
- Department of Soil and Crop Sciences, Texas A&M University, College Station, TX 77843, USA
| | - Pankaj Jaiswal
- Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR 97331, USA
| | - Sushma Naithani
- Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR 97331, USA
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5
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Juárez I, Naron A, Blank H, Polymenis M, Threadgill DW, Bailey RL, Stover PJ, Kurouski D. Noninvasive Optical Sensing of Aging and Diet Preferences Using Raman Spectroscopy. Anal Chem 2025; 97:969-975. [PMID: 39743337 PMCID: PMC11740184 DOI: 10.1021/acs.analchem.4c05853] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2024] [Revised: 12/10/2024] [Accepted: 12/19/2024] [Indexed: 01/04/2025]
Abstract
Effective dietary strategies and interventions for monitoring dietary exposures require accurate and noninvasive methods to understand how diet modulates health and risk of obesity; advances in technology are transforming the landscape and enabling more specific tailored approaches to nutritional guidance. This study explores the use of Raman spectroscopy (RS), a noninvasive and nondestructive analytical technique, to identify changes in the mice skin in response to constant dietary exposures. We found that RS is highly accurate to determine body composition as a result of habitual dietary patterns, specifically Vegan, Typical American, and Ketogenic diets, all very common in the US context. RS is based on major differences in the intensities of vibrational bands that originate from collagen. Moreover, RS could be used to predict folate deficiency and identify the sex of the animals. Finally, we found that RS could be used to track the chronological age of the mice. Considering the hand-held nature of the utilized spectrometer, one can expect that RS could be used to monitor and, consequently, personalize effects of diet on the body composition.
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Affiliation(s)
- Isaac
D. Juárez
- Department
of Biochemistry and Biophysics, Texas A&M
University, College
Station, Texas 77843, United States
| | - Alexandra Naron
- Department
of Biochemistry and Biophysics, Texas A&M
University, College
Station, Texas 77843, United States
| | - Heidi Blank
- Department
of Biochemistry and Biophysics, Texas A&M
University, College
Station, Texas 77843, United States
| | - Michael Polymenis
- Department
of Biochemistry and Biophysics, Texas A&M
University, College
Station, Texas 77843, United States
| | - David W. Threadgill
- Department
of Biochemistry and Biophysics, Texas A&M
University, College
Station, Texas 77843, United States
| | - Regan L. Bailey
- Department
of Nutrition, Texas A&M University, College Station, Texas 77843, United States
- Institute
for Advancing Health through Agriculture Texas A&M University, College Station, Texas 77843, United States
| | - Patrick J. Stover
- Department
of Biochemistry and Biophysics, Texas A&M
University, College
Station, Texas 77843, United States
- Institute
for Advancing Health through Agriculture Texas A&M University, College Station, Texas 77843, United States
| | - Dmitry Kurouski
- Department
of Biochemistry and Biophysics, Texas A&M
University, College
Station, Texas 77843, United States
- Institute
for Advancing Health through Agriculture Texas A&M University, College Station, Texas 77843, United States
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6
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Vega-Castellote M, Pérez-Marín D, Wold JP, Afseth NK, Sánchez MT. Exploring Near-Infrared and Raman Spectroscopies for the Non-Destructive In-Situ Estimation of Sweetness in Half Watermelons. Foods 2024; 13:3971. [PMID: 39683042 DOI: 10.3390/foods13233971] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2024] [Revised: 12/02/2024] [Accepted: 12/07/2024] [Indexed: 12/18/2024] Open
Abstract
Watermelons are in high demand for their juicy texture and sweetness, which is linked to their soluble solids content (SSC). Traditionally, watermelons have been sold as whole fruits. However, the decline in the mean size of households and the very large size of the fruits, together with high prices, mainly at the beginning of the season, mean that supermarkets now sell them as half fruits. For consumers, it is important to know in advance that the fruits that they are purchasing are of a high quality, based not only on external flesh colour but also on sweetness. Near-infrared spectroscopy (NIRS) and Raman spectroscopy were used for the in situ determination of SSC in half watermelons while simulating supermarket conditions. A handheld linear variable filter (LVF) device and an all-in-one (AIO) Process Raman analyser were used for the NIRS and Raman analysis, respectively. The excellent results obtained-including residual predictive deviation for prediction (RPDp) values of 3.06 and 2.90 for NIRS and Raman, respectively-showed the viability of NIRS and Raman spectroscopies for the prediction of sweetness in half watermelons.
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Affiliation(s)
- Miguel Vega-Castellote
- Department of Bromatology and Food Technology, University of Cordoba, Rabanales Campus, 14071 Córdoba, Spain
| | - Dolores Pérez-Marín
- Department of Animal Production, University of Cordoba, Rabanales Campus, 14071 Córdoba, Spain
| | - Jens Petter Wold
- Nofima Ås-Norwegian Institute of Food, Fisheries and Aquaculture Research, PB 210, N-1431 Ås, Norway
| | - Nils Kristian Afseth
- Nofima Ås-Norwegian Institute of Food, Fisheries and Aquaculture Research, PB 210, N-1431 Ås, Norway
| | - María-Teresa Sánchez
- Department of Bromatology and Food Technology, University of Cordoba, Rabanales Campus, 14071 Córdoba, Spain
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7
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Juárez ID, Kurouski D. Contemporary applications of vibrational spectroscopy in plant stresses and phenotyping. FRONTIERS IN PLANT SCIENCE 2024; 15:1411859. [PMID: 39345978 PMCID: PMC11427297 DOI: 10.3389/fpls.2024.1411859] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/03/2024] [Accepted: 08/08/2024] [Indexed: 10/01/2024]
Abstract
Plant pathogens, including viruses, bacteria, and fungi, cause massive crop losses around the world. Abiotic stresses, such as drought, salinity and nutritional deficiencies are even more detrimental. Timely diagnostics of plant diseases and abiotic stresses can be used to provide site- and doze-specific treatment of plants. In addition to the direct economic impact, this "smart agriculture" can help minimizing the effect of farming on the environment. Mounting evidence demonstrates that vibrational spectroscopy, which includes Raman (RS) and infrared spectroscopies (IR), can be used to detect and identify biotic and abiotic stresses in plants. These findings indicate that RS and IR can be used for in-field surveillance of the plant health. Surface-enhanced RS (SERS) has also been used for direct detection of plant stressors, offering advantages over traditional spectroscopies. Finally, all three of these technologies have applications in phenotyping and studying composition of crops. Such non-invasive, non-destructive, and chemical-free diagnostics is set to revolutionize crop agriculture globally. This review critically discusses the most recent findings of RS-based sensing of biotic and abiotic stresses, as well as the use of RS for nutritional analysis of foods.
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Affiliation(s)
- Isaac D. Juárez
- Department of Biochemistry and Biophysics, Texas A&M University, College Station, TX, United States
- Interdisciplinary Faculty of Toxicology, Texas A&M University,
College Station, TX, United States
| | - Dmitry Kurouski
- Department of Biochemistry and Biophysics, Texas A&M University, College Station, TX, United States
- Interdisciplinary Faculty of Toxicology, Texas A&M University,
College Station, TX, United States
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8
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Holman AP, Goff NK, Juárez ID, Higgins S, Rodriguez A, Bagavathiannan M, Kurouski D, Subramanian N. Elucidation of sex from mature Palmer amaranth ( Amaranthus palmeri) leaves using a portable Raman spectrometer. RSC Adv 2024; 14:1833-1837. [PMID: 38192310 PMCID: PMC10772952 DOI: 10.1039/d3ra06368b] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2023] [Accepted: 01/01/2024] [Indexed: 01/10/2024] Open
Abstract
Palmer amaranth (Amaranthus palmeri) is a pervasive and troublesome weed species that poses significant challenges to agriculture in the United States. Identifying the sex of Palmer amaranth plants is crucial for developing tailored control measures due to the distinct characteristics and reproductive strategies exhibited by male and female plants. Traditional methods for sex determination are expensive and time-consuming, but recent advancements in spectroscopic techniques offer new possibilities. This study explores the potential of portable Raman spectroscopy for determining the sex of mature Palmer amaranth plants in-field. Raman analysis of the plant leaves reveals spectral differences associated with nitrate salts, lipids, carotenoids, and terpenoids, allowing for high accuracy and reliable identification of the plant's sex; male plants had higher concentrations of these compounds compared to females. It was also found that male plants had higher concentrations of these compounds compared to the females. Raman spectra were analyzed using a machine learning tool, partial least squares discriminant analysis (PLS-DA), to generate accuracies of no less than 83.7% when elucidating sex from acquired spectra. These findings provide insights into the sex-specific characteristics of Palmer amaranth and suggest that Raman analysis, combined with PLS-DA, can be a promising, non-destructive, and efficient method for sex determination in field settings. This approach has implications for developing sex-specific management strategies to monitor and control this invasive weed in real-world environments, benefiting farmers, agronomists, researchers, and master gardeners.
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Affiliation(s)
- Aidan P Holman
- Department of Entomology, Texas A&M University College Station Texas 77843 USA
- Department of Biochemistry and Biophysics, Texas A&M University College Station Texas 77843 USA
| | - Nicolas K Goff
- Department of Biochemistry and Biophysics, Texas A&M University College Station Texas 77843 USA
- The University of Texas at Austin Dell Medical School Austin Texas 78712 USA
| | - Isaac D Juárez
- Department of Biochemistry and Biophysics, Texas A&M University College Station Texas 77843 USA
| | - Samantha Higgins
- Department of Biochemistry and Biophysics, Texas A&M University College Station Texas 77843 USA
| | - Axell Rodriguez
- Department of Biochemistry and Biophysics, Texas A&M University College Station Texas 77843 USA
| | | | - Dmitry Kurouski
- Department of Biochemistry and Biophysics, Texas A&M University College Station Texas 77843 USA
- Institute for Advancing Health Through Agriculture College Station Texas 77843 USA
| | - Nithya Subramanian
- Department of Soil and Crop Sciences, Texas A&M University College Station Texas 77843 USA
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Harris G, Stickland CA, Lim M, Goldberg Oppenheimer P. Raman Spectroscopy Spectral Fingerprints of Biomarkers of Traumatic Brain Injury. Cells 2023; 12:2589. [PMID: 37998324 PMCID: PMC10670390 DOI: 10.3390/cells12222589] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Revised: 11/02/2023] [Accepted: 11/06/2023] [Indexed: 11/25/2023] Open
Abstract
Traumatic brain injury (TBI) affects millions of people of all ages around the globe. TBI is notoriously hard to diagnose at the point of care, resulting in incorrect patient management, avoidable death and disability, long-term neurodegenerative complications, and increased costs. It is vital to develop timely, alternative diagnostics for TBI to assist triage and clinical decision-making, complementary to current techniques such as neuroimaging and cognitive assessment. These could deliver rapid, quantitative TBI detection, by obtaining information on biochemical changes from patient's biofluids. If available, this would reduce mis-triage, save healthcare providers costs (both over- and under-triage are expensive) and improve outcomes by guiding early management. Herein, we utilize Raman spectroscopy-based detection to profile a panel of 18 raw (human, animal, and synthetically derived) TBI-indicative biomarkers (N-acetyl-aspartic acid (NAA), Ganglioside, Glutathione (GSH), Neuron Specific Enolase (NSE), Glial Fibrillary Acidic Protein (GFAP), Ubiquitin C-terminal Hydrolase L1 (UCHL1), Cholesterol, D-Serine, Sphingomyelin, Sulfatides, Cardiolipin, Interleukin-6 (IL-6), S100B, Galactocerebroside, Beta-D-(+)-Glucose, Myo-Inositol, Interleukin-18 (IL-18), Neurofilament Light Chain (NFL)) and their aqueous solution. The subsequently derived unique spectral reference library, exploiting four excitation lasers of 514, 633, 785, and 830 nm, will aid the development of rapid, non-destructive, and label-free spectroscopy-based neuro-diagnostic technologies. These biomolecules, released during cellular damage, provide additional means of diagnosing TBI and assessing the severity of injury. The spectroscopic temporal profiles of the studied biofluid neuro-markers are classed according to their acute, sub-acute, and chronic temporal injury phases and we have further generated detailed peak assignment tables for each brain-specific biomolecule within each injury phase. The intensity ratios of significant peaks, yielding the combined unique spectroscopic barcode for each brain-injury marker, are compared to assess variance between lasers, with the smallest variance found for UCHL1 (σ2 = 0.000164) and the highest for sulfatide (σ2 = 0.158). Overall, this work paves the way for defining and setting the most appropriate diagnostic time window for detection following brain injury. Further rapid and specific detection of these biomarkers, from easily accessible biofluids, would not only enable the triage of TBI, predict outcomes, indicate the progress of recovery, and save healthcare providers costs, but also cement the potential of Raman-based spectroscopy as a powerful tool for neurodiagnostics.
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Affiliation(s)
- Georgia Harris
- Advanced Nanomaterials Structures and Applications Laboratories, School of Chemical Engineering, College of Engineering and Physical Sciences, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK
| | - Clarissa A. Stickland
- Advanced Nanomaterials Structures and Applications Laboratories, School of Chemical Engineering, College of Engineering and Physical Sciences, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK
| | - Matthias Lim
- Advanced Nanomaterials Structures and Applications Laboratories, School of Chemical Engineering, College of Engineering and Physical Sciences, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK
| | - Pola Goldberg Oppenheimer
- Advanced Nanomaterials Structures and Applications Laboratories, School of Chemical Engineering, College of Engineering and Physical Sciences, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK
- Institute of Healthcare Technologies, Mindelsohn Way, Birmingham B15 2TH, UK
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10
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Pirutin SK, Jia S, Yusipovich AI, Shank MA, Parshina EY, Rubin AB. Vibrational Spectroscopy as a Tool for Bioanalytical and Biomonitoring Studies. Int J Mol Sci 2023; 24:ijms24086947. [PMID: 37108111 PMCID: PMC10138916 DOI: 10.3390/ijms24086947] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2023] [Revised: 03/30/2023] [Accepted: 04/04/2023] [Indexed: 04/29/2023] Open
Abstract
The review briefly describes various types of infrared (IR) and Raman spectroscopy methods. At the beginning of the review, the basic concepts of biological methods of environmental monitoring, namely bioanalytical and biomonitoring methods, are briefly considered. The main part of the review describes the basic principles and concepts of vibration spectroscopy and microspectrophotometry, in particular IR spectroscopy, mid- and near-IR spectroscopy, IR microspectroscopy, Raman spectroscopy, resonance Raman spectroscopy, Surface-enhanced Raman spectroscopy, and Raman microscopy. Examples of the use of various methods of vibration spectroscopy for the study of biological samples, especially in the context of environmental monitoring, are given. Based on the described results, the authors conclude that the near-IR spectroscopy-based methods are the most convenient for environmental studies, and the relevance of the use of IR and Raman spectroscopy in environmental monitoring will increase with time.
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Affiliation(s)
- Sergey K Pirutin
- Faculty of Biology, Shenzhen MSU-BIT University, No. 1, International University Park Road, Dayun New Town, Longgang District, Shenzhen 518172, China
- Faculty of Biology, Lomonosov Moscow State University, GSP-1, Leninskie Gory, 119991 Moscow, Russia
- Institute of Theoretical and Experimental Biophysics of Russian Academy of Sciences, Institutskaya St. 3, 142290 Pushchino, Russia
| | - Shunchao Jia
- Faculty of Biology, Shenzhen MSU-BIT University, No. 1, International University Park Road, Dayun New Town, Longgang District, Shenzhen 518172, China
| | - Alexander I Yusipovich
- Faculty of Biology, Lomonosov Moscow State University, GSP-1, Leninskie Gory, 119991 Moscow, Russia
| | - Mikhail A Shank
- Faculty of Biology, Shenzhen MSU-BIT University, No. 1, International University Park Road, Dayun New Town, Longgang District, Shenzhen 518172, China
- Faculty of Biology, Lomonosov Moscow State University, GSP-1, Leninskie Gory, 119991 Moscow, Russia
| | - Evgeniia Yu Parshina
- Faculty of Biology, Lomonosov Moscow State University, GSP-1, Leninskie Gory, 119991 Moscow, Russia
| | - Andrey B Rubin
- Faculty of Biology, Shenzhen MSU-BIT University, No. 1, International University Park Road, Dayun New Town, Longgang District, Shenzhen 518172, China
- Faculty of Biology, Lomonosov Moscow State University, GSP-1, Leninskie Gory, 119991 Moscow, Russia
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Kitahama Y, Pancorbo PM, Segawa H, Marumi M, Xiao TH, Hiramatsu K, Yang W, Goda K. Place & Play SERS: sample collection and preparation-free surface-enhanced Raman spectroscopy. ANALYTICAL METHODS : ADVANCING METHODS AND APPLICATIONS 2023; 15:1028-1036. [PMID: 36762487 DOI: 10.1039/d2ay02090d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Abstract
The ability to perform sensitive, real-time, in situ, multiplex chemical analysis is indispensable for diverse applications such as human health monitoring, food safety testing, forensic analysis, environmental sensing, and homeland security. Surface-enhanced Raman spectroscopy (SERS) is an effective tool to offer the ability by virtue of its high sensitivity and rapid label-free signal detection as well as the availability of portable Raman spectrometers. Unfortunately, the practical utility of SERS is limited because it generally requires sample collection and preparation, namely, collecting a sample from an object of interest and placing the sample on top of a SERS substrate to perform a SERS measurement. In fact, not all analytes can satisfy this requirement because the sample collection and preparation process may be undesirable, laborious, difficult, dangerous, costly, or time-consuming. Here we introduce "Place & Play SERS" based on an ultrathin, flexible, stretchable, adhesive, biointegratable gold-deposited polyvinyl alcohol (PVA) nanomesh substrate that enables placing the substrate on top of an object of interest and performing a SERS measurement of the object by epi-excitation without the need for touching, destroying, and sampling it. Specifically, we characterized the sensitivity of the gold/PVA nanomesh substrate in the Place & Play SERS measurement scheme and then used the scheme to conduct SERS measurements of both wet and dry objects under nearly real-world conditions. To show the practical utility of Place & Play SERS, we demonstrated two examples of its application: food safety testing and forensic analysis. Our results firmly verified the new measurement scheme of SERS and are expected to extend the potential of SERS by opening up untapped applications of sensitive, real-time, in situ multiplex chemical analysis.
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Affiliation(s)
- Yasutaka Kitahama
- Department of Chemistry, The University of Tokyo, Tokyo 113-0033, Japan.
- LucasLand, Co. Ltd, Tokyo 101-0052, Japan
| | | | - Hiroki Segawa
- Third Department of Forensic Science, National Research Institute of Police Science, Chiba 277-0882, Japan
| | - Machiko Marumi
- Department of Chemistry, The University of Tokyo, Tokyo 113-0033, Japan.
| | - Ting-Hui Xiao
- Department of Chemistry, The University of Tokyo, Tokyo 113-0033, Japan.
- LucasLand, Co. Ltd, Tokyo 101-0052, Japan
- Institute for Quantum Life Science, National Institute for Quantum and Radiological Science and Technology, Chiba 263-8555, Japan
| | - Kotaro Hiramatsu
- Department of Chemistry, The University of Tokyo, Tokyo 113-0033, Japan.
| | | | - Keisuke Goda
- Department of Chemistry, The University of Tokyo, Tokyo 113-0033, Japan.
- LucasLand, Co. Ltd, Tokyo 101-0052, Japan
- Institute for Quantum Life Science, National Institute for Quantum and Radiological Science and Technology, Chiba 263-8555, Japan
- Institute of Technological Sciences, Wuhan University, Hubei 430072, China
- Department of Bioengineering, University of California, Los Angeles, California 90095, USA
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