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Thamaraimanalan T, Gopal D, Vignesh S, Kishore Kumar K. Exploiting adaptive neuro-fuzzy inference systems for cognitive patterns in multimodal brain signal analysis. Sci Rep 2025; 15:9029. [PMID: 40091139 PMCID: PMC11911415 DOI: 10.1038/s41598-025-93241-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2024] [Accepted: 03/05/2025] [Indexed: 03/19/2025] Open
Abstract
The analysis of cognitive patterns through brain signals offers critical insights into human cognition, including perception, attention, memory, and decision-making. However, accurately classifying these signals remains a challenge due to their inherent complexity and non-linearity. This study introduces a novel method, PCA-ANFIS, which integrates Principal Component Analysis (PCA) and Adaptive Neuro-Fuzzy Inference Systems (ANFIS), to enhance cognitive pattern recognition in multimodal brain signal analysis. PCA reduces the dimensionality of EEG data while retaining salient features, enabling computational efficiency. ANFIS combines the adaptability of neural networks with the interpretability of fuzzy logic, making it well-suited to model the non-linear relationships within brain signals. Performance metrics of our proposed method, such as accuracy, sensitivity, and computational efficiency. These additions highlight the effectiveness of the method and provide a concise summary of the findings. The proposed method achieves superior classification performance, with an unprecedented accuracy of 99.5%, significantly outperforming existing approaches. Comprehensive experiments were conducted using a diverse multimodal EEG dataset, demonstrating the method's robustness and sensitivity. The integration of PCA and ANFIS addresses key challenges in multimodal brain signal analysis, such as EEG artifact contamination and non-stationarity, ensuring reliable feature extraction and classification. This research has significant implications for both cognitive neuroscience and clinical practice. By advancing the understanding of cognitive processes, the PCA-ANFIS method facilitates accurate diagnosis and treatment of cognitive disorders and neurological conditions. Future work will focus on testing the approach with larger and more diverse datasets and exploring its applicability in domains such as neurofeedback, neuromarketing, and brain-computer interfaces. This study establishes PCA-ANFIS as a capable tool for the precise and efficient classification of cognitive patterns in brain signal processing.
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Affiliation(s)
- T Thamaraimanalan
- Department of Electronics and Communication Engineering, Sri Eshwar College of Engineering, Coimbatore, 641 202, Tamil Nadu, India.
| | - Dhanalakshmi Gopal
- Department of Electronics and Communication Engineering, AVN Institute of Engineering and Technology, Hyderabad, India, 501510
| | - S Vignesh
- Department of Electronics and Communication Engineering, Sasi Institute of Technology and Engineering, Sasi College Rd, Near Aerodrome, Tadepalligudem, Andhra Pradesh, 534101, India
| | - K Kishore Kumar
- Department of Computer Science and Engineering, School of Computing, Vel Tech Rangarajan Dr.Sagunthala R&D Institute of Science and Technology, Avadi, Chennai, 600062, India
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Kassiri H, Muneeb A, Salahi R, Dabbaghian A. Closed-Loop Implantable Neurostimulators for Individualized Treatment of Intractable Epilepsy: A Review of Recent Developments, Ongoing Challenges, and Future Opportunities. IEEE TRANSACTIONS ON BIOMEDICAL CIRCUITS AND SYSTEMS 2024; 18:1268-1295. [PMID: 40030458 DOI: 10.1109/tbcas.2024.3456825] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/05/2025]
Abstract
Driven by its proven therapeutic efficacy in treating movement disorders and psychiatric conditions, neurostimulation has emerged as a promising intervention for intractable epilepsy. Researchers envision an advanced implantable device capable of long-term neuronal monitoring, high spatio-temporal resolution data processing, and timely responsive neurostimulation upon seizure detection. However, the stringent energy constraints of implantable devices and significant inter-patient variability in neural activity pose substantial challenges and opportunities for biomedical circuits and systems researchers. For seizure detection, various ASIC solutions employing both deterministic and data-driven algorithms have been developed. These solutions leverage a subset of numerous signal features (spanning time and frequency domains) and classifiers (such as SVMs, DNNs, SNNs) to achieve notable success in terms of detection accuracy, latency, and energy efficiency. Implementations vary widely in computational approaches (digital, mixed-signal, analog, spike-based), training strategies (online versus offline), and application targets (patient-specific versus cross-patient). In terms of treatment, recent efforts have focused on the personalization of stimulation waveforms to enhance therapeutic efficacy. This personalization faces complex challenges, including a limited understanding of how stimulation parameters influence neuronal activity, the lack of a comprehensive brain model to capture its intricate electrochemical dynamics, and recording neural signals in the presence of stimulation artifacts. This review provides a comprehensive overview of the field, detailing the foundational principles, recent advancements, and ongoing challenges in enhancing the diagnostic accuracy, treatment efficacy, and energy efficiency of implantable patient-optimized neurostimulators. We also discuss potential future directions, emphasizing the need for standardized performance metrics, advanced computational models, and adaptive stimulation protocols to realize the full potential of this transformative technology.
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Nkengue MJ, Zeng X, Koehl L, Tao X, Dassonville F, Dumont N, Ye-Lehmann S, Akwa Y, Ye H. An intelligent garment for long COVID-19 real-time monitoring. Comput Biol Med 2024; 181:109067. [PMID: 39182371 DOI: 10.1016/j.compbiomed.2024.109067] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2024] [Revised: 08/13/2024] [Accepted: 08/21/2024] [Indexed: 08/27/2024]
Abstract
As monitoring and diagnostic tools for long COVID-19 cases, wearable systems and supervised learning-based medical image analysis have proven to be useful. Current research on these two technical roadmaps has various drawbacks, despite their respective benefits. Wearable systems allow only the real-time monitoring of physiological parameters (heart rate, temperature, blood oxygen saturation, or SpO2). Therefore, they are unable to conduct in-depth investigations or differentiate COVID-19 from other illnesses that share similar symptoms. Medical image analysis using supervised learning-based models can be used to conduct in-depth analyses and provide precise diagnostic decision support. However, these methods are rarely used for real-time monitoring. In this regard, we present an intelligent garment combining the precision of supervised learning-based models with real-time monitoring capabilities of wearable systems. Given the relevance of electrocardiogram (ECG) signals to long COVID-19 symptom severity, an explainable data fusion strategy based on multiple machine learning models uses heart rate, temperature, SpO2, and ECG signal analysis to accurately assess the patient's health status. Experiments show that the proposed intelligent garment achieves an accuracy of 97.5 %, outperforming most of the existing wearable systems. Furthermore, it was confirmed that the two physiological indicators most significantly affected by the presence of long COVID-19 were SpO2 and the ST intervals of ECG signals.
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Affiliation(s)
- Marc Junior Nkengue
- Univ. Lille, ENSAIT, Laboratoire Génie et Matériaux Textile (GEMTEX), F-59000, Lille, France; Univ. Lille, Ecole Centrale Lille, F-59000, Lille, France.
| | - Xianyi Zeng
- Univ. Lille, ENSAIT, Laboratoire Génie et Matériaux Textile (GEMTEX), F-59000, Lille, France
| | - Ludovic Koehl
- Univ. Lille, ENSAIT, Laboratoire Génie et Matériaux Textile (GEMTEX), F-59000, Lille, France
| | - Xuyuan Tao
- Univ. Lille, ENSAIT, Laboratoire Génie et Matériaux Textile (GEMTEX), F-59000, Lille, France
| | - François Dassonville
- Univ. Lille, ENSAIT, Laboratoire Génie et Matériaux Textile (GEMTEX), F-59000, Lille, France
| | - Nicolas Dumont
- Univ. Lille, ENSAIT, Laboratoire Génie et Matériaux Textile (GEMTEX), F-59000, Lille, France
| | - Shixin Ye-Lehmann
- Univ. Paris-Saclay, Diseases and Hormones of the Nervous System, F-94000, Paris, France
| | - Yvette Akwa
- Univ. Paris-Saclay, Diseases and Hormones of the Nervous System, F-94000, Paris, France
| | - Hanwen Ye
- Univ. Paris-Saclay, Diseases and Hormones of the Nervous System, F-94000, Paris, France
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Farhadi Sedehi J, Jafarnia Dabanloo N, Maghooli K, Sheikhani A. Multimodal insights into granger causality connectivity: Integrating physiological signals and gated eye-tracking data for emotion recognition using convolutional neural network. Heliyon 2024; 10:e36411. [PMID: 39253213 PMCID: PMC11381760 DOI: 10.1016/j.heliyon.2024.e36411] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2024] [Revised: 08/14/2024] [Accepted: 08/14/2024] [Indexed: 09/11/2024] Open
Abstract
This study introduces a groundbreaking method to enhance the accuracy and reliability of emotion recognition systems by combining electrocardiogram (ECG) with electroencephalogram (EEG) data, using an eye-tracking gated strategy. Initially, we propose a technique to filter out irrelevant portions of emotional data by employing pupil diameter metrics from eye-tracking data. Subsequently, we introduce an innovative approach for estimating effective connectivity to capture the dynamic interaction between the brain and the heart during emotional states of happiness and sadness. Granger causality (GC) is estimated and utilized to optimize input for a highly effective pre-trained convolutional neural network (CNN), specifically ResNet-18. To assess this methodology, we employed EEG and ECG data from the publicly available MAHNOB-HCI database, using a 5-fold cross-validation approach. Our method achieved an impressive average accuracy and area under the curve (AUC) of 91.00 % and 0.97, respectively, for GC-EEG-ECG images processed with ResNet-18. Comparative analysis with state-of-the-art studies clearly shows that augmenting ECG with EEG and refining data with an eye-tracking strategy significantly enhances emotion recognition performance across various emotions.
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Affiliation(s)
- Javid Farhadi Sedehi
- Department of Biomedical Engineering, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Nader Jafarnia Dabanloo
- Department of Biomedical Engineering, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Keivan Maghooli
- Department of Biomedical Engineering, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Ali Sheikhani
- Department of Biomedical Engineering, Science and Research Branch, Islamic Azad University, Tehran, Iran
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5
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Sonmez ME, Gumus NE, Eczacioglu N, Develi EE, Yücel K, Yildiz HB. Enhancing microalgae classification accuracy in marine ecosystems through convolutional neural networks and support vector machines. MARINE POLLUTION BULLETIN 2024; 205:116616. [PMID: 38936001 DOI: 10.1016/j.marpolbul.2024.116616] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2024] [Revised: 06/13/2024] [Accepted: 06/16/2024] [Indexed: 06/29/2024]
Abstract
Accurately classifying microalgae species is vital for monitoring marine ecosystems and managing the emergence of marine mucilage, which is crucial for monitoring mucilage phenomena in marine environments. Traditional methods have been inadequate due to time-consuming processes and the need for expert knowledge. The purpose of this article is to employ convolutional neural networks (CNNs) and support vector machines (SVMs) to improve classification accuracy and efficiency. By employing advanced computational techniques, including MobileNet and GoogleNet models, alongside SVM classification, the study demonstrates significant advancements over conventional identification methods. In the classification of a dataset consisting of 7820 images using four different SVM kernel functions, the linear kernel achieved the highest success rate at 98.79 %. It is followed by the RBF kernel at 98.73 %, the polynomial kernel at 97.84 %, and the sigmoid kernel at 97.20 %. This research not only provides a methodological framework for future studies in marine biodiversity monitoring but also highlights the potential for real-time applications in ecological conservation and understanding mucilage dynamics amidst climate change and environmental pollution.
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Affiliation(s)
- Mesut Ersin Sonmez
- Department of Bioengineering, Faculty of Engineering, Karamanoglu Mehmetbey University, Karaman, Türkiye
| | - Numan Emre Gumus
- Department of Environmental Protection Technology, Kazım Karabekir Vocational School, Karamanoglu Mehmetbey University, Karaman, Türkiye.
| | - Numan Eczacioglu
- Department of Bioengineering, Faculty of Engineering, Karamanoglu Mehmetbey University, Karaman, Türkiye
| | | | - Kamile Yücel
- Department of Medical Biochemistry, Faculty of Medicine, KTO, Karatay University, Konya, Türkiye
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Al-Qazzaz NK, Alrahhal M, Jaafer SH, Ali SHBM, Ahmad SA. Automatic diagnosis of epileptic seizures using entropy-based features and multimodel deep learning approaches. Med Eng Phys 2024; 130:104206. [PMID: 39160030 DOI: 10.1016/j.medengphy.2024.104206] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2024] [Revised: 05/16/2024] [Accepted: 07/01/2024] [Indexed: 08/21/2024]
Abstract
Epilepsy is one of the most common brain diseases, characterised by repeated seizures that occur on a regular basis. During a seizure, a patient's muscles flex uncontrollably, causing a loss of mobility and balance, which can be harmful or even fatal. Developing an automatic approach for warning patients of oncoming seizures necessitates substantial research. Analyzing the electroencephalogram (EEG) output from the human brain's scalp region can help predict seizures. EEG data were analyzed to extract time domain features such as Hurst exponent (Hur), Tsallis entropy (TsEn), enhanced permutation entropy (impe), and amplitude-aware permutation entropy (AAPE). In order to automatically diagnose epileptic seizure in children from normal children, this study conducted two sessions. In the first session, the extracted features from the EEG dataset were classified using three machine learning (ML)-based models, including support vector machine (SVM), K nearest neighbor (KNN), or decision tree (DT), and in the second session, the dataset was classified using three deep learning (DL)-based recurrent neural network (RNN) classifiers in The EEG dataset was obtained from the Neurology Clinic of the Ibn Rushd Training Hospital. In this regard, extensive explanations and research from the time domain and entropy characteristics demonstrate that employing GRU, LSTM, and BiLSTM RNN deep learning classifiers on the All-time-entropy fusion feature improves the final classification results.
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Affiliation(s)
- Noor Kamal Al-Qazzaz
- Department of Biomedical Engineering, Al-Khwarizmi College of Engineering, University of Baghdad, Baghdad, 47146, Iraq.
| | - Maher Alrahhal
- Department of Computer Science and Engineering, Jawaharlal Nehru Technological University Hyderabad, University College of Engineering, Science and Technology Hyderabad, Telangana, India.
| | - Sumai Hamad Jaafer
- Medical Laboratory Department, Erbil Medical Institute, Erbil Polytechnic University, Kirkuk Road, Hadi Chawshli Street, Kurdistan Region, Erbil, Iraq.
| | - Sawal Hamid Bin Mohd Ali
- Department of Electrical, Electronic and Systems Engineering, Faculty of Engineering and Built Environment, Universiti Kebangsaan Malaysia, UKM Bangi, Selangor, 43600, Malaysia; Centre of Advanced Electronic and Communication Engineering, Department of Electrical, Electronic and Systems Engineering, Universiti Kebangsaan Malaysia, UKM Bangi, Selangor, 43600, Malaysia.
| | - Siti Anom Ahmad
- Department of Electrical and Electronic Engineering, Faculty of Engineering, Universiti Putra Malaysia, UPM Serdang, Selangor, 43400, Malaysia; Malaysian Research Institute of Ageing (MyAgeing)TM, Universiti Putra Malaysia, UPM Serdang, Selangor, 43400, Malaysia.
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7
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Kantipudi MVVP, Kumar NSP, Aluvalu R, Selvarajan S, Kotecha K. An improved GBSO-TAENN-based EEG signal classification model for epileptic seizure detection. Sci Rep 2024; 14:843. [PMID: 38191643 PMCID: PMC10774431 DOI: 10.1038/s41598-024-51337-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2023] [Accepted: 01/03/2024] [Indexed: 01/10/2024] Open
Abstract
Detection and classification of epileptic seizures from the EEG signals have gained significant attention in recent decades. Among other signals, EEG signals are extensively used by medical experts for diagnosing purposes. So, most of the existing research works developed automated mechanisms for designing an EEG-based epileptic seizure detection system. Machine learning techniques are highly used for reduced time consumption, high accuracy, and optimal performance. Still, it limits by the issues of high complexity in algorithm design, increased error value, and reduced detection efficacy. Thus, the proposed work intends to develop an automated epileptic seizure detection system with an improved performance rate. Here, the Finite Linear Haar wavelet-based Filtering (FLHF) technique is used to filter the input signals and the relevant set of features are extracted from the normalized output with the help of Fractal Dimension (FD) analysis. Then, the Grasshopper Bio-Inspired Swarm Optimization (GBSO) technique is employed to select the optimal features by computing the best fitness value and the Temporal Activation Expansive Neural Network (TAENN) mechanism is used for classifying the EEG signals to determine whether normal or seizure affected. Numerous intelligence algorithms, such as preprocessing, optimization, and classification, are used in the literature to identify epileptic seizures based on EEG signals. The primary issues facing the majority of optimization approaches are reduced convergence rates and higher computational complexity. Furthermore, the problems with machine learning approaches include a significant method complexity, intricate mathematical calculations, and a decreased training speed. Therefore, the goal of the proposed work is to put into practice efficient algorithms for the recognition and categorization of epileptic seizures based on EEG signals. The combined effect of the proposed FLHF, FD, GBSO, and TAENN models might dramatically improve disease detection accuracy while decreasing complexity of system along with time consumption as compared to the prior techniques. By using the proposed methodology, the overall average epileptic seizure detection performance is increased to 99.6% with f-measure of 99% and G-mean of 98.9% values.
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Affiliation(s)
- M V V Prasad Kantipudi
- Symbiosis Institute of Technology, Symbiosis International (Deemed) University, Pune, 412115, India
| | - N S Pradeep Kumar
- S.E.A College of Engineering and Technology, Bengaluru, 560049, India
| | - Rajanikanth Aluvalu
- Department of Information Technology, Chaitanya Bharathi Institute of Technology, Hyderabad, 500075, India
| | - Shitharth Selvarajan
- School of Built Environment, Engineering and Computing, Leeds Beckett University, Leeds, LS1 3HE, UK.
- Department of Computer Science, Kebri Dehar University, Somali, Ethiopia.
| | - K Kotecha
- Symbiosis Institute of Technology, Symbiosis International (Deemed) University, Pune, 412115, India
- Symbiosis Centre for Applied Artificial Intelligence (SCAAI), Symbiosis International (Deemed) University, Pune, 412115, India
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Khalid M, Raza A, Akhtar A, Rustam F, Ballester JB, Rodriguez CL, Díez IDLT, Ashraf I. Diagnosing epileptic seizures using combined features from independent components and prediction probability from EEG data. Digit Health 2024; 10:20552076241277185. [PMID: 39502490 PMCID: PMC11536591 DOI: 10.1177/20552076241277185] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2024] [Accepted: 08/05/2024] [Indexed: 11/08/2024] Open
Abstract
Objective Epileptic seizures are neurological events that pose significant risks of physical injuries characterized by sudden, abnormal bursts of electrical activity in the brain, often leading to loss of consciousness and uncontrolled movements. Early seizure detection is essential for timely treatments and better patient outcomes. To address this critical issue, there is a need for an advanced artificial intelligence approach for the early detection of epileptic seizure disorder. Methods This study primarily focuses on designing a novel ensemble approach to perform early detection of epileptic seizure disease with high performance. A novel ensemble approach consisting of a fast, independent component analysis random forest (FIR) and prediction probability is proposed, which uses electroencephalography (EEG) data to investigate the efficacy of the proposed approach for early detection of epileptic seizures. The FIR model extracts independent components and class prediction probability features, creating a new feature set. The proposed model combined integrated component analysis (ICA) with predicting probability to enhance seizure recognition accuracy scores. Extensive experimental evaluations demonstrate that FIR assists machine learning models to obtain superior results compared to original features. Results The research gap is addressed using combined features to improve the performance of epileptic seizure detection compared to a single feature set. In particular, the ensemble model FIR with support vector machine (FIR + SVM) outperforms other methods, achieving an accuracy of 98.4% for epileptic seizure detection. Conclusions The proposed FIR has the potential for early diagnosis of epileptic seizures and can significantly help the medical industry with enhanced detection and timely interventions.
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Affiliation(s)
- Madiha Khalid
- School of Computer Science and Engineering, Central South University, Changsha, Hunan, China
| | - Ali Raza
- Department of Software Engineering, University Of Lahore, Lahore, Pakistan
| | - Adnan Akhtar
- Institute of Business Administration, Khwaja Fareed University of Engineering and Information Technology, Rahim Yar Khan,
Pakistan
| | - Furqan Rustam
- School of Computer Science, University College Dublin, Dublin, Ireland
| | - Julien Brito Ballester
- Universidad Europea del Atlantico, Santander, Spain
- Universidad Internacional Iberoamericana Arecibo, Puerto Rico, USA
- Universidad de La Romana, La Romana, Republica Dominicana
| | - Carmen Lili Rodriguez
- Universidad Europea del Atlantico, Santander, Spain
- Universidad Internacional Iberoamericana, Campeche, Mexico
- Universidade Internacional do Cuanza, Cuito, Angola
| | - Isabel de la Torre Díez
- Department of Signal Theory and Communications and Telematic Engineering, University of Valladolid, Paseo de Belen Valladolid,
Spain
| | - Imran Ashraf
- Department of Information and Communication Engineering, Yeungnam University, Gyeongsan South Korea
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Díaz Beltrán L, Madan CR, Finke C, Krohn S, Di Ieva A, Esteban FJ. Fractal Dimension Analysis in Neurological Disorders: An Overview. ADVANCES IN NEUROBIOLOGY 2024; 36:313-328. [PMID: 38468040 DOI: 10.1007/978-3-031-47606-8_16] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/13/2024]
Abstract
Fractal analysis has emerged as a powerful tool for characterizing irregular and complex patterns found in the nervous system. This characterization is typically applied by estimating the fractal dimension (FD), a scalar index that describes the topological complexity of the irregular components of the nervous system, both at the macroscopic and microscopic levels, that may be viewed as geometric fractals. Moreover, temporal properties of neurophysiological signals can also be interpreted as dynamic fractals. Given its sensitivity for detecting changes in brain morphology, FD has been explored as a clinically relevant marker of brain damage in several neuropsychiatric conditions as well as in normal and pathological cerebral aging. In this sense, evidence is accumulating for decreases in FD in Alzheimer's disease, frontotemporal dementia, Parkinson's disease, multiple sclerosis, and many other neurological disorders. In addition, it is becoming increasingly clear that fractal analysis in the field of clinical neurology opens the possibility of detecting structural alterations in the early stages of the disease, which highlights FD as a potential diagnostic and prognostic tool in clinical practice.
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Affiliation(s)
- Leticia Díaz Beltrán
- Department of Medical Oncology, Clinical Research Unit, University Hospital of Jaén, Jaén, Spain
| | | | - Carsten Finke
- Department of Neurology, Charité-Universitätsmedizin, Berlin, Germany
| | - Stephan Krohn
- Department of Neurology, Charité-Universitätsmedizin, Berlin, Germany
| | - Antonio Di Ieva
- Computational NeuroSurgery (CNS) Lab, Faculty of Medicine, Health and Human Sciences, Macquarie Medical School, Macquarie University, Sydney, NSW, Australia
| | - Francisco J Esteban
- Systems Biology Unit, Department of Experimental Biology, University of Jaén, Jaén, Spain.
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Di Ieva A, Davidson JM, Russo C. Computational Fractal-Based Neurosurgery. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2024; 1462:97-105. [PMID: 39523261 DOI: 10.1007/978-3-031-64892-2_6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2024]
Abstract
Fractal geometry is a branch of mathematics used to characterize and quantify the geometrical complexity of natural objects, with many applications in different fields, including physics, astronomy, geology, meteorology, finances, social sciences, and computer graphics. In the biomedical sciences, the use of fractal parameters has allowed the introduction of novel morphometric parameters, which have been shown to be useful to characterize any biomedical images as well as any time series within different domains of applications. Specifically, in the neurosciences and neurosurgery, the use of the fractal dimension and other computationally inferred fractal parameters has offered robust morphometric quantitators to characterize the brain in its wholeness, from neurons to the cortical structure and connections, and introduced new prognostic, diagnostic, and eventually therapeutic markers of many diseases of neurosurgical interest, including brain tumors and cerebrovascular malformations, as summarized in this chapter.
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Affiliation(s)
- Antonio Di Ieva
- Computational NeuroSurgery (CNS) Lab, Macquarie Medical School, Faculty of Medicine, Human and Health Sciences, Macquarie University, Sydney, NSW, Australia.
- Macquarie Neurosurgery & Spine, MQ Health, Macquarie University Hospital, Sydney, NSW, Australia.
- Department of Neurosurgery, Nepean Blue Mountains Local Health District, Kingswood, NSW, Australia.
- Centre for Applied Artificial Intelligence, School of Computing, Macquarie University, Sydney, NSW, Australia.
| | - Jennilee M Davidson
- Macquarie Medical School, Faculty of Medicine, Human and Health Sciences, Macquarie University, Sydney, NSW, Australia
| | - Carlo Russo
- Computational NeuroSurgery (CNS) Lab, Macquarie Medical School, Faculty of Medicine, Human and Health Sciences, Macquarie University, Sydney, NSW, Australia
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Antony MJ, Sankaralingam BP, Khan S, Almjally A, Almujally NA, Mahendran RK. Brain-Computer Interface: The HOL-SSA Decomposition and Two-Phase Classification on the HGD EEG Data. Diagnostics (Basel) 2023; 13:2852. [PMID: 37685390 PMCID: PMC10486696 DOI: 10.3390/diagnostics13172852] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Revised: 08/25/2023] [Accepted: 08/28/2023] [Indexed: 09/10/2023] Open
Abstract
An efficient processing approach is essential for increasing identification accuracy since the electroencephalogram (EEG) signals produced by the Brain-Computer Interface (BCI) apparatus are nonlinear, nonstationary, and time-varying. The interpretation of scalp EEG recordings can be hampered by nonbrain contributions to electroencephalographic (EEG) signals, referred to as artifacts. Common disturbances in the capture of EEG signals include electrooculogram (EOG), electrocardiogram (ECG), electromyogram (EMG) and other artifacts, which have a significant impact on the extraction of meaningful information. This study suggests integrating the Singular Spectrum Analysis (SSA) and Independent Component Analysis (ICA) methods to preprocess the EEG data. The key objective of our research was to employ Higher-Order Linear-Moment-based SSA (HOL-SSA) to decompose EEG signals into multivariate components, followed by extracting source signals using Online Recursive ICA (ORICA). This approach effectively improves artifact rejection. Experimental results using the motor imagery High-Gamma Dataset validate our method's ability to identify and remove artifacts such as EOG, ECG, and EMG from EEG data, while preserving essential brain activity.
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Affiliation(s)
- Mary Judith Antony
- Department of Computer Science & Engineering, Panimalar College of Engineering, Chennai 600123, India
| | - Baghavathi Priya Sankaralingam
- Department of Computer Science & Engineering, Amrita School of Computing, Amrita Vishwa Vidyapeetham, Chennai 601103, India
| | - Shakir Khan
- College of Computer and Information Sciences, Imam Mohammad Ibn Saud Islamic University (IMSIU), Riyadh 11432, Saudi Arabia; (S.K.); (A.A.)
- University Centre for Research and Development, Department of Computer Science and Engineering, Chandigarh University, Mohali 140413, India
| | - Abrar Almjally
- College of Computer and Information Sciences, Imam Mohammad Ibn Saud Islamic University (IMSIU), Riyadh 11432, Saudi Arabia; (S.K.); (A.A.)
| | - Nouf Abdullah Almujally
- Department of Information Systems, College of Computer and Information Sciences, Princess Nourah bint Abdulrahman University, Riyadh 11671, Saudi Arabia
| | - Rakesh Kumar Mahendran
- Department of Computer Science and Engineering, Rajalakshmi Engineering College, Chennai 602105, India;
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Lih OS, Jahmunah V, Palmer EE, Barua PD, Dogan S, Tuncer T, García S, Molinari F, Acharya UR. EpilepsyNet: Novel automated detection of epilepsy using transformer model with EEG signals from 121 patient population. Comput Biol Med 2023; 164:107312. [PMID: 37597408 DOI: 10.1016/j.compbiomed.2023.107312] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2023] [Revised: 08/02/2023] [Accepted: 08/04/2023] [Indexed: 08/21/2023]
Abstract
BACKGROUND Epilepsy is one of the most common neurological conditions globally, and the fourth most common in the United States. Recurrent non-provoked seizures characterize it and have huge impacts on the quality of life and financial impacts for affected individuals. A rapid and accurate diagnosis is essential in order to instigate and monitor optimal treatments. There is also a compelling need for the accurate interpretation of epilepsy due to the current scarcity in neurologist diagnosticians and a global inequity in access and outcomes. Furthermore, the existing clinical and traditional machine learning diagnostic methods exhibit limitations, warranting the need to create an automated system using deep learning model for epilepsy detection and monitoring using a huge database. METHOD The EEG signals from 35 channels were used to train the deep learning-based transformer model named (EpilepsyNet). For each training iteration, 1-min-long data were randomly sampled from each participant. Thereafter, each 5-s epoch was mapped to a matrix using the Pearson Correlation Coefficient (PCC), such that the bottom part of the triangle was discarded and only the upper triangle of the matrix was vectorized as input data. PCC is a reliable method used to measure the statistical relationship between two variables. Based on the 5 s of data, single embedding was performed thereafter to generate a 1-dimensional array of signals. In the final stage, a positional encoding with learnable parameters was added to each correlation coefficient's embedding before being fed to the developed EpilepsyNet as input data to epilepsy EEG signals. The ten-fold cross-validation technique was used to generate the model. RESULTS Our transformer-based model (EpilepsyNet) yielded high classification accuracy, sensitivity, specificity and positive predictive values of 85%, 82%, 87%, and 82%, respectively. CONCLUSION The proposed method is both accurate and robust since ten-fold cross-validation was employed to evaluate the performance of the model. Compared to the deep models used in existing studies for epilepsy diagnosis, our proposed method is simple and less computationally intensive. This is the earliest study to have uniquely employed the positional encoding with learnable parameters to each correlation coefficient's embedding together with the deep transformer model, using a huge database of 121 participants for epilepsy detection. With the training and validation of the model using a larger dataset, the same study approach can be extended for the detection of other neurological conditions, with a transformative impact on neurological diagnostics worldwide.
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Affiliation(s)
- Oh Shu Lih
- Cogninet Australia, Sydney, NSW, 2010, Australia
| | - V Jahmunah
- School of Engineering, Nanyang Polytechnic, Singapore
| | - Elizabeth Emma Palmer
- Centre of Clinical Genetics, Sydney Children's Hospitals Network, Randwick, 2031, Australia; School of Women's and Children's Health, University of New South Wales, Randwick, 2031, Australia
| | - Prabal D Barua
- School of Business (Information System), University of Southern Queensland, Australia
| | - Sengul Dogan
- Department of Digital Forensics Engineering, Technology Faculty, Firat University, Elazig, Turkey
| | - Turker Tuncer
- Department of Digital Forensics Engineering, Technology Faculty, Firat University, Elazig, Turkey
| | - Salvador García
- Andalusian Institute of Data Science and Computational Intelligence, Department of Computer Science and Artificial Intelligence, University of Granada, Spain
| | - Filippo Molinari
- Biolab, PolitoBIOMedLab, Department of Electronics and Telecommunications, Politecnico di Torino, Turin, Italy
| | - U Rajendra Acharya
- School of Mathematics, Physics and Computing, University of Southern Queensland, Springfield, Australia.
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EEG Channel Selection Techniques in Motor Imagery Applications: A Review and New Perspectives. BIOENGINEERING (BASEL, SWITZERLAND) 2022; 9:bioengineering9120726. [PMID: 36550932 PMCID: PMC9774545 DOI: 10.3390/bioengineering9120726] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/10/2022] [Revised: 10/28/2022] [Accepted: 10/30/2022] [Indexed: 11/25/2022]
Abstract
Communication, neuro-prosthetics, and environmental control are just a few applications for disabled persons who use robots and manipulators that use brain-computer interface (BCI) systems. The brain's motor imagery (MI) signal is an essential input for a brain-related task in BCI applications. Due to their noninvasive, portability, and cost-effectiveness, electroencephalography (EEG) signals are the most widely used input in BCI systems. The EEG data are often collected from more than 100 different locations in the brain; channel selection techniques are critical for selecting the optimum channels for a given application. However, when analyzing EEG data, the principal purpose of channel selection is to reduce computational complexity, improve classification accuracy by avoiding overfitting, and reduce setup time. Several channel selection assessment algorithms, both with and without classification-based methods, extracted appropriate channel subsets using defined criteria. Therefore, based on the exhaustive analysis of the EEG channel selection, this manuscript analyses several existing studies to reduce the number of noisy channels and improve system performance. We review several existing works to find the most promising MI-based EEG channel selection algorithms and associated classification methodologies on various datasets. Moreover, we focus on channel selection methods that choose fewer channels with great precision. Finally, our main finding is that a smaller channel set, typically 10-30% of total channels, provided excellent performance compared to other existing studies.
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Epileptic Seizure Detection Based on Variational Mode Decomposition and Deep Forest Using EEG Signals. Brain Sci 2022; 12:brainsci12101275. [PMID: 36291210 PMCID: PMC9599930 DOI: 10.3390/brainsci12101275] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2022] [Revised: 09/16/2022] [Accepted: 09/20/2022] [Indexed: 11/16/2022] Open
Abstract
Electroencephalography (EEG) records the electrical activity of the brain, which is an important tool for the automatic detection of epileptic seizures. It is certainly a very heavy burden to only recognize EEG epilepsy manually, so the method of computer-assisted treatment is of great importance. This paper presents a seizure detection algorithm based on variational modal decomposition (VMD) and a deep forest (DF) model. Variational modal decomposition is performed on EEG recordings, and the first three variational modal functions (VMFs) are selected to construct the time–frequency distribution of the EEG signals. Then, the log−Euclidean covariance matrix (LECM) is computed to represent the EEG properties and form EEG features. The deep forest model is applied to complete the EEG signal classification, which is a non-neural network deep model with a cascade structure that performs feature learning through the forest. In addition, to improve the classification accuracy, postprocessing techniques are performed to generate the discriminant results by moving average filtering and adaptive collar expansion. The algorithm was evaluated on the Bonn EEG dataset and the Freiburg long−term EEG dataset, and the former achieved a sensitivity and specificity of 99.32% and 99.31%, respectively. The mean sensitivity and specificity of this method for the 21 patients in the Freiburg dataset were 95.2% and 98.56%, respectively, with a false detection rate of 0.36/h. These results demonstrate the superior performance advantage of our algorithm and indicate its great research potential in epilepsy detection.
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Classification of EEG Signals for Prediction of Epileptic Seizures. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12147251] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Epilepsy is a common brain disorder that causes patients to face multiple seizures in a single day. Around 65 million people are affected by epilepsy worldwide. Patients with focal epilepsy can be treated with surgery, whereas generalized epileptic seizures can be managed with medications. It has been noted that in more than 30% of cases, these medications fail to control epileptic seizures, resulting in accidents and limiting the patient’s life. Predicting epileptic seizures in such patients prior to the commencement of an oncoming seizure is critical so that the seizure can be treated with preventive medicines before it occurs. Electroencephalogram (EEG) signals of patients recorded to observe brain electrical activity during a seizure can be quite helpful in predicting seizures. Researchers have proposed methods that use machine and/or deep learning techniques to predict epileptic seizures using scalp EEG signals; however, prediction of seizures with increased accuracy is still a challenge. Therefore, we propose a three-step approach. It includes preprocessing of scalp EEG signals with PREP pipeline, which is a more sophisticated alternative to basic notch filtering. This method uses a regression-based technique to further enhance the SNR, with a combination of handcrafted, i.e., statistical features such as temporal mean, variance, and skewness, and automated features using CNN, followed by classification of interictal state and preictal state segments using LSTM to predict seizures. We train and validate our proposed technique on the CHB-MIT scalp EEG dataset and achieve accuracy of 94%, sensitivity of 93.8%, and 91.2% specificity. The proposed technique achieves better sensitivity and specificity than existing methods.
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Engineering nonlinear epileptic biomarkers using deep learning and Benford's law. Sci Rep 2022; 12:5397. [PMID: 35354911 PMCID: PMC8967852 DOI: 10.1038/s41598-022-09429-w] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2021] [Accepted: 03/22/2022] [Indexed: 12/15/2022] Open
Abstract
In this study, we designed two deep neural networks to encode 16 features for early seizure detection in intracranial EEG and compared them and their frequency responses to 16 widely used engineered metrics to interpret their properties: epileptogenicity index (EI), phase locked high gamma (PLHG), time and frequency domain Cho Gaines distance (TDCG, FDCG), relative band powers, and log absolute band powers (from alpha, beta, theta, delta, low gamma, and high gamma bands). The deep learning models were pretrained for seizure identification on the time and frequency domains of 1 s, single-channel clips of 127 seizures (from 25 different subjects) using "leave-one-out" (LOO) cross validation. Each neural network extracted unique feature spaces that were interpreted using spectral power modulations before being used to train a Random Forest Classifier (RFC) for seizure identification. The Gini Importance of each feature was calculated from the pretrained RFC, enabling the most significant features (MSFs) for each task to be identified. The MSFs were extracted to train another RFC for UPenn and Mayo Clinic's Seizure Detection Kaggle Challenge. They obtained an AUC score of 0.93, demonstrating a transferable method to identify and interpret biomarkers for seizure detection.
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