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Wang C, Wang M, Zhu S, Wu X, Yang S, Yan Y, Wen Y. Multiple Ecological Niche Modeling Reveals Niche Conservatism and Divergence in East Asian Yew ( Taxus). PLANTS (BASEL, SWITZERLAND) 2025; 14:1094. [PMID: 40219162 PMCID: PMC11990852 DOI: 10.3390/plants14071094] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2025] [Revised: 03/28/2025] [Accepted: 03/28/2025] [Indexed: 04/14/2025]
Abstract
Understanding ecological niche evolution patterns is crucial for elucidating biogeographic history and guiding biodiversity conservation. Taxus is a Tertiary relict gymnosperm with 11 lineages mainly distributed across East Asia, spanning from tropical to subarctic regions. However, the spatiotemporal dynamics of its ecological niche evolution and the roles of ecological and geographical factors in lineage diversification, remain unclear. Using occurrence records, environmental data, and reconstructed phylogenies, we employed ensemble ecological niche models (eENMs), environmental principle components analysis (PCA-env), and phyloclimatic modeling to analyze niche similarity and evolution among 11 Taxus lineages. Based on reconstructed Bayesian trees and geographical distribution characteristics, we classified the eleven lineages into four clades: Northern (T. cuspidata), Central (T. chinensis, T. qinlingensis, and the Emei type), Western (T. wallichiana, T. florinii, and T. contorta), and Southern (T. calcicola, T. phytonii, T. mairei, and the Huangshan type). Orogenic activities and climate changes in the Tibetan Plateau since the Late Miocene likely facilitated the local adaptation of ancestral populations in Central China, the Hengduan Mountains, and the Yunnan-Guizhou Plateau, driving their expansion and diversification towards the west and south. Key environmental variables, including extreme temperature, temperature and precipitation variability, light, and altitude, were identified as major drivers of current niche divergence. Both niche conservatism and divergence were observed, with early conservatism followed by recent divergence. The Southern clade exhibits high heat and moisture tolerance, suggesting an adaptive shift, while the Central and Western clades retain ancestral drought and cold tolerance, displaying significant phylogenetic niche conservatism (PNC). We recommend prioritizing the conservation of T. qinlingensis, which exhibits the highest PNC level, particularly in the Qinling, Daba, and Taihang Mountains, which are highly degraded and vulnerable to future climate fluctuations.
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Affiliation(s)
- Chuncheng Wang
- College of Landscape and Architecture, Central South University of Forestry and Technology, Changsha 410004, China (S.Y.)
- Hunan Big Data Engineering Technology Research Center of Natural Protected Areas Landscape Resources, Changsha 410004, China
- Yuelushan Laboratory Carbon Sinks Forests Variety Innovation Center, Changsha 410004, China
| | - Minqiu Wang
- College of Landscape and Architecture, Central South University of Forestry and Technology, Changsha 410004, China (S.Y.)
- Hunan Big Data Engineering Technology Research Center of Natural Protected Areas Landscape Resources, Changsha 410004, China
- Yuelushan Laboratory Carbon Sinks Forests Variety Innovation Center, Changsha 410004, China
| | - Shanshan Zhu
- College of Landscape and Architecture, Central South University of Forestry and Technology, Changsha 410004, China (S.Y.)
| | - Xingtong Wu
- College of Landscape and Architecture, Central South University of Forestry and Technology, Changsha 410004, China (S.Y.)
- Hunan Big Data Engineering Technology Research Center of Natural Protected Areas Landscape Resources, Changsha 410004, China
- Yuelushan Laboratory Carbon Sinks Forests Variety Innovation Center, Changsha 410004, China
| | - Shaolong Yang
- College of Landscape and Architecture, Central South University of Forestry and Technology, Changsha 410004, China (S.Y.)
- Hunan Big Data Engineering Technology Research Center of Natural Protected Areas Landscape Resources, Changsha 410004, China
- Yuelushan Laboratory Carbon Sinks Forests Variety Innovation Center, Changsha 410004, China
| | - Yadan Yan
- College of Landscape and Architecture, Central South University of Forestry and Technology, Changsha 410004, China (S.Y.)
- Hunan Big Data Engineering Technology Research Center of Natural Protected Areas Landscape Resources, Changsha 410004, China
- Yuelushan Laboratory Carbon Sinks Forests Variety Innovation Center, Changsha 410004, China
| | - Yafeng Wen
- College of Landscape and Architecture, Central South University of Forestry and Technology, Changsha 410004, China (S.Y.)
- Hunan Big Data Engineering Technology Research Center of Natural Protected Areas Landscape Resources, Changsha 410004, China
- Yuelushan Laboratory Carbon Sinks Forests Variety Innovation Center, Changsha 410004, China
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Liu W, Fan R, Yang S, Chen S, Huang Y, Ji W. Carex parva and Carex scabrirostris adopt diverse response strategies to adapt to low-light conditions. FRONTIERS IN PLANT SCIENCE 2024; 15:1432539. [PMID: 39469055 PMCID: PMC11513331 DOI: 10.3389/fpls.2024.1432539] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/14/2024] [Accepted: 09/16/2024] [Indexed: 10/30/2024]
Abstract
Introduction In recent years, the visible light intensity of lawns has significantly decreased due to obstructions caused by urban shading objects. Carex has a competitive advantage over other turfgrass in low-light conditions and extensive management. Therefore, exploring their survival strategy in low-light environments is of great significance. Methods This study focuses on two species of Carex, Carex parva and Carex scabrirostris, and investigates their response to low-light conditions (150 μmol/m2/s) by simulating urban lawn conditions. Biomass allocation characteristics, leaf anatomical features, biochemical parameters, root morphology and photosynthetic parameters were measured. Results (a) Peroxidase activity, specific leaf area, and relative water content are key factors influencing the photosynthetic capacity of the two Carex species. (b) Under low-light conditions, photosynthetic parameters, leaf physiological indicators, and biomass allocation of the two Carex species were significantly affected (p<0.05). Both Carex species increased their investment in leaf biomass, maintained lateral root growth, and cleared reactive oxygen species to maintain their physiological balance. (c) In the simulated urban low-light environment, neither C. parva nor C. scabrirostris produced dauciform roots. Discussion In terms of response strategies, C. scabrirostris is a high-photosynthesis investing species with high productivity under low-light conditions, whereas C. parva exhibits minimal response, indicating a slow investment. C. scabrirostris has greater potential for application in low-light environments compared to C. parva. These results provide a theoretical basis for the cultivation and application of these two Carex species, as well as the expansion of turfgrass germplasm resources.
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Affiliation(s)
| | | | | | | | | | - Wenli Ji
- College of Landscape Architecture and Art, Northwest A&F University, Xianyang, China
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Cheng J, Guo F, Wang L, Li Z, Zhou C, Wang H, Liang W, Jiang X, Chen Y, Dong P. Evaluating the impact of ecological factors on the quality and habitat distribution of Lonicera japonica Flos using HPLC and the MaxEnt model. FRONTIERS IN PLANT SCIENCE 2024; 15:1397939. [PMID: 39166244 PMCID: PMC11333331 DOI: 10.3389/fpls.2024.1397939] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/08/2024] [Accepted: 07/12/2024] [Indexed: 08/22/2024]
Abstract
Introduction The quality of traditional Chinese medicine is based on the content of their secondary metabolites, which vary with habitat adaptation and ecological factors. This study focuses on Lonicera japonica Flos (LJF), a key traditional herbal medicine, and aims to evaluate how ecological factors impact its quality. Methods We developed a new evaluation method combining high-performance liquid chromatography (HPLC) fingerprinting technology and MaxEnt models to assess the effects of ecological factors on LJF quality. The MaxEnt model was used to predict suitable habitats for current and future scenarios, while HPLC was employed to analyze the contents of key compounds. We also used ArcGIS for spatial analysis to create a quality zoning map. Results The analysis identified 21 common chromatographic peaks, with significant variations in the contents of Hyperoside, Rutin, Chlorogenic acid, Cynaroside, and Isochlorogenic acid A across different habitats. Key environmental variables influencing LJF distribution were identified, including temperature, precipitation, and elevation. The current suitable habitats primarily include regions south of the Yangtze River. Under future climate scenarios, suitable areas are expected to shift, with notable expansions in southern Gansu, southeastern Tibet, and southern Liaoning. The spatial distribution maps revealed that high-quality LJF is predominantly found in central and southern Hebei, northern Henan, central Shandong, central Sichuan, southern Guangdong, and Taiwan. Discussion The study indicates that suitable growth areas can promote the accumulation of certain secondary metabolites in plants, as the accumulation of these metabolites varies. The results underscore the necessity of optimizing quality based on cultivation practices. The integration of HPLC fingerprinting technology and the MaxEnt model provides valuable insights for the conservation and cultivation of herbal resources, offering a new perspective on evaluating the impact of ecological factors on the quality of traditional Chinese medicines.
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Affiliation(s)
- Jiali Cheng
- College of Agronomy, College of Life Science and Technology, Gansu Provincial Key Lab of Good Agricultural Production for Traditional Chinese Medicines, Gansu Provincial Engineering Research Centre for Medical Plant Cultivation and Breeding, Gansu Provincial Key Lab of Arid Land Crop Science, Gansu Key Lab of Crop Genetic and Germplasm Enhancement, Gansu Agricultural University, Lanzhou, China
| | - Fengxia Guo
- College of Agronomy, College of Life Science and Technology, Gansu Provincial Key Lab of Good Agricultural Production for Traditional Chinese Medicines, Gansu Provincial Engineering Research Centre for Medical Plant Cultivation and Breeding, Gansu Provincial Key Lab of Arid Land Crop Science, Gansu Key Lab of Crop Genetic and Germplasm Enhancement, Gansu Agricultural University, Lanzhou, China
| | - Liyang Wang
- College of Agronomy, College of Life Science and Technology, Gansu Provincial Key Lab of Good Agricultural Production for Traditional Chinese Medicines, Gansu Provincial Engineering Research Centre for Medical Plant Cultivation and Breeding, Gansu Provincial Key Lab of Arid Land Crop Science, Gansu Key Lab of Crop Genetic and Germplasm Enhancement, Gansu Agricultural University, Lanzhou, China
| | - Zhigang Li
- Longxi County Agricultural Technology Extension Center, Dingxi, Gansu, China
| | - Chunyan Zhou
- School of Economics and Management, Hexi University, Zhangye, China
| | - Hongyan Wang
- College of Agronomy, College of Life Science and Technology, Gansu Provincial Key Lab of Good Agricultural Production for Traditional Chinese Medicines, Gansu Provincial Engineering Research Centre for Medical Plant Cultivation and Breeding, Gansu Provincial Key Lab of Arid Land Crop Science, Gansu Key Lab of Crop Genetic and Germplasm Enhancement, Gansu Agricultural University, Lanzhou, China
| | - Wei Liang
- College of Agronomy, College of Life Science and Technology, Gansu Provincial Key Lab of Good Agricultural Production for Traditional Chinese Medicines, Gansu Provincial Engineering Research Centre for Medical Plant Cultivation and Breeding, Gansu Provincial Key Lab of Arid Land Crop Science, Gansu Key Lab of Crop Genetic and Germplasm Enhancement, Gansu Agricultural University, Lanzhou, China
| | - Xiaofeng Jiang
- Dryland Agriculture Institute of Plant Protection, Gansu Academy of Agricultural Sciences, Lanzhou, China
| | - Yuan Chen
- College of Agronomy, College of Life Science and Technology, Gansu Provincial Key Lab of Good Agricultural Production for Traditional Chinese Medicines, Gansu Provincial Engineering Research Centre for Medical Plant Cultivation and Breeding, Gansu Provincial Key Lab of Arid Land Crop Science, Gansu Key Lab of Crop Genetic and Germplasm Enhancement, Gansu Agricultural University, Lanzhou, China
| | - Pengbin Dong
- College of Agronomy, College of Life Science and Technology, Gansu Provincial Key Lab of Good Agricultural Production for Traditional Chinese Medicines, Gansu Provincial Engineering Research Centre for Medical Plant Cultivation and Breeding, Gansu Provincial Key Lab of Arid Land Crop Science, Gansu Key Lab of Crop Genetic and Germplasm Enhancement, Gansu Agricultural University, Lanzhou, China
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Hosseini N, Ghorbanpour M, Mostafavi H. The influence of climate change on the future distribution of two Thymus species in Iran: MaxEnt model-based prediction. BMC PLANT BIOLOGY 2024; 24:269. [PMID: 38605338 PMCID: PMC11007882 DOI: 10.1186/s12870-024-04965-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2023] [Accepted: 03/30/2024] [Indexed: 04/13/2024]
Abstract
Within a few decades, the species habitat was reshaped at an alarming rate followed by climate change, leading to mass extinction, especially for sensitive species. Species distribution models (SDMs), which estimate both present and future species distribution, have been extensively developed to investigate the impacts of climate change on species distribution and assess habitat suitability. In the West Asia essential oils of T. daenensis and T. kotschyanus include high amounts of thymol and carvacrol and are commonly used as herbal tea, spice, flavoring agents and medicinal plants. Therefore, this study aimed to model these Thymus species in Iran using the MaxEnt model under two representative concentration pathways (RCP 4.5 and RCP 8.5) for the years 2050 and 2070. The findings revealed that the mean temperature of the warmest quarter (bio10) was the most significant variable affecting the distribution of T. daenensis. In the case of T. kotschyanus, slope percentage was the primary influencing factor. The MaxEnt modeling also demonstrated excellent performance, as indicated by all the Area Under the Curve (AUC) values exceeding 0.9. Moreover, based on the projections, the two mentioned species are expected to undergo negative area changes in the coming years. These results can serve as a valuable achievement for developing adaptive management strategies aimed at enhancing protection and sustainable utilization in the context of global climate change.
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Affiliation(s)
- Naser Hosseini
- Department of Medicinal Plants, Faculty of Agriculture and Natural Resources, Arak University, Arak, 38156-8-8349, Iran.
| | - Mansour Ghorbanpour
- Department of Medicinal Plants, Faculty of Agriculture and Natural Resources, Arak University, Arak, 38156-8-8349, Iran.
| | - Hossein Mostafavi
- Department of Biodiversity and Ecosystem Management, Environmental Sciences Research Institute, Shahid Beheshti University, Tehran, Iran
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Xiao F, Liu Q, Qin Y. Predicting the Potential Distribution of Haloxylon ammodendron under Climate Change Scenarios Using Machine Learning of a Maximum Entropy Model. BIOLOGY 2023; 13:3. [PMID: 38275724 PMCID: PMC11154351 DOI: 10.3390/biology13010003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Revised: 12/13/2023] [Accepted: 12/16/2023] [Indexed: 01/27/2024]
Abstract
Haloxylon ammodendron (H. ammodendron) is a second-class protected plant of national significance in China that is known for its growth in desert and semidesert regions, where it serves as a desert ecosystem guardian by playing a substantial role in maintaining ecosystem structure and function. The changing global climate has substantially altered the growth conditions for H. ammodendron. This study focuses on identifying the key variables influencing the distribution of H. ammodendron and determining their potential impact on future distribution. We employed the Maxent model to evaluate the current climate suitability for H. ammodendron distribution and to project its future changes across various shared socioeconomic pathway (SSP) scenarios. Our findings indicate that precipitation during the warmest quarter and precipitation during the wettest month are the most influential variables affecting the potentially suitable habitats of H. ammodendron. The highly suitable habitat area for H. ammodendron currently covers approximately 489,800 km2. The Maxent model forecasts an expansion of highly suitable H. ammodendron habitat under all future SSP scenarios, with the extent of unsuitable areas increasing with greater global warming. The increased highly suitable habitats range from 40% (SSP585) to 80% (SSP126) by the 2070s (2060-2080). Furthermore, our results indicate a continued expansion of desertification areas due to global warming, highlighting the significant role of H. ammodendron in maintaining desert ecosystem stability. This study offers valuable insights into biodiversity preservation and ecological protection in the context of future climate change scenarios.
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Affiliation(s)
- Fengjin Xiao
- National Climate Center, Chinese Meteorological Administration, Beijing 100081, China; (Q.L.); (Y.Q.)
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Jiang X, Liu WJ, Zhu YZ, Cao YT, Yang XM, Geng Y, Zhang FJ, Sun RQ, Jia RW, Yan CL, Zhang YY, Li ZH. Impacts of Climate Changes on Geographic Distribution of Primula filchnerae, an Endangered Herb in China. PLANTS (BASEL, SWITZERLAND) 2023; 12:3561. [PMID: 37896023 PMCID: PMC10610284 DOI: 10.3390/plants12203561] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2023] [Revised: 10/08/2023] [Accepted: 10/12/2023] [Indexed: 10/29/2023]
Abstract
Primula filchnerae, an endangered plant endemic to China, has drawn people's attention in recent years due to its ornamental value in flower. It was rarely recorded since being described in 1902, but it was rediscovered in 2009 and is now known from a limited number of sites located in Hubei and Shaanxi Provinces. Since the species is still poorly known, a number of unanswered questions arise related to it: How has P. filchnerae responded to past climate change and how might it respond in the future? Why was P. filchmerae so rarely collected during the past century? We assembled geographic coordinates for P. filchnerae through the field surveys and website searches, and then used a maximum entropy model (MaxEnt) to simulate its potential suitable distribution in six periods with varied carbon emission levels by combining bioclimatic and environmental factors. MaxEnt showed that Min Temperature of the Coldest Month (bio6) and Precipitation of the Coldest Quarter (bio19) affected P. filchnerae's distribution most, with an aggregate contribution >60% and suitable ranges above -5 °C and below 40 mm, respectively. We also analyzed potential habitat distribution in various periods with differing impacts of climate change compared to today's suitable habitats, and in most cases, Shaanxi and Sichuan remained the most stable areas and with possible expansion to the north under various carbon emission scenarios, but the 2050s SSP5-8.5 scenario may be an exception. Moreover, we used MaxEnt to evaluate population shifts, with various scenarios indicating that geometric center would be concentrated in Sichuan Province in China. Finally, conservation strategies are suggested, including the creation of protected areas, long-term monitoring, raising public awareness of plant conservation, situ conservation measures, assisted migration, and species introduction. This study demonstrates how P. filchnerae may have adapted to changes in different periods and provides a scientific basis for germplasm conservation and management.
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Affiliation(s)
| | | | | | | | | | | | | | | | | | | | | | - Zhong-Hu Li
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an 710069, China; (X.J.); (W.-J.L.); (Y.-T.C.); (X.-M.Y.); (Y.G.); (F.-J.Z.); (R.-Q.S.)
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