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Morganti D, Longo V, Leonardi AA, Irrera A, Colombo P, Fazio B. First Vibrational Fingerprint of Parietaria judaica Protein via Surface-Enhanced Raman Spectroscopy. BIOSENSORS 2025; 15:182. [PMID: 40136979 PMCID: PMC11940344 DOI: 10.3390/bios15030182] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2025] [Revised: 03/07/2025] [Accepted: 03/11/2025] [Indexed: 03/27/2025]
Abstract
Accurate identification and characterization of allergenic proteins at the molecular level are essential for pinpointing the specific protein structures responsible for allergic reactions, thus advancing the development of precise diagnostic tests. Significant efforts have been focused on novel experimental techniques aimed at deepening the understanding of the underlying molecular mechanisms of these reactions. In this work, we show, for the first time to our knowledge, the unique Raman fingerprint of three Parietaria judaica (Par j) allergenic proteins. These proteins are typically present in pollen and are known to trigger severe respiratory diseases. In our research, we further exploited the surface-enhanced Raman scattering (SERS) effect from an Ag dendrite substrate. This approach provided better discrimination and a comprehensive analysis of the proteins Par j 1, 2, and 4 in hydration conditions, enabling rapid differentiation between them through a spectroscopic study.
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Affiliation(s)
- Dario Morganti
- CNR IMM-ME, Institute for Microelectronics and Microsystems, Viale F.S. d’Alcontres 31, I-98166 Messina, Italy; (D.M.); (A.I.)
- CNR DSFTM, Department of Physical Sciences and Technologies of Matter, Piazzale Aldo Moro, 7, I-00185 Roma, Italy
| | - Valeria Longo
- CNR IRIB-PA, Institute for Biomedical Research and Innovation, Via U. La Malfa 153, I-90146 Palermo, Italy;
| | - Antonio Alessio Leonardi
- Department of Chemical, Biological, Pharmaceutical, and Environmental Sciences (ChiBioFarAm), University of Messina, Viale F.S. d’Alcontres 31, I-98166 Messina, Italy;
| | - Alessia Irrera
- CNR IMM-ME, Institute for Microelectronics and Microsystems, Viale F.S. d’Alcontres 31, I-98166 Messina, Italy; (D.M.); (A.I.)
| | - Paolo Colombo
- CNR IRIB-PA, Institute for Biomedical Research and Innovation, Via U. La Malfa 153, I-90146 Palermo, Italy;
| | - Barbara Fazio
- CNR IMM-ME, Institute for Microelectronics and Microsystems, Viale F.S. d’Alcontres 31, I-98166 Messina, Italy; (D.M.); (A.I.)
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Grewling Ł, Ribeiro H, Antunes C, Apangu GP, Çelenk S, Costa A, Eguiluz-Gracia I, Galveias A, Gonzalez Roldan N, Lika M, Magyar D, Martinez-Bracero M, Ørby P, O'Connor D, Penha AM, Pereira S, Pérez-Badia R, Rodinkova V, Xhetani M, Šauliene I, Skjøth CA. Outdoor airborne allergens: Characterization, behavior and monitoring in Europe. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 905:167042. [PMID: 37709071 DOI: 10.1016/j.scitotenv.2023.167042] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2023] [Revised: 08/23/2023] [Accepted: 09/11/2023] [Indexed: 09/16/2023]
Abstract
Aeroallergens or inhalant allergens, are proteins dispersed through the air and have the potential to induce allergic conditions such as rhinitis, conjunctivitis, and asthma. Outdoor aeroallergens are found predominantly in pollen grains and fungal spores, which are allergen carriers. Aeroallergens from pollen and fungi have seasonal emission patterns that correlate with plant pollination and fungal sporulation and are strongly associated with atmospheric weather conditions. They are released when allergen carriers come in contact with the respiratory system, e.g. the nasal mucosa. In addition, due to the rupture of allergen carriers, airborne allergen molecules may be released directly into the air in the form of micronic and submicronic particles (cytoplasmic debris, cell wall fragments, droplets etc.) or adhered onto other airborne particulate matter. Therefore, aeroallergen detection strategies must consider, in addition to the allergen carriers, the allergen molecules themselves. This review article aims to present the current knowledge on inhalant allergens in the outdoor environment, their structure, localization, and factors affecting their production, transformation, release or degradation. In addition, methods for collecting and quantifying aeroallergens are listed and thoroughly discussed. Finally, the knowledge gaps, challenges and implications associated with aeroallergen analysis are described.
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Affiliation(s)
- Łukasz Grewling
- Laboratory of Aerobiology, Department of Systematic and Environmental Botany, Faculty of Biology, Adam Mickiewicz University, Poznań, Poland.
| | - Helena Ribeiro
- Department of Geosciences, Environment and Spatial Plannings of the Faculty of Sciences, University of Porto and Earth Sciences Institute (ICT), Portugal
| | - Celia Antunes
- Department of Medical and Health Sciences, School of Health and Human Development & ICT-Institute of Earth Sciences, IIFA, University of Évora, 7000-671 Évora, Portugal
| | | | - Sevcan Çelenk
- Department of Biology, Faculty of Arts and Sciences, Bursa Uludag University, Bursa, Turkey
| | - Ana Costa
- Department of Medical and Health Sciences, School of Health and Human Development & ICT-Institute of Earth Sciences, IIFA, University of Évora, 7000-671 Évora, Portugal
| | - Ibon Eguiluz-Gracia
- Allergy Unit, Hospital Regional Universitario de Malaga, Malaga 29010, Spain
| | - Ana Galveias
- Department of Medical and Health Sciences, School of Health and Human Development & ICT-Institute of Earth Sciences, IIFA, University of Évora, 7000-671 Évora, Portugal
| | - Nestor Gonzalez Roldan
- Group of Biofunctional Metabolites and Structures, Priority Research Area Chronic Lung Diseases, Research Center Borstel, Leibniz Lung Center, Member of the German Center for Lung Research (DZL), Airway Research Center North (ARCN), Borstel, Germany; Pollen Laboratory, Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, Sweden
| | - Mirela Lika
- Department of Biology, Faculty of Natural Sciences, University of Tirana, Tirana, Albania
| | - Donát Magyar
- National Center for Public Health and Pharmacy, Budapest, Hungary
| | | | - Pia Ørby
- Department of Environmental Science, Danish Big Data Centre for Environment and Health (BERTHA) Aarhus University, Aarhus, Denmark
| | - David O'Connor
- School of Chemical Sciences, Dublin City University, Dublin D09 E432, Ireland
| | - Alexandra Marchã Penha
- Water Laboratory, School of Sciences and Technology, ICT-Institute of Earth Sciences, IIFA, University of Évora. 7000-671 Évora, Portugal
| | - Sónia Pereira
- Department of Geosciences, Environment and Spatial Plannings of the Faculty of Sciences, University of Porto and Earth Sciences Institute (ICT), Portugal
| | - Rosa Pérez-Badia
- Institute of Environmental Sciences, University of Castilla-La Mancha, 45071 Toledo, Spain
| | | | - Merita Xhetani
- Department of Biology, Faculty of Natural Sciences, University of Tirana, Tirana, Albania
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郝 建, 于 东, 谢 百, 张 婧, 高 露, 张 敏, 何 婵, 冯 彦. [A study of airborne pollen monitoring and its connection with allergic rhinitis visits in Taiyuan over the summer and autumn seasons]. LIN CHUANG ER BI YAN HOU TOU JING WAI KE ZA ZHI = JOURNAL OF CLINICAL OTORHINOLARYNGOLOGY, HEAD, AND NECK SURGERY 2023; 37:452-456. [PMID: 37253519 PMCID: PMC10495807 DOI: 10.13201/j.issn.2096-7993.2023.06.009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Received: 03/20/2023] [Revised: 04/04/2023] [Indexed: 06/01/2023]
Abstract
Objective:To explore the distribution of airborne pollen in summer and autumn in Taiyuan, analyze the correlation between pollen characteristics, meteorological factors and allergic sensitization, and provide for the prevention and treatment of allergic diseases in this. Methods:The gravity sedimentation method was used to investigate the types, quantities and dispersion patterns of airborne pollen in Taiyuan City from July 21, 2022 to October 20, 2022. he meteorological and patient information was collected during the same period SPSS 26.0 software. Results:①A total of 17 118 pollen grains were collected, and identified as 14 families, 10 genera, and 4 species. The peak period for pollen dispersal in summer and autumn in Taiyuan City from late August to early September. airborne pollen Artemisia(66.62%), Cannabis/Humulus(17.79%), Sophora japonica(8.18%), Chenopodiaceae/Amaranthaceae(2.83%), Gramineae(2.11%). ②The concentration of airborne pollen in Taiyuan City positively correlated with the average temperature(5-20℃) and maximum temperature(11-30℃) within a certain range(r=0.547, 0.315, P<0.05). ③The content of airborne pollen in Taiyuan City positively correlated with the number of visits and allergen positive rate of patients with allergic rhinitis(AR) in our hospital(r=0.702, 0.747, P<0.05). Conclusion:The peak period for airborne pollen dispersal during the summer and autumn seasons in Taiyuan City from late August to early September. The dominant pollen is Artemisia, Cannabis/Humulus, Sophora japonica, Chenopodiaceae/Amaranthaceae, Gramineae, and the absolute advantage pollen is Artemisia. Meteorological factors pollen content. Within a certain range, temperature the diffusion and transportation of pollen. The number of pollen grains the number of visits, which can serve as an environmental warning indicator for AR patients to take preventive, thereby reducing the risk of allergies.
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Affiliation(s)
- 建利 郝
- 山西医科大学第一医院耳鼻咽喉头颈外科(太原,030001)Department of Otolaryngology Head and Neck Surgery, First Hospital of Shanxi Medical University, Taiyuan, 030001, China
| | - 东东 于
- 山西医科大学第一医院耳鼻咽喉头颈外科(太原,030001)Department of Otolaryngology Head and Neck Surgery, First Hospital of Shanxi Medical University, Taiyuan, 030001, China
| | - 百灵 谢
- 山西医科大学第一医院耳鼻咽喉头颈外科(太原,030001)Department of Otolaryngology Head and Neck Surgery, First Hospital of Shanxi Medical University, Taiyuan, 030001, China
| | - 婧 张
- 山西医科大学第一医院耳鼻咽喉头颈外科(太原,030001)Department of Otolaryngology Head and Neck Surgery, First Hospital of Shanxi Medical University, Taiyuan, 030001, China
| | - 露 高
- 山西医科大学第一医院耳鼻咽喉头颈外科(太原,030001)Department of Otolaryngology Head and Neck Surgery, First Hospital of Shanxi Medical University, Taiyuan, 030001, China
| | - 敏 张
- 山西医科大学第一医院耳鼻咽喉头颈外科(太原,030001)Department of Otolaryngology Head and Neck Surgery, First Hospital of Shanxi Medical University, Taiyuan, 030001, China
| | - 婵 何
- 山西医科大学第一医院耳鼻咽喉头颈外科(太原,030001)Department of Otolaryngology Head and Neck Surgery, First Hospital of Shanxi Medical University, Taiyuan, 030001, China
| | - 彦 冯
- 山西医科大学第一医院耳鼻咽喉头颈外科(太原,030001)Department of Otolaryngology Head and Neck Surgery, First Hospital of Shanxi Medical University, Taiyuan, 030001, China
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Polling M, Li C, Cao L, Verbeek F, de Weger LA, Belmonte J, De Linares C, Willemse J, de Boer H, Gravendeel B. Neural networks for increased accuracy of allergenic pollen monitoring. Sci Rep 2021; 11:11357. [PMID: 34059743 PMCID: PMC8166864 DOI: 10.1038/s41598-021-90433-x] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2020] [Accepted: 05/04/2021] [Indexed: 11/25/2022] Open
Abstract
Monitoring of airborne pollen concentrations provides an important source of information for the globally increasing number of hay fever patients. Airborne pollen is traditionally counted under the microscope, but with the latest developments in image recognition methods, automating this process has become feasible. A challenge that persists, however, is that many pollen grains cannot be distinguished beyond the genus or family level using a microscope. Here, we assess the use of Convolutional Neural Networks (CNNs) to increase taxonomic accuracy for airborne pollen. As a case study we use the nettle family (Urticaceae), which contains two main genera (Urtica and Parietaria) common in European landscapes which pollen cannot be separated by trained specialists. While pollen from Urtica species has very low allergenic relevance, pollen from several species of Parietaria is severely allergenic. We collect pollen from both fresh as well as from herbarium specimens and use these without the often used acetolysis step to train the CNN model. The models show that unacetolyzed Urticaceae pollen grains can be distinguished with > 98% accuracy. We then apply our model on before unseen Urticaceae pollen collected from aerobiological samples and show that the genera can be confidently distinguished, despite the more challenging input images that are often overlain by debris. Our method can also be applied to other pollen families in the future and will thus help to make allergenic pollen monitoring more specific.
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Affiliation(s)
| | - Chen Li
- Leiden Institute of Advanced Computer Science (LIACS), Leiden, The Netherlands
| | - Lu Cao
- Leiden Institute of Advanced Computer Science (LIACS), Leiden, The Netherlands
| | - Fons Verbeek
- Leiden Institute of Advanced Computer Science (LIACS), Leiden, The Netherlands
| | - Letty A de Weger
- Department of Pulmonology, Leiden University Medical Center, Leiden, The Netherlands
| | - Jordina Belmonte
- Institute of Environmental Sciences and Technology (ICTA-UAB), The Universitat Autònoma de Barcelona, Bellaterra, Cerdanyola del Vallès, Spain
| | - Concepción De Linares
- Institute of Environmental Sciences and Technology (ICTA-UAB), The Universitat Autònoma de Barcelona, Bellaterra, Cerdanyola del Vallès, Spain
| | - Joost Willemse
- Microbial Sciences, Institute of Biology, Leiden, The Netherlands
| | - Hugo de Boer
- Natural History Museum, University of Oslo, Oslo, Norway
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