1
|
Neyman V, Quicray M, Francis F, Michaux C. Toxicological, biochemical, and in silico investigations of three trehalase inhibitors for new ways to control aphids. ARCHIVES OF INSECT BIOCHEMISTRY AND PHYSIOLOGY 2024; 115:e22112. [PMID: 38605672 DOI: 10.1002/arch.22112] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2024] [Revised: 04/03/2024] [Accepted: 04/04/2024] [Indexed: 04/13/2024]
Abstract
Insect trehalases have been identified as promising new targets for pest control. These key enzymes are involved in trehalose hydrolysis and plays an important role in insect growth and development. In this contribution, plant and microbial compounds, namely validamycin A, amygdalin, and phloridzin, were evaluated for their effect, through trehalase inhibition, on Acyrthosiphon pisum aphid. The latter is part of the Aphididae family, main pests as phytovirus vectors and being very harmful for crops. Validamycin A was confirmed as an excellent trehalase inhibitor with an half maximal inhibitory concentration and inhibitor constant of 2.2 × 10-7 and 5 × 10-8 M, respectively, with a mortality rate of ~80% on a A. pisum population. Unlike validamycin A, the insect lethal efficacy of amygdalin and phloridzin did not correspond to their trehalase inhibition, probably due to their hydrolysis by insect β-glucosidases. Our docking studies showed that none of the three compounds can bind to the trehalase active site, unlike their hydrolyzed counterparts, that is, validoxylamine A, phloretin, and prunasin. Validoxylamine A would be by far the best trehalase binder, followed by phloretin and prunasin.
Collapse
Affiliation(s)
- Virgile Neyman
- Laboratoire de Chimie Physique des Biomolécules, UCPTS, University of Namur, Namur, Belgium
- Functional and Evolutionary Entomology, TERRA, Gembloux Agro-Bio Tech, University of Liège, Gembloux, Belgium
- Namur Institute of Structures Matter (NISM), University of Namur, Namur, Belgium
- Evolution and Ecophysiology Group, TERRA, Gembloux Agro-Bio Tech, University of Liège, Gembloux, Belgium
| | - Maude Quicray
- Institute of Life Earth and Environment (ILEE), University of Namur, Namur, Belgium
| | - Frédéric Francis
- Functional and Evolutionary Entomology, TERRA, Gembloux Agro-Bio Tech, University of Liège, Gembloux, Belgium
| | - Catherine Michaux
- Laboratoire de Chimie Physique des Biomolécules, UCPTS, University of Namur, Namur, Belgium
- Namur Institute of Structures Matter (NISM), University of Namur, Namur, Belgium
- Namur Research, Institute for Life Sciences (NARILIS), University of Namur, Namur, Belgium
| |
Collapse
|
2
|
Shrestha P, Karmacharya J, Han SR, Lee JH, Oh TJ. Elucidation of bacterial trehalose-degrading trehalase and trehalose phosphorylase: physiological significance and its potential applications. Glycobiology 2024; 34:cwad084. [PMID: 37847605 DOI: 10.1093/glycob/cwad084] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2023] [Revised: 10/11/2023] [Accepted: 10/11/2023] [Indexed: 10/19/2023] Open
Abstract
Bacteria possess diverse metabolic and genetic processes, resulting in the inability of certain bacteria to degrade trehalose. However, some bacteria do have the capability to degrade trehalose, utilizing it as a carbon source, and for defense against environmental stress. Trehalose, a disaccharide, serves as a carbon source for many bacteria, including some that are vital for pathogens. The degradation of trehalose is carried out by enzymes like trehalase (EC 3.2.1.28) and trehalose phosphorylase (EC 2.4.1.64/2.4.1.231), which are classified under the glycoside hydrolase families GH37, GH15, and GH65. Numerous studies and reports have explored the physiological functions, recombinant expression, enzymatic characteristics, and potential applications of these enzymes. However, further research is still being conducted to understand their roles in bacteria. This review aims to provide a comprehensive summary of the current understanding of trehalose degradation pathways in various bacteria, focusing on three key areas: (i) identifying different trehalose-degrading enzymes in Gram-positive and Gram-negative bacteria, (ii) elucidating the mechanisms employed by trehalose-degrading enzymes belonging to the glycoside hydrolases GH37, GH15, and GH65, and (iii) discussing the potential applications of these enzymes in different sectors. Notably, this review emphasizes the bacterial trehalose-degrading enzymes, specifically trehalases (GH37, GH15, and GH65) and trehalose phosphorylases (GH65), in both Gram-positive and Gram-negative bacteria, an aspect that has not been highlighted before.
Collapse
Affiliation(s)
- Prasansah Shrestha
- Department of Life Sciences and Biochemical Engineering, Graduate School, Sun Moon University, 70 Sunmoon-ro 221beon-gil, Tangjeong-myeon, Asan-si, Chungcheongnam-do, 31460, South Korea
| | - Jayram Karmacharya
- Department of Life Sciences and Biochemical Engineering, Graduate School, Sun Moon University, 70 Sunmoon-ro 221beon-gil, Tangjeong-myeon, Asan-si, Chungcheongnam-do, 31460, South Korea
| | - So-Ra Han
- Department of Life Sciences and Biochemical Engineering, Graduate School, Sun Moon University, 70 Sunmoon-ro 221beon-gil, Tangjeong-myeon, Asan-si, Chungcheongnam-do, 31460, South Korea
- Genome-based Bio-IT Convergence Institute, 70 Sunmoon-ro 221beon-gil, Tangjeong-myeon Asan-si, Chungcheongnam-do, 31460, South Korea
| | - Jun Hyuck Lee
- Research Unit of Cryogenic Novel Materials, Korea Polar Research Institute, 26 Songdomirae-ro, Yeonsu-gu, Incheon 21990, South Korea
| | - Tae-Jin Oh
- Department of Life Sciences and Biochemical Engineering, Graduate School, Sun Moon University, 70 Sunmoon-ro 221beon-gil, Tangjeong-myeon, Asan-si, Chungcheongnam-do, 31460, South Korea
- Genome-based Bio-IT Convergence Institute, 70 Sunmoon-ro 221beon-gil, Tangjeong-myeon Asan-si, Chungcheongnam-do, 31460, South Korea
- Department of Pharmaceutical Engineering and Biotechnology, Sun Moon University, 70 Sunmoon-ro 221beon-gil, Tangjeong-myeon, Asan-si, Chungcheongnam-do 31460, South Korea
| |
Collapse
|
3
|
Chen L, Ma X, Sun T, Zhu QH, Feng H, Li Y, Liu F, Zhang X, Sun J, Li Y. VdPT1 Encoding a Neutral Trehalase of Verticillium dahliae Is Required for Growth and Virulence of the Pathogen. Int J Mol Sci 2023; 25:294. [PMID: 38203466 PMCID: PMC10778863 DOI: 10.3390/ijms25010294] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2023] [Revised: 12/12/2023] [Accepted: 12/16/2023] [Indexed: 01/12/2024] Open
Abstract
Verticillum dahliae is a soil-borne phytopathogenic fungus causing destructive Verticillium wilt disease. We previously found a trehalase-encoding gene (VdPT1) in V. dahliae being significantly up-regulated after sensing root exudates from a susceptible cotton variety. In this study, we characterized the function of VdPT1 in the growth and virulence of V. dahliae using its deletion-mutant strains. The VdPT1 deletion mutants (ΔVdPT1) displayed slow colony expansion and mycelial growth, reduced conidial production and germination rate, and decreased mycelial penetration ability and virulence on cotton, but exhibited enhanced stress resistance, suggesting that VdPT1 is involved in the growth, pathogenesis, and stress resistance of V. dahliae. Host-induced silencing of VdPT1 in cotton reduced fungal biomass and enhanced cotton resistance against V. dahliae. Comparative transcriptome analysis between wild-type and mutant identified 1480 up-regulated and 1650 down-regulated genes in the ΔVdPT1 strain. Several down-regulated genes encode plant cell wall-degrading enzymes required for full virulence of V. dahliae to cotton, and down-regulated genes related to carbon metabolism, DNA replication, and amino acid biosynthesis seemed to be responsible for the decreased growth of the ΔVdPT1 strain. In contrast, up-regulation of several genes related to glycerophospholipid metabolism in the ΔVdPT1 strain enhanced the stress resistance of the mutated strain.
Collapse
Affiliation(s)
- Lihua Chen
- The Key Laboratory of Oasis Eco-Agriculture, Agriculture College, Shihezi University, Shihezi 832000, China; (L.C.); (X.M.); (T.S.); (Y.L.); (F.L.); (X.Z.)
| | - Xiaohu Ma
- The Key Laboratory of Oasis Eco-Agriculture, Agriculture College, Shihezi University, Shihezi 832000, China; (L.C.); (X.M.); (T.S.); (Y.L.); (F.L.); (X.Z.)
| | - Tiange Sun
- The Key Laboratory of Oasis Eco-Agriculture, Agriculture College, Shihezi University, Shihezi 832000, China; (L.C.); (X.M.); (T.S.); (Y.L.); (F.L.); (X.Z.)
| | - Qian-Hao Zhu
- CSIRO Agriculture and Food, GPO Box 1700, Canberra 2601, Australia;
| | - Hongjie Feng
- State Key Laboratory of Cotton Biology, Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Anyang 455000, China;
| | - Yongtai Li
- The Key Laboratory of Oasis Eco-Agriculture, Agriculture College, Shihezi University, Shihezi 832000, China; (L.C.); (X.M.); (T.S.); (Y.L.); (F.L.); (X.Z.)
| | - Feng Liu
- The Key Laboratory of Oasis Eco-Agriculture, Agriculture College, Shihezi University, Shihezi 832000, China; (L.C.); (X.M.); (T.S.); (Y.L.); (F.L.); (X.Z.)
| | - Xinyu Zhang
- The Key Laboratory of Oasis Eco-Agriculture, Agriculture College, Shihezi University, Shihezi 832000, China; (L.C.); (X.M.); (T.S.); (Y.L.); (F.L.); (X.Z.)
| | - Jie Sun
- The Key Laboratory of Oasis Eco-Agriculture, Agriculture College, Shihezi University, Shihezi 832000, China; (L.C.); (X.M.); (T.S.); (Y.L.); (F.L.); (X.Z.)
| | - Yanjun Li
- The Key Laboratory of Oasis Eco-Agriculture, Agriculture College, Shihezi University, Shihezi 832000, China; (L.C.); (X.M.); (T.S.); (Y.L.); (F.L.); (X.Z.)
| |
Collapse
|
4
|
Jiang X, Zhong F, Chen Y, Shi D, Chao L, Yu L, He B, Xu C, Wu Y, Tang B, Duan H, Wang S. Novel compounds ZK-PI-5 and ZK-PI-9 regulate the reproduction of Spodoptera frugiperda (Lepidoptera: Noctuidae), with insecticide potential. JOURNAL OF ECONOMIC ENTOMOLOGY 2023; 116:1850-1861. [PMID: 37478561 DOI: 10.1093/jee/toad140] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2023] [Revised: 06/20/2023] [Accepted: 07/13/2023] [Indexed: 07/23/2023]
Abstract
Trehalase inhibitors prevent trehalase from breaking down trehalose to provide energy. Chitinase inhibitors inhibit chitinase activity affecting insect growth and development. This is an important tool for the investigation of regulation of trehalose metabolism and chitin metabolism in insect reproduction. There are few studies on trehalase or chitinase inhibitors' regulation of insect reproduction. In this study, ZK-PI-5 and ZK-PI-9 were shown to have a significant inhibitory effect on the trehalase, and ZK-PI-9 significantly inhibited chitinase activity in female pupae. We investigated the reproduction regulation of Spodoptera frugiperda using these new inhibitors and evaluated their potential as new insecticides. Compounds ZK-PI-5 and ZK-PI-9 were injected into the female pupae, and the control group was injected with solvent (2% DMSO). The results showed that the emergence failure rate for pupae treated with inhibitors increased dramatically and aberrant phenotypes such as difficulty in wings spreading occurred. The oviposition period and longevity of female adults in the treated group were significantly shorter than those in the control group, and the ovaries developed more slowly and shrank earlier. The egg hatching rate was significantly reduced by treatment with the inhibitor. These results showed that the two new compounds had a significant impact on the physiological indicators related to reproduction of S. frugiperda, and have pest control potential. This study investigated the effect of trehalase and chitin inhibitors on insect reproduction and should promote the development of green and efficient insecticides.
Collapse
Affiliation(s)
- Xinyi Jiang
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, Zhejiang 311121, P.R. China
| | - Fan Zhong
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, Zhejiang 311121, P.R. China
| | - Yan Chen
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, Zhejiang 311121, P.R. China
| | - Dongmei Shi
- Department of Applied Chemistry, Innovation Center of Pesticide Research, College of Science, China Agricultural University, Beijing 100193, P.R. China
| | - Lei Chao
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, Zhejiang 311121, P.R. China
| | - Liuhe Yu
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, Zhejiang 311121, P.R. China
| | - Biner He
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, Zhejiang 311121, P.R. China
| | - Caidi Xu
- Jing Hengyi School of Education, HangzhouNormal University, Hangzhou, Zhejiang 311121, P.R.China
| | - Yan Wu
- Key Laboratory of Surveillance and Management of Invasive Alien Species in Guizhou Education Department ,Guiyang University, Guiyang 550005, P.R.China
| | - Bin Tang
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, Zhejiang 311121, P.R. China
| | - Hongxia Duan
- Department of Applied Chemistry, Innovation Center of Pesticide Research, College of Science, China Agricultural University, Beijing 100193, P.R. China
| | - Shigui Wang
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, Zhejiang 311121, P.R. China
| |
Collapse
|
5
|
Yang X, Shu Y, Cao S, Sun H, Zhang X, Zhang A, Li Y, Ma D, Chen H, Li W. Trehalase Inhibitor Validamycin May Have Additional Mechanisms of Toxicology against Rhizoctonia cerealis. J Fungi (Basel) 2023; 9:846. [PMID: 37623617 PMCID: PMC10455246 DOI: 10.3390/jof9080846] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2023] [Revised: 08/09/2023] [Accepted: 08/11/2023] [Indexed: 08/26/2023] Open
Abstract
Sharp eyespot is a crucial disease affecting cereal plants, such as bread wheat (Triticum aestivum) and barley (Hordeum vulgare), and is primarily caused by the pathogenic fungus Rhizoctonia cerealis. As disease severity has increased, it has become imperative to find an effective and reasonable control strategy. One such strategy is the use of the trehalose analog, validamycin, which has been shown to have a potent inhibitory effect on several trehalases found in both insects and fungi, and is widely used as a fungicide in agriculture. In this study, we demonstrated that 0.5 μg/mL validamycin on PDA plates had an inhibitory effect on R. cerealis strain R0301, but had no significant impact on Fusarium graminearum strain PH-1. Except for its inhibiting the trehalase activity of pathogenic fungi, little is known about its mechanism of action. Six trehalase genes were identified in the genome of R. cerealis, including one neutral trehalase and five acidic trehalase genes. Enzyme activity assays indicated that treatment with 5 μg/mL validamycin significantly reduces trehalase activity, providing evidence that validamycin treatment does indeed affect trehalase, even though the expression levels of most trehalase genes, except Rc17406, were not obviously affected. Transcriptome analysis revealed that treatment with validamycin downregulated genes involved in metabolic processes, ribosome biogenesis, and pathogenicity in the R. cerealis. KEGG pathway analysis further showed that validamycin affected genes related to the MAPK signaling pathway, with a significant decrease in ribosome synthesis and assembly. In conclusion, our results indicated that validamycin not only inhibits trehalose activity, but also affects the ribosome synthesis and MAPK pathways of R. cerealis, leading to the suppression of fungal growth and pesticidal effects. This study provides novel insights into the mechanism of action of validamycin.
Collapse
Affiliation(s)
- Xiaoyue Yang
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
- Key Laboratory of Sustainable Crop Production in the Middle Reaches of the Yangtze River, College of Agriculture, Yangtze University, Jingzhou 434025, China
| | - Yan Shu
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
| | - Shulin Cao
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
| | - Haiyan Sun
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
| | - Xin Zhang
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
| | - Aixiang Zhang
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
| | - Yan Li
- Key Laboratory of Sustainable Crop Production in the Middle Reaches of the Yangtze River, College of Agriculture, Yangtze University, Jingzhou 434025, China
| | - Dongfang Ma
- Key Laboratory of Sustainable Crop Production in the Middle Reaches of the Yangtze River, College of Agriculture, Yangtze University, Jingzhou 434025, China
| | - Huaigu Chen
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
- Jiangsu Co-Innovation Centre for Modern Production Technology of Grain Crops, Yangzhou University, Yangzhou 225009, China
| | - Wei Li
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
- Jiangsu Co-Innovation Centre for Modern Production Technology of Grain Crops, Yangzhou University, Yangzhou 225009, China
| |
Collapse
|
6
|
Duay SS, Yap RCY, Gaitano AL, Santos JAA, Macalino SJY. Roles of Virtual Screening and Molecular Dynamics Simulations in Discovering and Understanding Antimalarial Drugs. Int J Mol Sci 2023; 24:ijms24119289. [PMID: 37298256 DOI: 10.3390/ijms24119289] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2023] [Revised: 05/16/2023] [Accepted: 05/23/2023] [Indexed: 06/12/2023] Open
Abstract
Malaria continues to be a global health threat, with approximately 247 million cases worldwide. Despite therapeutic interventions being available, patient compliance is a problem due to the length of treatment. Moreover, drug-resistant strains have emerged over the years, necessitating urgent identification of novel and more potent treatments. Given that traditional drug discovery often requires a great deal of time and resources, most drug discovery efforts now use computational methods. In silico techniques such as quantitative structure-activity relationship (QSAR), docking, and molecular dynamics (MD) can be used to study protein-ligand interactions and determine the potency and safety profile of a set of candidate compounds to help prioritize those tested using assays and animal models. This paper provides an overview of antimalarial drug discovery and the application of computational methods in identifying candidate inhibitors and elucidating their potential mechanisms of action. We conclude with the continued challenges and future perspectives in the field of antimalarial drug discovery.
Collapse
Affiliation(s)
- Searle S Duay
- Department of Chemistry, De La Salle University, Manila 0922, Philippines
| | - Rianne Casey Y Yap
- Department of Chemistry, De La Salle University, Manila 0922, Philippines
| | - Arturo L Gaitano
- Chemistry Department, Adamson University, Manila 1000, Philippines
| | | | | |
Collapse
|
7
|
Zhong F, Yu L, Jiang X, Chen Y, Wang S, Chao L, Jiang Z, He B, Xu C, Wang S, Tang B, Duan H, Wu Y. Potential inhibitory effects of compounds ZK-PI-5 and ZK-PI-9 on trehalose and chitin metabolism in Spodoptera frugiperda (J. E. Smith). Front Physiol 2023; 14:1178996. [PMID: 37064912 PMCID: PMC10090375 DOI: 10.3389/fphys.2023.1178996] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2023] [Accepted: 03/21/2023] [Indexed: 03/31/2023] Open
Abstract
Introduction:Spodoptera frugiperda is an omnivorous agricultural pest which is great dangerous for grain output.Methods: In order to investigate the effects of potential trehalase inhibitors, ZK-PI-5 and ZK-PI-9, on the growth and development of S. frugiperda, and to identify new avenues for S. frugiperda control, we measured the content of the trehalose, glucose, glycogen and chitin, enzyme activity, and gene expression levels in trehalose and chitin metabolism of S. frugiperda. Besides, their growth and development were also observed.Results: The results showed that ZK-PI-9 significantly reduced trehalase activity and ZK-PI-5 significantly reduced membraned-bound trehalase activity. Moreover, ZK-PI-5 inhibited the expression of SfTRE2, SfCHS2, and SfCHT, thus affecting the chitin metabolism. In addition, the mortality of S. frugiperda in pupal stage and eclosion stage increased significantly after treatment with ZK-PI-5 and ZK-PI-9, which affected their development stage and caused death phenotype (abnormal pupation and difficulty in breaking pupa).Discussion: These results have provided a theoretical basis for the application of trehalase inhibitors in the control of agricultural pests to promote future global grain yield.
Collapse
Affiliation(s)
- Fan Zhong
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | - Liuhe Yu
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | - Xinyi Jiang
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | - Yan Chen
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | - Sitong Wang
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | - Lei Chao
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | - Zhiyang Jiang
- Innovation Center of Pesticide Research, Department of Applied Chemistry, College of Science, China Agricultural University, Beijing, China
| | - Biner He
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | - Caidi Xu
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | - Shigui Wang
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
| | - Bin Tang
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China
- *Correspondence: Bin Tang, ; Hongxia Duan, ; Yan Wu,
| | - Hongxia Duan
- Innovation Center of Pesticide Research, Department of Applied Chemistry, College of Science, China Agricultural University, Beijing, China
- *Correspondence: Bin Tang, ; Hongxia Duan, ; Yan Wu,
| | - Yan Wu
- Guizhou Provincial Key Laboratory for Rare Animal and Economic Insect of the Mountainous Region, Department of Biology and Engineering of Environment, Guiyang University, Guiyang, China
- *Correspondence: Bin Tang, ; Hongxia Duan, ; Yan Wu,
| |
Collapse
|
8
|
Adedeji EO, Oduselu GO, Ogunlana OO, Fatumo S, Koenig R, Adebiyi E. Anopheles gambiae Trehalase Inhibitors for Malaria Vector Control: A Molecular Docking and Molecular Dynamics Study. INSECTS 2022; 13:1070. [PMID: 36421973 PMCID: PMC9694508 DOI: 10.3390/insects13111070] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Revised: 10/31/2022] [Accepted: 11/12/2022] [Indexed: 06/07/2023]
Abstract
Trehalase inhibitors are considered safe alternatives for insecticides and fungicides. However, there are no studies testing these compounds on Anopheles gambiae, a major vector of human malaria. This study predicted the three-dimensional structure of Anopheles gambiae trehalase (AgTre) and identified potential inhibitors using molecular docking and molecular dynamics methods. Robetta server, C-I-TASSER, and I-TASSER were used to predict the protein structure, while the structural assessment was carried out using SWISS-MODEL, ERRAT, and VERIFY3D. Molecular docking and screening of 3022 compounds was carried out using AutoDock Vina in PyRx, and MD simulation was carried out using NAMD. The Robetta model outperformed all other models and was used for docking and simulation studies. After a post-screening analysis and ADMET studies, uniflorine, 67837201, 10406567, and Compound 2 were considered the best hits with binding energies of -6.9, -8.9, -9, and -8.4 kcal/mol, respectively, better than validamycin A standard (-5.4 kcal/mol). These four compounds were predicted to have no eco-toxicity, Brenk, or PAINS alerts. Similarly, they were predicted to be non-mutagenic, carcinogenic, or hepatoxic. 67837201, 10406567, and Compound 2 showed excellent stability during simulation. The study highlights uniflorine, 67837201, 10406567, and Compound 2 as good inhibitors of AgTre and possible compounds for malaria vector control.
Collapse
Affiliation(s)
- Eunice O. Adedeji
- Covenant University Bioinformatics Research (CUBRe), Covenant University, Ota 112233, Nigeria
- Department of Biochemistry, College of Science and Technology, Covenant University, Ota 112233, Nigeria
| | - Gbolahan O. Oduselu
- Covenant University Bioinformatics Research (CUBRe), Covenant University, Ota 112233, Nigeria
- Department of Chemistry, College of Science and Technology, Covenant University, Ota 112233, Nigeria
| | - Olubanke O. Ogunlana
- Covenant University Bioinformatics Research (CUBRe), Covenant University, Ota 112233, Nigeria
- Department of Biochemistry, College of Science and Technology, Covenant University, Ota 112233, Nigeria
- Covenant Applied Informatics and Communication Africa Centre of Excellence (CApIC-ACE), Covenant University, Ota 112233, Nigeria
| | - Segun Fatumo
- Department of Non-Communicable Disease Epidemiology, London School of Hygiene & Tropical Medicine, London WC1H 9SH, UK
| | - Rainer Koenig
- Institute for Infectious Diseases and Infection Control (IIMK, RG Systemsbiology), Jena University Hospital, Am Klinikum 1, 07747 Jena, Germany
| | - Ezekiel Adebiyi
- Covenant University Bioinformatics Research (CUBRe), Covenant University, Ota 112233, Nigeria
- Covenant Applied Informatics and Communication Africa Centre of Excellence (CApIC-ACE), Covenant University, Ota 112233, Nigeria
- Department of Computer and Information Sciences, College of Science and Technology, Covenant University, Ota 112233, Nigeria
- Division of Applied Bioinformatics, German Cancer Research Center (DKFZ), G200, Im Neuenheimer Feld 280, 69120 Heidelberg, Germany
| |
Collapse
|
9
|
Demir E, Kansız S, Doğan M, Topel Ö, Akkoyunlu G, Kandur MY, Turna Demir F. Hazard Assessment of the Effects of Acute and Chronic Exposure to Permethrin, Copper Hydroxide, Acephate, and Validamycin Nanopesticides on the Physiology of Drosophila: Novel Insights into the Cellular Internalization and Biological Effects. Int J Mol Sci 2022; 23:ijms23169121. [PMID: 36012388 PMCID: PMC9408976 DOI: 10.3390/ijms23169121] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2022] [Revised: 08/07/2022] [Accepted: 08/09/2022] [Indexed: 12/23/2022] Open
Abstract
New insights into the interactions between nanopesticides and edible plants are required in order to elucidate their impacts on human health and agriculture. Nanopesticides include formulations consisting of organic/inorganic nanoparticles. Drosophila melanogaster has become a powerful model in genetic research thanks to its genetic similarity to mammals. This project mainly aimed to generate new evidence for the toxic/genotoxic properties of different nanopesticides (a nanoemulsion (permethrin nanopesticides, 20 ± 5 nm), an inorganic nanoparticle as an active ingredient (copper(II) hydroxide [Cu(OH)2] nanopesticides, 15 ± 6 nm), a polymer-based nanopesticide (acephate nanopesticides, 55 ± 25 nm), and an inorganic nanoparticle associated with an organic active ingredient (validamycin nanopesticides, 1177 ± 220 nm)) and their microparticulate forms (i.e., permethrin, copper(II) sulfate pentahydrate (CuSO4·5H2O), acephate, and validamycin) widely used against agricultural pests, while also showing the merits of using Drosophila—a non-target in vivo eukaryotic model organism—in nanogenotoxicology studies. Significant biological effects were noted at the highest doses of permethrin (0.06 and 0.1 mM), permethrin nanopesticides (1 and 2.5 mM), CuSO4·5H2O (1 and 5 mM), acephate and acephate nanopesticides (1 and 5 mM, respectively), and validamycin and validamycin nanopesticides (1 and 2.5 mM, respectively). The results demonstrating the toxic/genotoxic potential of these nanopesticides through their impact on cellular internalization and gene expression represent significant contributions to future nanogenotoxicology studies.
Collapse
Affiliation(s)
- Eşref Demir
- Medical Laboratory Techniques Program, Vocational School of Health Services, Department of Medical Services and Techniques, Antalya Bilim University, Antalya 07190, Turkey
- Correspondence: ; Tel.: +90-242-245-0088; Fax: +90-242-245-0100
| | - Seyithan Kansız
- Faculty of Science, Department of Chemistry, Akdeniz University, Antalya 07070, Turkey
- Faculty of Science, Department of Chemistry, Ankara University, Ankara 07100, Turkey
| | - Mehmet Doğan
- Faculty of Medicine, Department of Histology and Embryology, Akdeniz University, Antalya 07070, Turkey
- Department of Histology and Embryology, Faculty of Medicine, Kırklareli University, Kırklareli 39100, Turkey
| | - Önder Topel
- Faculty of Science, Department of Chemistry, Akdeniz University, Antalya 07070, Turkey
| | - Gökhan Akkoyunlu
- Faculty of Medicine, Department of Histology and Embryology, Akdeniz University, Antalya 07070, Turkey
| | - Muhammed Yusuf Kandur
- Industrial Biotechnology and Systems Biology Research Group, Faculty of Engineering, Department of Bioengineering, Marmara University, İstanbul 34854, Turkey
| | - Fatma Turna Demir
- Medical Laboratory Techniques Program, Vocational School of Health Services, Department of Medical Services and Techniques, Antalya Bilim University, Antalya 07190, Turkey
| |
Collapse
|
10
|
Chio EH, Li QX. Pesticide Research and Development: General Discussion and Spinosad Case. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2022; 70:8913-8919. [PMID: 35834192 DOI: 10.1021/acs.jafc.2c03821] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
On average, it has taken approximately 10 years and $250 million to discover and develop one pesticide out of approximately 100 000 compounds. A successful pesticide researcher nowadays needs to be knowledgeable and skillful in multiple disciplines. As a result of the high costs and unique requirements, only a handful of companies in the world can afford to continue pesticide research and development (R/D) in the $70 billion pesticide market. Pesticide R/D is a high-risk yet high-reward business. In this perspective, pesticide R/D is briefly discussed and a case study is used to illustrate how spinosad was discovered and became a successful product, despite the many challenges facing pesticide R/D.
Collapse
Affiliation(s)
- Eddie H Chio
- Department of Entomology, National Taiwan University, Taipei City 106, Taiwan, China
| | - Qing X Li
- Department of Molecular Biosciences and Bioengineering, University of Hawaii at Manoa, Honolulu, Hawaii 96822, United States
| |
Collapse
|
11
|
Cardona F, Parmeggiani C, Matassini C. Women in Bioorganic Chemistry. Molecules 2022; 27:molecules27134290. [PMID: 35807535 PMCID: PMC9268729 DOI: 10.3390/molecules27134290] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2022] [Accepted: 06/30/2022] [Indexed: 02/04/2023] Open
Abstract
We are very happy to present this Special Issue, for which we acted as guest editors, and which includes scientific contributions from laboratories headed by women active in the field of bioorganic chemistry [...]
Collapse
Affiliation(s)
- Francesca Cardona
- Dipartimento di Chimica “Ugo Schiff” (DICUS), Università di Firenze, via della Lastruccia 3-13, 50019 Sesto Fiorentino, Italy; (C.P.); (C.M.)
- Correspondence:
| | - Camilla Parmeggiani
- Dipartimento di Chimica “Ugo Schiff” (DICUS), Università di Firenze, via della Lastruccia 3-13, 50019 Sesto Fiorentino, Italy; (C.P.); (C.M.)
- European Laboratory for Non Linear Spectroscopy (LENS), via Nello Carrara 1, 50019 Sesto Fiorentino, Italy
| | - Camilla Matassini
- Dipartimento di Chimica “Ugo Schiff” (DICUS), Università di Firenze, via della Lastruccia 3-13, 50019 Sesto Fiorentino, Italy; (C.P.); (C.M.)
| |
Collapse
|
12
|
Li YX, Wang JZ, Shimadate Y, Kise M, Kato A, Jia YM, Fleet GWJ, Yu CY. Diastereoselective Synthesis, Glycosidase Inhibition, and Docking Study of C-7-Fluorinated Casuarine and Australine Derivatives. J Org Chem 2022; 87:7291-7307. [PMID: 35584209 DOI: 10.1021/acs.joc.2c00485] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
C-7-fluorinated derivatives of two important polyhydroxylated pyrrolizidines, casuarine and australine, were synthesized with organocatalytic stereoselective α-fluorination of aldehydes as the key step. The strategy is extensively applicable to some synthetically challenging fluorinated iminosugars and carbohydrates. The docking studies indicated that the potent inhibitions of trehalase and amyloglucosidase by the fluorinated polyhydroxylated pyrrolizidines are due to the interaction modes dominated by fluorine atoms in these iminosugars with the amino acids' residues of the corresponding enzymes. Steady interactions were established between the C-7 fluoride and a hydrophobic pocket in amyloglucosidase by untypical anion-π interactions. These unexpected docking modes and related structure-activity relationship studies emphasize the value of fluorination in the design of polyhydroxylated pyrrolizidine glycosidase inhibitors.
Collapse
Affiliation(s)
- Yi-Xian Li
- Beijing National Laboratory for Molecular Science (BNLMS), CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.,University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jun-Zhe Wang
- Beijing National Laboratory for Molecular Science (BNLMS), CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.,University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yuna Shimadate
- Department of Hospital Pharmacy, University of Toyama, 2630 Sugitani, Toyama 930-0194, Japan.,Faculty of Pharmaceutical Sciences, University of Toyama, Toyama 930-0194, Japan
| | - Maki Kise
- Department of Hospital Pharmacy, University of Toyama, 2630 Sugitani, Toyama 930-0194, Japan.,Faculty of Pharmaceutical Sciences, University of Toyama, Toyama 930-0194, Japan
| | - Atsushi Kato
- Department of Hospital Pharmacy, University of Toyama, 2630 Sugitani, Toyama 930-0194, Japan.,Faculty of Pharmaceutical Sciences, University of Toyama, Toyama 930-0194, Japan
| | - Yue-Mei Jia
- Beijing National Laboratory for Molecular Science (BNLMS), CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.,University of Chinese Academy of Sciences, Beijing 100049, China
| | - George W J Fleet
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Mansfield Road, Oxford OX1 3TA, U. K
| | - Chu-Yi Yu
- Beijing National Laboratory for Molecular Science (BNLMS), CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.,University of Chinese Academy of Sciences, Beijing 100049, China
| |
Collapse
|
13
|
Chang Y, Zhang B, Du M, Geng Z, Wei J, Guan R, An S, Zhao W. The vital hormone 20-hydroxyecdysone controls ATP production by upregulating binding of trehalase 1 with ATP synthase subunit α in Helicoverpa armigera. J Biol Chem 2022; 298:101565. [PMID: 34999119 PMCID: PMC8819028 DOI: 10.1016/j.jbc.2022.101565] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2021] [Revised: 12/18/2021] [Accepted: 12/21/2021] [Indexed: 12/02/2022] Open
Abstract
Trehalose is the major “blood sugar” of insects and it plays a crucial role in energy supply and as a stress protectant. The hydrolysis of trehalose occurs only under the enzymatic control of trehalase (Treh), which plays important roles in growth and development, energy supply, chitin biosynthesis, and abiotic stress responses. Previous reports have revealed that the vital hormone 20-hydroxyecdysone (20E) regulates Treh, but the detailed mechanism underlying 20E regulating Treh remains unclear. In this study, we investigated the function of HaTreh1 in Helicoverpa armigera larvae. The results showed that the transcript levels and enzymatic activity of HaTreh1 were elevated during molting and metamorphosis stages in the epidermis, midgut, and fat body, and that 20E upregulated the transcript levels of HaTreh1 through the classical nuclear receptor complex EcR-B1/USP1. HaTreh1 is a mitochondria protein. We also found that knockdown of HaTreh1 in the fifth- or sixth-instar larvae resulted in weight loss and increased mortality. Yeast two-hybrid, coimmunoprecipitation, and glutathione-S-transferase (GST) pull-down experiments demonstrated that HaTreh1 bound with ATP synthase subunit alpha (HaATPs-α) and that this binding increased under 20E treatment. In addition, 20E enhanced the transcript level of HaATPs-α and ATP content. Finally, the knockdown of HaTreh1 or HaATPs-α decreased the induction effect of 20E on ATP content. Altogether, these findings demonstrate that 20E controls ATP production by up-regulating the binding of HaTreh1 to HaATPs-α in H. armigera.
Collapse
Affiliation(s)
- Yanpeng Chang
- State key Laboratory of Wheat and Maize Crop Science/College of Plant Protection, Henan Agricultural University, Zhengzhou, China
| | - Bo Zhang
- State key Laboratory of Wheat and Maize Crop Science/College of Plant Protection, Henan Agricultural University, Zhengzhou, China
| | - Mengfang Du
- State key Laboratory of Wheat and Maize Crop Science/College of Plant Protection, Henan Agricultural University, Zhengzhou, China
| | - Zichen Geng
- State key Laboratory of Wheat and Maize Crop Science/College of Plant Protection, Henan Agricultural University, Zhengzhou, China
| | - Jizhen Wei
- State key Laboratory of Wheat and Maize Crop Science/College of Plant Protection, Henan Agricultural University, Zhengzhou, China
| | - Ruobing Guan
- State key Laboratory of Wheat and Maize Crop Science/College of Plant Protection, Henan Agricultural University, Zhengzhou, China
| | - Shiheng An
- State key Laboratory of Wheat and Maize Crop Science/College of Plant Protection, Henan Agricultural University, Zhengzhou, China
| | - Wenli Zhao
- State key Laboratory of Wheat and Maize Crop Science/College of Plant Protection, Henan Agricultural University, Zhengzhou, China.
| |
Collapse
|
14
|
Holzwarth M, Ludwig J, Bernz A, Claasen B, Majoul A, Reuter J, Zens A, Pawletta B, Bilitewski U, Weiss IM, Laschat S. Modulating chitin synthesis in marine algae with iminosugars obtained by SmI 2 and FeCl 3-mediated diastereoselective carbonyl ene reaction. Org Biomol Chem 2022; 20:6606-6618. [DOI: 10.1039/d2ob00907b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Strategies for synthesizing polyhydroxylated piperidines such as iminosugars have received broad attention. These substances are known to interact with carbohydrate related enzymes glycosidases and glycosyltransferases, to which also the large...
Collapse
|
15
|
García MD, Argüelles JC. Trehalase inhibition by validamycin A may be a promising target to design new fungicides and insecticides. PEST MANAGEMENT SCIENCE 2021; 77:3832-3835. [PMID: 33786994 DOI: 10.1002/ps.6382] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2020] [Revised: 03/25/2021] [Accepted: 03/30/2021] [Indexed: 06/12/2023]
Abstract
The introduction of insecticides and fungicides in agriculture has improved crop yields and, consequently, the quality of life for many people, especially in what is widely considered as the 'first world'. However, the indiscriminate use of dangerous chemical insecticides has led to pest resistance, human and animal poisoning and environmental pollution. Biochemical and genetic evidence concludes that the non-reducing disaccharide trehalose plays an essential role in the pathobiology of many insects and fungi. Both organisms share identical pathway for trehalose biosynthesis (the TPS/TPP pathway), while a high degree of homology in their trehalose hydrolysis capacity (trehalase activities) has also been demonstrated. In the search for new, effective and environmentally sustainable compounds, a set of trehalase inhibitors has emerged as a potentially interesting antifungal and insecticidal target. In particular, the trehalose analogue, Validamycin A, which has a strong inhibitory effect on several trehalases, has been successfully introduced for the treatment of various diseases caused by insects and fungi. Herein, we review the main features of the specific interaction between Validamycin A and trehalase as well as the expected advantages of the applications based on trehalase inhibition as insecticides and fungicides. © 2021 Society of Chemical Industry.
Collapse
|
16
|
Masi M, Petraretti M, De Natale A, Pollio A, Evidente A. Fungal Metabolites with Antagonistic Activity against Fungi of Lithic Substrata. Biomolecules 2021; 11:biom11020295. [PMID: 33669378 PMCID: PMC7920264 DOI: 10.3390/biom11020295] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2021] [Revised: 02/10/2021] [Accepted: 02/12/2021] [Indexed: 01/13/2023] Open
Abstract
Fungi are among the biotic agents that can cause deterioration of building stones and cultural heritage. The most common methods used to control fungal spread and growth are based on chemical pesticides. However, the massive use of these synthetic chemicals produces heavy environmental pollution and risk to human and animal health. Furthermore, their use is time dependent and relies on the repetition of treatments, which increases the possibility of altering building stones and culture heritage through environmental contamination. One alternative is the use of natural products with high antifungal activity, which can result in reduced toxicity and deterioration of archeological remains. Recently, three fungal strains, namely Aspergillus niger, Alternaria alternata and Fusarium oxysporum, were isolated as damaging agents from the external tuff wall of the Roman remains "Villa of Poppea" in Oplontis, Naples, Italy. In this manuscript, three selected fungal metabolites, namely cyclopaldic acid, cavoxin and epi-epoformin, produced by fungi pathogenic for forest plants, were evaluated as potential antifungal compounds against the above fungi. Cavoxin and epi-epoformin showed antifungal activity against Asperigillus niger and Fusarium oxysporum, while cyclopaldic acid showed no activity when tested on the three fungi. The same antifungal activity was observed in vitro experiments on infected stones of the Neapolitan yellow tuff (NYT), a volcanic lithotype widely diffused in the archeological sites of Campania, Italy. This study represents a first step in the use of these two fungal metabolites to allow better preservation of artworks and to guarantee the conditions suitable for their conservation.
Collapse
Affiliation(s)
- Marco Masi
- Dipartimento di Scienze Chimiche, Università di Napoli Federico II, Complesso Universitario Monte S. Angelo, Via Cintia 4, 80126 Napoli, Italy;
- Correspondence: ; Tel.: +39-081-674239
| | - Mariagioia Petraretti
- Dipartimento di Biologia, Università di Napoli Federico II, Complesso Universitario Monte S. Angelo, Via Cintia 4, 80126 Napoli, Italy; (M.P.); (A.D.N.); (A.P.)
| | - Antonino De Natale
- Dipartimento di Biologia, Università di Napoli Federico II, Complesso Universitario Monte S. Angelo, Via Cintia 4, 80126 Napoli, Italy; (M.P.); (A.D.N.); (A.P.)
| | - Antonino Pollio
- Dipartimento di Biologia, Università di Napoli Federico II, Complesso Universitario Monte S. Angelo, Via Cintia 4, 80126 Napoli, Italy; (M.P.); (A.D.N.); (A.P.)
| | - Antonio Evidente
- Dipartimento di Scienze Chimiche, Università di Napoli Federico II, Complesso Universitario Monte S. Angelo, Via Cintia 4, 80126 Napoli, Italy;
| |
Collapse
|
17
|
Mirabella S, Petrucci G, Faggi C, Matassini C, Cardona F, Goti A. Allyl Cyanate/Isocyanate Rearrangement in Glycals: Stereoselective Synthesis of 1-Amino and Diamino Sugar Derivatives. Org Lett 2020; 22:9041-9046. [PMID: 33147974 PMCID: PMC7735751 DOI: 10.1021/acs.orglett.0c03438] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The [3,3]-sigmatropic allyl cyanate/isocyanate rearrangement of glycals in the presence of O-, N-, and C-nucleophiles afforded β-N-glucosyl and galactosyl carbamates, ureas, and amides in good yields. The unsaturated products were elaborated to N-glycosides by dihydroxylation, to 1,3-diaminosugars by tethered aminohydroxylation, or to 1,2-diaminosugars by iteration of the sigmatropic rearrangement. This metal-free methodology represents an excellent and general method for the stereoselective synthesis of N-glycosides and diamino sugars with complete transmission of stereochemical information.
Collapse
Affiliation(s)
- Stefania Mirabella
- Dipartimento di Chimica "Ugo Schiff", Università di Firenze, via della Lastruccia 3-13, 50019 Sesto Fiorentino, FI, Italy
| | - Giulia Petrucci
- Dipartimento di Chimica "Ugo Schiff", Università di Firenze, via della Lastruccia 3-13, 50019 Sesto Fiorentino, FI, Italy
| | - Cristina Faggi
- Dipartimento di Chimica "Ugo Schiff", Università di Firenze, via della Lastruccia 3-13, 50019 Sesto Fiorentino, FI, Italy
| | - Camilla Matassini
- Dipartimento di Chimica "Ugo Schiff", Università di Firenze, via della Lastruccia 3-13, 50019 Sesto Fiorentino, FI, Italy
| | - Francesca Cardona
- Dipartimento di Chimica "Ugo Schiff", Università di Firenze, via della Lastruccia 3-13, 50019 Sesto Fiorentino, FI, Italy
| | - Andrea Goti
- Dipartimento di Chimica "Ugo Schiff", Università di Firenze, via della Lastruccia 3-13, 50019 Sesto Fiorentino, FI, Italy
| |
Collapse
|
18
|
Nemadodzi LE, Vervoort J, Prinsloo G. NMR-Based Metabolomic Analysis and Microbial Composition of Soil Supporting Burkea africana Growth. Metabolites 2020; 10:E402. [PMID: 33050369 PMCID: PMC7600111 DOI: 10.3390/metabo10100402] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2020] [Revised: 09/14/2020] [Accepted: 09/21/2020] [Indexed: 11/17/2022] Open
Abstract
Burkea africana is a leguminous tree used for medicinal purposes, growing in clusters, on soils impoverished from most nutrients. The study aimed to determine the factors responsible for successful reproduction and establishment of the B. africana trees in nature, as all efforts for commercial production has been proven unsuccessful. An investigation was carried out to determine the metabolomic profile, chemical composition, and microbial composition of the soils where B. africana grows (Burkea soil) versus the soil where it does not grow (non-Burkea soil). 1H-NMR metabolomic analysis showed different metabolites in the respective soils. Trehalose and betaine, as well as a choline-like and carnitine-like compound, were found to be in higher concentration in Burkea soils, whereas, acetate, lactate, and formate were concentrated in non-Burkea soils. Liquid Chromatography-Mass Spectrometry analysis revealed the presence of numerous amino acids such as aspartic acid and glutamine to be higher in Burkea soils. Since it was previously suggested that the soil microbial diversity is the major driver for establishment and survival of seedlings in nature, Deoxyribonucleic acid (DNA) was extracted and a BLAST analysis conducted for species identification. Penicillium species was found to be highly prevalent and discriminant between the two soils, associated with the Burkea soils. No differences in the bacterial composition of Burkea and non-Burkea soils were observed. The variances in fungal composition suggests that species supremacy play a role in development of B. africana trees and is responsible for creating a supporting environment for natural establishment and survival of seedlings.
Collapse
Affiliation(s)
- Lufuno Ethel Nemadodzi
- Department of Agriculture and Animal Health, University of South Africa, Science Campus, Florida, Johannesburg 1710, South Africa;
- ABBERU, University of South Africa, Science Campus, Florida, Johannesburg 1710, South Africa
| | - Jacques Vervoort
- Laboratory of Biochemistry, Wageningen University, 6708 PB Wageningen, The Netherlands;
| | - Gerhard Prinsloo
- Department of Agriculture and Animal Health, University of South Africa, Science Campus, Florida, Johannesburg 1710, South Africa;
| |
Collapse
|