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Colaço M, Ewert J, von Glasenapp JS, Pischel U, Herges R, Basílio N. Diazocines as Guests of Cucurbituril Macrocycles: Light-Responsive Binding and Supramolecular Catalysis of Thermal Isomerization. J Am Chem Soc 2025; 147:734-745. [PMID: 39720919 DOI: 10.1021/jacs.4c13353] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2024]
Abstract
The photoswitching of supramolecular host-guest complexes is the basis of numerous molecularly controlled macroscopic functions, such as sol-gel transition, photopharmacology, the active transport of ions or molecules, light-powered molecular machines, and much more. The most commonly used systems employ photoactive azobenzene guests and synthetic host molecules, which bind as the stable E isomers and dissociate as the Z forms after exposure to UV light. We present a new, extraordinarily efficient cucurbit[7]uril (CB7)/diazocine host/guest complex with inverted stability that self-assembles under UV irradiation and dissociates in the dark. The association constants of the Z and E isomers in water differ by more than 104-fold. We also show that the thermally activated E → Z isomerization is significantly accelerated by CB7, which is a rare case of enzyme-like catalysis by transition state stabilization without product inhibition. In contrast to CB7, cucurbit[8]uril (CB8) binds both isomers with high affinity, showing good selectivity (∼1000-fold) toward the Z isomer. Notably, this isomer preferentially binds CB8 relative to CB7 by a factor greater than 1 × 106. We also use the system to introduce a supramolecular photoacid that builds on the increased basicity of a guest bound to CB7 and on the extremely high affinity of the E isomer, which is utilized to displace the acid from CB7, thereby switching the pH of the solution.
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Affiliation(s)
- Miriam Colaço
- Laboratório Associado para a Química Verde (LAQV), Rede de Química e Tecnologia (REQUIMTE), Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade NOVA de Lisboa, 2829-516 Caparica, Portugal
| | - Julia Ewert
- Otto Diels-Institute of Organic Chemistry, Christian-Albrechts-University Kiel, Otto Hahn Platz 4, 24118 Kiel, Germany
| | - Jan-Simon von Glasenapp
- Otto Diels-Institute of Organic Chemistry, Christian-Albrechts-University Kiel, Otto Hahn Platz 4, 24118 Kiel, Germany
| | - Uwe Pischel
- CIQSO─Center for Research in Sustainable Chemistry and Department of Chemistry, University of Huelva, Campus de El Carmen s/n, E-21071 Huelva, Spain
| | - Rainer Herges
- Otto Diels-Institute of Organic Chemistry, Christian-Albrechts-University Kiel, Otto Hahn Platz 4, 24118 Kiel, Germany
| | - Nuno Basílio
- Laboratório Associado para a Química Verde (LAQV), Rede de Química e Tecnologia (REQUIMTE), Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade NOVA de Lisboa, 2829-516 Caparica, Portugal
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2
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Businski A, Ta TC, Gindullis N, Näther C, Herges R. Synthesis and crystal structure of tetra-methyl ( E)-4,4'-(ethene-1,2-di-yl)bis-(5-nitro-benzene-1,2-di-carboxyl-ate). Acta Crystallogr E Crystallogr Commun 2024; 80:435-438. [PMID: 38584740 PMCID: PMC10993603 DOI: 10.1107/s2056989024002676] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Accepted: 03/22/2024] [Indexed: 04/09/2024]
Abstract
The title compound, C22H18N2O12, was obtained as a by-product during the planned synthesis of 1,2-bis-(2-nitro-4,5-dimethyl phthalate)ethane by oxidative dimerization starting from dimethyl-4-methyl-5-nitro phthalate. To identify this compound unambiguously, a single-crystal structure analysis was performed. The asymmetric unit consists of half a mol-ecule that is located at a centre of inversion. As a result of symmetry restrictions, the mol-ecule shows an E configuration around the double bond. Both phenyl rings are coplanar, whereas the nitro and the two methyl ester groups are rotated out of the ring plane by 32.6 (1), 56.5 (2) and 49.5 (2)°, respectively. In the crystal, mol-ecules are connected into chains extending parallel to the a axis by pairs of C-H⋯O hydrogen bonds that are connected into a tri-periodic network by additional C-H⋯O hydrogen-bonding inter-actions.
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Affiliation(s)
- Artjom Businski
- Otto-Diels-Institut für Organische Chemie, Universität Kiel, Otto-Hahn-Platz 4, D-24098 Kiel, Germany
| | - Thuy C. Ta
- Otto-Diels-Institut für Organische Chemie, Universität Kiel, Otto-Hahn-Platz 4, D-24098 Kiel, Germany
| | - Niklas Gindullis
- Institut für Organische Chemie, Leibniz Universität Hannover, Schneiderberg 1 B, D-30167 Hannover, Germany
| | - Christian Näther
- Institut für Anorganische Chemie, Universität Kiel, Max-Eyth-Str. 2, D-24118 Kiel, Germany
| | - Rainer Herges
- Otto-Diels-Institut für Organische Chemie, Universität Kiel, Otto-Hahn-Platz 4, D-24098 Kiel, Germany
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3
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Ube T, Suka I, Ogikubo S, Hashimoto G, Suda M, Yamamoto HM, Ikeda T. Inducing Motions of Polymers in Liquid Nitrogen with Light. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2023; 35:e2306402. [PMID: 37867200 DOI: 10.1002/adma.202306402] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/02/2023] [Revised: 09/02/2023] [Indexed: 10/24/2023]
Abstract
Polymer materials that show macroscopic deformation in response to external stimuli are feasible for novel soft actuators including microactuators. Incorporation of photochromic moieties, such as azobenzenes, into polymer networks enables macroscopic deformation under irradiation with light through photoisomerization. Under cryogenic conditions, however, it has been difficult to induce macroscopic deformation as polymers lose their soft nature due to the severe restrictions of molecular motions. Here, activation of molecular motions and macroscopic deformation in liquid nitrogen only with light for polymers containing photochromic moieties is reported. Photoinduced bending of polymer networks with normal azobenzenes in liquid nitrogen is enabled by preliminary UV irradiation at room temperature to produce cis-isomers. To realize photoinduced deformation directly in liquid nitrogen, polymer networks are functionalized with bridged azobenzenes, which exist as cis-isomers in thermodynamic equilibrium. The films with bridged azobenzenes exhibit reversible photoisomerization and bending upon irradiation with light in liquid nitrogen without the need of preliminary irradiation, implying that the change in conformation of polymer chains can be isothermally induced even under cryogenic conditions. Achievement of flexible motions under cryogenic conditions through isothermal processes will greatly expand the operating temperature range of soft actuators.
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Affiliation(s)
- Toru Ube
- Research & Development Initiative, Chuo University, Tokyo, 112-8551, Japan
| | - Ikumi Suka
- Graduate School of Science and Engineering, Chuo University, Tokyo, 112-8551, Japan
| | - Shunya Ogikubo
- Graduate School of Science and Engineering, Chuo University, Tokyo, 112-8551, Japan
| | - Gaku Hashimoto
- Graduate School of Science and Engineering, Chuo University, Tokyo, 112-8551, Japan
| | - Masayuki Suda
- Graduate School of Engineering, Kyoto University, Kyoto, 615-8510, Japan
| | | | - Tomiki Ikeda
- Research & Development Initiative, Chuo University, Tokyo, 112-8551, Japan
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4
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Baby A, John AM, Balakrishnan SP. Photoresponsive Carbon-Azobenzene Hybrids: A Promising Material for Energy Devices. Chemphyschem 2023; 24:e202200676. [PMID: 36445807 DOI: 10.1002/cphc.202200676] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2022] [Revised: 11/24/2022] [Accepted: 11/24/2022] [Indexed: 11/30/2022]
Abstract
Advancements in renewable energy technology have been a hot topic in the field of photoresponsive materials for a sustainable community. Organic compounds that function as photoswitches is being researched and developed for use in a variety of energy storage systems. Azobenzene photoswitches can be used to store and release solar energy in solar thermal fuels. This review draws out the significance of azobenzene as photoswitches and its recent advances in solar thermal fuels. The recent developments of nano carbon templated azobenzene, their interactions and the effect of substituents are highlighted. The review also introduces their applications in solar thermal fuels and concludes with the challenges and future scope of the material. The advancements of solar thermal fuels with cost effective and desired optimal properties can be explored by scientists and engineers from different technological backgrounds.
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Affiliation(s)
- Anjana Baby
- Department of Chemistry, CHRIST (Deemed to be University), Hosur Road, Bengaluru, Karnataka, India, 560029
| | - Athira Maria John
- Department of Chemistry, CHRIST (Deemed to be University), Hosur Road, Bengaluru, Karnataka, India, 560029
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5
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Ewert J, Heintze L, Jordà-Redondo M, von Glasenapp JS, Nonell S, Bucher G, Peifer C, Herges R. Photoswitchable Diazocine-Based Estrogen Receptor Agonists: Stabilization of the Active Form inside the Receptor. J Am Chem Soc 2022; 144:15059-15071. [PMID: 35952371 DOI: 10.1021/jacs.2c03649] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Photopharmacology is an emerging approach in drug design and pharmacological therapy. Light is used to switch a pharmacophore between a biologically inactive and an active isomer with high spatiotemporal resolution at the site of illness, thus potentially avoiding side effects in neighboring healthy tissue. The most frequently used strategy to design a photoswitchable drug is to replace a suitable functional group in a known bioactive molecule with azobenzene. Our strategy is different in that the photoswitch moiety is closer to the drug's scaffold. Docking studies reveal a very high structural similarity of natural 17β-estradiol and the E isomers of dihydroxy diazocines, but not their Z isomers, respectively. Seven dihydroxy diazocines were synthesized and subjected to a biological estrogen reporter gene assay. Four derivatives exhibit distinct estrogenic activity after irradiation with violet light, which can be shut off with green light. Most remarkably, the photogenerated, active E form of one of the active compounds isomerizes back to the inactive Z form with a half-life of merely several milliseconds in water, but nevertheless is active for more than 3 h in the presence of the estrogen receptor. The results suggest a significant local impact of the ligand-receptor complex toward back-isomerization. Thus, drugs that are active when bound but lose their activity immediately after leaving the receptor could be of great pharmacological value because they strongly increase target specificity. Moreover, the drugs are released into the environment in their inactive form. The latter argument is particularly important for drugs that act as endocrine disruptors.
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Affiliation(s)
- Julia Ewert
- Otto-Diels-Institute of Organic Chemistry, Christian-Albrechts-University of Kiel, 24098 Kiel, Germany
| | - Linda Heintze
- Institute of Pharmacy, Christian-Albrechts-University of Kiel, 24118 Kiel, Germany
| | | | - Jan-Simon von Glasenapp
- Otto-Diels-Institute of Organic Chemistry, Christian-Albrechts-University of Kiel, 24098 Kiel, Germany
| | - Santi Nonell
- Institut Químic de Sarrià, Universitat Ramon Llull, 08017 Barcelona, Spain
| | - Götz Bucher
- School of Chemistry, University of Glasgow, Glasgow G12 8QQ, U. K
| | - Christian Peifer
- Institute of Pharmacy, Christian-Albrechts-University of Kiel, 24118 Kiel, Germany
| | - Rainer Herges
- Otto-Diels-Institute of Organic Chemistry, Christian-Albrechts-University of Kiel, 24098 Kiel, Germany
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6
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Berry J, Lindhorst TK, Despras G. Sulfur and Azobenzenes, a Profitable Liaison: Straightforward Synthesis of Photoswitchable Thioglycosides with Tunable Properties. Chemistry 2022; 28:e202200354. [PMID: 35537915 PMCID: PMC9401004 DOI: 10.1002/chem.202200354] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2022] [Indexed: 01/07/2023]
Abstract
Azobenzene photoswitches are valuable tools for controlling properties of molecular systems with light. We have been investigating azobenzene glycoconjugates to probe carbohydrate-protein interactions and to design glycoazobenzene macrocycles with chiroptical and physicochemical properties modulated by light irradiation. To date, direct conjugation of glycosides to azobenzenes was performed by reactions providing target compounds in limited yields. We therefore sought a more effective and reliable coupling method. In this paper, we report on a straightforward thioarylation of azobenzene derivatives with glycosyl thiols as well as other thiols, thereby increasing the scope of azobenzene conjugation. Even challenging unsymmetrical conjugates can be achieved in good yields via sequential or one-pot procedures. Importantly, red-shifted azoswitches, which are addressed with visible light, were easily functionalized. Additionally, by oxidation of the sulfide bridge to the respective sulfones, both the photochromic and the thermal relaxation properties of the core azobenzene can be tuned. Utilizing this option, we realized orthogonal three-state photoswitching in mixtures containing two distinct azobenzene thioglycosides.
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Affiliation(s)
- Jonathan Berry
- Otto Diels Institute of Organic ChemistryChristiana Albertina University of KielOtto-Hahn-Platz 3/424118KielGermany
| | - Thisbe K. Lindhorst
- Otto Diels Institute of Organic ChemistryChristiana Albertina University of KielOtto-Hahn-Platz 3/424118KielGermany
| | - Guillaume Despras
- Otto Diels Institute of Organic ChemistryChristiana Albertina University of KielOtto-Hahn-Platz 3/424118KielGermany
- Laboratoire des IMRCPUniversité de ToulouseCNRS UMR 5623Université Paul Sabatier118 route de Narbonne31062Toulouse Cedex 9France
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7
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Fang W, Feng Y, Gao J, Wang H, Ge J, Yang Q, Feng W. Visible Light-Driven Alkyne-Grafted Ethylene-Bridged Azobenzene Chromophores for Photothermal Utilization. Molecules 2022; 27:molecules27103296. [PMID: 35630773 PMCID: PMC9145641 DOI: 10.3390/molecules27103296] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2022] [Revised: 05/17/2022] [Accepted: 05/17/2022] [Indexed: 02/05/2023] Open
Abstract
Molecular photoswitches are considered to be important candidates in the field of solar energy storage due to their sensitive and reversible bidirectional optical response. Nevertheless, it is still a daunting challenge to design a molecular photoswitch to improve the low solar spectrum utilization and quantum yields while achieving charging and discharging of heat without solvent assistance. Herein, a series of visible-light-driven ethylene-bridged azobenzene (b-Azo) chromophores with different alkyne substituents which can undergo isomerization reactions promoted in both directions by visible light are reported. Their visible light responsiveness improves their solar spectrum utilization while also having high quantum yields. In addition, as the compounds are liquids, there is no need to dissolve the compounds in order to exploit this switching. The photoisomerization of b-Azo can be adjusted by alkyne-related substituents, and hexyne-substituted b-Azo is able to store and release photothermal energy with a high density of 106.1 J·g−1, and can achieve a temperature increase of 1.8 °C at a low temperature of −1 °C.
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8
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Lee H, Tessarolo J, Langbehn D, Baksi A, Herges R, Clever GH. Light-Powered Dissipative Assembly of Diazocine Coordination Cages. J Am Chem Soc 2022; 144:3099-3105. [PMID: 35081312 PMCID: PMC8874908 DOI: 10.1021/jacs.1c12011] [Citation(s) in RCA: 77] [Impact Index Per Article: 25.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
![]()
Stimuli-responsive
coordination cages allow reversible control
over guest binding and release, relevant for adaptive receptors, carriers,
catalysts, and complex systems. Light serves as an advantageous stimulus,
as it can be applied with precise spatial and temporal resolution
without producing chemical waste products. We report the first Pd-mediated
coordination cage based on ligands embedding a diazocine photoswitch.
While the thermodynamically more stable cis-photoisomer
sloppily assembles to a mixture of species with general formula [Pdncis-L2n], the less stable trans-isomer yields a defined [Pd2trans-L4] cage that reversibly converts
back to the cis-system by irradiation at 530 nm or
thermal relaxation. The [Pdncis-L2n]
species do not bind a given guest; however, [Pd2trans-L4] is able to
encapsulate a bis-sulfonate as long as it is kept assembled, requiring
continuous irradiation at 385 nm. In the absence of UV light, thermal
relaxation results in back-switching and guest release. Assembly and
properties of the system were characterized by a combination of NMR,
ion mobility ESI-MS, single-crystal X-ray diffraction, and UV–vis
absorption studies.
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Affiliation(s)
- Haeri Lee
- Department of Chemistry and Chemical Biology, TU Dortmund University, Otto Hahn Straße 6, 44227 Dortmund, Germany.,Department of Chemistry, Hannam University, 1646, Yuseong-daero, Yuseong-gu, Daejeon, 34054, Republic of Korea
| | - Jacopo Tessarolo
- Department of Chemistry and Chemical Biology, TU Dortmund University, Otto Hahn Straße 6, 44227 Dortmund, Germany
| | - Daniel Langbehn
- Otto Diels Institute of Organic Chemistry, Christian-Albrechts University, Otto Hahn Platz 4, 24118 Kiel, Germany
| | - Ananya Baksi
- Department of Chemistry and Chemical Biology, TU Dortmund University, Otto Hahn Straße 6, 44227 Dortmund, Germany
| | - Rainer Herges
- Otto Diels Institute of Organic Chemistry, Christian-Albrechts University, Otto Hahn Platz 4, 24118 Kiel, Germany
| | - Guido H Clever
- Department of Chemistry and Chemical Biology, TU Dortmund University, Otto Hahn Straße 6, 44227 Dortmund, Germany
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9
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Volarić J, Szymanski W, Simeth NA, Feringa BL. Molecular photoswitches in aqueous environments. Chem Soc Rev 2021; 50:12377-12449. [PMID: 34590636 PMCID: PMC8591629 DOI: 10.1039/d0cs00547a] [Citation(s) in RCA: 162] [Impact Index Per Article: 40.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2021] [Indexed: 12/17/2022]
Abstract
Molecular photoswitches enable dynamic control of processes with high spatiotemporal precision, using light as external stimulus, and hence are ideal tools for different research areas spanning from chemical biology to smart materials. Photoswitches are typically organic molecules that feature extended aromatic systems to make them responsive to (visible) light. However, this renders them inherently lipophilic, while water-solubility is of crucial importance to apply photoswitchable organic molecules in biological systems, like in the rapidly emerging field of photopharmacology. Several strategies for solubilizing organic molecules in water are known, but there are not yet clear rules for applying them to photoswitchable molecules. Importantly, rendering photoswitches water-soluble has a serious impact on both their photophysical and biological properties, which must be taken into consideration when designing new systems. Altogether, these aspects pose considerable challenges for successfully applying molecular photoswitches in aqueous systems, and in particular in biologically relevant media. In this review, we focus on fully water-soluble photoswitches, such as those used in biological environments, in both in vitro and in vivo studies. We discuss the design principles and prospects for water-soluble photoswitches to inspire and enable their future applications.
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Affiliation(s)
- Jana Volarić
- Centre for Systems Chemistry, Stratingh Institute for Chemistry, Faculty for Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands.
| | - Wiktor Szymanski
- Centre for Systems Chemistry, Stratingh Institute for Chemistry, Faculty for Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands.
- Department of Radiology, Medical Imaging Center, University of Groningen, University Medical Centre Groningen, Hanzeplein 1, 9713 GZ Groningen, The Netherlands
| | - Nadja A Simeth
- Centre for Systems Chemistry, Stratingh Institute for Chemistry, Faculty for Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands.
- Institute for Organic and Biomolecular Chemistry, University of Göttingen, Tammannstr. 2, 37077 Göttingen, Germany
| | - Ben L Feringa
- Centre for Systems Chemistry, Stratingh Institute for Chemistry, Faculty for Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands.
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10
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Klockmann F, Fangmann C, Zender E, Schanz T, Catapano C, Terfort A. Substituted Dibenzodiazocines: Rapid Synthesis and Photochemical Properties. ACS OMEGA 2021; 6:18434-18441. [PMID: 34308074 PMCID: PMC8296553 DOI: 10.1021/acsomega.1c02524] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/13/2021] [Accepted: 06/23/2021] [Indexed: 06/13/2023]
Abstract
11,12-Dihydrodibenzo[c,g]-1,2-diazocines have been established as a viable alternative to azobenzene for photoswitching, in particular, as they show an inverted switching behavior: the ground state is the Z isomer. In this paper, we present an improved method to obtain dibenzodiazocine and its derivatives from the respective 2-nitrotoluenes in two reaction steps, each proceeding in minutes. This fast access to a variety of derivatives permitted the study of substitution effects on the synthesis and on the photochemical properties. With biochemical applications in mind, methanol was chosen as a protic solvent system for the photochemical investigations. In contrast to the azobenzene system, none of the tested substitution patterns resulted in more efficient switching or in significantly prolonged half-lives, showing that the system is dominated by the ring strain.
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11
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Lentes P, Rudtke J, Griebenow T, Herges R. Substituted nitrogen-bridged diazocines. Beilstein J Org Chem 2021; 17:1503-1508. [PMID: 34239618 PMCID: PMC8239257 DOI: 10.3762/bjoc.17.107] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2021] [Accepted: 06/11/2021] [Indexed: 12/13/2022] Open
Abstract
Novel nitrogen-bridged diazocines (triazocines) were synthesized that carry a formyl or an acetyl group at the CH2NR-bridge and bromo- or iodo-substituents at the distant phenyl ring. The photophysical properties were investigated in acetonitrile and water. As compared to previous approaches the yields of the intramolecular azo cyclizations were increased (from ≈40 to 60%) using an oxidative approach starting from the corresponding aniline precursors. The Z→E photoconversion yields in acetonitrile are 80-85% and the thermal half-lives of the metastable E configurations are 31-74 min. Particularly, the high photoconversion yields (≈70%) of the water-soluble diazocines are noteworthy, which makes them promising candidates for applications in photopharmacology. The halogen substituents allow further functionalization via cross-coupling reactions.
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Affiliation(s)
- Pascal Lentes
- Otto Diels-Institute of Organic Chemistry, Christian Albrechts University Kiel, Otto-Hahn-Platz 4, 24118 Kiel, Germany
| | - Jeremy Rudtke
- Otto Diels-Institute of Organic Chemistry, Christian Albrechts University Kiel, Otto-Hahn-Platz 4, 24118 Kiel, Germany
| | - Thomas Griebenow
- Otto Diels-Institute of Organic Chemistry, Christian Albrechts University Kiel, Otto-Hahn-Platz 4, 24118 Kiel, Germany
| | - Rainer Herges
- Otto Diels-Institute of Organic Chemistry, Christian Albrechts University Kiel, Otto-Hahn-Platz 4, 24118 Kiel, Germany
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12
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Staubitz A, Walther M, Kipke W, Schultzke S, Ghosh S. Modification of Azobenzenes by Cross-Coupling Reactions. SYNTHESIS-STUTTGART 2021. [DOI: 10.1055/s-0040-1705999] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
AbstractAzobenzenes are among the most extensively used molecular switches for many different applications. The need to tailor them to the required task often requires further functionalization. Cross-coupling reactions are ideally suited for late-stage modifications. This review provides an overview of recent developments in the modification of azobenzene and its derivatives by cross-coupling reactions.1 Introduction2 Azobenzenes as Formally Electrophilic Components2.1 Palladium Catalysis2.2 Nickel Catalysis2.3 Copper Catalysis2.4 Cobalt Catalysis3 Azobenzenes as Formally Nucleophilic Components3.1 Palladium Catalysis3.2 Copper Catalysis3.3 C–H Activation Reactions4 Azobenzenes as Ligands in Catalysts5 Diazocines5.1 Synthesis5.2 Cross-Coupling Reactions6 Conclusion
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Affiliation(s)
- Anne Staubitz
- University of Bremen, Institute for Analytical and Organic Chemistry
- MAPEX Center for Materials and Processes
| | - Melanie Walther
- University of Bremen, Institute for Analytical and Organic Chemistry
- MAPEX Center for Materials and Processes
| | - Waldemar Kipke
- University of Bremen, Institute for Analytical and Organic Chemistry
- MAPEX Center for Materials and Processes
| | - Sven Schultzke
- University of Bremen, Institute for Analytical and Organic Chemistry
- MAPEX Center for Materials and Processes
| | - Souvik Ghosh
- University of Bremen, Institute for Analytical and Organic Chemistry
- MAPEX Center for Materials and Processes
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13
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Lentes P, Frühwirt P, Freißmuth H, Moormann W, Kruse F, Gescheidt G, Herges R. Photoswitching of Diazocines in Aqueous Media. J Org Chem 2021; 86:4355-4360. [DOI: 10.1021/acs.joc.1c00065] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Affiliation(s)
- Pascal Lentes
- Otto Diels-Institute of Organic Chemistry, Christian-Albrechts University Kiel, Otto Hahn Platz 4, 24118 Kiel, Germany
| | - Philipp Frühwirt
- Institute of Physical and Theoretical Chemistry, NAWI Graz, Graz University of Technology, Stremayrgasse 9, 8010 Graz, Austria
| | - Hilde Freißmuth
- Institute of Physical and Theoretical Chemistry, NAWI Graz, Graz University of Technology, Stremayrgasse 9, 8010 Graz, Austria
| | - Widukind Moormann
- Otto Diels-Institute of Organic Chemistry, Christian-Albrechts University Kiel, Otto Hahn Platz 4, 24118 Kiel, Germany
| | - Fabian Kruse
- Otto Diels-Institute of Organic Chemistry, Christian-Albrechts University Kiel, Otto Hahn Platz 4, 24118 Kiel, Germany
| | - Georg Gescheidt
- Institute of Physical and Theoretical Chemistry, NAWI Graz, Graz University of Technology, Stremayrgasse 9, 8010 Graz, Austria
| | - Rainer Herges
- Otto Diels-Institute of Organic Chemistry, Christian-Albrechts University Kiel, Otto Hahn Platz 4, 24118 Kiel, Germany
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14
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Photoswitchable Azo- and Diazocine-Functionalized Derivatives of the VEGFR-2 Inhibitor Axitinib. Int J Mol Sci 2020; 21:ijms21238961. [PMID: 33255816 PMCID: PMC7734574 DOI: 10.3390/ijms21238961] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2020] [Revised: 11/21/2020] [Accepted: 11/22/2020] [Indexed: 12/16/2022] Open
Abstract
In this study, we aimed at the application of the concept of photopharmacology to the approved vascular endothelial growth factor receptor (VEGFR)-2 kinase inhibitor axitinib. In a previous study, we found out that the photoisomerization of axitinib’s stilbene-like double bond is unidirectional in aqueous solution due to a competing irreversible [2+2]-cycloaddition. Therefore, we next set out to azologize axitinib by means of incorporating azobenzenes as well as diazocine moieties as photoresponsive elements. Conceptually, diazocines (bridged azobenzenes) show favorable photoswitching properties compared to standard azobenzenes because the thermodynamically stable Z-isomer usually is bioinactive, and back isomerization from the bioactive E-isomer occurs thermally. Here, we report on the development of different sulfur–diazocines and carbon–diazocines attached to the axitinib pharmacophore that allow switching the VEGFR-2 activity reversibly. For the best sulfur–diazocine, we could verify in a VEGFR-2 kinase assay that the Z-isomer is biologically inactive (IC50 >> 10,000 nM), while significant VEGFR-2 inhibition can be observed after irradiation with blue light (405 nm), resulting in an IC50 value of 214 nM. In summary, we could successfully develop reversibly photoswitchable kinase inhibitors that exhibit more than 40-fold differences in biological activities upon irradiation. Moreover, we demonstrate the potential advantage of diazocine photoswitches over standard azobenzenes.
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Preußke N, Moormann W, Bamberg K, Lipfert M, Herges R, Sönnichsen FD. Visible-light-driven photocontrol of the Trp-cage protein fold by a diazocine cross-linker. Org Biomol Chem 2020; 18:2650-2660. [PMID: 32207764 DOI: 10.1039/c9ob02442e] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Diazocines are characterized by extraordinary photochemical properties rendering them of particular interest for switching the conformation of biomolecules with visible light. Current developments afford synthetic access to unprecedented diazocine derivatives promising particular opportunities in photocontrol of proteins and biological systems. In this work, the well-established approach of photocontrolling the secondary structure of α-helices was exploited using a diazocine to reversibly fold and unfold the tertiary structure of a small protein. The protein of choice was the globulary folded Trp-cage, a widely used model system for the elucidation of protein folding pathways. A specifically designed, short and rigid dicarboxy-functionalized diazocine-based cross-linker was attached to two solvent-exposed side chains at the α-helix of the miniprotein through the use of a primary amine-selective active ester. This cross-linking strategy is orthogonal to the common cysteine-based chemistry. The cross-linked Trp-cage was successfully photoisomerized and exhibited a strong correlation between protein fold and diazocine isomeric state. As determined by NMR spectroscopy, the cis-isomer stabilized the fold, while the trans-isomer led to complete protein unfolding. The successful switching of the protein fold in principle demonstrates the ability to control protein function, as the activity depends on their structural integrity.
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Affiliation(s)
- Nils Preußke
- Otto-Diels-Institute for Organic Chemistry, Christian-Albrechts-University of Kiel, Otto-Hahn-Platz 4, 24118 Kiel, Germany.
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Burk MH, Schröder S, Moormann W, Langbehn D, Strunskus T, Rehders S, Herges R, Faupel F. Fabrication of Diazocine-Based Photochromic Organic Thin Films via Initiated Chemical Vapor Deposition. Macromolecules 2020. [DOI: 10.1021/acs.macromol.9b02443] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Maximilian H. Burk
- Institute for Materials Science, Christian-Albrechts-University, Kaiserstr. 2, 24143 Kiel, Germany
| | - Stefan Schröder
- Institute for Materials Science, Christian-Albrechts-University, Kaiserstr. 2, 24143 Kiel, Germany
| | - Widukind Moormann
- Otto-Diels-Institute for Organic Chemistry, Christian-Albrechts-University, Otto-Hahn-Platz 4, 24118 Kiel, Germany
| | - Daniel Langbehn
- Otto-Diels-Institute for Organic Chemistry, Christian-Albrechts-University, Otto-Hahn-Platz 4, 24118 Kiel, Germany
| | - Thomas Strunskus
- Institute for Materials Science, Christian-Albrechts-University, Kaiserstr. 2, 24143 Kiel, Germany
| | - Stefan Rehders
- Institute for Materials Science, Christian-Albrechts-University, Kaiserstr. 2, 24143 Kiel, Germany
| | - Rainer Herges
- Otto-Diels-Institute for Organic Chemistry, Christian-Albrechts-University, Otto-Hahn-Platz 4, 24118 Kiel, Germany
| | - Franz Faupel
- Institute for Materials Science, Christian-Albrechts-University, Kaiserstr. 2, 24143 Kiel, Germany
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Abstract
Ethylene bridged azobenzenes are novel, promising molecular switches that are thermodynamically more stable in the (Z) than in the (E) configuration, contrary to the linear azobenzene. However, their previous synthetic routes were often not general, and yields were poorly reproducible, and sometimes very low. Here we present a new synthetic strategy that is both versatile and reliable. Starting from widely available 2-bromobenzyl bromides, the designated molecules can be obtained in three simple steps.
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Affiliation(s)
- Shuo Li
- Otto-Diels-Institute for Organic Chemistry , University of Kiel , Otto-Hahn-Platz 4 , 24098 Kiel , Germany
| | - Nadi Eleya
- University of Bremen , Institute for Organic and Analytical Chemistry , Leobener Str. 7 , 28359 Bremen , Germany
| | - Anne Staubitz
- Otto-Diels-Institute for Organic Chemistry , University of Kiel , Otto-Hahn-Platz 4 , 24098 Kiel , Germany.,University of Bremen , Institute for Organic and Analytical Chemistry , Leobener Str. 7 , 28359 Bremen , Germany.,University of Bremen , MAPEX Center for Materials and Processes , Bibliothekstr. 1 , 28359 Bremen , Germany
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18
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Saha M, Chatterjee S, Hossain MS, Ghude A, Bandyopadhyay S. Modulation of Electronic Mobility of a One-Dimensional Coordination Polymeric Molecular Wire with Light. Chem Asian J 2019; 14:4659-4664. [PMID: 31392843 DOI: 10.1002/asia.201900956] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2019] [Revised: 08/04/2019] [Indexed: 11/09/2022]
Abstract
Metal ions often influence the photoswitching efficiency of a photochromic system. This article reports a one-dimensional polymer having cyclic azobenzenes coordinated to silver ions that are bridged by nitrates. The coordination polymer (CP-2) displays a photoresponsive behavior. The switching ability in the polymer form was faster compared to the parent azobenzene ligand without the metal ions. Azobenzenes are reported to be poorly conducting. Here, although the azobenzene ligand does not show significant electronic mobility, the coordination polymer (CP-2) displays a modest conductivity. The conductance in the cis form of the polymer is significantly higher compared to the trans form. Upon exposure to visible light, the cis form undergoes photoisomerization to the trans form with a drastic drop in the electronic mobility. The trans form can be reverted to the cis form thermally or by using UV light. Thus, this system offers a reversible control of the conductivity using light.
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Affiliation(s)
- Monochura Saha
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur, Nadia, 741246, India
| | - Sheelbhadra Chatterjee
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur, Nadia, 741246, India
| | - Munshi Sahid Hossain
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur, Nadia, 741246, India
| | - Arijeet Ghude
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur, Nadia, 741246, India
| | - Subhajit Bandyopadhyay
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur, Nadia, 741246, India
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Maier MS, Hüll K, Reynders M, Matsuura BS, Leippe P, Ko T, Schäffer L, Trauner D. Oxidative Approach Enables Efficient Access to Cyclic Azobenzenes. J Am Chem Soc 2019; 141:17295-17304. [PMID: 31584272 DOI: 10.1021/jacs.9b08794] [Citation(s) in RCA: 52] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Azobenzenes are versatile photoswitches that have found widespread use in a variety of fields, ranging from photopharmacology to the material sciences. In addition to regular azobenzenes, the cyclic diazocines have recently emerged. Although diazocines have fascinating conformational and photophysical properties, their use has been limited by their synthetic accessibility. Herein, we present a general, high-yielding protocol that relies on the oxidative cyclization of dianilines. In combination with a modular substrate synthesis, it allows for rapid access to diversely functionalized diazocines on gram scales. Our work systematically explores substituent effects on the photoisomerization and thermal relaxation of diazocines. It will enable their incorporation into a wide variety of functional molecules, unlocking the full potential of these emerging photoswitches. The method can be applied to the synthesis of a new cyclic azobenzene with a nine-membered central ring and distinct properties.
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Affiliation(s)
- Martin S Maier
- Department of Chemistry and Center for Integrated Protein Science (CIPSM) , Ludwig Maximilian University Munich , 81377 Munich , Germany
- Department of Chemistry , New York University , New York , New York 10003 , United States
| | - Katharina Hüll
- Department of Chemistry and Center for Integrated Protein Science (CIPSM) , Ludwig Maximilian University Munich , 81377 Munich , Germany
- Department of Chemistry , New York University , New York , New York 10003 , United States
| | - Martin Reynders
- Department of Chemistry and Center for Integrated Protein Science (CIPSM) , Ludwig Maximilian University Munich , 81377 Munich , Germany
- Department of Chemistry , New York University , New York , New York 10003 , United States
| | - Bryan S Matsuura
- Department of Chemistry and Center for Integrated Protein Science (CIPSM) , Ludwig Maximilian University Munich , 81377 Munich , Germany
- Department of Chemistry , New York University , New York , New York 10003 , United States
| | - Philipp Leippe
- Department of Chemistry and Center for Integrated Protein Science (CIPSM) , Ludwig Maximilian University Munich , 81377 Munich , Germany
| | - Tongil Ko
- Department of Chemistry , New York University , New York , New York 10003 , United States
| | - Lukas Schäffer
- Department of Chemistry and Center for Integrated Protein Science (CIPSM) , Ludwig Maximilian University Munich , 81377 Munich , Germany
| | - Dirk Trauner
- Department of Chemistry and Center for Integrated Protein Science (CIPSM) , Ludwig Maximilian University Munich , 81377 Munich , Germany
- Department of Chemistry , New York University , New York , New York 10003 , United States
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20
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Cabré G, Garrido-Charles A, González-Lafont À, Moormann W, Langbehn D, Egea D, Lluch JM, Herges R, Alibés R, Busqué F, Gorostiza P, Hernando J. Synthetic Photoswitchable Neurotransmitters Based on Bridged Azobenzenes. Org Lett 2019; 21:3780-3784. [DOI: 10.1021/acs.orglett.9b01222] [Citation(s) in RCA: 34] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Gisela Cabré
- Departament de Química, Universitat Autònoma de Barcelona (UAB), Cerdanyola del Vallès 08193, Spain
| | - Aida Garrido-Charles
- Institut de Bioenginyeria de Catalunya (IBEC), Barcelona Institute of Science and Technology (BIST), Barcelona 08036, Spain
| | - Àngels González-Lafont
- Departament de Química, Universitat Autònoma de Barcelona (UAB), Cerdanyola del Vallès 08193, Spain
- Institut de Biotecnologia i de Biomedicina (IBB), UAB, Cerdanyola del Vallès 08193, Spain
| | - Widukind Moormann
- Otto Diels-Institute of Organic Chemistry, Christian Albrechts University Kiel, Kiel 24118, Germany
| | - Daniel Langbehn
- Otto Diels-Institute of Organic Chemistry, Christian Albrechts University Kiel, Kiel 24118, Germany
| | - David Egea
- Departament de Química, Universitat Autònoma de Barcelona (UAB), Cerdanyola del Vallès 08193, Spain
| | - José M. Lluch
- Departament de Química, Universitat Autònoma de Barcelona (UAB), Cerdanyola del Vallès 08193, Spain
- Institut de Biotecnologia i de Biomedicina (IBB), UAB, Cerdanyola del Vallès 08193, Spain
| | - Rainer Herges
- Otto Diels-Institute of Organic Chemistry, Christian Albrechts University Kiel, Kiel 24118, Germany
| | - Ramon Alibés
- Departament de Química, Universitat Autònoma de Barcelona (UAB), Cerdanyola del Vallès 08193, Spain
| | - Félix Busqué
- Departament de Química, Universitat Autònoma de Barcelona (UAB), Cerdanyola del Vallès 08193, Spain
| | - Pau Gorostiza
- Institut de Bioenginyeria de Catalunya (IBEC), Barcelona Institute of Science and Technology (BIST), Barcelona 08036, Spain
- Institució Catalana de Recerca i Estudis Avançats (ICREA), Barcelona 08010, Spain
- Centro de Investigación Biomédica en Red en Bioingeniería, Biomateriales y Nanomedicina, Zaragoza 50018, Spain
| | - Jordi Hernando
- Departament de Química, Universitat Autònoma de Barcelona (UAB), Cerdanyola del Vallès 08193, Spain
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