1
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Torres AK, Mira RG, Pinto C, Inestrosa NC. Studying the mechanisms of neurodegeneration: C. elegans advantages and opportunities. Front Cell Neurosci 2025; 19:1559151. [PMID: 40207239 PMCID: PMC11979225 DOI: 10.3389/fncel.2025.1559151] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2025] [Accepted: 03/07/2025] [Indexed: 04/11/2025] Open
Abstract
Caenorhabditis elegans has been widely used as a model organism in neurodevelopment for several decades due to its simplicity, rapid growth, short life cycle, transparency, and rather simple genetics. It has been useful in modeling neurodegenerative diseases by the heterologous expression of the major proteins that form neurodegenerative-linked aggregates such as amyloid-β peptide, tau protein, and α-synuclein, among others. Furthermore, chemical treatments as well as the existence of several interference RNA libraries, transgenic worm lines, and the possibility of generating new transgenic strains create a magnificent range of possible tools to study the signaling pathways that could confer protection against protein aggregates or, on the contrary, are playing a detrimental role. In this review, we summarize the different C. elegans models of neurodegenerative diseases with a focus on Alzheimer's and Parkinson's diseases and how genetic tools could be used to dissect the signaling pathways involved in their pathogenesis mentioning several examples. Finally, we discuss the use of pharmacological agents in C. elegans models that could help to study these disease-associated signaling pathways and the powerful combinations of experimental designs with genetic tools. This review highlights the advantages of C. elegans as a valuable intermediary between in vitro and mammalian in vivo models in the development of potential new therapies.
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Affiliation(s)
- Angie K. Torres
- Centro de Excelencia en Biomedicina de Magallanes (CEBIMA), Escuela de Medicina, Universidad de Magallanes, Punta Arenas, Chile
- Departamento de Biología Celular y Molecular, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Rodrigo G. Mira
- Centro de Excelencia en Biomedicina de Magallanes (CEBIMA), Escuela de Medicina, Universidad de Magallanes, Punta Arenas, Chile
| | - Cristina Pinto
- Centro de Excelencia en Biomedicina de Magallanes (CEBIMA), Escuela de Medicina, Universidad de Magallanes, Punta Arenas, Chile
| | - Nibaldo C. Inestrosa
- Centro de Excelencia en Biomedicina de Magallanes (CEBIMA), Escuela de Medicina, Universidad de Magallanes, Punta Arenas, Chile
- Departamento de Biología Celular y Molecular, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile
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2
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Eberhard WG. Genital courtship and female-active roles in mating: sexual selection by mate choice in Caenorhabditis elegans. J Evol Biol 2024; 37:1137-1147. [PMID: 39275891 DOI: 10.1093/jeb/voae106] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2024] [Revised: 07/25/2024] [Accepted: 09/03/2024] [Indexed: 09/16/2024]
Abstract
A new bridge between studies of sexual selection and the massive literature on Caenorhabditis elegans behaviourand nervous system properties promise to provide important new insights into both fields. This paper shows that mate choice likely occurs in hermaphrodite C. elegans on the basis of stimulation from the male genital spicules, making it possible to apply the toolkit of extensive background knowledge of C. elegans and powerful modern techniques to test in unprecedented detail the leading hypotheses regarding one of the most sweeping trends in all of animal evolution, the especially rapid divergence of genital morphology. The recognition that sexual selection by mate choice may also occur in other contexts in C. elegans suggests additional payoffs from exploring previously unrecognized possibilities that female-active hermaphrodite reproductive behaviours are triggered by male stimulation. These facultative behaviours include attracting males, fleeing from or otherwise resisting males, opening the vulva to allow intromission, guiding sperm migration, avoiding rapid oviposition following copulation that results in sperm loss, expelling recently received sperm, and increasing feeding rates following copulation.
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Affiliation(s)
- William G Eberhard
- Smithsonian Tropical Research Institute, Ancon, Panama
- Biología, Universidad de Costa Rica, Ciudad Universitaria, Costa Rica
- Louisiana State University, Museum of Natural Sciences, Baton Rouge, LA 70808, USA
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3
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Palka JK, Dyba A, Brzozowska J, Antoł W, Sychta K, Prokop ZM. Evolution of fertilization ability in obligatorily outcrossing populations of Caenorhabditis elegans. PeerJ 2023; 11:e15825. [PMID: 37701823 PMCID: PMC10494835 DOI: 10.7717/peerj.15825] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2023] [Accepted: 07/10/2023] [Indexed: 09/14/2023] Open
Abstract
In species reproducing by selfing, the traits connected with outcrossing typically undergo degeneration, a phenomenon called selfing syndrome. In Caenorhabditis elegans nematodes, selfing syndrome affects many traits involved in mating, rendering cross-fertilization highly inefficient. In this study, we investigated the evolution of cross-fertilization efficiency in populations genetically modified to reproduce by obligatory outcrossing. Following the genetic modification, replicate obligatorily outcrossing were maintained for over 100 generations, at either optimal (20 °C) or elevated (24 °C) temperatures, as a part of a broader experimental evolution program. Subsequently, fertilization rates were assayed in the evolving populations, as well as their ancestors who had the obligatory outcrossing introduced but did not go through experimental evolution. Fertilization effectivity was measured by tracking the fractions of fertilized females in age-synchronized populations, through 8 h since reaching adulthood. In order to check the robustness of our measurements, each evolving population was assayed in two or three independent replicate blocks. Indeed, we found high levels of among-block variability in the fertilization trajectories, and in the estimates of divergence between evolving populations and their ancestors. We also identified five populations which appear to have evolved increased fertilization efficiency, relative to their ancestors. However, due to the abovementioned high variability, this set of populations should be treated as candidate, with further replications needed to either confirm or disprove their divergence from ancestors. Furthermore, we also discuss additional observations we have made concerning fertilization trajectories.
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Affiliation(s)
- Joanna K. Palka
- Institute of Environmental Sciences, Faculty of Biology, Jagiellonian University in Cracow, Cracow, Poland
| | - Alicja Dyba
- Institute of Environmental Sciences, Faculty of Biology, Jagiellonian University in Cracow, Cracow, Poland
| | - Julia Brzozowska
- Institute of Environmental Sciences, Faculty of Biology, Jagiellonian University in Cracow, Cracow, Poland
| | - Weronika Antoł
- Institute of Environmental Sciences, Faculty of Biology, Jagiellonian University in Cracow, Cracow, Poland
| | - Karolina Sychta
- Institute of Environmental Sciences, Faculty of Biology, Jagiellonian University in Cracow, Cracow, Poland
| | - Zofia M. Prokop
- Institute of Environmental Sciences, Faculty of Biology, Jagiellonian University in Cracow, Cracow, Poland
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4
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Santos J, Matos M, Flatt T, Chelo IM. Microbes are potential key players in the evolution of life histories and aging in Caenorhabditis elegans. Ecol Evol 2023; 13:e10537. [PMID: 37753311 PMCID: PMC10518755 DOI: 10.1002/ece3.10537] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2023] [Revised: 08/07/2023] [Accepted: 09/01/2023] [Indexed: 09/28/2023] Open
Abstract
Microbes can have profound effects on host fitness and health and the appearance of late-onset diseases. Host-microbe interactions thus represent a major environmental context for healthy aging of the host and might also mediate trade-offs between life-history traits in the evolution of host senescence. Here, we have used the nematode Caenorhabditis elegans to study how host-microbe interactions may modulate the evolution of life histories and aging. We first characterized the effects of two non-pathogenic and one pathogenic Escherichia coli strains, together with the pathogenic Serratia marcescens DB11 strain, on population growth rates and survival of C. elegans from five different genetic backgrounds. We then focused on an outbred C. elegans population, to understand if microbe-specific effects on the reproductive schedule and in traits such as developmental rate and survival were also expressed in the presence of males and standing genetic variation, which could be relevant for the evolution of C. elegans and other nematode species in nature. Our results show that host-microbe interactions have a substantial host-genotype-dependent impact on the reproductive aging and survival of the nematode host. Although both pathogenic bacteria reduced host survival in comparison with benign strains, they differed in how they affected other host traits. Host fertility and population growth rate were affected by S. marcescens DB11 only during early adulthood, whereas this occurred at later ages with the pathogenic E. coli IAI1. In both cases, these effects were largely dependent on the host genotypes. Given such microbe-specific genotypic differences in host life history, we predict that the evolution of reproductive schedules and senescence might be critically contingent on host-microbe interactions in nature.
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Affiliation(s)
- Josiane Santos
- cE3c – Centre for Ecology, Evolution and Environmental Changes & CHANGE – Global Change and Sustainability InstituteLisboaPortugal
- Departamento de Biologia Animal, Faculdade de CiênciasUniversidade de LisboaLisboaPortugal
| | - Margarida Matos
- cE3c – Centre for Ecology, Evolution and Environmental Changes & CHANGE – Global Change and Sustainability InstituteLisboaPortugal
- Departamento de Biologia Animal, Faculdade de CiênciasUniversidade de LisboaLisboaPortugal
| | - Thomas Flatt
- Department of BiologyUniversity of FribourgFribourgSwitzerland
| | - Ivo M. Chelo
- cE3c – Centre for Ecology, Evolution and Environmental Changes & CHANGE – Global Change and Sustainability InstituteLisboaPortugal
- Departamento de Biologia Animal, Faculdade de CiênciasUniversidade de LisboaLisboaPortugal
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5
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Yadav V, Sun S, Heitman J. On the evolution of variation in sexual reproduction through the prism of eukaryotic microbes. Proc Natl Acad Sci U S A 2023; 120:e2219120120. [PMID: 36867686 PMCID: PMC10013875 DOI: 10.1073/pnas.2219120120] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2022] [Accepted: 01/23/2023] [Indexed: 03/05/2023] Open
Abstract
Almost all eukaryotes undergo sexual reproduction to generate diversity and select for fitness in their population pools. Interestingly, the systems by which sex is defined are highly diverse and can even differ between evolutionarily closely related species. While the most commonly known form of sex determination involves males and females in animals, eukaryotic microbes can have as many as thousands of different mating types for the same species. Furthermore, some species have found alternatives to sexual reproduction and prefer to grow clonally and yet undergo infrequent facultative sexual reproduction. These organisms are mainly invertebrates and microbes, but several examples are also present among vertebrates suggesting that alternative modes of sexual reproduction evolved multiple times throughout evolution. In this review, we summarize the sex-determination modes and variants of sexual reproduction found across the eukaryotic tree of life and suggest that eukaryotic microbes provide unique opportunities to study these processes in detail. We propose that understanding variations in modes of sexual reproduction can serve as a foundation to study the evolution of sex and why and how it evolved in the first place.
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Affiliation(s)
- Vikas Yadav
- Department of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, NC27710
| | - Sheng Sun
- Department of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, NC27710
| | - Joseph Heitman
- Department of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, NC27710
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6
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Quevarec L, Réale D, Dufourcq‐Sekatcheff E, Car C, Armant O, Dubourg N, Adam‐Guillermin C, Bonzom J. Male frequency in Caenorhabditis elegans increases in response to chronic irradiation. Evol Appl 2022; 15:1331-1343. [PMID: 36187185 PMCID: PMC9488675 DOI: 10.1111/eva.13420] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2022] [Revised: 05/02/2022] [Accepted: 05/03/2022] [Indexed: 01/09/2023] Open
Abstract
Outcrossing can be advantageous in a changing environment because it promotes the purge of deleterious mutations and increases the genetic diversity within a population, which may improve population persistence and evolutionary potential. Some species may, therefore, switch their reproductive mode from inbreeding to outcrossing when under environmental stress. This switch may have consequences on the demographic dynamics and evolutionary trajectory of populations. For example, it may directly influence the sex ratio of a population. However, much remains to be discovered about the mechanisms and evolutionary implications of sex ratio changes in a population in response to environmental stress. Populations of the androdioecious nematode Caenorhabditis elegans, are composed of selfing hermaphrodites and rare males. Here, we investigate the changes in the sex ratio of C. elegans populations exposed to radioactive pollution for 60 days or around 20 generations. We experimentally exposed populations to three levels of ionizing radiation (i.e., 0, 1.4, and 50 mGy.h-1). We then performed reciprocal transplant experiments to evaluate genetic divergence between populations submitted to different treatments. Finally, we used a mathematical model to examine the evolutionary mechanisms that could be responsible for the change in sex ratio. Our results showed an increase in male frequency in irradiated populations, and this effect increased with the dose rate. The model showed that an increase in male fertilization success or a decrease in hermaphrodite self-fertilization could explain this increase in the frequency of males. Moreover, males persisted in populations after transplant back into the control conditions. These results suggested selection favoring outcrossing under irradiation conditions. This study shows that ionizing radiation can sustainably alter the reproductive strategy of a population, likely impacting its long-term evolutionary history. This study highlights the need to evaluate the impact of pollutants on the reproductive strategies of populations when assessing the ecological risks.
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Affiliation(s)
- Loïc Quevarec
- PSE‐ENV/SRTE/LECO, CadaracheInstitut de Radioprotection et de Sûreté Nucléaire (IRSN)Saint Paul Lez DuranceFrance
| | - Denis Réale
- Département des Sciences BiologiquesUniversité du Québec à MontréalMontréalQuebecCanada
| | | | - Clément Car
- PSE‐ENV/SRTE/LECO, CadaracheInstitut de Radioprotection et de Sûreté Nucléaire (IRSN)Saint Paul Lez DuranceFrance
| | - Olivier Armant
- PSE‐ENV/SRTE/LECO, CadaracheInstitut de Radioprotection et de Sûreté Nucléaire (IRSN)Saint Paul Lez DuranceFrance
| | - Nicolas Dubourg
- PSE‐ENV/SRTE/LECO, CadaracheInstitut de Radioprotection et de Sûreté Nucléaire (IRSN)Saint Paul Lez DuranceFrance
| | - Christelle Adam‐Guillermin
- PSE‐SANTE/SDOS/LMDN, CadaracheInstitut de Radioprotection et de Sûreté Nucléaire (IRSN)Saint Paul Lez DuranceFrance
| | - Jean‐Marc Bonzom
- PSE‐ENV/SRTE/LECO, CadaracheInstitut de Radioprotection et de Sûreté Nucléaire (IRSN)Saint Paul Lez DuranceFrance
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7
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Ke T, Santamaria A, Junior FB, Rocha JBT, Bowman AB, Aschner M. Methylmercury exposure-induced reproductive effects are mediated by dopamine in Caenorhabditis elegans. Neurotoxicol Teratol 2022; 93:107120. [PMID: 35987454 DOI: 10.1016/j.ntt.2022.107120] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2022] [Revised: 08/09/2022] [Accepted: 08/11/2022] [Indexed: 11/28/2022]
Abstract
Methylmercury (MeHg) is a neurotoxicant that exists in the natural environment, which level can be greatly increased because of human activity. MeHg exposures have the risk of being detrimental to the development of the nervous system. Studies on MeHg toxicity have largely focused on the mechanisms of its neurotoxicity following developmental exposures. Additionally, reproductive toxicity of developmental MeHg exposures has been noted in rodent models. The model organism Caenorhabditis elegans (C. elegans) is a self-fertilizing animal which has a short lifespan around 20 days. Most C. elegans are hermaphrodites that can generate both sperm and oocytes. To investigate the effects of developmental MeHg exposures on the reproduction in C. elegans, larvae stage 1 worms were exposed to MeHg (0, 0.01 or 0.05 μM) for 24 h. The laid eggs and oocytes were compared during each day at adult stages for 6 days. We showed that MeHg exposure significantly induced an increased number of eggs in day 1 adults without an effect on the timing of egg laying or the total number of eggs or oocytes over the 6-day period. The expression of dat-1 and cat-2 and dopamine levels were increased in worms exposed to MeHg. Supplementation with 100 μM dopamine recapitulated the effect of MeHg on the number of eggs present in day 1 adults. Furthermore, the effect of MeHg on the number of eggs was abrogated in the cat-2 mutant worms CB1112. The number of oocytes in the 6-day adult stages was decreased by MeHg in the dat-1 mutant RM2702. MeHg exposures did not change the mating rate or the number of offspring from mating. Combined, these novel findings show that developmental exposure to low levels of MeHg has limited effects on the reproduction in C. elegans. Furthermore, our data support a modulatory role of dopamine in MeHg-induced effects on reproduction in this model system.
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Affiliation(s)
- Tao Ke
- Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY 10461, United States
| | - Abel Santamaria
- Laboratorio de Aminoácidos Excitadores/Laboratorio de Neurofarmacología Molecular y Nanotecnología, Instituto Nacional de Neurología y Neurocirugía, 14269 Mexico City, Mexico
| | - Fernando Barbosa Junior
- Faculty of Pharmaceutical Sciences of Ribeirão Preto, University of São Paulo, Ribeirão Preto, SP 14040-900, Brazil
| | - João B T Rocha
- Departamento de Bioquímica e Biologia Molecular, Centro de Ciências Naturais e Exatas, Universidade Federal de Santa Maria, 97105900 Santa Maria, RS, Brazil
| | - Aaron B Bowman
- School of Health Sciences, Purdue University, West Lafayette, IN 47907-2051, United States
| | - Michael Aschner
- Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY 10461, United States.
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8
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Achache H, Falk R, Lerner N, Beatus T, Tzur YB. Oocyte aging is controlled by mitogen-activated protein kinase signaling. Aging Cell 2021; 20:e13386. [PMID: 34061407 PMCID: PMC8208789 DOI: 10.1111/acel.13386] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2020] [Revised: 03/25/2021] [Accepted: 05/08/2021] [Indexed: 12/11/2022] Open
Abstract
Oogenesis is one of the first processes to fail during aging. In women, most oocytes cannot successfully complete meiotic divisions already during the fourth decade of life. Studies of the nematode Caenorhabditis elegans have uncovered conserved genetic pathways that control lifespan, but our knowledge regarding reproductive aging in worms and humans is limited. Specifically, little is known about germline internal signals that dictate the oogonial biological clock. Here, we report a thorough characterization of the changes in the worm germline during aging. We found that shortly after ovulation halts, germline proliferation declines, while apoptosis continues, leading to a gradual reduction in germ cell numbers. In late aging stages, we observed that meiotic progression is disturbed and crossover designation and DNA double-strand break repair decrease. In addition, we detected a decline in the quality of mature oocytes during aging, as reflected by decreasing size and elongation of interhomolog distance, a phenotype also observed in human oocytes. Many of these altered processes were previously attributed to MAPK signaling variations in young worms. In support of this, we observed changes in activation dynamics of MPK-1 during aging. We therefore tested the hypothesis that MAPK controls oocyte quality in aged worms using both genetic and pharmacological tools. We found that in mutants with high levels of activated MPK-1, oocyte quality deteriorates more rapidly than in wild-type worms, whereas reduction of MPK-1 levels enhances quality. Thus, our data suggest that MAPK signaling controls germline aging and could be used to attenuate the rate of oogenesis quality decline.
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Affiliation(s)
- Hanna Achache
- Department of GeneticsInstitute of Life SciencesThe Hebrew University of JerusalemJerusalemIsrael
| | - Roni Falk
- Department of GeneticsInstitute of Life SciencesThe Hebrew University of JerusalemJerusalemIsrael
| | - Noam Lerner
- Department of NeurobiologyThe Institute of Life ScienceThe Hebrew University of JerusalemJerusalemIsrael
- The Alexander Grass Center for BioengineeringThe Rachel and Selim Benin School of Computer Science and EngineeringThe Hebrew University of JerusalemJerusalemIsrael
| | - Tsevi Beatus
- Department of NeurobiologyThe Institute of Life ScienceThe Hebrew University of JerusalemJerusalemIsrael
- The Alexander Grass Center for BioengineeringThe Rachel and Selim Benin School of Computer Science and EngineeringThe Hebrew University of JerusalemJerusalemIsrael
| | - Yonatan B. Tzur
- Department of GeneticsInstitute of Life SciencesThe Hebrew University of JerusalemJerusalemIsrael
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9
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Walsh JD, Boivin O, Barr MM. What about the males? the C. elegans sexually dimorphic nervous system and a CRISPR-based tool to study males in a hermaphroditic species. J Neurogenet 2020; 34:323-334. [PMID: 32648491 PMCID: PMC7796903 DOI: 10.1080/01677063.2020.1789978] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2020] [Accepted: 06/26/2020] [Indexed: 12/26/2022]
Abstract
Sexual dimorphism is a device that supports genetic diversity while providing selective pressure against speciation. This phenomenon is at the core of sexually reproducing organisms. Caenorhabditis elegans provides a unique experimental system where males exist in a primarily hermaphroditic species. Early works of John Sulston, Robert Horvitz, and John White provided a complete map of the hermaphrodite nervous system, and recently the male nervous system was added. This addition completely realized the vision of C. elegans pioneer Sydney Brenner: a model organism with an entirely mapped nervous system. With this 'connectome' of information available, great strides have been made toward understanding concepts such as how a sex-shared nervous system (in hermaphrodites and males) can give rise to sex-specific functions, how neural plasticity plays a role in developing a dimorphic nervous system, and how a shared nervous system receives and processes external cues in a sexually-dimorphic manner to generate sex-specific behaviors. In C. elegans, the intricacies of male-mating behavior have been crucial for studying the function and circuitry of the male-specific nervous system and used as a model for studying human autosomal dominant polycystic kidney disease (ADPKD). With the emergence of CRISPR, a seemingly limitless tool for generating genomic mutations with pinpoint precision, the C. elegans model system will continue to be a useful instrument for pioneering research in the fields of behavior, reproductive biology, and neurogenetics.
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Affiliation(s)
- Jonathon D Walsh
- Department of Genetics and Human Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ, USA
| | - Olivier Boivin
- Department of Genetics and Human Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ, USA
| | - Maureen M Barr
- Department of Genetics and Human Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ, USA
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10
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Gimond C, Vielle A, Silva-Soares N, Zdraljevic S, McGrath PT, Andersen EC, Braendle C. Natural Variation and Genetic Determinants of Caenorhabditis elegans Sperm Size. Genetics 2019; 213:615-632. [PMID: 31395653 PMCID: PMC6781899 DOI: 10.1534/genetics.119.302462] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2019] [Accepted: 08/04/2019] [Indexed: 01/28/2023] Open
Abstract
The diversity in sperm shape and size represents a powerful paradigm to understand how selection drives the evolutionary diversification of cell morphology. Experimental work on the sperm biology of the male-hermaphrodite nematode Caenorhabditis elegans has elucidated diverse factors important for sperm fertilization success, including the competitive superiority of larger sperm. Yet despite extensive research, the molecular mechanisms regulating C. elegans sperm size and the genetic basis underlying natural variation in sperm size remain unknown. To address these questions, we quantified male sperm size variation of a worldwide panel of 97 genetically distinct C. elegans strains, allowing us to uncover significant genetic variation in male sperm size. Aiming to characterize the molecular genetic basis of C. elegans male sperm size variation using a genome-wide association study, we did not detect any significant quantitative trait loci. We therefore focused on the genetic analysis of pronounced sperm size differences observed between recently diverged laboratory strains (N2 vs. LSJ1/2). Using mutants and quantitative complementation tests, we demonstrate that variation in the gene nurf-1 underlies the evolution of small sperm in the LSJ lineage. Given the previous discovery that this same nurf-1 variation was central for hermaphrodite laboratory adaptation, the evolution of reduced male sperm size in LSJ strains likely reflects a pleiotropic consequence. Together, our results provide a comprehensive quantification of natural variation in C. elegans sperm size and first insights into the genetic determinants of Caenorhabditis sperm size, pointing at an involvement of the NURF chromatin remodeling complex.
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Affiliation(s)
- Clotilde Gimond
- Université Côte d'Azur, CNRS, Inserm, IBV, Nice 06100, France
| | - Anne Vielle
- Université Côte d'Azur, CNRS, Inserm, IBV, Nice 06100, France
| | - Nuno Silva-Soares
- Université Côte d'Azur, CNRS, Inserm, IBV, Nice 06100, France
- Instituto Gulbenkian de Ciencia, 2780-156 Oeiras, Portugal
| | - Stefan Zdraljevic
- Department of Molecular Biosciences, Northwestern University, Evanston, Illinois 60208
| | - Patrick T McGrath
- School of Biological Sciences, Georgia Institute of Technology, Atlanta, Georgia 30332
| | - Erik C Andersen
- Department of Molecular Biosciences, Northwestern University, Evanston, Illinois 60208
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11
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Dolke F, Dong C, Bandi S, Paetz C, Glauser G, von Reuß SH. Ascaroside Signaling in the Bacterivorous Nematode Caenorhabditis remanei Encodes the Growth Phase of Its Bacterial Food Source. Org Lett 2019; 21:5832-5837. [PMID: 31305087 DOI: 10.1021/acs.orglett.9b01914] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
A novel class of species-specific modular ascarosides that integrate additional fatty acid building blocks was characterized in the nematode Caenorhabditis remanei using a combination of HPLC-ESI-(-)-MS/MS precursor ion scanning, microreactions, HR-MS/MS, MSn, and NMR techniques. The structure of the dominating component carrying a cyclopropyl fatty acid moiety was established by total synthesis. Biogenesis of this female-produced male attractant depends on cyclopropyl fatty acid synthase (cfa), which is expressed in bacteria upon entering their stationary phase.
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Affiliation(s)
- Franziska Dolke
- Department of Bioorganic Chemistry , Max Planck Institute for Chemical Ecology , Hans-Knöll Straße 8 , D-07745 Jena , Germany
| | - Chuanfu Dong
- Department of Bioorganic Chemistry , Max Planck Institute for Chemical Ecology , Hans-Knöll Straße 8 , D-07745 Jena , Germany
| | - Siva Bandi
- Laboratory for Bioanalytical Chemistry, Institute of Chemistry , University of Neuchâtel , Avenue de Bellevaux 51 , CH-2000 Neuchâtel , Switzerland
| | - Christian Paetz
- Research Group Biosynthesis/NMR , Max Planck Institute for Chemical Ecology , Hans-Knöll Straße 8 , D-07745 Jena , Germany
| | - Gaétan Glauser
- Neuchâtel Platform for Analytical Chemistry (NPAC) , University of Neuchâtel , Avenue de Bellevaux 51 , CH-2000 Neuchâtel , Switzerland
| | - Stephan H von Reuß
- Department of Bioorganic Chemistry , Max Planck Institute for Chemical Ecology , Hans-Knöll Straße 8 , D-07745 Jena , Germany.,Laboratory for Bioanalytical Chemistry, Institute of Chemistry , University of Neuchâtel , Avenue de Bellevaux 51 , CH-2000 Neuchâtel , Switzerland.,Neuchâtel Platform for Analytical Chemistry (NPAC) , University of Neuchâtel , Avenue de Bellevaux 51 , CH-2000 Neuchâtel , Switzerland
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12
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Teotónio H, Estes S, Phillips PC, Baer CF. Experimental Evolution with Caenorhabditis Nematodes. Genetics 2017; 206:691-716. [PMID: 28592504 PMCID: PMC5499180 DOI: 10.1534/genetics.115.186288] [Citation(s) in RCA: 60] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2016] [Accepted: 03/07/2017] [Indexed: 12/17/2022] Open
Abstract
The hermaphroditic nematode Caenorhabditis elegans has been one of the primary model systems in biology since the 1970s, but only within the last two decades has this nematode also become a useful model for experimental evolution. Here, we outline the goals and major foci of experimental evolution with C. elegans and related species, such as C. briggsae and C. remanei, by discussing the principles of experimental design, and highlighting the strengths and limitations of Caenorhabditis as model systems. We then review three exemplars of Caenorhabditis experimental evolution studies, underlining representative evolution experiments that have addressed the: (1) maintenance of genetic variation; (2) role of natural selection during transitions from outcrossing to selfing, as well as the maintenance of mixed breeding modes during evolution; and (3) evolution of phenotypic plasticity and its role in adaptation to variable environments, including host-pathogen coevolution. We conclude by suggesting some future directions for which experimental evolution with Caenorhabditis would be particularly informative.
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Affiliation(s)
- Henrique Teotónio
- Institut de Biologie de l´École Normale Supérieure (IBENS), Institut National de la Santé et de la Recherche Médicale U1024, Centre Nationnal de la Recherche Scientifique Unité Mixte de Recherche 8197, Paris Sciences et Lettres Research University, 75005 Paris, France
| | - Suzanne Estes
- Department of Biology, Portland State University, Oregon 97201
| | - Patrick C Phillips
- Institute of Ecology and Evolution, 5289 University of Oregon, Eugene, Oregon 97403, and
| | - Charles F Baer
- Department of Biology, and
- University of Florida Genetics Institute, University of Florida, Gainesville, Florida 32611
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13
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Abstract
Fertilization, the union of an oocyte and a sperm, is a fundamental process that restores the diploid genome and initiates embryonic development. For the sperm, fertilization is the end of a long journey, one that starts in the male testis before transitioning to the female reproductive tract's convoluted tubule architecture. Historically, motile sperm were thought to complete this journey using luck and numbers. A different picture of sperm has emerged recently as cells that integrate complex sensory information for navigation. Chemical, physical, and thermal cues have been proposed to help guide sperm to the waiting oocyte. Molecular mechanisms are being delineated in animal models and humans, revealing common features, as well as important differences. Exposure to pheromones and nutritional signals can modulate guidance mechanisms, indirectly impacting sperm motility performance and fertility. These studies highlight the importance of sensory information and signal transduction in fertilization.
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Affiliation(s)
- Hieu D Hoang
- Department of Cell, Developmental and Integrative Biology, University of Alabama at Birmingham School of Medicine, Birmingham, AL, USA
| | - Michael A Miller
- Department of Cell, Developmental and Integrative Biology, University of Alabama at Birmingham School of Medicine, Birmingham, AL, USA.
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14
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Aprison EZ, Ruvinsky I. Sex Pheromones of C. elegans Males Prime the Female Reproductive System and Ameliorate the Effects of Heat Stress. PLoS Genet 2015; 11:e1005729. [PMID: 26645097 PMCID: PMC4672928 DOI: 10.1371/journal.pgen.1005729] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2015] [Accepted: 11/16/2015] [Indexed: 12/26/2022] Open
Abstract
Pheromones are secreted molecules that mediate animal communications. These olfactory signals can have substantial effects on physiology and likely play important roles in organismal survival in natural habitats. Here we show that a blend of two ascaroside pheromones produced by C. elegans males primes the female reproductive system in part by improving sperm guidance toward oocytes. Worms have different physiological responses to different ratios of the same two molecules, revealing an efficient mechanism for increasing coding potential of a limited repertoire of molecular signals. The endogenous function of the male sex pheromones has an important side benefit. It substantially ameliorates the detrimental effects of prolonged heat stress on hermaphrodite reproduction because it increases the effectiveness with which surviving gametes are used following stress. Hermaphroditic species are expected to lose female-specific traits in the course of evolution. Our results suggest that some of these traits could have serendipitous utility due to their ability to counter the effects of stress. We propose that this is a general mechanism by which some mating-related functions could be retained in hermaphroditic species, despite their expected decay. The Caenorhabditis elegans metabolome contains over a hundred ascaroside molecules. Most of them have no known function, or no function at all, but some act as pheromones. Two of these molecules, ascr#10 and ascr#3, are produced in different proportions by males and hermaphrodites. We report that when a hermaphrodite senses a male-specific mixture of these molecules, it changes several aspects of its reproductive physiology, including signaling that guides sperm toward oocytes. During evolution from an ancestor that had both males and females, C. elegans hermaphrodites lost several female-specific traits, but their reproductive system retained the ability to respond to male pheromones. This greatly aids them during recovery from heat stress. We suggest that serendipitous side benefits of female-specific traits could be a general cause of their retention during evolution.
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Affiliation(s)
- Erin Z. Aprison
- Department of Ecology and Evolution, The University of Chicago, Chicago, Illinois, United States of America
| | - Ilya Ruvinsky
- Department of Ecology and Evolution, The University of Chicago, Chicago, Illinois, United States of America
- Department of Organismal Biology and Anatomy, The University of Chicago, Chicago, Illinois, United States of America
- * E-mail:
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15
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Noble LM, Chang AS, McNelis D, Kramer M, Yen M, Nicodemus JP, Riccardi DD, Ammerman P, Phillips M, Islam T, Rockman MV. Natural Variation in plep-1 Causes Male-Male Copulatory Behavior in C. elegans. Curr Biol 2015; 25:2730-7. [PMID: 26455306 DOI: 10.1016/j.cub.2015.09.019] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2015] [Revised: 09/07/2015] [Accepted: 09/08/2015] [Indexed: 10/23/2022]
Abstract
In sexual species, gametes have to find and recognize one another. Signaling is thus central to sexual reproduction and involves a rapidly evolving interplay of shared and divergent interests [1-4]. Among Caenorhabditis nematodes, three species have evolved self-fertilization, changing the balance of intersexual relations [5]. Males in these androdioecious species are rare, and the evolutionary interests of hermaphrodites dominate. Signaling has shifted accordingly, with females losing behavioral responses to males [6, 7] and males losing competitive abilities [8, 9]. Males in these species also show variable same-sex and autocopulatory mating behaviors [6, 10]. These behaviors could have evolved by relaxed selection on male function, accumulation of sexually antagonistic alleles that benefit hermaphrodites and harm males [5, 11], or neither of these, because androdioecy also reduces the ability of populations to respond to selection [12-14]. We have identified the genetic cause of a male-male mating behavior exhibited by geographically dispersed C. elegans isolates, wherein males mate with and deposit copulatory plugs on one another's excretory pores. We find a single locus of major effect that is explained by segregation of a loss-of-function mutation in an uncharacterized gene, plep-1, expressed in the excretory cell in both sexes. Males homozygous for the plep-1 mutation have excretory pores that are attractive or receptive to copulatory behavior of other males. Excretory pore plugs are injurious and hermaphrodite activity is compromised in plep-1 mutants, so the allele might be unconditionally deleterious, persisting in the population because the species' androdioecious mating system limits the reach of selection.
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Affiliation(s)
- Luke M Noble
- Department of Biology and Center for Genomics & Systems Biology, New York University, 12 Waverly Place, New York, NY 10003, USA
| | - Audrey S Chang
- Department of Biology and Center for Genomics & Systems Biology, New York University, 12 Waverly Place, New York, NY 10003, USA
| | - Daniel McNelis
- Department of Biology and Center for Genomics & Systems Biology, New York University, 12 Waverly Place, New York, NY 10003, USA
| | - Max Kramer
- Department of Biology and Center for Genomics & Systems Biology, New York University, 12 Waverly Place, New York, NY 10003, USA
| | - Mimi Yen
- Department of Biology and Center for Genomics & Systems Biology, New York University, 12 Waverly Place, New York, NY 10003, USA
| | - Jasmine P Nicodemus
- Department of Biology and Center for Genomics & Systems Biology, New York University, 12 Waverly Place, New York, NY 10003, USA
| | - David D Riccardi
- Department of Biology and Center for Genomics & Systems Biology, New York University, 12 Waverly Place, New York, NY 10003, USA
| | - Patrick Ammerman
- Department of Biology and Center for Genomics & Systems Biology, New York University, 12 Waverly Place, New York, NY 10003, USA
| | - Matthew Phillips
- Department of Biology and Center for Genomics & Systems Biology, New York University, 12 Waverly Place, New York, NY 10003, USA
| | - Tangirul Islam
- Department of Biology and Center for Genomics & Systems Biology, New York University, 12 Waverly Place, New York, NY 10003, USA
| | - Matthew V Rockman
- Department of Biology and Center for Genomics & Systems Biology, New York University, 12 Waverly Place, New York, NY 10003, USA.
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16
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Emmons SW. The development of sexual dimorphism: studies of the Caenorhabditis elegans male. WILEY INTERDISCIPLINARY REVIEWS. DEVELOPMENTAL BIOLOGY 2014; 3:239-62. [PMID: 25262817 PMCID: PMC4181595 DOI: 10.1002/wdev.136] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/20/2014] [Accepted: 04/02/2014] [Indexed: 01/09/2023]
Abstract
Studies of the development of the Caenorhabditis elegans male have been carried out with the aim of understanding the basis of sexual dimorphism. Postembryonic development of the two C. elegans sexes differs extensively. Development along either the hermaphrodite or male pathway is specified initially by the X to autosome ratio. The regulatory events initiated by this ratio include a male-determining paracrine intercellular signal. Expression of this signal leads to different consequences in three regions of the body: the nongonadal soma, the somatic parts of the gonad, and the germ line. In the nongonadal soma, activity of the key Zn-finger transcription factor TRA-1 determines hermaphrodite development; in its absence, the male pathway is followed. Only a few genes directly regulated by TRA-1 are currently known, including members of the evolutionarily conserved, male-determining DM domain Zn-finger transcription factors. In the somatic parts of the gonad and germ line, absence of TRA-1 activity is not sufficient for full expression of the male pathway. Several additional transcription factors involved have been identified. In the germ line, regulatory genes for sperm development that act at the level of RNA in the cytoplasm play a prominent role.
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Affiliation(s)
- Scott W. Emmons
- Albert Einstein College of Medicine 1300 Morris Park Ave. Bronx, New York 10461
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17
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O'Hagan R, Wang J, Barr MM. Mating behavior, male sensory cilia, and polycystins in Caenorhabditis elegans. Semin Cell Dev Biol 2014; 33:25-33. [PMID: 24977333 DOI: 10.1016/j.semcdb.2014.06.001] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2014] [Accepted: 06/04/2014] [Indexed: 11/16/2022]
Abstract
The investigation of Caenorhabditis elegans males and the male-specific sensory neurons required for mating behaviors has provided insight into the molecular function of polycystins and mechanisms that are needed for polycystin ciliary localization. In humans, polycystin 1 and polycystin 2 are needed for kidney function; loss of polycystin function leads to autosomal dominant polycystic kidney disease (ADPKD). Polycystins localize to cilia in C. elegans and mammals, a finding that has guided research into ADPKD. The discovery that the polycystins form ciliary receptors in male-specific neurons needed for mating behaviors has also helped to unlock insights into two additional exciting new areas: the secretion of extracellular vesicles; and mechanisms of ciliary specialization. First, we will summarize the studies done in C. elegans regarding the expression, localization, and function of the polycystin 1 and 2 homologs, LOV-1 and PKD-2, and discuss insights gained from this basic research. Molecules that are co-expressed with the polycystins in the male-specific neurons may identify evolutionarily conserved molecular mechanisms for polycystin function and localization. We will discuss the finding that polycystins are secreted in extracellular vesicles that evoke behavioral change in males, suggesting that such vesicles provide a novel form of communication to conspecifics in the environment. In humans, polycystin-containing extracellular vesicles are secreted in urine and can be taken up by cilia, and quickly internalized. Therefore, communication by polycystin-containing extracellular vesicles may also use mechanisms that are evolutionarily conserved from nematode to human. Lastly, different cilia display structural and functional differences that specialize them for particular tasks, despite the fact that virtually all cilia are built by a conserved intraflagellar transport (IFT) mechanism and share some basic structural features. Comparative analysis of the male-specific cilia with the well-studied cilia of the amphid and phasmid neurons has allowed identification of molecules that specialize the male cilia. We will discuss the molecules that shape the male-specific cilia. The cell biology of cilia in male-specific neurons demonstrates that C. elegans can provide an excellent model of ciliary specialization.
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Affiliation(s)
- Robert O'Hagan
- Department of Genetics, Rutgers, The State University of New Jersey, 145 Bevier Rd., Piscataway, NJ 08854
| | - Juan Wang
- Department of Genetics, Rutgers, The State University of New Jersey, 145 Bevier Rd., Piscataway, NJ 08854
| | - Maureen M Barr
- Department of Genetics, Rutgers, The State University of New Jersey, 145 Bevier Rd., Piscataway, NJ 08854
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18
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Wang J, Silva M, Haas LA, Morsci NS, Nguyen KCQ, Hall DH, Barr MM. C. elegans ciliated sensory neurons release extracellular vesicles that function in animal communication. Curr Biol 2014; 24:519-25. [PMID: 24530063 DOI: 10.1016/j.cub.2014.01.002] [Citation(s) in RCA: 175] [Impact Index Per Article: 15.9] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2013] [Revised: 11/26/2013] [Accepted: 01/02/2014] [Indexed: 01/06/2023]
Abstract
Cells release extracellular vesicles (ECVs) that play important roles in intercellular communication and may mediate a broad range of physiological and pathological processes. Many fundamental aspects of ECV biogenesis and signaling have yet to be determined, with ECV detection being a challenge and obstacle due to the small size (100 nm) of the ECVs. We developed an in vivo system to visualize the dynamic release of GFP-labeled ECVs. We show here that specific Caenorhabdidits elegans ciliated sensory neurons shed and release ECVs containing GFP-tagged polycystins LOV-1 and PKD-2. These ECVs are also abundant in the lumen surrounding the cilium. Electron tomography and genetic analysis indicate that ECV biogenesis occurs via budding from the plasma membrane at the ciliary base and not via fusion of multivesicular bodies. Intraflagellar transport and kinesin-3 KLP-6 are required for environmental release of PKD-2::GFP-containing ECVs. ECVs isolated from wild-type animals induce male tail-chasing behavior, while ECVs isolated from klp-6 animals and lacking PKD-2::GFP do not. We conclude that environmentally released ECVs play a role in animal communication and mating-related behaviors.
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Affiliation(s)
- Juan Wang
- Department of Genetics and The Human Genetics Institute of New Jersey, Rutgers University, 145 Bevier Road, Piscataway, NJ 08854, USA
| | - Malan Silva
- Department of Genetics and The Human Genetics Institute of New Jersey, Rutgers University, 145 Bevier Road, Piscataway, NJ 08854, USA
| | - Leonard A Haas
- Department of Genetics and The Human Genetics Institute of New Jersey, Rutgers University, 145 Bevier Road, Piscataway, NJ 08854, USA
| | - Natalia S Morsci
- Department of Genetics and The Human Genetics Institute of New Jersey, Rutgers University, 145 Bevier Road, Piscataway, NJ 08854, USA
| | - Ken C Q Nguyen
- Center for C. elegans Anatomy, Albert Einstein College of Medicine, 1410 Pelham Parkway, Bronx, NY 10461, USA
| | - David H Hall
- Center for C. elegans Anatomy, Albert Einstein College of Medicine, 1410 Pelham Parkway, Bronx, NY 10461, USA
| | - Maureen M Barr
- Department of Genetics and The Human Genetics Institute of New Jersey, Rutgers University, 145 Bevier Road, Piscataway, NJ 08854, USA.
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