Bioremediation of soil and water polluted by cyanide: A review

Subterranean marvels: microbial communities in caves and underground mines and their promise for natural product discovery

Covering: 2014 to 2024Since the dawn of human history, caves have played an intimate role in our existence. From our earliest ancestors seeking shelter from the elements to more recent generations harnessing cave substances for medicinal purposes, caves have served as essential resources and havens. The last 40 years of geomicrobiology research has replaced the outdated perception of subterranean environments as lifeless and unchanging with the realization that vibrant microbial communities have adapted to thrive in extreme conditions over millions of years. The ability of subterranean microbial communities to withstand nutrient deprivation and darkness creates a unique reservoir of untapped biosynthetic potential. These communities offer exciting prospects for medicine (e.g., antimicrobial and antitumor therapies) and biotechnology (e.g., redox chemical properties and biomineralization). This article highlights the significance of caves and mines as reservoirs of microbial diversity, the potential impact of their bioactive compounds on the fields of healthcare and biotechnology, and the significant challenges that must be overcome to access and harness the biotechnological potential of subterranean microbial communities. Additionally, it emphasizes the conservation efforts needed to protect these delicate ecosystems, ensuring the preservation of both ancient traditions and tomorrow's medicines.

Decoding cyanide toxicity: Integrating Quantitative Structure-Toxicity Relationships (QSTR) with species sensitivity distributions and q-RASTR modeling

Cyanide compounds are extensively used in industries like mining, metallurgy, and chemical synthesis, but their high toxicity presents serious environmental and health risks. This study applies advanced modeling techniques such as Quantitative Structure-Toxicity Relationship (QSTR), Species cyanide-Sensitivity Distribution (ScSD), and quantitative Read-Across Structure Toxicity (q-RASTR) to assess cyanide toxicity. A dataset of 25 cyanide salts was analyzed for acute, chronic, and lethal toxicity across species like humans, rats, and fish. Key molecular descriptors, including topological, geometrical, and electronic properties, were computed using ALOGPS 2.1, ChemAxon, and Elemental-Descriptor 1.0. Three machine learning methods MLR, PLS, and kNN were employed to develop predictive models. Further, q-RASTR models were developed to enhance the predictive power by similarity measures concept of the studied cyanides by integrating features from QSTR and ScSD models. These models were validated using external datasets, achieving high accuracy. Key descriptors such as refractivity, water solubility, and lipophilic components significantly influence cyanide toxicity. The combined QSTR, ScSD, and q-RASTR models provide a robust framework for predicting species-specific cyanide-sensitivity, enhancing our understanding of cyanide's molecular toxicity mechanisms. This research aids environmental risk assessment and informs safer regulatory strategies. The results are available for public access at https://nanosens.onrender.com/apps/calTox/index.html#/.

Algal-bacterial bioremediation of cyanide-containing wastewater in a continuous stirred photobioreactor

This study reports the isolation and characterization of highly resistant bacterial and microalgal strains from an Egyptian wastewater treatment station to cyanide-containing compounds. The bacterial strain was identified as Bacillus licheniformis by 16S rRNA gene sequencing. The isolate removed up to 1 g L-1 potassium cyanide, 3 g L-1 benzonitrile, and 1 g L-1 sodium salicylate when incubated as 10% v/v in MSM at 30 ℃. However, it failed to degrade potassium thiocyanate at all tested concentrations. The microalgal isolate was identified by electron microscopy as a strain of Chlorella spp.. Algal toxicity was tested by incubating the microalgae as 6% v/v in MSM containing 2 g L- 1 NaHCO3 with increasing concentrations of the pollutants. Results showed that 0.05 g L-1 KCN, 1.5 g L-1 benzonitrile, 5 g L -1 KSCN, and 5 g L-1 sodium salicylate inhibited 93%, 96%, 75%, and 21% of algal growth, respectively. In a continuous stirred photobioreactor, the bacterial-microalgal microcosm detoxified synthetic wastewater containing 0.2 g L-1 KCN, 0.1 g L-1 benzonitrile, and 0.5 g L-1 sodium salicylate in 3.5 days of hydraulic retention time. System failure was recorded when the KCN concentration was increased to 0.25 g L-1. The effluent had no inhibitory effect on the germination of Lepidium sativum seeds in phytotoxicity testing. Temperature, pH, and chitosan effects were assessed on the algal/bacterial settleability. Statistical analysis showed no significant difference between the tested parameters. The microcosm represents a potential candidate for the treatment of industrial wastewater containing cyanide compounds.

Bioremediation of metal cyanide complexes from electroplating wastewater for long-term application using Agrobacterium tumefaciens SUTS 1 and Pseudomonas monteilii SUTS 2

The purpose of this study was to investigate the optimum conditions, including aerobic and anoxic conditions, for operating a long-term bioreactor system to decrease the toxicity of industrial electroplating wastewater effluents containing metal cyanide using Agrobacterium tumefaciens SUTS 1 and Pseudomonas monteilii SUTS 2. The initial results revealed that bacteria performed better under aerobic conditions than under anoxic conditions. An aerobic bioreactor system was subsequently set up in a long-term study lasting 30 days under optimum operating conditions. Both mixed-culture bacteria and indigenous bacteria promoted the high-efficiency treatment of cyanide and metals in the first 7 days of the study. When the system had high removal rates, cyanide removal was greater than that of zinc, copper, nickel, and chromium (CN- > Zn > Cu > Ni > Cr), with removal efficiencies of 96.67%, 93.93%, 74.17%, 63.43%, and 44.65%, respectively, with residual concentrations of 0.15 ± 0.01, 0.24 ± 0.005, 0.03 ± 0.002, 18.41 ± 0.06 and 14.26 ± 0.15 mg/L, respectively. The cell concentration in the bioreactor increased to approximately 107 CFU/mL over 30 days from initial cell concentrations of 6.15 × 105 CFU/mL and 1.05 × 103 CFU/mL for the mixed culture and indigenous inoculation, respectively. These results implied that the bacteria were resistant to heavy metal toxicity. The addition of an appropriate carbon source with sufficient aeration to a bioreactor resulted in increased cyanide degradation.

Bacterial tolerance and detoxification of cyanide, arsenic and heavy metals: Holistic approaches applied to bioremediation of industrial complex wastes

Cyanide is a highly toxic compound that is found in wastewaters generated from different industrial activities, such as mining or jewellery. These residues usually contain high concentrations of other toxic pollutants like arsenic and heavy metals that may form different complexes with cyanide. To develop bioremediation strategies, it is necessary to know the metabolic processes involved in the tolerance and detoxification of these pollutants, but most of the current studies are focused on the characterization of the microbial responses to each one of these environmental hazards individually, and the effect of co-contaminated wastes on microbial metabolism has been hardly addressed. This work summarizes the main strategies developed by bacteria to alleviate the effects of cyanide, arsenic and heavy metals, analysing interactions among these toxic chemicals. Additionally, it is discussed the role of systems biology and synthetic biology as tools for the development of bioremediation strategies of complex industrial wastes and co-contaminated sites, emphasizing the importance and progress derived from meta-omic studies.

Use of limekiln dust in the stabilization of heavy metals in Ghanaian gold oxide ore mine tailings

Remedial action for heavy metal-contaminated soils is imperative for preventing heavy metal leachability and minimizing environmental risks. This study evaluated the use of limekiln dust (LKD) as a heavy metal stabilization agent for Ghanaian gold mine oxide ore tailing material. Heavy metal-laden tailing material (Fe, Ni, Cu, Cd, and Hg) was collected from a tailing dam site in Ghana. Stabilization was done using acid neutralization capacity (ANC) and citric acid test (CAT) while all chemical characterization was done using X-ray fluorescence (XRF) spectroscopy. Various physicochemical parameters including pH, EC, and temperature were also measured. The contaminated soils were amended with LKD in doses of 5, 10, 15, and 20 wt.%. The results revealed that the contaminated soils had concentrations of heavy metals above FAO/WHO stipulated limits of 350, 35, 36, 0.8, and 0.3 mg/kg for Fe, Ni, Cu, Cd, and Hg, respectively. After 28 days of curing, 20 wt.% of LKD was found to be appropriate for the remediation of the mine tailings of all the heavy metals studied except Cd. Ten percent of the LKD was noticed to be enough in remedying soil contaminated with Cd since the Cd's concentration reduced from 9.1 to 0.0 mg/kg with a stabilizing efficiency of 100% and a leaching factor of 0.0. Therefore, remediation of contaminated soils of Fe, Cu, Ni, Cd, and Hg with LKD is safe and environmentally friendly.

Fresh cassava root replacing cassava chip could enhance milk production of lactating dairy cows fed diets based on high sulfur-containing pellet

The experiment objective was to assess the shifting effect from cassava chip (CC) to fresh cassava root (FC) affected feed utilization, rumen metabolism, cyanide-using bacteria, and milk quality in lactating Thai Friesian dairy cows fed diets based on high sulfur-containing pellet (PS). Four lactating Thai Friesian dairy cows of 481.5 ± 31.3 kg BW (about 4 years old were allocated with four treatments in a 4 × 4 Latin square design. The four treatments were: replacement FC for CC at 0%, 60%, 80%, and 100% dry matter (DM), respectively. Feed intakes for four diets in terms of total dry matter intake (kg/day and % BW) was linearly correlated with levels of replacement of FC (p < 0.01). Digestibilities of crude protein (CP), DM, organic matter (OM), amylase-treated neutral detergent fiber (aNDF), and acid detergent fiber (ADF) did not change with increasing levels of FC in the diet (p > 0.05). Moreover, the total bacterial counts and cyanide population utilizing bacteria cubically increased with an increase of FC replacement (p < 0.01). The effect of CC substitution with FC in the PS diet was cubically increased on blood thiocyanate concentrations (p < 0.01). In addition, the propionate (C3) concentration at 0 and 4 h post-feeding changed significantly among treatments (p < 0.01), which were linearly improved with an increasing dose of replacement FC and were highest when FC was replaced at 100%. The yield of 3.5% fat-corrected milk was high in the treatment with the replacement of FC as compared to the control (p < 0.01). The yield of fat and milk fat percentages was high (p < 0.01) in the group with the replacement of FC as compared to feed with no diet replaced. The milk thiocyanate concentration was cubically enhanced when levels of FC replacement increased (p < 0.01) and was the highest when FC was replaced at 100%. As the amount of FC replacement was raised, the somatic cell count in the milk decreased linearly (p < 0.01). In conclusion, the replacement of FC at 100% in PS could enhance the feed intake, microbial populations, total volatile fatty acid (VFA), C3 concentration, milk yield, and milk quality.

Determination of exposure to major iodide ion uptake inhibitors through drinking waters

Goiter, abnormal enlargement of the thyroid gland, is a significant worldwide public health problem. Iodine deficiency is known as the most common cause. Iodine is actively transported as iodide ion (I^-) using Sodium Iodide Symporter (NIS) and sufficient blocking of I^- transportation prevents the synthesis of thyroid hormones. The transportation can be blocked by some polyatomic anions known as I^- uptake inhibitors. Perchlorate (ClO₄^-), thiocyanate (SCN^-) and nitrate (NO₃^-) are reported as the major I^- uptake inhibitors and exposure could be through various routes. Drinking water is an important exposure route. Since water is essential to sustain life, drinking water safety is very important for the protection of public health. However, as a result of natural and human-based processes, water can be contaminated and contamination of drinking water is a global food safety problem due to causing significant health and environmental problemsIn that context, this study aims to determine exposure levels to I^- uptake inhibitors that arise from drinking waters at five different districts in Antalya, Turkey. Collected water samples contained NO₃^- and ClO₄^- in the range of 0.86-47.42 mg/L and <LOQ-0.11 mg/L, respectively. SCN^- levels were <LOQ in all samples. Daily exposure was calculated for different age groups of 2-65+ years using contaminant levels, water consumption and body weight data. Mean NO₃^- and ClO₄^- exposure levels were in the range of 115.89-375.06 and 0.07-0.22 μg/kg bw/d, respectively. Exposure levels were decreased with increasing age and the highest exposure levels were calculated for children due to their lower body weight. Although no risk was determined for the I^- uptake inhibitors in tested locations based on the guideline values recommended by EPA and WHO, there has been a need for more exposure assessment studies in the areas where the high prevalence of goiter is observed all over the world.

Excited State Intramolecular Proton Transfer (ESIPT)-Based Sensor for Ion Detection

C-2 and C-5 substituted imidazole skeleton was synthesized through a one-pot two-step strategy. Synthesized molecule emits the light on ESIPT (excited-state intramolecular proton transfer). This molecule was utilized for its proton donor ability, and we have observed that fluoride and cyanide ions can be detected selectively. Different cations and anions were selected to observe the response of the synthesized molecule. However, there were not any fluorometric and colorimetric response except for fluoride and cyanide ions. Detection limits of fluoride and cyanide ions were found to be 9.22 μM and 11.48 μM, respectively. ¹H-NMR spectra for the solution of the sensor and TBAF (tetrabuthylammoniumfluoride) were used for the identification of [L]^-[HF₂]^- species. 3 equiv. TBAF saturated the solution of the sensor in d₆-DMSO, and some of the proton resonances shifted to upfield due to the through-bond effect. The disappearance of NH proton with 0.5 equiv. TBAF or TBACN (tetrabuthylammoniumcyanide) showed that there was a proton abstraction by fluoride and cyanide ions, instead of the hydrogen bond. Solid-state application was utilized, and paper test strips were applied. Emission differences emerged when the sensor loaded strips were reacted with TBAF. Time resolved experiments revealed that solution of the sensor and TBAF in DMSO have multiexponential decay, and one of the lifetime was measured as 13.4 ns.

Screening of Cyanide-Utilizing Bacteria from Rumen and In Vitro Evaluation of Fresh Cassava Root Utilization with Pellet Containing High Sulfur Diet

Two experiments were undertaken to screen for ruminal cyanide-utilizing bacteria (Experiment 1), and to evaluate the influence of fresh cassava root (FCR) and pellets containing high sulfur (PELFUR) on cyanide content, gas production parameters, in vitro degradability, and ruminal fermentation (Experiment 2). Experiment 1 was conducted in a completely randomized design (CRD) for the screening of cyanide-utilizing bacteria and the dietary treatments consisted of cyanide at 0, 150, 300, and 450 ppm. In Experiment 2, a 5 × 3 factorial arrangement in a completely randomized design was used for the in vitro study. Factor A was the level of FCR at 0, 260, 350, 440, and 530 g/kg of dry matter (DM) substrate, and factor B was the level of PELFUR at 0, 15, and 30 g/kg DM substrate. In Experiment 1, adding different doses of cyanide significantly affected cyanide-utilizing rumen bacterial growth (p < 0.05). Increasing the concentration of cyanide from 0 to 150 and 150 to 300 ppm resulted in increases in cyanide-utilizing rumen bacteria of 38.2% and 15.0%, respectively. In Experiment 2, no interaction effects were found between FCR and PELFUR doses on gas production parameters (p > 0.05). Increasing the FCR level to more than 260 g/kg of DM substrate could increase cumulative gas production (p < 0.05). Increasing doses of PELFUR from 15 to 30 g/kg increased the cumulative gas production when compared with that of 0 g PELFUR/kg of DM substrate (p < 0.05). The cyanide concentration in rumen fluid decreased with PELFUR (p < 0.05) supplementation. Degradability of in vitro DM and organic matter following incubation increased at 12 and 24 h due to PELFUR supplementation with FCR and increased additionally with 15 g PELFUR/kg of DM substrate (p < 0.05) in 440 g FCR/kg of DM substrate. Proportions of the total volatile fatty acids, acetic acid (C2), propionic acid (C3), and butyric acid among supplementations with FCR (p < 0.05) were significantly different. In conclusion, the present results represent the first finding of bacteria in the rumen that are capable of utilizing cyanide, and suggests that cyanide might function as a nitrogen source for bacterial cell synthesis. The inclusion of FCR of 530 g/kg with 30 g PELFUR/kg of DM substrate could increase the cumulative gas production, the bacterial population, the in vitro degradability, the proportion of C3, and the rate of the disappearance of cyanide.

Un-steady state modeling for free cyanide removal and biofilm growth in a RBC batch process

Biofilm growth and free cyanide biological removal from gold mine wastewater were modeled and simulated using a bench-scale rotating biological contactor (RBC). Eight batch cultures were run in three independent compartments (1.7 L, each) of the RBC. The system worked under the following conditions: [CN_i^-] = 0.3 g/L, pH = 10.5 ± 0.5, T = 20 ± 5 °C, ω =5 rpm, and 40.5 % of disc submersion. During each culture, biofilm thickness, biomass, and free cyanide concentration in the liquid were quantified. Subsequently, μ_max, [Formula: see text] , [Formula: see text] were determined using experimental data to later model and simulate the biofilm thickness and free cyanide biological removal with Wolfram Mathematica software. After the experiments, free cyanide biological removal was 96.33 % after three days, and maximum biofilm thickness was 0.0292 cm in the 16th day. Moreover, biofilm growth and free cyanide consumption models were adjusted to the experimental data with r² = 0.90 and r² = 0.99. Also, there was an equivalent error of 7.89 and 7.38 and a standard deviation of 10.89 % and 10.17 %, between the models and their experimental data, respectively. Finally, the proposed models will allow improvement of reactor operation and its design.

Performance of various cyanide degrading bacteria on the biodegradation of free cyanide in water

This study reports on the biodegradation of free cyanide (FCN) by cyanide degrading bacteria (CDB) that were isolated from mining wastewater and thiocyanate containing wastewater. The performance of these isolates was compared to cryopreserved CDBs that were used in previous studies. The performance of the isolates to degrade FCN was studied in batch cultures. It was observed that the CDB from the thiocyanate wastewater showed higher biodegradation rates (2.114 g CN^-. L^-1.O.D_600 nm^-1.h^-1) compared to the isolates from the mining wastewater. The isolates from the cryopreserved CDBs and from the mining wastewater achieved a biodegradation rate of 1.285 g CN^- L^-1.O.D_600 nm^-1.h^-1 and 1.209 g CN^-.L^-1.O.D_600 nm^-1.h^-1, respectively. This study demonstrated that the source of the organisms plays a significant role on FCN biodegradation.

Industrial textile effluent treatment and antibacterial effectiveness of Zea mays L. Dry husk mediated bio-synthesized copper oxide nanoparticles

Zea mays L. dry husk extract was used to bio synthesize copper oxide nanoparticles. Red coloured cubic Cu₂O nanoparticles were obtained for the first time via this simple, eco- friendly, green synthesis route. The Cu₂O nanoparticles were thermally oxidized to pure monoclinic CuO nanoparticles at 600 °C. The phases of the copper oxides were confirmed from the x-ray diffraction (XRD) studies. The nanoparticle sizes as obtained from high resolution transmission electron microscope (HRTEM) analysis range from 10 to 26 nm, 36-73 nm and 30-90 nm for the unannealed Cu₂O, 300 °C and 600 °C annealed CuO respectively. The values of the bandgap energies obtained from diffuse reflectance of the nanoparticles are 2.0, 1.30 and 1.42 eV respectively for the unannealed, 300 °C, and 600 °C annealed copper oxide nanoparticles. The 600 °C annealed copper oxide nanoparticles showed 91% and 90% degradation ability for methylene blue dye (BM) and textile effluent (TE) respectively under visible light irradiation. While CuO_300 is more effective to inhibit the growth of Escherichia coli 518,133 and Staphylococcus aureus 9144, Cu₂O is better for Pseudomonas aeruginosa and Bacillus licheniformis. The results confirm the photo-catalytic and anti-microbial effectiveness of the copper oxide nanoparticles.