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Mori T, Riga A, Aytek AI, Harvati K. Virtual reconstruction and geometric morphometric analysis of the Kocabaş hominin fossil from Turkey: Implications for taxonomy and evolutionary significance. J Hum Evol 2024; 191:103517. [PMID: 38781712 DOI: 10.1016/j.jhevol.2024.103517] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2022] [Revised: 11/24/2023] [Accepted: 02/26/2024] [Indexed: 05/25/2024]
Abstract
The Kocabaş specimen comes from a travertine quarry near the homonymous village in the Denizli basin (Turkey). The specimen comprises three main fragments: portions of the right and left parietal and left and right parts of the frontal bone. The fossil was assumed to belong to the Homo erectus s.l. hypodigm by some authors, whereas others see similarities with Middle Pleistocene fossils (Broken Hill 1/Kabwe, Bodo, or Ceprano). Here, we present the first attempt to make a complete reconstruction of the missing medial portion of the frontal bone and a comprehensive geometric morphometric analysis of this bone. We restored the calotte by aligning and mirroring the three preserved fragments. Afterward, we restored the missing portion by applying the thin-plate spline interpolation algorithm of target fossils onto the reconstructed Kocabaş specimen. For the geometric morphometric analyses, we collected 80 landmarks on the frontal bone (11 osteometric points, 14 bilateral curve semilandmarks, and 41 surface semilandmarks). The comparative sample includes 21 fossils from different chronological periods and geographical areas and 30 adult modern humans from different populations. Shape analyses highlighted the presence in Kocabaş of features usually related to Middle Pleistocene Homo, such as a developed supraorbital torus associated with a relatively short frontal squama and reduced post-toral sulcus. Cluster analysis and linear discriminant analysis classification procedure suggest Kocabaş being part of the same taxonomic unit of Eurasian and African Middle Pleistocene Homo. In light of our results, we consider that attributing the Kocabaş hominin to H. erectus s.l. may be unwarranted. Results of our analyses are compatible with different evolutionary scenarios, but a more precise chronological framework is needed for a thorough discussion of the evolutionary significance of this specimen. Future work should clarify its geological age, given uncertainties regarding its stratigraphic provenance.
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Affiliation(s)
- Tommaso Mori
- Paleoanthropology, Institute for Archaeological Sciences and Senckenberg Centre for Human Evolution and Palaeoenvironment, Eberhard Karls University of Tübingen, Rümelinstraasse 23, 72072, Tübingen, Germany; Anthropology Laboratory, Department of Biology, University of Florence, Via del Proconsolo 12, 50122, Florence, Italy.
| | - Alessandro Riga
- Anthropology Laboratory, Department of Biology, University of Florence, Via del Proconsolo 12, 50122, Florence, Italy
| | - Ahmet Ihsan Aytek
- Department of Anthropology, Burdur Mehmet Akif Ersoy University, Faculty of Arts and Science, TR-15030, Burdur, Turkey
| | - Katerina Harvati
- Paleoanthropology, Institute for Archaeological Sciences and Senckenberg Centre for Human Evolution and Palaeoenvironment, Eberhard Karls University of Tübingen, Rümelinstraasse 23, 72072, Tübingen, Germany; DFG Centre for Advanced Studies "Words, Bones, Genes, Tools", Eberhard Karls University of Tübingen, Rümelinstraasse 23, 72072, Tübingen, Germany
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Delezene LK, Scott JE, Irish JD, Villaseñor A, Skinner MM, Hawks J, Berger LR. Sex-biased sampling may influence Homo naledi tooth size variation. J Hum Evol 2024; 187:103490. [PMID: 38266614 DOI: 10.1016/j.jhevol.2023.103490] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Revised: 12/20/2023] [Accepted: 12/21/2023] [Indexed: 01/26/2024]
Abstract
A frequent source of debate in paleoanthropology concerns the taxonomic unity of fossil assemblages, with many hominin samples exhibiting elevated levels of variation that can be interpreted as indicating the presence of multiple species. By contrast, the large assemblage of hominin fossils from the Rising Star cave system, assigned to Homo naledi, exhibits a remarkably low degree of variation for most skeletal elements. Many factors can contribute to low sample variation, including genetic drift, strong natural selection, biased sex ratios, and sampling of closely related individuals. In this study, we tested for potential sex-biased sampling in the Rising Star dental sample. We compared coefficients of variation for the H. naledi teeth to those for eight extant hominoid samples. We used a resampling procedure that generated samples from the extant taxa that matched the sample size of the fossil sample for each possible Rising Star dental sex ratio. We found that variation at four H. naledi tooth positions-I2, M1, P4, M1-is so low that the possibility that one sex is represented by few or no individuals in the sample cannot be excluded. Additional evidence is needed to corroborate this inference, such as ancient DNA or enamel proteome data, and our study design does not address other potential factors that would account for low sample variation. Nevertheless, our results highlight the importance of considering the taphonomic history of a hominin assemblage and suggest that sex-biased sampling is a plausible explanation for the low level of phenotypic variation found in some aspects of the current H. naledi assemblage.
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Affiliation(s)
- Lucas K Delezene
- Department of Anthropology, University of Arkansas, Fayetteville, AR, 72701, USA; Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Private Bag 3, WITS, 2050, South Africa.
| | - Jeremiah E Scott
- Department of Medical Anatomical Sciences, College of Osteopathic Medicine of the Pacific, Western University of Health Sciences, Pomona, CA, 91766, USA
| | - Joel D Irish
- Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Private Bag 3, WITS, 2050, South Africa; School of Biological and Environmental Sciences, Liverpool John Moores University, Liverpool, L3 3AF, UK
| | - Amelia Villaseñor
- Department of Anthropology, University of Arkansas, Fayetteville, AR, 72701, USA
| | - Matthew M Skinner
- Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Private Bag 3, WITS, 2050, South Africa; Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, 04103, Leipzig, Germany
| | - John Hawks
- Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Private Bag 3, WITS, 2050, South Africa; Department of Anthropology, University of Wisconsin-Madison. Madison, WI, 53706, USA
| | - Lee R Berger
- Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Private Bag 3, WITS, 2050, South Africa; National Geographic Society, 1145 17th Street NW, Washington DC, 20036, USA
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Brophy JK, Bolter DR, Elliott M, Hawks J, Berger LR. An examination of Homo naledi early juveniles recovered from the Rising Star cave system, South Africa. Ann Hum Biol 2024; 51:2321128. [PMID: 38509686 DOI: 10.1080/03014460.2024.2321128] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2023] [Accepted: 02/06/2024] [Indexed: 03/22/2024]
Abstract
BACKGROUND Six Homo naledi early juveniles were recovered from U.W. 101 (Dinaledi Chamber), U.W. 102 (Lesedi Chamber), and U.W. 110 in the Rising Star cave system. AIM This paper develops the information for the H. naledi early juvenile life stage, as defined by a combination of deciduous and permanent dentition, and the eruption of the first permanent molar. SUBJECTS AND METHODS The growing number of young individuals recovered from the Rising Star cave system allows us to gain a better understanding of their variation, or lack thereof, and provides a basis to estimate broad ranges for age at death of the individuals. The individuals are identified and described through craniodental remains and spatial associations. RESULTS AND CONCLUSION Our results show that the teeth are remarkably consistent across the localities in their metric and non-metric traits, and our analyses refine previous estimations on dental eruptions with the first permanent molar erupting first in the sequence among permanent teeth.
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Affiliation(s)
- Juliet K Brophy
- Department of Geography and Anthropology, LA State University, Baton Rouge, LA, USA
- The Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Johannesburg, South Africa
| | - Debra R Bolter
- The Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Johannesburg, South Africa
- Department of Anthropology, Modesto Junior College, Modesto, CA, USA
- Department of Anthropology, CA State University Stanislaus, Turlock, CA, USA
| | - Marina Elliott
- The Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Johannesburg, South Africa
- Department of Archaeology, Simon Fraser University, Burnaby, BC, Canada
| | - John Hawks
- The Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Johannesburg, South Africa
- Department of Anthropology, University of WI-Madison, Madison, WI, USA
| | - Lee R Berger
- The Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Johannesburg, South Africa
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Macionis V. Fetal head-down posture may explain the rapid brain evolution in humans and other primates: An interpretative review. Brain Res 2023; 1820:148558. [PMID: 37634686 DOI: 10.1016/j.brainres.2023.148558] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2023] [Revised: 08/22/2023] [Accepted: 08/24/2023] [Indexed: 08/29/2023]
Abstract
Evolutionary cerebrovascular consequences of upside-down postural verticality of the anthropoid fetus have been largely overlooked in the literature. This working hypothesis-based report provides a literature interpretation from an aspect that the rapid evolution of the human brain has been promoted by fetal head-down position due to maternal upright and semi-upright posture. Habitual vertical torso posture is a feature not only of humans, but also of monkeys and non-human apes that spend considerable time in a sitting position. Consequently, the head-down position of the fetus may have caused physiological craniovascular hypertension that stimulated expansion of the intracranial vessels and acted as an epigenetic physiological stress, which enhanced neurogenesis and eventually, along with other selective pressures, led to the progressive growth of the anthropoid brain and its organization. This article collaterally opens a new insight into the conundrum of high cephalopelvic proportions (i.e., the tight fit between the pelvic birth canal and fetal head) in phylogenetically distant lineages of monkeys, lesser apes, and humans. Low cephalopelvic proportions in non-human great apes could be accounted for by their energetically efficient horizontal nest-sleeping and consequently by their larger body mass compared to monkeys and lesser apes that sleep upright. One can further hypothesize that brain size varies in anthropoids according to the degree of exposure of the fetus to postural verticality. The supporting evidence for this postulation includes a finding that in fossil hominins cerebral blood flow rate increased faster than brain volume. This testable hypothesis opens a perspective for research on fetal postural cerebral hemodynamics.
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Martinón-Torres M, Garate D, Herries AIR, Petraglia MD. No scientific evidence that Homo naledi buried their dead and produced rock art. J Hum Evol 2023:103464. [PMID: 37953122 DOI: 10.1016/j.jhevol.2023.103464] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2023] [Revised: 10/16/2023] [Accepted: 10/16/2023] [Indexed: 11/14/2023]
Affiliation(s)
- María Martinón-Torres
- CENIEH (National Research Center on Human Evolution), Paseo Sierra de Atapuerca 3, 09002 Burgos, Spain; Anthropology Department, University College London, 14 Taviton street, London WC1H 0BW, UK.
| | - Diego Garate
- IIIPC (Instituto Internacional de Investigaciones Prehistóricas de Cantabria), Universidad de Cantabria, Avenida de los Castros 52, 39005 Santander, Spain
| | - Andy I R Herries
- Palaeo-Research Institute, University of Johannesburg, House 10, Bunting Road Campus, Auckland Park, Gauteng 2092, South Africa; Palaeoscience, Dept. of Archaeology and History, La Trobe University, Melbourne Campus, Corner of Plenty Road and Kingsbury Drive, Bundoora, 3086 VIC, Australia
| | - Michael D Petraglia
- Human Origins Program, Smithsonian Institution, Washington, D.C., 20560, USA; School of Social Science, University of Queensland, St Lucia, Brisbane, Australia; Australian Research Centre for Human Evolution, Griffith University, Nathan, 4111, Brisbane, Australia
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6
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Knorr D, Sevenich R. Processed foods: From their emergence to resilient technologies. Compr Rev Food Sci Food Saf 2023; 22:3765-3789. [PMID: 37421325 DOI: 10.1111/1541-4337.13205] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2023] [Revised: 05/23/2023] [Accepted: 06/11/2023] [Indexed: 07/10/2023]
Abstract
Humans need food processing assuring food safety, quality, and functionality to sustain their life. The ongoing debates regarding food processing require rational and scientific data about food processing and processed foods. This study deals with the importance, origins, and history of processing, defining processes and discussing existing food classification systems and provides recommendations for future food process development. Descriptions and comparisons of technologies for food preservation, their resource efficiency, and beneficial aspects in relation to traditional processing are summarized. Possibilities for pretreatments or combination application and related potentials are provided. A consumer-oriented paradigm change is presented using the potential of resilient technologies for food product improvements rather than the traditional adaptation of raw materials to existing processes. Means for food science and technology research toward dietary changes by transparent, gentle, and resource-efficient processes for consumers food preference, acceptance, and needs are provided.
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Affiliation(s)
- Dietrich Knorr
- Department of Food Biotechnology and Food Process Engineering, Technische Universität Berlin (TU Berlin), Berlin, Germany
| | - Robert Sevenich
- Department of Food Biotechnology and Food Process Engineering, Technische Universität Berlin (TU Berlin), Berlin, Germany
- Leibniz Institute for Agricultural Engineering and Bioeconomy (ATB), Potsdam, Germany
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Vanhoof MJM, Croquet B, De Groote I, Vereecke EE. Principal component and linear discriminant analyses for the classification of hominoid primate specimens based on bone shape data. ROYAL SOCIETY OPEN SCIENCE 2023; 10:230950. [PMID: 37736524 PMCID: PMC10509576 DOI: 10.1098/rsos.230950] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/03/2023] [Accepted: 09/01/2023] [Indexed: 09/23/2023]
Abstract
In this study, we tested the hypothesis that machine learning methods can accurately classify extant primates based on triquetrum shape data. We then used this classification tool to observe the affinities between extant primates and fossil hominoids. We assessed the discrimination accuracy for an unsupervised and supervised learning pipeline, i.e. with principal component analysis (PCA) and linear discriminant analysis (LDA) feature extraction, when tasked with the classification of extant primates. The trained algorithm is used to classify a sample of known fossil hominoids. For the visualization, PCA and uniform manifold approximation and projection (UMAP) are used. The results show that the discriminant function correctly classified the extant specimens with an F1-score of 0.90 for both PCA and LDA. In addition, the classification of fossil hominoids reflects taxonomy and locomotor behaviour reported in literature. This classification based on shape data using PCA and LDA is a powerful tool that can discriminate between the triquetrum shape of extant primates with high accuracy and quantitatively compare fossil and extant morphology. It can be used to support taxonomic differentiation and aid the further interpretation of fossil remains. Further testing is necessary by including other bones and more species and specimens per species extinct primates.
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Affiliation(s)
- Marie J. M. Vanhoof
- Department of Development & Regeneration, Biomedical Sciences Group, KU Leuven Campus Kulak, Kortrijk, Belgium
| | - Balder Croquet
- Medical Imaging Research Center, UZ Leuven, Leuven, Belgium
- Department of Electrical Engineering, ESAT/PSI, KU Leuven, Leuven, Belgium
| | - Isabelle De Groote
- Department of Archaeology, Ghent University, Ghent, Belgium
- Research Centre in Evolutionary Anthropology and Paleoecology, Liverpool John Moores University, Liverpool L3 3AF, UK
| | - Evie E. Vereecke
- Department of Development & Regeneration, Biomedical Sciences Group, KU Leuven Campus Kulak, Kortrijk, Belgium
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8
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Delezene LK, Skinner MM, Bailey SE, Brophy JK, Elliott MC, Gurtov A, Irish JD, Moggi-Cecchi J, de Ruiter DJ, Hawks J, Berger LR. Descriptive catalog of Homo naledi dental remains from the 2013 to 2015 excavations of the Dinaledi Chamber, site U.W. 101, within the Rising Star cave system, South Africa. J Hum Evol 2023; 180:103372. [PMID: 37229947 DOI: 10.1016/j.jhevol.2023.103372] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2021] [Revised: 03/31/2023] [Accepted: 03/31/2023] [Indexed: 05/27/2023]
Abstract
More than 150 hominin teeth, dated to ∼330-241 thousand years ago, were recovered during the 2013-2015 excavations of the Dinaledi Chamber of the Rising Star cave system, South Africa. These fossils comprise the first large single-site sample of hominin teeth from the Middle Pleistocene of Africa. Though scattered remains attributable to Homo sapiens, or their possible lineal ancestors, are known from older and younger sites across the continent, the distinctive morphological feature set of the Dinaledi teeth supports the recognition of a novel hominin species, Homo naledi. This material provides evidence of African Homo lineage diversity that lasts until at least the Middle Pleistocene. Here, a catalog, anatomical descriptions, and details of preservation and taphonomic alteration are provided for the Dinaledi teeth. Where possible, provisional associations among teeth are also proposed. To facilitate future research, we also provide access to a catalog of surface files of the Rising Star jaws and teeth.
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Affiliation(s)
- Lucas K Delezene
- Department of Anthropology, University of Arkansas, Fayetteville, AR 72701, USA; Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Private Bag 3, WITS 2050, South Africa.
| | - Matthew M Skinner
- Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Private Bag 3, WITS 2050, South Africa; School of Anthropology and Conservation, University of Kent, Marlowe Building, Canterbury CT2 7NR, UK; Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, 04103 Leipzig, Germany
| | - Shara E Bailey
- Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, 04103 Leipzig, Germany; Department of Anthropology, Center for the Study of Human Origins, New York University, New York, NY 10003, USA
| | - Juliet K Brophy
- Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Private Bag 3, WITS 2050, South Africa; Department of Geography and Anthropology, Louisiana State University, Baton Rouge, LA 70803, USA
| | - Marina C Elliott
- Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Private Bag 3, WITS 2050, South Africa; Department of Archaeology, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, USA
| | - Alia Gurtov
- Stripe, Inc., 199 Water Street, 30th Floor, New York, NY 10038, USA
| | - Joel D Irish
- Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Private Bag 3, WITS 2050, South Africa; School of Biological and Environmental Sciences, Liverpool John Moores University, Liverpool L3 3AF, UK
| | - Jacopo Moggi-Cecchi
- Laboratory of Anthropology, Department of Biology, University of Florence, Via del Proconsolo 12, Firenze 50122, Italy
| | - Darryl J de Ruiter
- Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Private Bag 3, WITS 2050, South Africa; Department of Anthropology, Texas A&M University, College Station, TX 77843, USA
| | - John Hawks
- Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Private Bag 3, WITS 2050, South Africa; Department of Anthropology, University of Wisconsin-Madison, Madison, WI 53706, USA
| | - Lee R Berger
- National Geographic Society, 1145 17th Street NW, Washington, DC 20036, USA; Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Private Bag 3, WITS 2050, South Africa
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Scerri EML, Will M. The revolution that still isn't: The origins of behavioral complexity in Homo sapiens. J Hum Evol 2023; 179:103358. [PMID: 37058868 DOI: 10.1016/j.jhevol.2023.103358] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2022] [Revised: 03/13/2023] [Accepted: 03/14/2023] [Indexed: 04/16/2023]
Abstract
The behavioral origins of Homo sapiens can be traced back to the first material culture produced by our species in Africa, the Middle Stone Age (MSA). Beyond this broad consensus, the origins, patterns, and causes of behavioral complexity in modern humans remain debated. Here, we consider whether recent findings continue to support popular scenarios of: (1) a modern human 'package,' (2) a gradual and 'pan-African' emergence of behavioral complexity, and (3) a direct connection to changes in the human brain. Our geographically structured review shows that decades of scientific research have continuously failed to find a discrete threshold for a complete 'modernity package' and that the concept is theoretically obsolete. Instead of a continent-wide, gradual accumulation of complex material culture, the record exhibits a predominantly asynchronous presence and duration of many innovations across different regions of Africa. The emerging pattern of behavioral complexity from the MSA conforms to an intricate mosaic characterized by spatially discrete, temporally variable, and historically contingent trajectories. This archaeological record bears no direct relation to a simplistic shift in the human brain but rather reflects similar cognitive capacities that are variably manifested. The interaction of multiple causal factors constitutes the most parsimonious explanation driving the variable expression of complex behaviors, with demographic processes such as population structure, size, and connectivity playing a key role. While much emphasis has been given to innovation and variability in the MSA record, long periods of stasis and a lack of cumulative developments argue further against a strictly gradualistic nature in the record. Instead, we are confronted with humanity's deep, variegated roots in Africa, and a dynamic metapopulation that took many millennia to reach the critical mass capable of producing the ratchet effect commonly used to define contemporary human culture. Finally, we note a weakening link between 'modern' human biology and behavior from around 300 ka ago.
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Affiliation(s)
- Eleanor M L Scerri
- Pan-African Evolution Research Group, Max Planck Institute for Geoanthropology, Kahlaische Str. 10, 07749, Jena, Germany; Department of Classics and Archaeology, University of Malta, Msida, MSD 2080, Malta; Department of Prehistory, University of Cologne, 50931, Cologne, Germany.
| | - Manuel Will
- Department of Early Prehistory and Quaternary Ecology, University of Tübingen, Schloss Hohentübingen, Burgsteige 11, 72070, Tübingen, Germany
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Rudolfová V, Štolhoferová I, Elmi HSA, Rádlová S, Rexová K, Berti DA, Král D, Sommer D, Landová E, Frýdlová P, Frynta D. Do Spiders Ride on the Fear of Scorpions? A Cross-Cultural Eye Tracking Study. Animals (Basel) 2022; 12:ani12243466. [PMID: 36552386 PMCID: PMC9774548 DOI: 10.3390/ani12243466] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2022] [Revised: 11/28/2022] [Accepted: 12/01/2022] [Indexed: 12/13/2022] Open
Abstract
Deep fear of spiders is common in many countries, yet its origin remains unexplained. In this study, we tested a hypothesis based on recent studies suggesting that fear of spiders might stem from a generalized fear of chelicerates or fear of scorpions. To this end, we conducted an eye tracking experiment using a spontaneous gaze preference paradigm, with spiders and scorpions (previously neglected but crucial stimuli) as threatening stimuli and grasshoppers as control stimuli. In total, 67 participants from Somaliland and 67 participants from the Czech Republic were recruited and presented with a sequence of paired images. Both Somali and Czech people looked longer (total duration of the gaze) and more often (number of fixations) on the threatening stimuli (spiders and scorpions) when presented with a control (grasshopper). When both threatening stimuli were presented together, Somali participants focused significantly more on the scorpion, whereas in Czech participants, the effect was less pronounced, and in Czech women it was not significant. This supports the hypothesis that fear of spiders originated as a generalized fear of scorpions. Moreover, the importance of spiders as fear-eliciting stimuli may be enhanced in the absence of scorpions in the environment.
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Affiliation(s)
- Veronika Rudolfová
- Department of Zoology, Faculty of Science, Charles University, Viničná 7, 128 43 Prague, Czech Republic
| | - Iveta Štolhoferová
- Department of Zoology, Faculty of Science, Charles University, Viničná 7, 128 43 Prague, Czech Republic
| | - Hassan S. A. Elmi
- Department of Zoology, Faculty of Science, Charles University, Viničná 7, 128 43 Prague, Czech Republic
- Department of Biology, Faculty of Education, Amoud University, Borama, Somaliland
| | - Silvie Rádlová
- Department of Zoology, Faculty of Science, Charles University, Viničná 7, 128 43 Prague, Czech Republic
| | - Kateřina Rexová
- Department of Zoology, Faculty of Science, Charles University, Viničná 7, 128 43 Prague, Czech Republic
| | - Daniel A. Berti
- Department of Zoology, Faculty of Science, Charles University, Viničná 7, 128 43 Prague, Czech Republic
| | - David Král
- Department of Zoology, Faculty of Science, Charles University, Viničná 7, 128 43 Prague, Czech Republic
| | - David Sommer
- Department of Zoology, Faculty of Science, Charles University, Viničná 7, 128 43 Prague, Czech Republic
| | - Eva Landová
- Department of Zoology, Faculty of Science, Charles University, Viničná 7, 128 43 Prague, Czech Republic
| | - Petra Frýdlová
- Department of Zoology, Faculty of Science, Charles University, Viničná 7, 128 43 Prague, Czech Republic
- Correspondence:
| | - Daniel Frynta
- Department of Zoology, Faculty of Science, Charles University, Viničná 7, 128 43 Prague, Czech Republic
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11
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The relative limb size of Homonaledi. J Hum Evol 2022; 170:103235. [PMID: 35994845 DOI: 10.1016/j.jhevol.2022.103235] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2021] [Revised: 07/03/2022] [Accepted: 07/03/2022] [Indexed: 11/20/2022]
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12
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Churchill SE, Keys K, Ross AH. Midfacial Morphology and Neandertal-Modern Human Interbreeding. BIOLOGY 2022; 11:1163. [PMID: 36009790 PMCID: PMC9404802 DOI: 10.3390/biology11081163] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/04/2022] [Revised: 07/29/2022] [Accepted: 08/01/2022] [Indexed: 06/15/2023]
Abstract
Ancient DNA from, Neandertal and modern human fossils, and comparative morphological analyses of them, reveal a complex history of interbreeding between these lineages and the introgression of Neandertal genes into modern human genomes. Despite substantial increases in our knowledge of these events, the timing and geographic location of hybridization events remain unclear. Six measures of facial size and shape, from regional samples of Neandertals and early modern humans, were used in a multivariate exploratory analysis to try to identify regions in which early modern human facial morphology was more similar to that of Neandertals, which might thus represent regions of greater introgression of Neandertal genes. The results of canonical variates analysis and hierarchical cluster analysis suggest important affinities in facial morphology between both Middle and Upper Paleolithic early modern humans of the Near East with Neandertals, highlighting the importance of this region for interbreeding between the two lineages.
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Affiliation(s)
- Steven E. Churchill
- Department of Evolutionary Anthropology, Duke University, Durham, NC 27708, USA;
- Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, Johannesburg 2050, South Africa
| | - Kamryn Keys
- Human Identification & Forensic Analysis Laboratory, Department of Biological Sciences, North Carolina State University, Raleigh, NC 27695, USA;
| | - Ann H. Ross
- Human Identification & Forensic Analysis Laboratory, Department of Biological Sciences, North Carolina State University, Raleigh, NC 27695, USA;
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Meneganzin A, Pievani T, Manzi G. Pan-Africanism vs. single-origin of Homo sapiens: Putting the debate in the light of evolutionary biology. Evol Anthropol 2022; 31:199-212. [PMID: 35848454 PMCID: PMC9540121 DOI: 10.1002/evan.21955] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2021] [Revised: 02/23/2022] [Accepted: 06/14/2022] [Indexed: 12/03/2022]
Abstract
The scenario of Homo sapiens origin/s within Africa has become increasingly complex, with a pan-African perspective currently challenging the long-established single-origin hypothesis. In this paper, we review the lines of evidence employed in support of each model, highlighting inferential limitations and possible terminological misunderstandings. We argue that the metapopulation scenario envisaged by pan-African proponents well describes a mosaic diversification among late Middle Pleistocene groups. However, this does not rule out a major contribution that emerged from a single population where crucial derived features-notably, a globular braincase-appeared as the result of a punctuated, cladogenetic event. Thus, we suggest that a synthesis is possible and propose a scenario that, in our view, better reconciles with consolidated expectations in evolutionary theory. These indicate cladogenesis in allopatry as an ordinary pattern for the origin of a new species, particularly during phases of marked climatic and environmental instability.
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Affiliation(s)
| | | | - Giorgio Manzi
- Department of Environmental BiologySapienza University of RomeRomeItaly
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14
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Baab KL, Rogers M, Bruner E, Semaw S. Reconstruction and analysis of the DAN5/P1 and BSN12/P1 Gona Early Pleistocene Homo fossils. J Hum Evol 2021; 162:103102. [PMID: 34891069 DOI: 10.1016/j.jhevol.2021.103102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2021] [Revised: 10/18/2021] [Accepted: 10/18/2021] [Indexed: 11/18/2022]
Abstract
Two Early Pleistocene fossils from Gona, Ethiopia, were originally assigned to Homo erectus, and their differences in size and robusticity were attributed to either sexual dimorphism or anagenetic evolution. In the current study, we both revisit the taxonomic affinities of these fossils and assess whether morphological differences between them reflect temporal evolution or sexual variation. We generated virtual reconstructions of the mostly complete ∼1.55 Ma DAN5/P1 calvaria and the less complete 1.26 Ma BSN12/P1 fossil, allowing us to directly compare their anterior vault shapes using landmark-based shape analysis. The two fossils are similar in calvaria shape to H. erectus and also to other Early Pleistocene Homo species based on a geometric morphometric analysis of calvaria landmarks and semilandmarks. The DAN5/P1 fossil bears a particularly close affinity to the Georgian H. erectus fossils and to KNM-ER 1813 (H. habilis), probably reflecting allometric influences on vault shape. Combined with species-specific traits of the neurocranium (e.g., midline keeling, angular torus), we confirm that these fossils are likely early African H. erectus. We calculated regression-based estimates of endocranial volume for BSN12/P1 of 882-910 cm3 based on three virtual reconstructions. Although BSN12/P1 is markedly larger than DAN5/P1 (598 cm3), both fossils represent the smallest adult H. erectus known from their respective time periods in Africa. Some of the difference in endocranial volume between the two Gona fossils reflects broader species-level brain expansion from 1.77 to 0.01 Ma, confirmed here using a large sample (n = 38) of H. erectus. However, shape differences between these fossils did not reflect species-level changes to calvaria shape. Moreover, the analysis failed to recover a clear pattern of sexually patterned size or shape differences within H. erectus based on our current assessments of sex for individual fossils.
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Affiliation(s)
- Karen L Baab
- Department of Anatomy, Midwestern University, 19555 N. 59th Ave., Glendale, AZ 85012, USA.
| | - Michael Rogers
- Department of Anthropology, Southern Connecticut State University, 501 Crescent St., New Haven, CT 06515, USA
| | - Emiliano Bruner
- Centro Nacional de Investigación sobre la Evolución Humana (CENIEH), Sierra de Atapuerca 3, Burgos, 09002, Spain
| | - Sileshi Semaw
- Centro Nacional de Investigación sobre la Evolución Humana (CENIEH), Sierra de Atapuerca 3, Burgos, 09002, Spain; Stone Age Institute and CRAFT Research Center, 1392 W. Dittemore Rd. Gosport, IN 47408, USA
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15
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Bowland LA, Scott JE, Kivell TL, Patel BA, Tocheri MW, Orr CM. Homo naledi pollical metacarpal shaft morphology is distinctive and intermediate between that of australopiths and other members of the genus Homo. J Hum Evol 2021; 158:103048. [PMID: 34340120 DOI: 10.1016/j.jhevol.2021.103048] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2020] [Revised: 06/25/2021] [Accepted: 06/26/2021] [Indexed: 10/20/2022]
Abstract
Homo naledi fossils from the Rising Star cave system provide important insights into the diversity of hand morphology within the genus Homo. Notably, the pollical (thumb) metacarpal (Mc1) displays an unusual suite of characteristics including a median longitudinal crest, a narrow proximal base, and broad flaring intrinsic muscle flanges. The present study evaluates the affinities of H. naledi Mc1 morphology via 3D geometric morphometric analysis of shaft shape using a broader comparative sample (n = 337) of fossil hominins, recent humans, apes, and cercopithecoid monkeys than in prior work. Results confirm that the H. naledi Mc1 is distinctive from most other hominins in being narrow at the proximal end but surmounted by flaring muscle flanges distally. Only StW 418 (Australopithecus cf. africanus) is similar in these aspects of shape. The gracile proximal shaft is most similar to cercopithecoids, Pan, Pongo, Australopithecus afarensis, and Australopithecus sediba, suggesting that H. naledi retains the condition primitive for the genus Homo. In contrast, Neandertal Mc1s are characterized by wide proximal bases and shafts, pinched midshafts, and broad distal flanges, while those of recent humans generally have straight shafts, less robust muscle flanges, and wide proximal shafts/bases. Although uncertainties remain regarding character polarity, the morphology of the H. naledi thumb might be interpreted as a retained intermediate state in a transformation series between the overall gracility of the shaft and the robust shafts of later hominins. Such a model suggests that the addition of broad medial and lateral muscle flanges to a primitively slender shaft was the first modification in transforming the Mc1 into the overall more robust structure exhibited by other Homo taxa including Neandertals and recent Homo sapiens in whose shared lineage the bases and proximal shafts became expanded, possibly as an adaptation to the repeated recruitment of powerful intrinsic pollical muscles.
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Affiliation(s)
- Lucyna A Bowland
- Department of Anthropology, University of Arkansas, Fayetteville, AR, 72701, USA
| | - Jill E Scott
- Department of Sociology and Anthropology, Metropolitan State University of Denver, Denver, CO, 80217, USA; Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, WITS 2050, Johannesburg, South Africa
| | - Tracy L Kivell
- Centre for the Exploration of the Deep Human Journey, University of the Witwatersrand, WITS 2050, Johannesburg, South Africa; School of Anthropology and Conservation, University of Kent, Canterbury, CT2 7NR, UK; Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, Leipzig, 04103, Germany
| | - Biren A Patel
- Department of Integrative Anatomical Sciences, Keck School of Medicine, University of Southern California, Los Angeles, CA, 90033, USA; Human and Evolutionary Biology Section, Department of Biological Sciences, University of Southern California, Los Angeles, CA, 90089, USA
| | - Matthew W Tocheri
- Department of Anthropology, Lakehead University, Thunder Bay, ON, P7K 1L8, Canada; Human Origins Program, Department of Anthropology, National Museum of Natural History, Smithsonian Institution, Washington DC, 20560, USA; Australian Research Council Centre of Excellence for Australian Biodiversity and Heritage, University of Wollongong, Wollongong, New South Wales, 2522, Australia
| | - Caley M Orr
- Department of Cell and Developmental Biology, University of Colorado School of Medicine, Aurora, CO, 80045, USA; Department of Anthropology, University of Colorado Denver, Denver, CO, 80217, USA.
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16
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Wang S, Ge S, Colijn C, Biller P, Wang L, Elliott LT. Estimating Genetic Similarity Matrices Using Phylogenies. J Comput Biol 2021; 28:587-600. [PMID: 33926225 PMCID: PMC8219189 DOI: 10.1089/cmb.2020.0375] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Genetic similarity is a measure of the genetic relatedness among individuals. The standard method for computing these matrices involves the inner product of observed genetic variants. Such an approach is inaccurate or impossible if genotypes are not available, or not densely sampled, or of poor quality (e.g., genetic analysis of extinct species). We provide a new method for computing genetic similarities among individuals using phylogenetic trees. Our method can supplement (or stand in for) computations based on genotypes. We provide simulations suggesting that the genetic similarity matrices computed from trees are consistent with those computed from genotypes. With our methods, quantitative analysis on genetic traits and analysis of heritability and coheritability can be conducted directly using genetic similarity matrices and so in the absence of genotype data, or under uncertainty in the phylogenetic tree. We use simulation studies to demonstrate the advantages of our method, and we provide applications to data.
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Affiliation(s)
- Shijia Wang
- School of Statistics and Data Science, LPMC and KLMDASR, Nankai University, Tianjin, China
| | - Shufei Ge
- Institute of Mathematical Sciences, ShanghaiTech University, Shanghai, China
| | - Caroline Colijn
- Department of Mathematics, Simon Fraser University, Burnaby, Canada
| | - Priscila Biller
- Department of Mathematics, Simon Fraser University, Burnaby, Canada
| | - Liangliang Wang
- Department of Statistics and Actuarial Science, Simon Fraser University, Burnaby, Canada
| | - Lloyd T Elliott
- Department of Statistics and Actuarial Science, Simon Fraser University, Burnaby, Canada
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17
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Hollfelder N, Breton G, Sjödin P, Jakobsson M. The deep population history in Africa. Hum Mol Genet 2021; 30:R2-R10. [PMID: 33438014 PMCID: PMC8117439 DOI: 10.1093/hmg/ddab005] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2020] [Revised: 12/22/2020] [Accepted: 01/05/2021] [Indexed: 12/28/2022] Open
Abstract
Africa is the continent with the greatest genetic diversity among humans and the level of diversity is further enhanced by incorporating non-majority groups, which are often understudied. Many of today's minority populations historically practiced foraging lifestyles, which were the only subsistence strategies prior to the rise of agriculture and pastoralism, but only a few groups practicing these strategies remain today. Genomic investigations of Holocene human remains excavated across the African continent show that the genetic landscape was vastly different compared to today's genetic landscape and that many groups that today are population isolate inhabited larger regions in the past. It is becoming clear that there are periods of isolation among groups and geographic areas, but also genetic contact over large distances throughout human history in Africa. Genomic information from minority populations and from prehistoric remains provide an invaluable source of information on the human past, in particular deep human population history, as Holocene large-scale population movements obscure past patterns of population structure. Here we revisit questions on the nature and time of the radiation of early humans in Africa, the extent of gene-flow among human populations as well as introgression from archaic and extinct lineages on the continent.
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Affiliation(s)
- Nina Hollfelder
- Human Evolution, Department of Organismal Biology, Uppsala University, Norbyvägen 18C, 75236 Uppsala, Sweden
| | - Gwenna Breton
- Human Evolution, Department of Organismal Biology, Uppsala University, Norbyvägen 18C, 75236 Uppsala, Sweden
| | - Per Sjödin
- Human Evolution, Department of Organismal Biology, Uppsala University, Norbyvägen 18C, 75236 Uppsala, Sweden
| | - Mattias Jakobsson
- Human Evolution, Department of Organismal Biology, Uppsala University, Norbyvägen 18C, 75236 Uppsala, Sweden
- Palaeo-Research Institute, University of Johannesburg, Physical, Cnr Kingsway & University Roads, Auckland Park, Johannesburg 2092, South Africa
- SciLifeLab, Stockholm and Uppsala, Entrance C11, BMC, Husargatan 3, 752 37 Uppsala, Sweden
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18
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Caparros M, Prat S. A Phylogenetic Networks perspective on reticulate human evolution. iScience 2021; 24:102359. [PMID: 33898948 PMCID: PMC8054162 DOI: 10.1016/j.isci.2021.102359] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2019] [Revised: 05/04/2020] [Accepted: 03/23/2021] [Indexed: 01/02/2023] Open
Abstract
We present a methodological phylogenetic reconstruction approach combining Maximum Parsimony and Phylogenetic Networks methods for the study of human evolution applied to phenotypic craniodental characters of 22 hominin species. The approach consists in selecting and validating a tree-like most parsimonious scenario out of several parsimony runs based on various numerical constraints. An intermediate step from tree to network methods is implemented by running an analysis with a reduced apomorphous character dataset that generates multiple parsimonious trees. These most parsimonious trees are then used as input for a Phylogenetic Networks analysis that results in consensus and reticulate networks. We show here that the phylogenetic tree-like definition of the genus Homo is a relative concept linked to craniodental characters that come in support of hypothetical Last Common Ancestors of the most parsimonious scenario and infer that the Homo reticulate network concords with recent findings in paleogenomic research regarding its mode of evolution.
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Affiliation(s)
- Miguel Caparros
- UMR 7194 "Histoire naturelle de l'Homme préhistorique" CNRS-MNHN-UPVD, Alliance Sorbonne Université, Musée de l’Homme, Palais de Chaillot, 17 place du Trocadéro, 75116 Paris, France
| | - Sandrine Prat
- UMR 7194 "Histoire naturelle de l'Homme préhistorique" CNRS-MNHN-UPVD, Alliance Sorbonne Université, Musée de l’Homme, Palais de Chaillot, 17 place du Trocadéro, 75116 Paris, France
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19
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Divergence-time estimates for hominins provide insight into encephalization and body mass trends in human evolution. Nat Ecol Evol 2021; 5:808-819. [PMID: 33795855 DOI: 10.1038/s41559-021-01431-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2020] [Accepted: 02/25/2021] [Indexed: 12/18/2022]
Abstract
Quantifying speciation times during human evolution is fundamental as it provides a timescale to test for the correlation between key evolutionary transitions and extrinsic factors such as climatic or environmental change. Here, we applied a total evidence dating approach to a hominin phylogeny to estimate divergence times under different topological hypotheses. The time-scaled phylogenies were subsequently used to perform ancestral state reconstructions of body mass and phylogenetic encephalization quotient (PEQ). Our divergence-time estimates are consistent with other recent studies that analysed extant species. We show that the origin of the genus Homo probably occurred between 4.30 and 2.56 million years ago. The ancestral state reconstructions show a general trend towards a smaller body mass before the emergence of Homo, followed by a trend towards a greater body mass. PEQ estimations display a general trend of gradual but accelerating encephalization evolution. The obtained results provide a rigorous temporal framework for human evolution.
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20
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Árnason Ú, Hallström B. The reversal of human phylogeny: Homo left Africa as erectus, came back as sapiens sapiens. Hereditas 2020; 157:51. [PMID: 33341120 PMCID: PMC7749984 DOI: 10.1186/s41065-020-00163-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Accepted: 11/27/2020] [Indexed: 11/25/2022] Open
Abstract
Background The molecular out of Africa hypothesis, OOAH, has been considered as an established fact amid population geneticists for some 25–30 years despite the early concern with it among phylogeneticists with experience beyond that of Homo. The palaeontological support for the hypothesis is also questionable, a circumstance that in the light of expanding Eurasian palaeontological knowledge has become accentuated through the last decades. Results The direction of evolution in the phylogenetic tree of modern humans (Homo sapiens sapiens, Hss) was established inter alia by applying progressive phylogenetic analysis to an mtDNA sampling that included a Eurasian, Lund, and the African Mbuti, San and Yoruba. The examination identified the African populations as paraphyletic, thereby compromising the OOAH. The finding, which was consistent with the out of Eurasia hypothesis, OOEH, was corroborated by the mtDNA introgression from Hss into Hsnn (Neanderthals) that demonstrated the temporal and physical Eurasian coexistence of the two lineages. The results are consistent with the palaeontologically established presence of H. erectus in Eurasia, a Eurasian divergence between H. sapiens and H. antecessor ≈ 850,000 YBP, an Hs divergence between Hss and Hsn (Neanderthals + Denisovans) ≈ 800,000 YBP, an mtDNA introgression from Hss into Hsnn* ≈ 500,000 YBP and an Eurasian divergence among the ancestors of extant Hss ≈ 250,000 YBP at the exodus of Mbuti/San into Africa. Conclusions The present study showed that Eurasia was not the receiver but the donor in Hss evolution. The findings that Homo left Africa as erectus and returned as sapiens sapiens constitute a change in the understanding of Hs evolution to one that conforms to the extensive Eurasian record of Hs palaeontology and archaeology.
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Affiliation(s)
- Úlfur Árnason
- Department of Brain Surgery, Faculty of Medicine, University of Lund, Lund, Sweden.
| | - Björn Hallström
- Center for Translational Genomics, Faculty of Medicine, University of Lund, Lund, Sweden
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21
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Distinct mandibular premolar crown morphology in Homo naledi and its implications for the evolution of Homo species in southern Africa. Sci Rep 2020; 10:13196. [PMID: 32764597 PMCID: PMC7413389 DOI: 10.1038/s41598-020-69993-x] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2020] [Accepted: 07/22/2020] [Indexed: 01/13/2023] Open
Abstract
Homo naledi displays a combination of features across the skeleton not found in any other hominin taxon, which has hindered attempts to determine its placement within the hominin clade. Using geometric morphometrics, we assess the morphology of the mandibular premolars of the species at the enamel-dentine junction (EDJ). Comparing with specimens of Paranthropus, Australopithecus and Homo (n = 97), we find that the H. naledi premolars from the Dinaledi chamber consistently display a suite of traits (e.g., tall crown, well-developed P3 and P4 metaconid, strongly developed P3 mesial marginal ridge, and a P3 > P4 size relationship) that distinguish them from known hominin groups. Premolars from a second locality, the Lesedi Chamber, are consistent with this morphology. We also find that two specimens from South Africa, SK 96 (usually attributed to Paranthropus) and Stw 80 (Homo sp.), show similarities to the species, and we discuss a potential evolutionary link between H. naledi and hominins from Sterkfontein and Swartkrans.
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22
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Allen R, Ryan H, Davis BW, King C, Frantz L, Irving-Pease E, Barnett R, Linderholm A, Loog L, Haile J, Lebrasseur O, White M, Kitchener AC, Murphy WJ, Larson G. A mitochondrial genetic divergence proxy predicts the reproductive compatibility of mammalian hybrids. Proc Biol Sci 2020; 287:20200690. [PMID: 32486979 PMCID: PMC7341909 DOI: 10.1098/rspb.2020.0690] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2020] [Accepted: 05/06/2020] [Indexed: 12/14/2022] Open
Abstract
Numerous pairs of evolutionarily divergent mammalian species have been shown to produce hybrid offspring. In some cases, F1 hybrids are able to produce F2s through matings with F1s. In other instances, the hybrids are only able to produce offspring themselves through backcrosses with a parent species owing to unisexual sterility (Haldane's Rule). Here, we explicitly tested whether genetic distance, computed from mitochondrial and nuclear genes, can be used as a proxy to predict the relative fertility of the hybrid offspring resulting from matings between species of terrestrial mammals. We assessed the proxy's predictive power using a well-characterized felid hybrid system, and applied it to modern and ancient hominins. Our results revealed a small overlap in mitochondrial genetic distance values that distinguish species pairs whose calculated distances fall within two categories: those whose hybrid offspring follow Haldane's Rule, and those whose hybrid F1 offspring can produce F2s. The strong correlation between genetic distance and hybrid fertility demonstrated here suggests that this proxy can be employed to predict whether the hybrid offspring of two mammalian species will follow Haldane's Rule.
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Affiliation(s)
- Richard Allen
- Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and the History of Art, University of Oxford, Oxford OX1 3QY, UK
| | - Hannah Ryan
- Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and the History of Art, University of Oxford, Oxford OX1 3QY, UK
| | - Brian W. Davis
- Veterinary Integrative Biosciences, Texas A&M University, College Station, TX 77843, USA
| | - Charlotte King
- Department of Archaeology, Durham University, Science Site, Durham DH1 3LE, UK
- Department of Anatomy, University of Otago, Great King Street, Dunedin 9016, New Zealand
| | - Laurent Frantz
- Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and the History of Art, University of Oxford, Oxford OX1 3QY, UK
- School of Biological and Chemical Sciences, Queen Mary University of London, Mile End Road, London E1 4NS, UK
| | - Evan Irving-Pease
- Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and the History of Art, University of Oxford, Oxford OX1 3QY, UK
- Lundbeck GeoGenetics Centre, The Globe Institute, University of Copenhagen, 1350 Copenhagen, Denmark
| | - Ross Barnett
- Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and the History of Art, University of Oxford, Oxford OX1 3QY, UK
| | - Anna Linderholm
- Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and the History of Art, University of Oxford, Oxford OX1 3QY, UK
- Department of Anthropology, Texas A&M University, College Station, TX 77843-4352, USA
| | - Liisa Loog
- Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and the History of Art, University of Oxford, Oxford OX1 3QY, UK
- Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK
| | - James Haile
- Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and the History of Art, University of Oxford, Oxford OX1 3QY, UK
| | - Ophélie Lebrasseur
- Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and the History of Art, University of Oxford, Oxford OX1 3QY, UK
- Department of Archaeology, Classics and Egyptology, University of Liverpool, 12-14 Abercromby Square, Liverpool L69 7WZ, UK
| | - Mark White
- Department of Archaeology, Durham University, Science Site, Durham DH1 3LE, UK
| | - Andrew C. Kitchener
- Department of Natural Sciences, National Museums Scotland, Chambers Street, Edinburgh EH1 IJF, UK
- Institute of Geography, School of Geosciences, University of Edinburgh, Drummond Street, Edinburgh EH9 3PX, UK
| | - William J. Murphy
- Veterinary Integrative Biosciences, Texas A&M University, College Station, TX 77843, USA
| | - Greger Larson
- Palaeogenomics and Bio-Archaeology Research Network, Research Laboratory for Archaeology and the History of Art, University of Oxford, Oxford OX1 3QY, UK
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23
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Joannes-Boyau R, Pelizzon A, Page J, Rice N, Scheffers A. Owning humankind: fossils, humans and archaeological remains. Heliyon 2020; 6:e04129. [PMID: 32551382 PMCID: PMC7287245 DOI: 10.1016/j.heliyon.2020.e04129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2019] [Revised: 02/02/2020] [Accepted: 06/01/2020] [Indexed: 11/23/2022] Open
Abstract
There are a myriad of laws, guidelines and unwritten agreements relating to human, hominid and hominin remains. Legal gaps and inadequate definitions of what constitutes a fossil have meant that a 'finders keepers' approach is often applied to the ownership and control of our ancestors' remains. Such shortcomings expose numerous legal and ethical conundrums. Should any one organisation, individual or government control access to recently-found remains, limiting opportunities to unlock the secrets of evolution? Given that humans can start fossilisation processes immediately after burial, at what point does it become appropriate to dig up their remains? And who should control access to them? Could any prehistoric Homo ever have imagined they would one day be exhumed and their remains laid out in cases as the centrepiece of a museum exhibit? This paper surveys a number of implications that arise from these foundational questions, and ultimately challenges the belief that human, hominin and hominid remains are self-evident 'objects' capable of clear ownership: rather they constitute creative cultural intersections, which are deserving of greater ethical consideration. Protocols for respecting, protecting and conserving remains while allowing a greater equity in access to information about our common ancestors are both desirable and urgently required.
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Affiliation(s)
- Renaud Joannes-Boyau
- Geoarchaeology and Archaeometry Research Group (GARG), Southern Cross GeoScience, Southern Cross University, Military Rd, Lismore, 2480, NSW, Australia
- Palaeo-Research Institute, University of Johannesburg, Gauteng Province, South Africa
| | - Alessandro Pelizzon
- School of Law and Justice, Southern Cross University, Military Rd, Lismore, 2480, NSW, Australia
| | - John Page
- School of Law and Justice, Southern Cross University, Military Rd, Lismore, 2480, NSW, Australia
| | - Nicole Rice
- Office of Deputy Vice Chancellor (Research), Southern Cross University, Military Rd, Lismore, 2480, NSW, Australia
| | - Anja Scheffers
- Geoarchaeology and Archaeometry Research Group (GARG), Southern Cross GeoScience, Southern Cross University, Military Rd, Lismore, 2480, NSW, Australia
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24
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Bolter DR, Elliott MC, Hawks J, Berger LR. Immature remains and the first partial skeleton of a juvenile Homo naledi, a late Middle Pleistocene hominin from South Africa. PLoS One 2020; 15:e0230440. [PMID: 32236122 PMCID: PMC7112188 DOI: 10.1371/journal.pone.0230440] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2019] [Accepted: 02/29/2020] [Indexed: 11/18/2022] Open
Abstract
Immature remains are critical for understanding maturational processes in hominin species as well as for interpreting changes in ontogenetic development in hominin evolution. The study of these subjects is hindered by the fact that associated juvenile remains are extremely rare in the hominin fossil record. Here we describe an assemblage of immature remains of Homo naledi recovered from the 2013–2014 excavation season. From this assemblage, we attribute 16 postcranial elements and a partial mandible with some dentition to a single juvenile Homo naledi individual. The find includes postcranial elements never before discovered as immature elements in the sub-equatorial early hominin fossil record, and contributes new data to the field of hominin ontogeny.
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Affiliation(s)
- Debra R. Bolter
- Evolutionary Studies Institute and Centre for Excellence in PalaeoSciences, University of the Witwatersrand, Johannesburg, South Africa
- Department of Anthropology, Modesto Junior College, Modesto, California, United States of America
- * E-mail:
| | - Marina C. Elliott
- Evolutionary Studies Institute and Centre for Excellence in PalaeoSciences, University of the Witwatersrand, Johannesburg, South Africa
| | - John Hawks
- Evolutionary Studies Institute and Centre for Excellence in PalaeoSciences, University of the Witwatersrand, Johannesburg, South Africa
- Department of Anthropology, University of Wisconsin-Madison, Madison, Wisconsin, United States of America
| | - Lee R. Berger
- Evolutionary Studies Institute and Centre for Excellence in PalaeoSciences, University of the Witwatersrand, Johannesburg, South Africa
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25
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Grün R, Pike A, McDermott F, Eggins S, Mortimer G, Aubert M, Kinsley L, Joannes-Boyau R, Rumsey M, Denys C, Brink J, Clark T, Stringer C. Dating the skull from Broken Hill, Zambia, and its position in human evolution. Nature 2020; 580:372-375. [PMID: 32296179 DOI: 10.1038/s41586-020-2165-4] [Citation(s) in RCA: 34] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2019] [Accepted: 01/30/2020] [Indexed: 01/15/2023]
Abstract
The cranium from Broken Hill (Kabwe) was recovered from cave deposits in 1921, during metal ore mining in what is now Zambia1. It is one of the best-preserved skulls of a fossil hominin, and was initially designated as the type specimen of Homo rhodesiensis, but recently it has often been included in the taxon Homo heidelbergensis2-4. However, the original site has since been completely quarried away, and-although the cranium is often estimated to be around 500 thousand years old5-7-its unsystematic recovery impedes its accurate dating and placement in human evolution. Here we carried out analyses directly on the skull and found a best age estimate of 299 ± 25 thousand years (mean ± 2σ). The result suggests that later Middle Pleistocene Africa contained multiple contemporaneous hominin lineages (that is, Homo sapiens8,9, H. heidelbergensis/H. rhodesiensis and Homo naledi10,11), similar to Eurasia, where Homo neanderthalensis, the Denisovans, Homo floresiensis, Homo luzonensis and perhaps also Homo heidelbergensis and Homo erectus12 were found contemporaneously. The age estimate also raises further questions about the mode of evolution of H. sapiens in Africa and whether H. heidelbergensis/H. rhodesiensis was a direct ancestor of our species13,14.
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Affiliation(s)
- Rainer Grün
- Australian Research Centre for Human Evolution, Griffith University, Nathan, Queensland, Australia. .,Research School of Earth Sciences, The Australian National University, Canberra, Australian Capital Territory, Australia.
| | - Alistair Pike
- Faculty of Humanities, University of Southampton, Southampton, UK
| | - Frank McDermott
- UCD School of Earth Sciences, University College Dublin,, Dublin, Ireland
| | - Stephen Eggins
- Research School of Earth Sciences, The Australian National University, Canberra, Australian Capital Territory, Australia
| | - Graham Mortimer
- Research School of Earth Sciences, The Australian National University, Canberra, Australian Capital Territory, Australia
| | - Maxime Aubert
- Research School of Earth Sciences, The Australian National University, Canberra, Australian Capital Territory, Australia.,Australian Research Centre for Human Evolution & Griffith Centre for Social and Cultural Research, Griffith University, Gold Coast, Queensland, Australia
| | - Lesley Kinsley
- Research School of Earth Sciences, The Australian National University, Canberra, Australian Capital Territory, Australia
| | - Renaud Joannes-Boyau
- Research School of Earth Sciences, The Australian National University, Canberra, Australian Capital Territory, Australia.,Geoscience, Southern Cross University, Lismore, New South Wales, Australia
| | - Michael Rumsey
- Department of Earth Sciences, Natural History Museum, London, UK
| | - Christiane Denys
- Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS, Sorbonne Université, EPHE, Université des Antilles, Paris, France
| | - James Brink
- Florisbad Quaternary Research, National Museum, Bloemfontein, South Africa.,Centre for Environmental Management, University of the Free State, Bloemfontein, South Africa
| | - Tara Clark
- Australian Research Centre for Human Evolution, Griffith University, Nathan, Queensland, Australia.,School of Earth and Environmental Sciences, University of Queensland, St Lucia, Queensland, Australia.,School of Earth, Atmospheric & Life Sciences, University of Wollongong, Wollongong, New South Wales, Australia
| | - Chris Stringer
- CHER, Department of Earth Sciences, Natural History Museum, London, UK.
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26
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Davies TW, Delezene LK, Gunz P, Hublin JJ, Skinner MM. Endostructural morphology in hominoid mandibular third premolars: Discrete traits at the enamel-dentine junction. J Hum Evol 2019; 136:102670. [DOI: 10.1016/j.jhevol.2019.102670] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2019] [Revised: 09/06/2019] [Accepted: 09/06/2019] [Indexed: 12/20/2022]
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27
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Davies TW, Delezene LK, Gunz P, Hublin JJ, Skinner MM. Endostructural morphology in hominoid mandibular third premolars: Geometric morphometric analysis of dentine crown shape. J Hum Evol 2019; 133:198-213. [PMID: 31358180 DOI: 10.1016/j.jhevol.2019.06.004] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2018] [Revised: 06/19/2019] [Accepted: 06/19/2019] [Indexed: 01/17/2023]
Abstract
In apes, the mandibular third premolar (P3) is adapted for a role in honing the large upper canine. The role of honing was lost early in hominin evolution, releasing the tooth from this functional constraint and allowing it to respond to subsequent changes in masticatory demands. This led to substantial morphological changes, and as such the P3 has featured prominently in systematic analyses of the hominin clade. The application of microtomography has also demonstrated that examination of the enamel-dentine junction (EDJ) increases the taxonomic value of variations in crown morphology. Here we use geometric morphometric techniques to analyze the shape of the P3 EDJ in a broad sample of fossil hominins, modern humans, and extant apes (n = 111). We test the utility of P3 EDJ shape for distinguishing among hominoids, address the affinities of a number of hominin specimens of uncertain taxonomic attribution, and characterize the changes in P3 EDJ morphology across our sample, with particular reference to features relating to canine honing and premolar 'molarization'. We find that the morphology of the P3 EDJ is useful in taxonomic identification of individual specimens, with a classification accuracy of up to 88%. The P3 EDJ of canine-honing apes displays a tall protoconid, little metaconid development, and an asymmetrical crown shape. Plio-Pleistocene hominin taxa display derived masticatory adaptations at the EDJ, such as the molarized premolars of Australopithecus africanus and Paranthropus, which have well-developed marginal ridges, an enlarged talonid, and a large metaconid. Modern humans and Neanderthals display a tall dentine body and reduced metaconid development, a morphology shared with premolars from Mauer and the Cave of Hearths. Homo naledi displays a P3 EDJ morphology that is unique among our sample; it is quite unlike Middle Pleistocene and recent Homo samples and most closely resembles Australopithecus, Paranthropus and early Homo specimens.
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Affiliation(s)
- Thomas W Davies
- School of Anthropology and Conservation, University of Kent, Canterbury, CT2 7NZ, UK; Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, 04103 Leipzig, Germany.
| | - Lucas K Delezene
- Department of Anthropology, University of Arkansas, Fayetteville, AR, 72701, USA
| | - Philipp Gunz
- Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, 04103 Leipzig, Germany
| | - Jean-Jacques Hublin
- Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, 04103 Leipzig, Germany
| | - Matthew M Skinner
- School of Anthropology and Conservation, University of Kent, Canterbury, CT2 7NZ, UK; Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, 04103 Leipzig, Germany
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28
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Friedl L, Claxton AG, Walker CS, Churchill SE, Holliday TW, Hawks J, Berger LR, DeSilva JM, Marchi D. Femoral neck and shaft structure in Homo naledi from the Dinaledi Chamber (Rising Star System, South Africa). J Hum Evol 2019; 133:61-77. [PMID: 31358184 DOI: 10.1016/j.jhevol.2019.06.002] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2018] [Revised: 06/04/2019] [Accepted: 06/05/2019] [Indexed: 01/27/2023]
Abstract
The abundant femoral assemblage of Homo naledi found in the Dinaledi Chamber provides a unique opportunity to test hypotheses regarding the taxonomy, locomotion, and loading patterns of this species. Here we describe neck and shaft cross-sectional structure of all the femoral fossils recovered in the Dinaledi Chamber and compare them to a broad sample of fossil hominins, recent humans, and extant apes. Cross-sectional geometric (CSG) properties from the femoral neck (base of neck and midneck) and diaphysis (subtrochanteric region and midshaft) were obtained through CT scans for H. naledi and through CT scans or from the literature for the comparative sample. The comparison of CSG properties of H. naledi and the comparative samples shows that H. naledi femoral neck is quite derived with low superoinferior cortical thickness ratio and high relative cortical area. The neck appears superoinferiorly elongated because of two bony pilasters on its superior surface. Homo naledi femoral shaft shows a relatively thick cortex compared to the other hominins. The subtrochanteric region of the diaphysis is mediolaterally elongated resembling early hominins while the midshaft is anteroposteriorly elongated, indicating high mobility levels. In term of diaphyseal robusticity, the H. naledi femur is more gracile that other hominins and most apes. Homo naledi shows a unique combination of characteristics in its femur that undoubtedly indicate a species committed to terrestrial bipedalism but with a unique loading pattern of the femur possibly consequence of the unique postcranial anatomy of the species.
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Affiliation(s)
- Lukas Friedl
- Department of Anthropology, University of West Bohemia, Plzeň, Czech Republic
| | - Alex G Claxton
- Department of Anthropology, Dartmouth College, 409 Silsby, HB 6047, Hanover, USA
| | - Christopher S Walker
- Department of Molecular Biomedical Sciences, College of Veterinary Medicine, North Carolina State University, 1060 William Moore Drive, Raleigh, NC, 27607, USA; Evolutionary Studies Institute and Centre for Excellence in PalaeoSciences, University of the Witwatersrand, Private Bag 3, Wits, 2050, South Africa; Department of Evolutionary Anthropology, Duke University, 04 Bio Sci Bldg, Durham, NC, 27708, USA
| | - Steven E Churchill
- Department of Evolutionary Anthropology, Duke University, 04 Bio Sci Bldg, Durham, NC, 27708, USA; Evolutionary Studies Institute and Centre for Excellence in PalaeoSciences, University of the Witwatersrand, Private Bag 3, Wits, 2050, South Africa
| | - Trenton W Holliday
- Department of Anthropology, Tulane University, 417 Dinwiddie Hall, New Orleans, LA, 70118, USA; Evolutionary Studies Institute and Centre for Excellence in PalaeoSciences, University of the Witwatersrand, Private Bag 3, Wits, 2050, South Africa
| | - John Hawks
- Department of Anthropology, University of Wisconsin, 5325 Sewell Social Science Building, Madison, WI, 53706, USA; Evolutionary Studies Institute and Centre for Excellence in PalaeoSciences, University of the Witwatersrand, Private Bag 3, Wits, 2050, South Africa
| | - Lee R Berger
- Evolutionary Studies Institute and Centre for Excellence in PalaeoSciences, University of the Witwatersrand, Private Bag 3, Wits, 2050, South Africa
| | - Jeremy M DeSilva
- Department of Anthropology, Dartmouth College, 409 Silsby, HB 6047, Hanover, USA; Evolutionary Studies Institute and Centre for Excellence in PalaeoSciences, University of the Witwatersrand, Private Bag 3, Wits, 2050, South Africa
| | - Damiano Marchi
- Department of Biology, University of Pisa, vis Derna 1, Pisa, 56126, Italy; Evolutionary Studies Institute and Centre for Excellence in PalaeoSciences, University of the Witwatersrand, Private Bag 3, Wits, 2050, South Africa.
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29
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Klein RG. Population structure and the evolution of
Homo sapiens
in Africa. Evol Anthropol 2019; 28:179-188. [DOI: 10.1002/evan.21788] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2018] [Revised: 05/27/2019] [Accepted: 06/04/2019] [Indexed: 01/01/2023]
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30
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de Ruiter DJ, Laird MF, Elliott M, Schmid P, Brophy J, Hawks J, Berger LR. Homo naledi cranial remains from the Lesedi chamber of the rising star cave system, South Africa. J Hum Evol 2019; 132:1-14. [PMID: 31203841 DOI: 10.1016/j.jhevol.2019.03.019] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2018] [Revised: 03/19/2019] [Accepted: 03/30/2019] [Indexed: 11/30/2022]
Abstract
Excavations in the Lesedi Chamber (U.W. 102) of the Rising Star cave system from 2013 to 2015 resulted in the recovery of 131 fossils representing at least three individuals attributed to Homo naledi. Hominin fossils were recovered from three collection areas within the Lesedi Chamber. A partial skull with near complete dentition (LES1) and an associated partial skeleton were recovered from Area 102a, while craniodental remains from two other individuals were recovered from Areas 102b and 102c. Here we present detailed anatomical descriptions and metrical comparisons of the Lesedi Chamber H. naledi craniodental remains that preserve diagnostic morphology. The LES1 skull is a presumed male that is slightly larger in size, and shows greater development of ectocranial structures compared to other H. naledi specimens from the Dinaledi Chamber of the Rising Star cave system. Otherwise the Lesedi fossils are notably similar to the Dinaledi fossils in shape and morphology. The Lesedi fossils also preserve the delicate nasal and lacrimal bones that are otherwise unrecorded in the Dinaledi sample. Limited morphological differences between the Dinaledi and Lesedi Chamber hominin samples provides support for the hypothesis that these two assemblages share a close phyletic relationship.
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Affiliation(s)
- Darryl J de Ruiter
- Department of Anthropology, Texas A&M University, College Station, TX 77843, USA; Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg 2050, South Africa.
| | - Myra F Laird
- Department of Organismal Biology and Anatomy, University of Chicago, Chicago, IL 60637, USA.
| | - Marina Elliott
- Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg 2050, South Africa.
| | - Peter Schmid
- Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg 2050, South Africa; Anthropological Institute and Museum, University of Zürich, Winterthurerstrasse 190, CH-8057 Zürich, Switzerland.
| | - Juliet Brophy
- Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg 2050, South Africa; Department of Geography and Anthropology, Louisiana State University, Baton Rouge, LA 70803, USA.
| | - John Hawks
- Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg 2050, South Africa; Department of Anthropology, University of Wisconsin - Madison, Madison, WI 53706, USA.
| | - Lee R Berger
- Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg 2050, South Africa.
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31
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Ragsdale AP, Gravel S. Models of archaic admixture and recent history from two-locus statistics. PLoS Genet 2019; 15:e1008204. [PMID: 31181058 PMCID: PMC6586359 DOI: 10.1371/journal.pgen.1008204] [Citation(s) in RCA: 35] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2019] [Revised: 06/20/2019] [Accepted: 05/17/2019] [Indexed: 11/18/2022] Open
Abstract
We learn about population history and underlying evolutionary biology through patterns of genetic polymorphism. Many approaches to reconstruct evolutionary histories focus on a limited number of informative statistics describing distributions of allele frequencies or patterns of linkage disequilibrium. We show that many commonly used statistics are part of a broad family of two-locus moments whose expectation can be computed jointly and rapidly under a wide range of scenarios, including complex multi-population demographies with continuous migration and admixture events. A full inspection of these statistics reveals that widely used models of human history fail to predict simple patterns of linkage disequilibrium. To jointly capture the information contained in classical and novel statistics, we implemented a tractable likelihood-based inference framework for demographic history. Using this approach, we show that human evolutionary models that include archaic admixture in Africa, Asia, and Europe provide a much better description of patterns of genetic diversity across the human genome. We estimate that an unidentified, deeply diverged population admixed with modern humans within Africa both before and after the split of African and Eurasian populations, contributing 4 - 8% genetic ancestry to individuals in world-wide populations.
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Affiliation(s)
- Aaron P Ragsdale
- Department of Human Genetics, McGill University, Montreal, QC, Canada
| | - Simon Gravel
- Department of Human Genetics, McGill University, Montreal, QC, Canada
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32
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Gonçalves A, Carvalho S. Death among primates: a critical review of non-human primate interactions towards their dead and dying. Biol Rev Camb Philos Soc 2019; 94:1502-1529. [PMID: 30950189 DOI: 10.1111/brv.12512] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2018] [Revised: 03/18/2019] [Accepted: 03/20/2019] [Indexed: 01/09/2023]
Abstract
For the past two centuries, non-human primates have been reported to inspect, protect, retrieve, carry or drag the dead bodies of their conspecifics and, for nearly the same amount of time, sparse scientific attention has been paid to such behaviours. Given that there exists a considerable gap in the fossil and archaeological record concerning how early hominins might have interacted with their dead, extant primates may provide valuable insight into how and in which contexts thanatological behaviours would have occurred. First, we outline a comprehensive history of comparative thanatology in non-human primates, from the earliest accounts to the present, uncovering the interpretations of previous researchers and their contributions to the field of primate thanatology. Many of the typical behavioural patterns towards the dead seen in the past are consistent with those observed today. Second, we review recent evidence of thanatological responses and organise it into distinct terminologies: direct interactions (physical contact with the corpse) and secondary interactions (guarding the corpse, vigils and visitations). Third, we provide a critical evaluation regarding the form and function of the behavioural and emotional aspects of these responses towards infants and adults, also comparing them with non-conspecifics. We suggest that thanatological interactions: promote a faster re-categorisation from living to dead, decrease costly vigilant/caregiving behaviours, are crucial to the management of grieving responses, update position in the group's hierarchy, and accelerate the formation of new social bonds. Fourth, we propose an integrated model of Life-Death Awareness, whereupon neural circuitry dedicated towards detecting life, i.e. the agency system (animate agency, intentional agency, mentalistic agency) works with a corresponding system that interacts with it on a decision-making level (animate/inanimate distinction, living/dead discrimination, death awareness). Theoretically, both systems are governed by specific cognitive mechanisms (perceptual categories, associative concepts and high-order reasoning, respectively). Fifth, we present an evolutionary timeline from rudimentary thanatological responses likely occurring in earlier non-human primates during the Eocene to the more elaborate mortuary practices attributed to genus Homo throughout the Pleistocene. Finally, we discuss the importance of detailed reports on primate thanatology and propose several empirical avenues to shed further light on this topic. This review expands and builds upon previous attempts to evaluate the body of knowledge on this subject, providing an integrative perspective and bringing together different fields of research to detail the evolutionary, sensory/cognitive, developmental and historical/archaeological aspects of primate thanatology. Considering all these findings and given their cognitive abilities, we argue that non-human primates are capable of an implicit awareness of death.
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Affiliation(s)
- André Gonçalves
- Language and Intelligence Section, Primate Research Institute, Kyoto University, Aichi, 484-8506, Japan
| | - Susana Carvalho
- Primate Models for Behavioural Evolution Lab, Institute of Cognitive and Evolutionary Anthropology, University of Oxford, Oxford, OX2 6PN, UK.,Interdisciplinary Centre for Archaeology and the Evolution of Human Behaviour (ICArEHB), University of Algarve, 8005-139, Faro, Portugal.,Centre for Functional Ecology, University of Coimbra, Calçada Martim de Freitas, 3000-456, Coimbra, Portugal
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33
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Enamel pearls: Their occurrence in recent human populations and earliest manifestation in the modern human lineage. Arch Oral Biol 2019; 101:147-155. [PMID: 30939297 DOI: 10.1016/j.archoralbio.2019.03.004] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2019] [Revised: 02/22/2019] [Accepted: 03/04/2019] [Indexed: 12/28/2022]
Abstract
OBJECTIVE To document and describe the occurrence of an enamel pearl on the distal root surface of the maxillary M3 of the fossil hominin specimen from Florisbad, South Africa that is dated to ca. 259,000 years B.P., and is an early representative of Homo sapiens or as a member of the evolutionary line that was directly ancestral to modern humans. DESIGN The molar was examined macroscopically and by micro-computed tomography (μCT) to enable accurate measurement and visualization of the structure of the enamel pearl. RESULTS The single pearl has a diameter of 0.97 mm; it is a Type 2 "composite" pearl comprising an enamel cap and dentine core without pulp chamber involvement. The size of the Florisbad pearl falls within or just below the size ranges of this anomaly in modern human samples. Type 2 pearls are most commonly encountered in recent human populations, and the location of the pearl on the distal root surface of the Florisbad M3 is consistent with its most frequent location in recent humans. Pearls in recent human populations affect between 0.2-4.8% of individuals, and 1.7-6.8% of permanent molars. Pearls have been documented in several prehistoric human dentitions, and all examples are less than 4000 years old. CONCLUSIONS Enamel pearls have been associated with periodontal disease, but it is not possible to relate its presence to the advanced periodontal inflammation and alveolar bone loss in the Florisbad fossil. Florisbad presents the earliest evidence of this anomaly in the fossil record pertaining to modern humans.
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34
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Kupczik K, Delezene LK, Skinner MM. Mandibular molar root and pulp cavity morphology in Homo naledi and other Plio-Pleistocene hominins. J Hum Evol 2019; 130:83-95. [PMID: 31010546 DOI: 10.1016/j.jhevol.2019.03.007] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2018] [Revised: 03/05/2019] [Accepted: 03/06/2019] [Indexed: 12/31/2022]
Abstract
The craniomandibular morphology of Homo naledi shows variable resemblances with species across Homo, which confounds an easy assessment of its phylogenetic position. In terms of skull shape, H. naledi has its closest affinities with Homo erectus, while mandibular shape places it closer to early Homo. From a tooth crown perspective, the smaller molars of H. naledi make it distinct from early Homo and H. erectus. Here, we compare the mandibular molar root morphology of six H. naledi individuals from the Dinaledi Chamber to those of African and Eurasian Plio-Pleistocene fossil hominins (totalling 183 mandibular first, second and third molars). The analysis of five root metric variables (cervical plane area, root length, root cervix volume, root branch volume, and root surface area) derived from microCT reconstructions reveals that the molar roots of H. naledi are smaller than those of Homo habilis, Homo rudolfensis, and H. erectus, but that they resemble those of three Homo sp. specimens from Swartkrans and Koobi Fora in size and overall appearance. Moreover, though H. naledi molar roots are similar in absolute size to Pleistocene Homo sapiens, they differ from H. sapiens in having a larger root volume for a given cervical plane area and less taurodont roots; the root cervix-to-branch proportions of H. naledi are comparable to those of Australopithecus africanus and species of Paranthropus. H. naledi also shares a metameric root volume pattern (M2 > M3 > M1) with Australopithecus and Paranthropus but not with any of the other Homo species (M2 > M1 > M3). Our findings therefore concur with previous studies that found that H. naledi shares plesiomorphic features with early Homo, Australopithecus, and Paranthropus. While absolute molar root size aligns H. naledi with Homo from North and South Africa, it is distinguishable from these in terms of root volumetric proportions.
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Affiliation(s)
- Kornelius Kupczik
- Max Planck Weizmann Center for Integrative Archaeology and Anthropology, Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, 04103 Leipzig, Germany.
| | - Lucas K Delezene
- Department of Anthropology, University of Arkansas, 330 Old Main, Fayetteville, AR, 72701, USA; Evolutionary Studies Institute and Centre for Excellence in PaleoSciences, University of the Witwatersrand, South Africa
| | - Matthew M Skinner
- Evolutionary Studies Institute and Centre for Excellence in PaleoSciences, University of the Witwatersrand, South Africa; School of Anthropology and Conservation, University of Kent, Canterbury, UK; Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
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35
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Braga J, Zimmer V, Dumoncel J, Samir C, de Beer F, Zanolli C, Pinto D, Rohlf FJ, Grine FE. Efficacy of diffeomorphic surface matching and 3D geometric morphometrics for taxonomic discrimination of Early Pleistocene hominin mandibular molars. J Hum Evol 2019; 130:21-35. [PMID: 31010541 DOI: 10.1016/j.jhevol.2019.01.009] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2018] [Revised: 01/22/2019] [Accepted: 01/23/2019] [Indexed: 12/23/2022]
Abstract
Morphometric assessments of the dentition have played significant roles in hypotheses relating to taxonomic diversity among extinct hominins. In this regard, emphasis has been placed on the statistical appraisal of intraspecific variation to identify morphological criteria that convey maximum discriminatory power. Three-dimensional geometric morphometric (3D GM) approaches that utilize landmarks and semi-landmarks to quantify shape variation have enjoyed increasingly popular use over the past twenty-five years in assessments of the outer enamel surface (OES) and enamel-dentine junction (EDJ) of fossil molars. Recently developed diffeomorphic surface matching (DSM) methods that model the deformation between shapes have drastically reduced if not altogether eliminated potential methodological inconsistencies associated with the a priori identification of landmarks and delineation of semi-landmarks. As such, DSM has the potential to better capture the geometric details that describe tooth shape by accounting for both homologous and non-homologous (i.e., discrete) features, and permitting the statistical determination of geometric correspondence. We compare the discriminatory power of 3D GM and DSM in the evaluation of the OES and EDJ of mandibular permanent molars attributed to Australopithecus africanus, Paranthropus robustus and early Homo sp. from the sites of Sterkfontein and Swartkrans. For all three molars, classification and clustering scores demonstrate that DSM performs better at separating the A. africanus and P. robustus samples than does 3D GM. The EDJ provided the best results. P. robustus evinces greater morphological variability than A. africanus. The DSM assessment of the early Homo molar from Swartkrans reveals its distinctiveness from either australopith sample, and the "unknown" specimen from Sterkfontein (Stw 151) is notably more similar to Homo than to A. africanus.
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Affiliation(s)
- José Braga
- Computer-assisted Palaeoanthropology Team, UMR 5288 CNRS-Université de Toulouse (Paul Sabatier), 37 Allées Jules Guesde, 31000 Toulouse, France; Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg 2050, South Africa.
| | - Veronika Zimmer
- Department of Anatomy, Faculty of Health Sciences, University of Pretoria, Pretoria 0001, South Africa; Department of Biomedical Engineering, King's College London, London, UK.
| | - Jean Dumoncel
- Computer-assisted Palaeoanthropology Team, UMR 5288 CNRS-Université de Toulouse (Paul Sabatier), 37 Allées Jules Guesde, 31000 Toulouse, France.
| | - Chafik Samir
- LIMOS, UMR 6158 CNRS-Université Clermont Auvergne, 63173 Aubière, France.
| | - Frikkie de Beer
- South African Nuclear Energy Corporation (NECSA), Pelindaba, North West Province, South Africa.
| | - Clément Zanolli
- Computer-assisted Palaeoanthropology Team, UMR 5288 CNRS-Université de Toulouse (Paul Sabatier), 37 Allées Jules Guesde, 31000 Toulouse, France.
| | - Deborah Pinto
- Computer-assisted Palaeoanthropology Team, UMR 5288 CNRS-Université de Toulouse (Paul Sabatier), 37 Allées Jules Guesde, 31000 Toulouse, France.
| | - F James Rohlf
- Department of Anthropology, Stony Brook University, Stony Brook, NY 11794, USA.
| | - Frederick E Grine
- Department of Anthropology, Stony Brook University, Stony Brook, NY 11794, USA; Department of Anatomical Sciences, Stony Brook University, Stony Brook, NY 11794, USA.
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36
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Stelzer S, Neubauer S, Hublin JJ, Spoor F, Gunz P. Morphological trends in arcade shape and size in Middle Pleistocene Homo. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY 2018; 168:70-91. [PMID: 30351445 DOI: 10.1002/ajpa.23721] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2018] [Revised: 07/26/2018] [Accepted: 09/11/2018] [Indexed: 12/29/2022]
Abstract
OBJECTIVES Middle Pleistocene fossil hominins, often summarized as Homo heidelbergensis sensu lato, are difficult to interpret due to a fragmentary fossil record and ambiguous combinations of primitive and derived characters. Here, we focus on one aspect of facial shape and analyze shape variation of the dental arcades of these fossils together with other Homo individuals. MATERIALS AND METHODS Three-dimensional landmark data were collected on computed tomographic scans and surface scans of Middle Pleistocene fossil hominins (n = 8), Homo erectus s.l. (n = 4), Homo antecessor (n = 1), Homo neanderthalensis (n = 13), recent (n = 52) and fossil (n = 19) Homo sapiens. To increase sample size, we used multiple multivariate regression to reconstruct complementary arches for isolated mandibles, and explored size and shape differences among maxillary arcades. RESULTS The shape of the dental arcade in H. erectus s.l. and H. antecessor differs markedly from both Neanderthals and H. sapiens. The latter two show subtle but consistent differences in arcade length and width. Shape variation among Middle Pleistocene fossil hominins does not exceed the amount of variation of other species, but includes individuals with more primitive and more derived morphology, all more similar to Neanderthals and H. sapiens than to H. erectus s.l. DISCUSSION Although our results cannot reject the hypothesis that the Middle Pleistocene fossil hominins belong to a single species, their shape variation comprises a more primitive morph that represents a likely candidate for the shape of the last common ancestor of Neanderthals and H. sapiens, and a more derived morph resembling Neanderthals. The arcade shape difference between Neanderthals and H. sapiens might be related to different ways to withstand mechanical stress.
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Affiliation(s)
- Stefanie Stelzer
- Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
| | - Simon Neubauer
- Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
| | - Jean-Jacques Hublin
- Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
| | - Fred Spoor
- Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.,Department of Earth Sciences, The Natural History Museum, London, United Kingdom.,Department of Anthropology, University College London (UCL), London, United Kingdom
| | - Philipp Gunz
- Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
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Schlebusch CM, Jakobsson M. Tales of Human Migration, Admixture, and Selection in Africa. Annu Rev Genomics Hum Genet 2018; 19:405-428. [DOI: 10.1146/annurev-genom-083117-021759] [Citation(s) in RCA: 55] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
In the last three decades, genetic studies have played an increasingly important role in exploring human history. They have helped to conclusively establish that anatomically modern humans first appeared in Africa roughly 250,000–350,000 years before present and subsequently migrated to other parts of the world. The history of humans in Africa is complex and includes demographic events that influenced patterns of genetic variation across the continent. Through genetic studies, it has become evident that deep African population history is captured by relationships among African hunter–gatherers, as the world's deepest population divergences occur among these groups, and that the deepest population divergence dates to 300,000 years before present. However, the spread of pastoralism and agriculture in the last few thousand years has shaped the geographic distribution of present-day Africans and their genetic diversity. With today's sequencing technologies, we can obtain full genome sequences from diverse sets of extant and prehistoric Africans. The coming years will contribute exciting new insights toward deciphering human evolutionary history in Africa.
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Affiliation(s)
- Carina M. Schlebusch
- Human Evolution, Department of Organismal Biology, Uppsala University, SE-752 36 Uppsala, Sweden;,
- Centre for Anthropological Research and Department of Anthropology and Development Studies, University of Johannesburg, 2006 Johannesburg, South Africa
- SciLifeLab, SE-751 23 Uppsala, Sweden
| | - Mattias Jakobsson
- Human Evolution, Department of Organismal Biology, Uppsala University, SE-752 36 Uppsala, Sweden;,
- Centre for Anthropological Research and Department of Anthropology and Development Studies, University of Johannesburg, 2006 Johannesburg, South Africa
- SciLifeLab, SE-751 23 Uppsala, Sweden
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Neubauer S, Gunz P, Leakey L, Leakey M, Hublin JJ, Spoor F. Reconstruction, endocranial form and taxonomic affinity of the early Homo calvaria KNM-ER 42700. J Hum Evol 2018; 121:25-39. [DOI: 10.1016/j.jhevol.2018.04.005] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2017] [Revised: 04/03/2018] [Accepted: 04/04/2018] [Indexed: 12/23/2022]
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Description and analysis of three Homo naledi incudes from the Dinaledi Chamber, Rising Star cave (South Africa). J Hum Evol 2018; 122:146-155. [PMID: 30001870 DOI: 10.1016/j.jhevol.2018.06.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2018] [Revised: 06/20/2018] [Accepted: 06/21/2018] [Indexed: 11/22/2022]
Abstract
This study describes three incudes recovered from the Dinaledi Chamber in the Rising Star cave system in South Africa. All three bones were recovered during sieving of excavated sediments and likely represent three Homo naledi individuals. Morphologically and metrically, the Dinaledi ossicles resemble those of chimpanzees and Paranthropus robustus more than they do later members of the genus Homo, and fall outside of the modern human range of variation in several dimensions. Despite this, when overall size is considered, the functional lengths in H. naledi and P. robustus are very similar to those predicted for a human with a similar-sized incus. In this sense, both taxa seem to show a relatively elongated functional length, distinguishing them from chimpanzees. The functional length in H. naledi is slightly longer in absolute terms than in P. robustus, suggesting H. naledi may already show a slight increase in functional length compared with early hominins. While H. naledi lacks the more open angle between the long and short processes found in modern humans, considered a derived feature within the genus Homo, the value in H. naledi is similar to that predicted for a hominoid with a similar-sized incus. Principal components analysis of size-standardized variables shows H. naledi falling outside of the recent human range of variation, but within the confidence ellipse for gorillas. Phylogenetic polarity is complicated by the absence of incus data from early members of the genus Homo, but the generally primitive nature of the H. naledi incudes is consistent with other primitive features of the species, such as the very small cranial capacity. These ossicles add significantly to the understanding of incus variation in hominins and provide important new data on the morphology and taxonomic affinities of H. naledi.
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Odes EJ, Delezene LK, Randolph-Quinney PS, Smilg JS, Augustine TN, Jakata K, Berger LR. A case of benign osteogenic tumour in Homo naledi: Evidence for peripheral osteoma in the U.W. 101-1142 mandible. INTERNATIONAL JOURNAL OF PALEOPATHOLOGY 2018; 21:47-55. [PMID: 29778414 DOI: 10.1016/j.ijpp.2017.05.003] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2016] [Revised: 05/08/2017] [Accepted: 05/08/2017] [Indexed: 06/08/2023]
Abstract
The reported incidence of neoplasia in the extinct hominin record is rare. We describe here the first palaeopathological analysis of an osteogenic lesion in the extinct hominin Homo naledi from Dinaledi Cave (Rising Star), South Africa. The lesion presented as an irregular bony growth, found on the right lingual surface of the body of the adult mandible U.W. 101-1142. The growth was macroscopically evaluated and internally imaged using micro-focus x-ray computed tomography (μCT). A detailed description and differential diagnosis were undertaken using gross and micromorphology, and we conclude that the most probable diagnosis is peripheral osteoma - a benign osteogenic neoplasia. These tumours are cryptic in clinical expression, though they may present localised discomfort and swelling. It has been suggested that muscle traction may play a role in the development and expression of these tumours. The impact of this lesion on the individual affected is unknown. This study adds to the growing corpus of palaeopathological data from the South African fossil record, which suggests that the incidence of neoplastic disease in deep prehistory was more prevalent than traditionally accepted. The study also highlights the utility of micro-computed tomography in assisting accurate diagnoses of ancient pathologies.
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Affiliation(s)
- Edward J Odes
- School of Anatomical Sciences, Faculty of Health Sciences, University of the Witwatersrand Medical School, Parktown, Johannesburg, 2193, South Africa; Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg, South Africa.
| | - Lucas K Delezene
- Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg, South Africa; Department of Anthropology, University of Arkansas, Fayetteville, United States
| | - Patrick S Randolph-Quinney
- School of Anatomical Sciences, Faculty of Health Sciences, University of the Witwatersrand Medical School, Parktown, Johannesburg, 2193, South Africa; Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg, South Africa; School of Forensic and Applied Sciences, University of Central Lancashire, Preston, PR1 2HE, UK.
| | - Jacqueline S Smilg
- School of Radiation Sciences, University of the Witwatersrand, Johannesburg, South Africa; Department of Radiology, Charlotte Maxeke Academic Hospital, Johannesburg, South Africa
| | - Tanya N Augustine
- School of Anatomical Sciences, Faculty of Health Sciences, University of the Witwatersrand Medical School, Parktown, Johannesburg, 2193, South Africa
| | - Kudakwashe Jakata
- Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg, South Africa
| | - Lee R Berger
- Evolutionary Studies Institute, University of the Witwatersrand, Johannesburg, South Africa
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Abstract
The new species Homo naledi was discovered in 2013 in a remote cave chamber of the Rising Star cave system, South Africa. This species survived until between 226,000 and 335,000 y ago, placing it in continental Africa at the same time as the early ancestors of modern humans were arising. Yet, H. naledi was strikingly primitive in many aspects of its anatomy, including the small size of its brain. Here, we have provided a description of endocast anatomy of this primitive species. Despite its small brain size, H. naledi shared some aspects of human brain organization, suggesting that innovations in brain structure were ancestral within the genus Homo. Hominin cranial remains from the Dinaledi Chamber, South Africa, represent multiple individuals of the species Homo naledi. This species exhibits a small endocranial volume comparable to Australopithecus, combined with several aspects of external cranial anatomy similar to larger-brained species of Homo such as Homo habilis and Homo erectus. Here, we describe the endocast anatomy of this recently discovered species. Despite the small size of the H. naledi endocasts, they share several aspects of structure in common with other species of Homo, not found in other hominins or great apes, notably in the organization of the inferior frontal and lateral orbital gyri. The presence of such structural innovations in a small-brained hominin may have relevance to behavioral evolution within the genus Homo.
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Egeland CP, Domínguez-Rodrigo M, Pickering TR, Menter CG, Heaton JL. Hominin skeletal part abundances and claims of deliberate disposal of corpses in the Middle Pleistocene. Proc Natl Acad Sci U S A 2018; 115:4601-4606. [PMID: 29610322 PMCID: PMC5939076 DOI: 10.1073/pnas.1718678115] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Humans are set apart from other organisms by the realization of their own mortality. Thus, determining the prehistoric emergence of this capacity is of significant interest to understanding the uniqueness of the human animal. Tracing that capacity chronologically is possible through archaeological investigations that focus on physical markers that reflect "mortality salience." Among these markers is the deliberate and culturally mediated disposal of corpses. Some Neandertal bone assemblages are among the earliest reasonable claims for the deliberate disposal of hominins, but even these are vigorously debated. More dramatic assertions center on the Middle Pleistocene sites of Sima de los Huesos (SH, Spain) and the Dinaledi Chamber (DC, South Africa), where the remains of multiple hominin individuals were found in deep caves, and under reported taphonomic circumstances that seem to discount the possibility that nonhominin actors and processes contributed to their formation. These claims, with significant implications for charting the evolution of the "human condition," deserve scrutiny. We test these assertions through machine-learning analyses of hominin skeletal part representation in the SH and DC assemblages. Our results indicate that nonanthropogenic agents and abiotic processes cannot yet be ruled out as significant contributors to the ultimate condition of both collections. This finding does not falsify hypotheses of deliberate disposal for the SH and DC corpses, but does indicate that the data also support partially or completely nonanthropogenic formational histories.
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Affiliation(s)
- Charles P Egeland
- Department of Anthropology, The University of North Carolina at Greensboro, Greensboro, NC 27412;
| | - Manuel Domínguez-Rodrigo
- Department of Prehistory, Complutense University, 28040 Madrid, Spain
- Instituto de Evolución en África, University of Alcalá de Henares, 28010 Madrid, Spain
| | - Travis Rayne Pickering
- Department of Anthropology, University of Wisconsin-Madison, Madison, WI 53706
- Evolutionary Studies Institute, University of the Witwatersrand, 2050 Johannesburg, South Africa
- Plio-Pleistocene Palaeontology Section, Department of Vertebrates, Ditsong National Museum of Natural History (Transvaal Museum), 0001 Pretoria, South Africa
| | - Colin G Menter
- Department of Biology, University of Florence, 50122 Florence, Italy
| | - Jason L Heaton
- Evolutionary Studies Institute, University of the Witwatersrand, 2050 Johannesburg, South Africa
- Plio-Pleistocene Palaeontology Section, Department of Vertebrates, Ditsong National Museum of Natural History (Transvaal Museum), 0001 Pretoria, South Africa
- Department of Biology, Birmingham-Southern College, Birmingham, AL 35254
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Dental topography and the diet of Homo naledi. J Hum Evol 2018; 118:14-26. [DOI: 10.1016/j.jhevol.2018.02.006] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2017] [Revised: 02/05/2018] [Accepted: 02/08/2018] [Indexed: 11/20/2022]
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Akhilesh K, Pappu S, Rajapara HM, Gunnell Y, Shukla AD, Singhvi AK. Early Middle Palaeolithic culture in India around 385–172 ka reframes Out of Africa models. Nature 2018; 554:97-101. [DOI: 10.1038/nature25444] [Citation(s) in RCA: 52] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2017] [Accepted: 12/09/2017] [Indexed: 01/01/2023]
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Garvin HM, Elliott MC, Delezene LK, Hawks J, Churchill SE, Berger LR, Holliday TW. Body size, brain size, and sexual dimorphism in Homo naledi from the Dinaledi Chamber. J Hum Evol 2017; 111:119-138. [DOI: 10.1016/j.jhevol.2017.06.010] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2016] [Revised: 06/19/2017] [Accepted: 06/23/2017] [Indexed: 01/07/2023]
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Schlebusch CM, Malmström H, Günther T, Sjödin P, Coutinho A, Edlund H, Munters AR, Vicente M, Steyn M, Soodyall H, Lombard M, Jakobsson M. Southern African ancient genomes estimate modern human divergence to 350,000 to 260,000 years ago. Science 2017; 358:652-655. [PMID: 28971970 DOI: 10.1126/science.aao6266] [Citation(s) in RCA: 182] [Impact Index Per Article: 26.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2017] [Accepted: 09/20/2017] [Indexed: 12/14/2022]
Abstract
Southern Africa is consistently placed as a potential region for the evolution of Homo sapiens We present genome sequences, up to 13x coverage, from seven ancient individuals from KwaZulu-Natal, South Africa. The remains of three Stone Age hunter-gatherers (about 2000 years old) were genetically similar to current-day southern San groups, and those of four Iron Age farmers (300 to 500 years old) were genetically similar to present-day Bantu-language speakers. We estimate that all modern-day Khoe-San groups have been influenced by 9 to 30% genetic admixture from East Africans/Eurasians. Using traditional and new approaches, we estimate the first modern human population divergence time to between 350,000 and 260,000 years ago. This estimate increases the deepest divergence among modern humans, coinciding with anatomical developments of archaic humans into modern humans, as represented in the local fossil record.
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Affiliation(s)
- Carina M Schlebusch
- Department of Organismal Biology, Evolutionary Biology Centre, Uppsala University, Norbyvägen 18C, SE-752 36 Uppsala, Sweden.,Centre for Anthropological Research and Department of Anthropology and Development Studies, University of Johannesburg, Post Office Box 524, Auckland Park, 2006, South Africa
| | - Helena Malmström
- Department of Organismal Biology, Evolutionary Biology Centre, Uppsala University, Norbyvägen 18C, SE-752 36 Uppsala, Sweden.,Centre for Anthropological Research and Department of Anthropology and Development Studies, University of Johannesburg, Post Office Box 524, Auckland Park, 2006, South Africa
| | - Torsten Günther
- Department of Organismal Biology, Evolutionary Biology Centre, Uppsala University, Norbyvägen 18C, SE-752 36 Uppsala, Sweden
| | - Per Sjödin
- Department of Organismal Biology, Evolutionary Biology Centre, Uppsala University, Norbyvägen 18C, SE-752 36 Uppsala, Sweden
| | - Alexandra Coutinho
- Department of Organismal Biology, Evolutionary Biology Centre, Uppsala University, Norbyvägen 18C, SE-752 36 Uppsala, Sweden
| | - Hanna Edlund
- Department of Organismal Biology, Evolutionary Biology Centre, Uppsala University, Norbyvägen 18C, SE-752 36 Uppsala, Sweden
| | - Arielle R Munters
- Department of Organismal Biology, Evolutionary Biology Centre, Uppsala University, Norbyvägen 18C, SE-752 36 Uppsala, Sweden
| | - Mário Vicente
- Department of Organismal Biology, Evolutionary Biology Centre, Uppsala University, Norbyvägen 18C, SE-752 36 Uppsala, Sweden
| | - Maryna Steyn
- Human Variation and Identification Research Unit, School of Anatomical Sciences, Faculty of Health Sciences, University of the Witwatersrand, South Africa
| | - Himla Soodyall
- Division of Human Genetics, School of Pathology, Faculty of Health Sciences, University of the Witwatersrand and National Health Laboratory Service, Johannesburg, South Africa
| | - Marlize Lombard
- Centre for Anthropological Research and Department of Anthropology and Development Studies, University of Johannesburg, Post Office Box 524, Auckland Park, 2006, South Africa. .,Stellenbosch Institute for Advanced Study (STIAS), Wallenberg Research Centre at Stellenbosch University, Marais Street, Stellenbosch, 7600, South Africa
| | - Mattias Jakobsson
- Department of Organismal Biology, Evolutionary Biology Centre, Uppsala University, Norbyvägen 18C, SE-752 36 Uppsala, Sweden. .,Centre for Anthropological Research and Department of Anthropology and Development Studies, University of Johannesburg, Post Office Box 524, Auckland Park, 2006, South Africa.,Science for Life Laboratory (SciLife Lab), Uppsala, Sweden
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48
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50
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Wild S. Small-brained early human lived more recently than expected. Nature 2017. [DOI: 10.1038/nature.2017.21961] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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